A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
A3 | Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |
aaSEA | Amino Acid Substitution Effect Analyser |
AATtools | Reliability and Scoring Routines for the Approach-Avoidance Task |
ABACUS | Apps Based Activities for Communicating and Understanding Statistics |
abbyyR | Access to Abbyy Optical Character Recognition (OCR) API |
abc | Tools for Approximate Bayesian Computation (ABC) |
abc.data | Data Only: Tools for Approximate Bayesian Computation (ABC) |
ABC.RAP | Array Based CpG Region Analysis Pipeline |
abcADM | Fit Accumulated Damage Models and Estimate Reliability using ABC |
ABCanalysis | Computed ABC Analysis |
abcdeFBA | ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package |
ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |
ABCp2 | Approximate Bayesian Computational Model for Estimating P2 |
abcrf | Approximate Bayesian Computation via Random Forests |
abcrlda | Asymptotically Bias-Corrected Regularized Linear Discriminant Analysis |
abctools | Tools for ABC Analyses |
abd | The Analysis of Biological Data |
abdiv | Alpha and Beta Diversity Measures |
abe | Augmented Backward Elimination |
abf2 | Load Gap-Free Axon ABF2 Files |
ABHgenotypeR | Easy Visualization of ABH Genotypes |
abind | Combine Multidimensional Arrays |
abjutils | Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association |
abnormality | Measure a Subject's Abnormality with Respect to a Reference Population |
abodOutlier | Angle-Based Outlier Detection |
ABPS | The Abnormal Blood Profile Score to Detect Blood Doping |
AbsFilterGSEA | Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering |
AbSim | Time Resolved Simulations of Antibody Repertoires |
abstractr | An R-Shiny Application for Creating Visual Abstracts |
abtest | Bayesian A/B Testing |
Ac3net | Inferring Directional Conservative Causal Core Gene Networks |
ACA | Abrupt Change-Point or Aberration Detection in Point Series |
acc | Exploring Accelerometer Data |
accelerometry | Functions for Processing Accelerometer Data |
accelmissing | Missing Value Imputation for Accelerometer Data |
accept | The Acute COPD Exacerbation Prediction Tool (ACCEPT) |
AcceptanceSampling | Creation and Evaluation of Acceptance Sampling Plans |
ACCLMA | ACC & LMA Graph Plotting |
accrual | Bayesian Accrual Prediction |
accrued | Data Quality Visualization Tools for Partially Accruing Data |
accSDA | Accelerated Sparse Discriminant Analysis |
ACD | Categorical data analysis with complete or missing responses |
ACDm | Tools for Autoregressive Conditional Duration Models |
ace2fastq | ACE File to FASTQ Converter |
acebayes | Optimal Bayesian Experimental Design using the ACE Algorithm |
acepack | ACE and AVAS for Selecting Multiple Regression Transformations |
ACEt | Estimating Dynamic Heritability and Twin Model Comparison |
acfMPeriod | Robust Estimation of the ACF from the M-Periodogram |
acid | Analysing Conditional Income Distributions |
acm4r | Align-and-Count Method comparisons of RFLP data |
acmeR | Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines |
ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |
acnr | Annotated Copy-Number Regions |
acopula | Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas |
AcousticNDLCodeR | Coding Sound Files for Use with NDL |
acp | Autoregressive Conditional Poisson |
aCRM | Convenience functions for analytical Customer Relationship Management |
AcrossTic | A Cost-Minimal Regular Spanning Subgraph with TreeClust |
acrt | Autocorrelation Robust Testing |
acs | Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census |
ACSNMineR | Gene Enrichment Analysis from ACSN Maps or GMT Files |
acss | Algorithmic Complexity for Short Strings |
acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |
ACSWR | A Companion Package for the Book "A Course in Statistics with R" |
ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |
ActCR | Extract Circadian Rhythms Metrics from Actigraphy Data |
actel | Acoustic Telemetry Data Analysis |
ActFrag | Activity Fragmentation Metrics Extracted from Minute Level Activity Data |
Actigraphy | Actigraphy Data Analysis |
ActiveDriver | Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites |
ActiveDriverWGS | A Driver Discovery Tool for Cancer Whole Genomes |
activegp | Gaussian Process Based Design and Analysis for the Active Subspace Method |
ActivePathways | Integrative Pathway Enrichment Analysis of Multivariate Omics Data |
activity | Animal Activity Statistics |
activityCounts | Generate ActiLife Counts |
activPAL | Advanced Processing and Chart Generation from activPAL Events Files |
activpalProcessing | Process activPAL Events Files |
actogrammr | Read in Activity Data and Plot Actograms |
actuar | Actuarial Functions and Heavy Tailed Distributions |
actuaryr | Develop Actuarial Models |
AcuityView | A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity |
ada | The R Package Ada for Stochastic Boosting |
adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |
adagio | Discrete and Global Optimization Routines |
adamethods | Archetypoid Algorithms and Anomaly Detection |
AdapEnetClass | A Class of Adaptive Elastic Net Methods for Censored Data |
adapr | Implementation of an Accountable Data Analysis Process |
AdapSamp | Adaptive Sampling Algorithms |
adapt4pv | Adaptive Approaches for Signal Detection in Pharmacovigilance |
adaptalint | Check Code Style Painlessly |
AdaptFit | Adaptive Semiparametic Regression |
AdaptFitOS | Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests |
AdaptGauss | Gaussian Mixture Models (GMM) |
adaptiveGPCA | Adaptive Generalized PCA |
AdaptiveSparsity | Adaptive Sparsity Models |
adaptivetau | Tau-Leaping Stochastic Simulation |
adaptMCMC | Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler |
adaptMT | Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information |
ADAPTS | Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells |
adaptsmoFMRI | Adaptive Smoothing of FMRI Data |
adaptTest | Adaptive two-stage tests |
AdaSampling | Adaptive Sampling for Positive Unlabeled and Label Noise Learning |
ADCT | Adaptive Design in Clinical Trials |
add2ggplot | Add to 'ggplot2' |
addhaz | Binomial and Multinomial Additive Hazard Models |
addhazard | Fit Additive Hazards Models for Survival Analysis |
addinsJoaoMelo | Addins Made of Joao Melo |
addinslist | Discover and Install Useful RStudio Addins |
addinsOutline | 'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project |
additiveDEA | Additive Data Envelopment Analysis Models |
additivityTests | Additivity Tests in the Two Way Anova with Single Sub-class Numbers |
addreg | Additive Regression for Discrete Data |
addScales | Adds Labeled Center Line and Scale Lines/Regions to Trellis Plots |
ADDT | Analysis of Accelerated Destructive Degradation Test Data |
ade4 | Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences |
ade4TkGUI | 'ade4' Tcl/Tk Graphical User Interface |
adeba | Adaptive Density Estimation by Bayesian Averaging |
adegenet | Exploratory Analysis of Genetic and Genomic Data |
adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |
adehabitatHR | Home Range Estimation |
adehabitatHS | Analysis of Habitat Selection by Animals |
adehabitatLT | Analysis of Animal Movements |
adehabitatMA | Tools to Deal with Raster Maps |
adephylo | Exploratory Analyses for the Phylogenetic Comparative Method |
adepro | A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles |
adept | Adaptive Empirical Pattern Transformation |
adeptdata | Accelerometry Data Sets |
AdequacyModel | Adequacy of Probabilistic Models and General Purpose Optimization |
adespatial | Multivariate Multiscale Spatial Analysis |
adfExplorer | Import from and Export to Amiga Disk Files |
ADGofTest | Anderson-Darling GoF test |
AdhereR | Adherence to Medications |
AdhereRViz | Interactive Visualisation of Medication Adherence Patterns |
adhoc | Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification |
adimpro | Adaptive Smoothing of Digital Images |
adiv | Analysis of Diversity |
AdjBQR | Adjusted Bayesian Quantile Regression Inference |
adjclust | Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix |
adjustedcranlogs | Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs |
adklakedata | Adirondack Long-Term Lake Data |
adlift | An Adaptive Lifting Scheme Algorithm |
admisc | Adrian Dusa's Miscellaneous |
AdMit | Adaptive Mixture of Student-t Distributions |
admixr | An Interface for Running 'ADMIXTOOLS' Analyses |
admixturegraph | Admixture Graph Manipulation and Fitting |
ADMM | Algorithms using Alternating Direction Method of Multipliers |
admmDensestSubmatrix | Alternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem |
ADMMnet | Regularized Model with Selecting the Number of Non-Zeros |
ADMMsigma | Penalized Precision Matrix Estimation via ADMM |
adnuts | No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models |
adoption | Modelling Adoption Process in Marketing |
adoptr | Adaptive Optimal Two-Stage Designs in R |
ADPclust | Fast Clustering Using Adaptive Density Peak Detection |
ADPF | Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay |
adpss | Design and Analysis of Locally or Globally Efficient Adaptive Designs |
AdvBinomApps | Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information |
advclust | Object Oriented Advanced Clustering |
AdvDif4 | Solving 1D Advection Bi-Flux Diffusion Equation |
adventr | Interactive R Tutorials to Accompany Field (2016), "An Adventure in Statistics" |
adwave | Wavelet Analysis of Genomic Data from Admixed Populations |
adwordsR | Access the 'Google Adwords' API |
AEDForecasting | Change Point Analysis in ARIMA Forecasting |
AEenrich | Adverse Event Enrichment Tests |
aemo | Download and Process AEMO Price and Demand Data |
AER | Applied Econometrics with R |
AeRobiology | A Computational Tool for Aerobiological Data |
AF | Model-Based Estimation of Confounder-Adjusted Attributable Fractions |
afc | Generalized Discrimination Score |
afCEC | Active Function Cross-Entropy Clustering |
afex | Analysis of Factorial Experiments |
affluenceIndex | Affluence Indices |
AFheritability | The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors |
AFM | Atomic Force Microscope Image Analysis |
afmToolkit | Functions for Atomic Force Microscope Force-Distance Curves Analysis |
afpt | Tools for Modelling of Animal Flight Performance |
aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |
AGD | Analysis of Growth Data |
aGE | Adaptive Set-Based Gene-Environment Interaction Test for Rare Variants |
AggregateR | Aggregate Numeric, Date and Categorical Variables by an ID |
aggregation | p-Value Aggregation Methods |
AGHmatrix | Relationship Matrices for Diploid and Autopolyploid Species |
agop | Aggregation Operators and Preordered Sets |
AGread | Read Data Files from ActiGraph Monitors |
agRee | Various Methods for Measuring Agreement |
AgreementInterval | Agreement Interval of Two Measurement Methods |
agricolae | Statistical Procedures for Agricultural Research |
agridat | Agricultural Datasets |
agriTutorial | Tutorial Analysis of Some Agricultural Experiments |
agriwater | Evapotranspiration and Energy Fluxes Spatial Analysis |
agrmt | Calculate Agreement or Consensus in Ordered Rating Scales |
agroclim | Climatic Indices for Agriculture |
agrostab | Stability Analysis for Agricultural Research |
AGSDest | Estimation in Adaptive Group Sequential Trials |
agsemisc | Miscellaneous plotting and utility functions |
ahaz | Regularization for semiparametric additive hazards regression |
AHM | Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments |
AHMbook | Functions and Data for the Book "Applied Hierarchical Modeling in Ecology" Vols 1 and 2 |
ahnr | An Implementation of the Artificial Hydrocarbon Networks |
AhoCorasickTrie | Fast Searching for Multiple Keywords in Multiple Texts |
ahp | Analytic Hierarchy Process |
ahpsurvey | Analytic Hierarchy Process for Survey Data |
aibd | Attraction Indian Buffet Distribution |
AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |
AID | Box-Cox Power Transformation |
aidar | Tools for Reading AIDA Files |
aif360 | Help Detect and Mitigate Bias in Machine Learning Models |
AIG | Automatic Item Generator |
AIM | AIM: adaptive index model |
aimPlot | Create Pie Like Plot for Completeness |
aimsir17 | Irish Weather Observing Stations Hourly Records for 2017 |
aire.zmvm | Download Mexico City Pollution, Wind, and Temperature Data |
airGR | Suite of GR Hydrological Models for Precipitation-Runoff Modelling |
airGRteaching | Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) |
aiRly | R Wrapper for 'Airly' API |
airportr | Convenience Tools for Working with Airport Data |
airports | Data on Airports |
airqualityES | Air Quality Measurements in Spain from 2011 to 2018 |
airr | AIRR Data Representation Reference Library |
airt | Evaluation of Algorithm Collections Using Item Response Theory |
aiRthermo | Atmospheric Thermodynamics and Visualization |
ajv | Another JSON Schema Validator |
akc | Automatic Knowledge Classification |
Ake | Associated Kernel Estimations |
akima | Interpolation of Irregularly and Regularly Spaced Data |
akmeans | Adaptive Kmeans algorithm based on threshold |
akmedoids | Anchored Kmedoids for Longitudinal Data Clustering |
ALA4R | Atlas of Living Australia (ALA) Data and Resources in R |
alabama | Constrained Nonlinear Optimization |
alakazam | Immunoglobulin Clonal Lineage and Diversity Analysis |
ALassoSurvIC | Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data |
albopictus | Age-Structured Population Dynamics Model |
ald | The Asymmetric Laplace Distribution |
ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |
ALEPlot | Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots |
aLFQ | Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data |
alfr | Connectivity to 'Alfresco' Content Management Repositories |
alfred | Downloading Time Series from ALFRED Database for Various Vintages |
algaeClassify | Determine Phytoplankton Functional Groups Based on Functional Traits |
AlgDesign | Algorithmic Experimental Design |
AlgebraicHaploPackage | Haplotype Two Snips Out of a Paired Group of Patients |
algo | Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library |
algorithmia | Allows you to Easily Interact with the Algorithmia Platform |
aliases2entrez | Converts Human gene symbols to entrez IDs |
alignfigR | Visualizing Multiple Sequence Alignments with 'ggplot2' |
alineR | Alignment of Phonetic Sequences Using the 'ALINE' Algorithm |
allan | Automated Large Linear Analysis Node |
alleHap | Allele Imputation and Haplotype Reconstruction from Pedigree Databases |
allelematch | Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present |
AlleleRetain | Allele Retention, Inbreeding, and Demography |
allelic | A fast, unbiased and exact allelic exact test |
allestimates | Effect Estimates from All Models |
AllPossibleSpellings | Computes all of a word's possible spellings |
alluvial | Alluvial Diagrams |
almanac | Tools for Working with Recurrence Rules |
alookr | Model Classifier for Binary Classification |
alpaca | Fit GLM's with High-Dimensional k-Way Fixed Effects |
alphabetr | Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells |
alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |
alphaOutlier | Obtain Alpha-Outlier Regions for Well-Known Probability Distributions |
AlphaPart | Partition/Decomposition of Breeding Values by Paths of Information |
alphashape3d | Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud |
AlphaSimR | Breeding Program Simulations |
alphastable | Inference for Stable Distribution |
AlphaVantageClient | Wrapper for Alpha Vantage API |
alphavantager | Lightweight R Interface to the Alpha Vantage API |
alr3 | Data to Accompany Applied Linear Regression 3rd Edition |
alr4 | Data to Accompany Applied Linear Regression 4th Edition |
ALS | Multivariate Curve Resolution Alternating Least Squares (MCR-ALS) |
ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |
ALSM | Companion to Applied Linear Statistical Models |
altair | Interface to 'Altair' |
altmeta | Alternative Meta-Analysis Methods |
ALTopt | Optimal Experimental Designs for Accelerated Life Testing |
altR2 | Alternative Estimators to Adjusted R-Squared |
amap | Another Multidimensional Analysis Package |
AMAP.Seq | Compare Gene Expressions from 2-Treatment RNA-Seq Experiments |
ambhasGW | Ground Water Modelling |
ambient | A Generator of Multidimensional Noise |
AMCP | A Model Comparison Perspective |
AMCTestmakeR | Generate LaTeX Code for Auto-Multiple-Choice (AMC) |
ameco | European Commission Annual Macro-Economic (AMECO) Database |
Amelia | A Program for Missing Data |
amelie | Anomaly Detection with Normal Probability Functions |
amen | Additive and Multiplicative Effects Models for Networks and Relational Data |
AmericanCallOpt | This package includes pricing function for selected American call options with underlying assets that generate payouts |
amerika | American Politics-Inspired Color Palette Generator |
AmesHousing | The Ames Iowa Housing Data |
AMGET | Post-processing tool for ADAPT 5 |
AmigaFFH | Commodore Amiga File Format Handler |
aml | Adaptive Mixed LASSO |
ammistability | Additive Main Effects and Multiplicative Interaction Model Stability Parameters |
AMModels | Adaptive Management Model Manager |
AmmoniaConcentration | Un-Ionized Ammonia Concentration |
aMNLFA | Automated Fitting of Moderated Nonlinear Factor Analysis Through the 'Mplus' Program |
AMOEBA | A Multidirectional Optimum Ecotope-Based Algorithm |
AMORE | Artificial Neural Network Training and Simulating |
AmostraBrasil | Generates Samples or Complete List of Brazilian IBGE (Instituto Brasileiro De Geografia e Estatistica) Census Households, Geocoding it by Google Maps |
ampd | An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals |
AmpGram | Prediction of Antimicrobial Peptides |
ampir | Predict Antimicrobial Peptides |
AMPLE | Common Code for the 'AMPED' and 'PIMPLE' 'shiny' Apps for Stakeholder Engagement and Harvest Strategies |
AmpliconDuo | Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts |
AMR | Antimicrobial Resistance Analysis |
amt | Animal Movement Tools |
AmyloGram | Prediction of Amyloid Proteins |
AnaCoDa | Analysis of Codon Data under Stationarity using a Bayesian Framework |
anacor | Simple and Canonical Correspondence Analysis |
analogsea | Interface to 'Digital Ocean' |
analogue | Analogue and Weighted Averaging Methods for Palaeoecology |
analogueExtra | Additional Functions for Use with the Analogue Package |
analysisPipelines | Compose Interoperable Analysis Pipelines & Put Them in Production |
analyz | Model Layer for Automatic Data Analysis via CSV File Interpretation |
AnalyzeFMRI | Functions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format |
analyzer | Data Analysis and Automated R Notebook Generation |
anapuce | Tools for Microarray Data Analysis |
AncestryMapper | Assigning Ancestry Based on Population References |
anchors | Statistical analysis of surveys with anchoring vignettes |
AnDE | An extended Bayesian Learning Technique developed by Dr. Geoff Webb |
andrews | Andrews curves |
Andromeda | Asynchronous Disk-Based Representation of Massive Data |
anesrake | ANES Raking Implementation |
AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |
anglr | Mesh Topology and Visualization for Spatial Data |
angstroms | Tools for 'ROMS' the Regional Ocean Modeling System |
aniDom | Inferring Dominance Hierarchies and Estimating Uncertainty |
anim.plots | Simple Animated Plots for R |
AnimalHabitatNetwork | Networks Characterising the Physical Configurations of Animal Habitats |
animalTrack | Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data |
animaltracker | Animal Tracker |
animation | A Gallery of Animations in Statistics and Utilities to Create Animations |
anipaths | Animation of Observed Trajectories Using Spline-Based Interpolation |
aniview | Animate Shiny and R Markdown Content when it Comes into View |
anMC | Compute High Dimensional Orthant Probabilities |
ANN2 | Artificial Neural Networks for Anomaly Detection |
AnnotationBustR | Extract Subsequences from GenBank Annotations |
AnnotLists | AnnotLists: A tool to annotate multiple lists from a specific annotation file |
AnnuityRIR | Annuity Random Interest Rates |
anocva | A Non-Parametric Statistical Test to Compare Clustering Structures |
anoint | Analysis of Interactions |
ANOM | Analysis of Means |
anomalize | Tidy Anomaly Detection |
anominate | Alpha-NOMINATE Ideal Point Estimator |
ANOVAIREVA | Interactive Document for Working with Analysis of Variance |
ANOVAreplication | Test ANOVA Replications by Means of the Prior Predictive p-Value |
ANOVAShiny | Interactive Document for Working with Analysis of Variance |
AntAngioCOOL | Anti-Angiogenic Peptide Prediction |
antaresEditObject | Edit an 'Antares' Simulation |
antaresProcessing | 'Antares' Results Processing |
antaresRead | Import, Manipulate and Explore the Results of an 'Antares' Simulation |
antaresViz | Antares Visualizations |
anthro | Computation of the WHO Child Growth Standards |
AnthropMMD | An R Package for Smith's Mean Measure of Divergence (MMD) |
Anthropometry | Statistical Methods for Anthropometric Data |
anticlust | Subset Partitioning via Anticlustering |
antitrust | Tools for Antitrust Practitioners |
antiword | Extract Text from Microsoft Word Documents |
AntWeb | programmatic interface to the AntWeb |
anyflights | Query 'nycflights13'-Like Air Travel Data for Given Years and Airports |
anyLib | Install and Load Any Package from CRAN, Bioconductor or Github |
anytime | Anything to 'POSIXct' or 'Date' Converter |
aod | Analysis of Overdispersed Data |
aods3 | Analysis of Overdispersed Data using S3 Methods |
aof | Ontogenetic Shifts in Central-Place Foraging Insects |
aoos | Another Object Orientation System |
Aoptbdtvc | A-Optimal Block Designs for Comparing Test Treatments with Controls |
aoristic | Generates Aoristic Probability Distributions |
aos | Animate on Scroll Library for 'shiny' |
apa | Format Outputs of Statistical Tests According to APA Guidelines |
ApacheLogProcessor | Process the Apache Web Server Log Files |
apaTables | Create American Psychological Association (APA) Style Tables |
apaText | Create R Markdown Text for Results in the Style of the American Psychological Association (APA) |
apc | Age-Period-Cohort Analysis |
APCanalysis | Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons |
apcf | Adapted Pair Correlation Function |
apcluster | Affinity Propagation Clustering |
aPCoA | Covariate Adjusted PCoA Plot |
apdesign | An Implementation of the Additive Polynomial Design Matrix |
ape | Analyses of Phylogenetics and Evolution |
apercu | Quick Look at your Data |
apex | Phylogenetic Methods for Multiple Gene Data |
apexcharter | Create Interactive Chart with the JavaScript 'ApexCharts' Library |
APFr | Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation |
APfun | Geo-Processing Helper Functions |
aphid | Analysis with Profile Hidden Markov Models |
APIS | Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents |
aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) |
aplot | Decorate a 'ggplot' with Associated Information |
aplpack | Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others |
APML0 | Augmented and Penalized Minimization Method L0 |
apmsWAPP | Pre- and Postprocessing for AP-MS data analysis based on spectral counts |
apng | Convert Png Files into Animated Png |
apollo | Tools for Choice Model Estimation and Application |
APPEstimation | Adjusted Prediction Model Performance Estimation |
apple | Approximate Path for Penalized Likelihood Estimators |
applicable | A Compilation of Applicability Domain Methods |
AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |
appnn | Amyloid Propensity Prediction Neural Network |
approximator | Bayesian Prediction of Complex Computer Codes |
approxmatch | Approximately Optimal Fine Balance Matching with Multiple Groups |
aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998) |
apricom | Tools for the a Priori Comparison of Regression Modelling Strategies |
aprof | Amdahl's Profiler, Directed Optimization Made Easy |
APSIM | General Utility Functions for the 'Agricultural Production Systems Simulator' |
APSIMBatch | Analysis the output of Apsim software |
apsimx | Inspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic |
apsrtable | apsrtable model-output formatter for social science |
apt | Asymmetric Price Transmission |
APtools | Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times |
apTreeshape | Analyses of Phylogenetic Treeshape |
apyramid | Visualize Population Pyramids Aggregated by Age |
AQLSchemes | Retrieving Acceptance Sampling Schemes |
aqp | Algorithms for Quantitative Pedology |
AQuadtree | Confidentiality of Spatial Point Data |
AquaEnv | Integrated Development Toolbox for Aquatic Chemical Model Generation |
AR | Another Look at the Acceptance-Rejection Method |
ar.matrix | Simulate Auto Regressive Data from Precision Matricies |
arabicStemR | Arabic Stemmer for Text Analysis |
ArArRedux | Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data |
arc | Association Rule Classification |
ARCensReg | Fitting Univariate Censored Linear Regression Model with Autoregressive Errors |
ArchaeoChron | Bayesian Modeling of Archaeological Chronologies |
ArchaeoPhases | Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal' |
ArchaeoPhases.dataset | Data Sets for 'ArchaeoPhases' Vignettes |
archdata | Example Datasets from Archaeological Research |
archetypal | Finds the Archetypal Analysis of a Data Frame |
archetypes | Archetypal Analysis |
archiDART | Plant Root System Architecture Analysis Using DART and RSML Files |
archivist | Tools for Storing, Restoring and Searching for R Objects |
archivist.github | Tools for Archiving, Managing and Sharing R Objects via GitHub |
ArCo | Artificial Counterfactual Package |
ARCokrig | Autoregressive Cokriging Models for Multifidelity Codes |
arcos | Load ARCOS Prescription Data Prepared by the Washington Post |
ArDec | Time series autoregressive-based decomposition |
ARDL | ARDL, ECM and Bounds-Test for Cointegration |
areal | Areal Weighted Interpolation |
arealDB | Harmonise and Integrate Heterogeneous Areal Data |
areaplot | Plot Stacked Areas and Confidence Bands as Filled Polygons |
arena2r | Plots, Summary Statistics and Tools for Arena Simulation Users |
arenar | Arena for the Exploration and Comparison of any ML Models |
arfima | Fractional ARIMA (and Other Long Memory) Time Series Modeling |
argo | Accurate Estimation of Influenza Epidemics using Google Search Data |
argon2 | Secure Password Hashing |
argonDash | Argon Shiny Dashboard Template |
argonR | R Interface to Argon HTML Design |
argosfilter | Argos locations filter |
argparse | Command Line Optional and Positional Argument Parser |
argparser | Command-Line Argument Parser |
ArgumentCheck | Improved Communication to Users with Respect to Problems in Function Arguments |
ARHT | Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data |
ari | Automated R Instructor |
ARIbrain | All-Resolution Inference |
aricode | Efficient Computations of Standard Clustering Comparison Measures |
ariExtra | Tools for Creating Automated Courses |
arkdb | Archive and Unarchive Databases Using Flat Files |
arkhe | Representation of Archaeological Data |
arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |
armada | A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence |
armspp | Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' |
arnie | "Arnie" box office records 1982-2014 |
AROC | Covariate-Adjusted Receiver Operating Characteristic Curve Inference |
aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |
aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |
aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |
aroma.core | Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework |
Arothron | Geometric Morphometrics Analysis and Virtual Anthropology |
ARpLMEC | Fitting Autoregressive Censored Mixed-Effects Models |
ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |
arpr | Advanced R Pipes |
aRpsDCA | Arps Decline Curve Analysis in R |
arrangements | Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions |
arrApply | Apply a Function to a Margin of an Array |
ArrayBin | Binarization of numeric data arrays |
arrayhelpers | Convenience Functions for Arrays |
arrow | Integration to 'Apache' 'Arrow' |
ars | Adaptive Rejection Sampling |
arse | Area of Resilience to Stress Event |
arsenal | An Arsenal of 'R' Functions for Large-Scale Statistical Summaries |
ART | Aligned Rank Transform for Nonparametric Factorial Analysis |
artfima | ARTFIMA Model Estimation |
ARTool | Aligned Rank Transform |
ARTP2 | Pathway and Gene-Level Association Test |
arules | Mining Association Rules and Frequent Itemsets |
arulesCBA | Classification Based on Association Rules |
arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |
arulesSequences | Mining Frequent Sequences |
arulesViz | Visualizing Association Rules and Frequent Itemsets |
aRxiv | Interface to the arXiv API |
asaur | Data Sets for "Applied Survival Analysis Using R"" |
asbio | A Collection of Statistical Tools for Biologists |
ascii | Export R Objects to Several Markup Languages |
asciicast | Create 'Ascii' Screen Casts from R Scripts |
asciichartr | Lightweight ASCII Line Graphs |
asciiruler | Render an ASCII Ruler |
asciiSetupReader | Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas) |
asd | Simulations for Adaptive Seamless Designs |
asdreader | Reading ASD Binary Files in R |
ASGS.foyer | Interface to the Australian Statistical Geography Standard |
ash | David Scott's ASH Routines |
ashr | Methods for Adaptive Shrinkage, using Empirical Bayes |
asht | Applied Statistical Hypothesis Tests |
AsioHeaders | 'Asio' C++ Header Files |
ASIP | Automated Satellite Image Processing |
askpass | Safe Password Entry for R, Git, and SSH |
aslib | Interface to the Algorithm Selection Benchmark Library |
ASMap | Linkage Map Construction using the MSTmap Algorithm |
asnipe | Animal Social Network Inference and Permutations for Ecologists |
aspace | A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns |
ASPBay | Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data |
aSPC | An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors |
aspect | A General Framework for Multivariate Analysis with Optimal Scaling |
aspi | Analysis of Symmetry of Parasitic Infections |
aSPU | Adaptive Sum of Powered Score Test |
asremlPlus | Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences |
ASSA | Applied Singular Spectrum Analysis (ASSA) |
assertable | Verbose Assertions for Tabular Data (Data.frames and Data.tables) |
assertive | Readable Check Functions to Ensure Code Integrity |
assertive.base | A Lightweight Core of the 'assertive' Package |
assertive.code | Assertions to Check Properties of Code |
assertive.data | Assertions to Check Properties of Data |
assertive.data.uk | Assertions to Check Properties of Strings |
assertive.data.us | Assertions to Check Properties of Strings |
assertive.datetimes | Assertions to Check Properties of Dates and Times |
assertive.files | Assertions to Check Properties of Files |
assertive.matrices | Assertions to Check Properties of Matrices |
assertive.models | Assertions to Check Properties of Models |
assertive.numbers | Assertions to Check Properties of Numbers |
assertive.properties | Assertions to Check Properties of Variables |
assertive.reflection | Assertions for Checking the State of R |
assertive.sets | Assertions to Check Properties of Sets |
assertive.strings | Assertions to Check Properties of Strings |
assertive.types | Assertions to Check Types of Variables |
assertr | Assertive Programming for R Analysis Pipelines |
assertthat | Easy Pre and Post Assertions |
AssetCorr | Estimating Asset Correlations from Default Data |
AssetPricing | Optimal Pricing of Assets with Fixed Expiry Date |
assignPOP | Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework |
assignR | Infer Geographic Origin from Isotopic Data |
assist | A Suite of R Functions Implementing Spline Smoothing Techniques |
ASSISTant | Adaptive Subgroup Selection in Group Sequential Trials |
AssocAFC | Allele Frequency Comparison |
assocInd | Implements New and Existing Association Indices for Constructing Animal Social Networks |
ASSOCShiny | Interactive Document for Working with Association Rule Mining Analysis |
AssocTests | Genetic Association Studies |
assortnet | Calculate the Assortativity Coefficient of Weighted and Binary Networks |
AssotesteR | Statistical Tests for Genetic Association Studies |
AST | Age-Spatial-Temporal Model |
aster | Aster Models |
aster2 | Aster Models |
astrochron | A Computational Tool for Astrochronology |
astrodatR | Astronomical Data |
astroFns | Astronomy: time and position functions, misc. utilities |
astrolibR | Astronomy Users Library |
astsa | Applied Statistical Time Series Analysis |
asus | Adaptive SURE Thresholding Using Side Information |
asVPC | Average Shifted Visual Predictive Checks |
AsyK | Kernel Density Estimation and Selection of Optimum Bandwidth |
asymLD | Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data |
asymmetry | Multidimensional Scaling of Asymmetric Data |
asymmetry.measures | Asymmetry Measures for Probability Density Functions |
asympTest | A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples |
AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |
asypow | Calculate Power Utilizing Asymptotic Likelihood Ratio Methods |
ata | Automated Test Assembly |
atable | Create Tables for Reporting Clinical Trials |
ATE | Inference for Average Treatment Effects using Covariate Balancing |
atlas | Stanford 'ATLAS' Search Engine API |
atmcmc | Automatically Tuned Markov Chain Monte Carlo |
ATmet | Advanced Tools for Metrology |
atmopt | Analysis-of-Marginal-Tail-Means |
AtmRay | Acoustic Traveltime Calculations for 1-D Atmospheric Models |
ATR | Alternative Tree Representation |
aTSA | Alternative Time Series Analysis |
atsd | Support Querying Axibase Time-Series Database |
attachment | Deal with Dependencies |
attempt | Tools for Defensive Programming |
attenuation | Correcting for Attenuation Due to Measurement Error |
atus | American Time Use Survey Data |
AUC | Threshold independent performance measures for probabilistic classifiers |
aucm | AUC Maximization |
AUCRF | Variable Selection with Random Forest and the Area Under the Curve |
auctestr | Statistical Testing for AUC Data |
auctionr | Estimate First-Price Auction Model |
audio | Audio Interface for R |
audiolyzR | audiolyzR: Give your data a listen |
audiometry | Standard Conform Pure Tone Audiometry (PTA) Plots |
audit | Bounds for Accounting Populations |
auditor | Model Audit - Verification, Validation, and Error Analysis |
augmentedRCBD | Analysis of Augmented Randomised Complete Block Designs |
augSIMEX | Analysis of Data with Mixed Measurement Error and Misclassification in Covariates |
auk | eBird Data Extraction and Processing in R |
aurelius | Generates PFA Documents from R Code and Optionally Runs Them |
AurieLSHGaussian | Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections |
auRoc | Various Methods to Estimate the AUC |
AUtests | Approximate Unconditional and Permutation Tests |
auth0 | Secure Authentication in Shiny with Auth0 |
auto.pca | Automatic Variable Reduction Using Principal Component Analysis |
autoBagging | Learning to Rank Bagging Workflows with Metalearning |
autocogs | Automatic Cognostic Summaries |
AutoDeskR | An Interface to the 'AutoDesk' 'API' Platform |
autoencoder | Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data |
autoFRK | Automatic Fixed Rank Kriging |
autoimage | Multiple Heat Maps for Projected Coordinates |
autokeras | R Interface to 'AutoKeras' |
automagic | Automagically Document and Install Packages Necessary to Run R Code |
automap | Automatic interpolation package |
automl | Deep Learning with Metaheuristic |
automultinomial | Models for Spatially Correlated Data |
AutoPipe | Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis |
autoplotly | Automatic Generation of Interactive Visualizations for Statistical Results |
Autoplotprotein | Development of Visualization Tools for Protein Sequence |
AutoregressionMDE | Minimum Distance Estimation in Autoregressive Model |
AutoSEARCH | General-to-Specific (GETS) Modelling |
Autoseed | Retrieve Disease-Related Genes from Public Sources |
autoshiny | Automatic Transformation of an 'R' Function into a 'shiny' App |
AutoStepwiseGLM | Builds Stepwise GLMs via Train and Test Approach |
autota | Auto TA |
autothresholdr | An R Port of the 'ImageJ' Plugin 'Auto Threshold' |
autoTS | Automatic Model Selection and Prediction for Univariate Time Series |
av | Working with Audio and Video in R |
available | Check if the Title of a Package is Available, Appropriate and Interesting |
avar | Allan Variance |
averisk | Calculation of Average Population Attributable Fractions and Confidence Intervals |
aVirtualTwins | Adaptation of Virtual Twins Method from Jared Foster |
AWAPer | Catchment Area Weighted Daily Climate Data Anywhere in Australia |
aweek | Convert Dates to Arbitrary Week Definitions |
AWR | 'AWS' Java 'SDK' for R |
AWR.Athena | 'AWS' Athena 'DBI' Wrapper |
AWR.Kinesis | Amazon 'Kinesis' Consumer Application for Stream Processing |
AWR.KMS | A Simple Client to the 'AWS' Key Management Service |
aws | Adaptive Weights Smoothing |
aws.alexa | Client for the Amazon Alexa Web Information Services API |
aws.comprehend | Client for 'AWS Comprehend' |
aws.ec2metadata | Get EC2 Instance Metadata |
aws.iam | AWS IAM Client Package |
aws.kms | 'AWS Key Management Service' Client Package |
aws.lambda | AWS Lambda Client Package |
aws.polly | Client for AWS Polly |
aws.s3 | 'AWS S3' Client Package |
aws.signature | Amazon Web Services Request Signatures |
aws.transcribe | Client for 'AWS Transcribe' |
aws.translate | Client for 'AWS Translate' |
awsjavasdk | Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK |
awsMethods | Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi' |
aziztest | Novel Statistical Test for Aberration Enrichment |
AzureAuth | Authentication Services for Azure Active Directory |
AzureCognitive | Interface to Azure Cognitive Services |
AzureContainers | Interface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure' |
AzureGraph | Simple Interface to 'Microsoft Graph' |
AzureKeyVault | Key and Secret Management in 'Azure' |
AzureKusto | Interface to 'Kusto'/'Azure Data Explorer' |
azuremlsdk | Interface to the 'Azure Machine Learning' 'SDK' |
AzureQstor | Interface to 'Azure Queue Storage' |
AzureRMR | Interface to 'Azure Resource Manager' |
AzureStor | Storage Management in 'Azure' |
AzureVision | Interface to Azure Computer Vision Services |
AzureVM | Virtual Machines in 'Azure' |
AzureVMmetadata | Interface to Azure Virtual Machine Instance Metadata |
b6e6rl | Adaptive differential evolution, b6e6rl variant |
babar | Bayesian Bacterial Growth Curve Analysis in R |
babel | Ribosome Profiling Data Analysis |
babelwhale | Talking to 'Docker' and 'Singularity' Containers |
BaBooN | Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data |
babynames | US Baby Names 1880-2017 |
BACA | Bubble Chart to Compare Biological Annotations by using DAVID |
BacArena | Modeling Framework for Cellular Communities in their Environments |
BACCO | Bayesian Analysis of Computer Code Output (BACCO) |
BACCT | Bayesian Augmented Control for Clinical Trials |
bacistool | Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials |
backbone | Extracts the Backbone from Weighted Graphs |
backpipe | Backward Pipe (Right-to-Left) Operator |
backports | Reimplementations of Functions Introduced Since R-3.0.0 |
backShift | Learning Causal Cyclic Graphs from Unknown Shift Interventions |
backtest | Exploring Portfolio-Based Conjectures About Financial Instruments |
bacondecomp | Goodman-Bacon Decomposition |
BACprior | Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm |
bacr | Bayesian Adjustment for Confounding |
badgecreatr | Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme |
badger | Badge for R Package |
BAEssd | Bayesian Average Error approach to Sample Size Determination |
baggedcv | Bagged Cross-Validation for Kernel Density Bandwidth Selection |
baggr | Bayesian Aggregate Treatment Effects |
BAGofT | A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT) |
baguette | Efficient Model Functions for Bagging |
bahc | Filter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz |
bain | Bayes Factors for Informative Hypotheses |
baitmet | Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data |
balance | Visualize Balances of Compositional Data |
BalanceCheck | Balance Check for Multiple Covariates in Matched Observational Studies |
BalancedSampling | Balanced and Spatially Balanced Sampling |
BALCONY | Better ALignment CONsensus analYsis |
BALD | Robust Loss Development Using MCMC |
Ball | Statistical Inference and Sure Independence Screening via Ball Statistics |
BALLI | Expression RNA-Seq Data Analysis Based on Linear Mixed Model |
BallMapper | The Ball Mapper Algorithm |
BaM | Functions and Datasets for Books by Jeff Gill |
bama | High Dimensional Bayesian Mediation Analysis |
BAMBI | Bivariate Angular Mixture Models |
bamboo | Protein Secondary Structure Prediction Using the Bamboo Method |
bamdit | Bayesian Meta-Analysis of Diagnostic Test Data |
bamlss | Bayesian Additive Models for Location, Scale, and Shape (and Beyond) |
BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |
BaMORC | Bayesian Model Optimized Reference Correction Method for Assigned and Unassigned Protein NMR Spectra |
bamp | Bayesian Age-Period-Cohort Modeling and Prediction |
bandit | Functions for simple A/B split test and multi-armed bandit analysis |
bang | Bayesian Analysis, No Gibbs |
bannerCommenter | Make Banner Comments with a Consistent Format |
BANOVA | Hierarchical Bayesian ANOVA Models |
banR | R Client for the BAN API |
banter | BioAcoustic EveNT ClassifiER |
banxicoR | Download Data from the Bank of Mexico |
bapred | Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data) |
BaPreStoPro | Bayesian Prediction of Stochastic Processes |
BarBorGradient | Function Minimum Approximator |
barcode | Barcode distribution plots |
baRcodeR | Label Creation for Tracking and Collecting Data from Biological Samples |
BarcodingR | Species Identification using DNA Barcodes |
BAREB | A Bayesian Repulsive Biclustering Model for Periodontal Data |
BARIS | Access and Import Data from the French Open Data Portal |
Barnard | Barnard's Unconditional Test |
barplot3d | Create 3D Barplots |
barsurf | Heatmap-Related Plots and Smooth Multiband Color Interpolation |
BART | Bayesian Additive Regression Trees |
bartBMA | Bayesian Additive Regression Trees using Bayesian Model Averaging |
bartCause | Causal Inference using Bayesian Additive Regression Trees |
bartMachine | Bayesian Additive Regression Trees |
bartMachineJARs | bartMachine JARs |
baRulho | Quantifying Habitat-Induced Acoustic Signal Degradation |
Barycenter | Regularized Wasserstein Distances and Barycenters |
BAS | Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling |
basad | Bayesian Variable Selection with Shrinking and Diffusing Priors |
base.rms | Convert Regression Between Base Function and 'rms' Package |
base2grob | Convert Base Plot to 'grob' Object |
base64 | Base64 Encoder and Decoder |
base64enc | Tools for base64 encoding |
base64url | Fast and URL-Safe Base64 Encoder and Decoder |
baseballDBR | Sabermetrics and Advanced Baseball Statistics |
baseflow | Computes Hydrograph Separation |
basefun | Infrastructure for Computing with Basis Functions |
baseline | Baseline Correction of Spectra |
basetheme | Themes for Base Graphics Plots |
basf | Plot Simple Features with 'base' Sensibilities |
basicMCMCplots | Trace Plots, Density Plots and Chain Comparisons for MCMC Samples |
basicspace | Recovering a Basic Space from Issue Scales |
basictabler | Construct Rich Tables for Output to 'HTML'/'Excel' |
basicTrendline | Add Trendline and Confidence Interval of Basic Regression Models to Plot |
BASiNET | Classification of RNA Sequences using Complex Network Theory |
BASIX | BASIX: An efficient C/C++ toolset for R |
basket | Basket Trial Analysis |
BasketballAnalyzeR | Analysis and Visualization of Basketball Data |
BASS | Bayesian Adaptive Spline Surfaces |
BaSTA | Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data |
bastah | Big Data Statistical Analysis for High-Dimensional Models |
BAT | Biodiversity Assessment Tools |
batade | HTML reports and so on |
batata | Managing Packages Removal |
batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |
BatchExperiments | Statistical Experiments on Batch Computing Clusters |
BatchGetSymbols | Downloads and Organizes Financial Data for Multiple Tickers |
BatchJobs | Batch Computing with R |
batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |
batchscr | Batch Script Helpers |
batchtools | Tools for Computation on Batch Systems |
BaTFLED3D | Bayesian Tensor Factorization Linked to External Data |
batman | Convert Categorical Representations of Logicals to Actual Logicals |
batteryreduction | An R Package for Data Reduction by Battery Reduction |
BAwiR | Analysis of Basketball Data |
baycn | Bayesian Inference for Causal Networks |
bayefdr | Bayesian Estimation and Optimisation of Expected False Discovery Rate |
bayes4psy | User Friendly Bayesian Data Analysis for Psychology |
bayesAB | Fast Bayesian Methods for AB Testing |
bayesammi | Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model |
bayesanova | Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models |
BayesARIMAX | Bayesian Estimation of ARIMAX Model |
BayesBEKK | Bayesian Estimation of Bivariate Volatility Model |
BayesBinMix | Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions |
bayesbio | Miscellaneous Functions for Bioinformatics and Bayesian Statistics |
bayesboot | An Implementation of Rubin's (1981) Bayesian Bootstrap |
BayesBP | Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix |
bayesbr | Beta Regression on a Bayesian Model |
BayesCombo | Bayesian Evidence Combination |
BayesComm | Bayesian Community Ecology Analysis |
bayescopulareg | Bayesian Copula Regression |
bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |
BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |
bayesCT | Simulation and Analysis of Adaptive Bayesian Clinical Trials |
BayesCTDesign | Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data |
BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |
bayesdfa | Bayesian Dynamic Factor Analysis (DFA) with 'Stan' |
bayesdistreg | Bayesian Distribution Regression |
bayesDP | Tools for the Bayesian Discount Prior Function |
BayesESS | Determining Effective Sample Size |
BayesFactor | Computation of Bayes Factors for Common Designs |
BayesFM | Bayesian Inference for Factor Modeling |
bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |
BayesGESM | Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models |
BayesGOF | Bayesian Modeling via Frequentist Goodness-of-Fit |
BayesGPfit | Fast Bayesian Gaussian Process Regression Fitting |
BayesGWQS | Bayesian Grouped Weighted Quantile Sum Regression |
BayesianAnimalTracker | Bayesian Melding of GPS and DR Path for Animal Tracking |
bayesianETAS | Bayesian Estimation of the ETAS Model for Earthquake Occurrences |
BayesianFROC | FROC Analysis by Bayesian Approaches |
Bayesiangammareg | Bayesian Gamma Regression: Joint Mean and Shape Modeling |
BayesianGLasso | Bayesian Graphical Lasso |
BayesianNetwork | Bayesian Network Modeling and Analysis |
BayesianPower | Sample Size and Power for Comparing Inequality Constrained Hypotheses |
BayesianReasoning | Plot Positive and Negative Predictive Values for Medical Tests |
BayesianTools | General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics |
bayesImageS | Bayesian Methods for Image Segmentation using a Potts Model |
BayesLCA | Bayesian Latent Class Analysis |
bayesLife | Bayesian Projection of Life Expectancy |
bayeslincom | Linear Combinations of Bayesian Posterior Samples |
bayeslm | Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors |
BayesLN | Bayesian Inference for Log-Normal Data |
BayesLogit | PolyaGamma Sampling |
bayesloglin | Bayesian Analysis of Contingency Table Data |
bayeslongitudinal | Adjust Longitudinal Regression Models Using Bayesian Methodology |
bayesm | Bayesian Inference for Marketing/Micro-Econometrics |
BayesMallows | Bayesian Preference Learning with the Mallows Rank Model |
BayesMAMS | Designing Bayesian Multi-Arm Multi-Stage Studies |
BayesMassBal | Bayesian Data Reconciliation of Separation Processes |
bayesmeta | Bayesian Random-Effects Meta-Analysis |
BayesMFSurv | Bayesian Misclassified-Failure Survival Model |
bayesmix | Bayesian Mixture Models with JAGS |
BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |
BayesNetBP | Bayesian Network Belief Propagation |
BayesNI | BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints |
BayesNSGP | Bayesian Analysis of Non-Stationary Gaussian Process Models |
BayesPieceHazSelect | Variable Selection in a Hierarchical Bayesian Model for a Hazard Function |
BayesPiecewiseICAR | Hierarchical Bayesian Model for a Hazard Function |
bayesplot | Plotting for Bayesian Models |
bayesPop | Probabilistic Population Projection |
BayesPostEst | Generate Postestimation Quantities for Bayesian MCMC Estimation |
bayespref | Hierarchical Bayesian analysis of ecological count data |
bayesQR | Bayesian Quantile Regression |
bayesreg | Bayesian Regression Models with Global-Local Shrinkage Priors |
Bayesrel | Bayesian Reliability Estimation |
BayesReversePLLH | Fits the Bayesian Piecewise Linear Log-Hazard Model |
BayesRS | Bayes Factors for Hierarchical Linear Models with Continuous Predictors |
bayess | Bayesian Essentials with R |
BayesS5 | Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5) |
BayesSAE | Bayesian Analysis of Small Area Estimation |
BayesSampling | Bayes Linear Estimators for Finite Population |
BayesSenMC | Different Models of Posterior Distributions of Adjusted Odds Ratio |
BayesSpec | Bayesian Spectral Analysis Techniques |
BayesSummaryStatLM | MCMC Sampling of Bayesian Linear Models via Summary Statistics |
BayesSUR | Bayesian Seemingly Unrelated Regression |
bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |
BayesSurvival | Bayesian Survival Analysis for Right Censored Data |
bayest | Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models |
bayestestR | Understand and Describe Bayesian Models and Posterior Distributions |
bayesTFR | Bayesian Fertility Projection |
BayesTree | Bayesian Additive Regression Trees |
BayesTreePrior | Bayesian Tree Prior Simulation |
BayesTwin | Bayesian Analysis of Item-Level Twin Data |
BayesValidate | BayesValidate Package |
BayesVarSel | Bayes Factors, Model Choice and Variable Selection in Linear Models |
bayesvl | Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' |
BayesX | R Utilities Accompanying the Software Package BayesX |
BayesXsrc | R Package Distribution of the BayesX C++ Sources |
bayfoxr | Global Bayesian Foraminifera Core Top Calibration |
BayHaz | R Functions for Bayesian Hazard Rate Estimation |
BayLum | Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating |
baymedr | Computation of Bayes Factors for Common Biomedical Designs |
BaySIC | Bayesian Analysis of Significantly Mutated Genes in Cancer |
baystability | Bayesian Stability Analysis of Genotype by Environment Interaction (GEI) |
BAYSTAR | On Bayesian analysis of Threshold autoregressive model (BAYSTAR) |
baytrends | Long Term Water Quality Trend Analysis |
bazar | Miscellaneous Basic Functions |
BB | Solving and Optimizing Large-Scale Nonlinear Systems |
BBcor | Bayesian Bootstrapping Correlations |
bbefkr | Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density |
bbemkr | Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error |
BBI | Benthic Biotic Indices Calculation from Composition Data |
bbl | Boltzmann Bayes Learner |
BBmisc | Miscellaneous Helper Functions for B. Bischl |
bbmle | Tools for General Maximum Likelihood Estimation |
BBMM | Brownian bridge movement model |
BBMV | Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape |
bbo | Biogeography-Based Optimization |
bbotk | Black-Box Optimization Toolkit |
BBRecapture | Bayesian Behavioural Capture-Recapture Models |
bbreg | Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data |
bbricks | Bayesian Methods and Graphical Model Structures for Statistical Modeling |
bbsBayes | Hierarchical Bayesian Analysis of North American BBS Data |
bbw | Blocked Weighted Bootstrap |
bc3net | Gene Regulatory Network Inference with Bc3net |
BCA | Business and Customer Analytics |
BCA1SG | Block Coordinate Ascent with One-Step Generalized Rosen Algorithm |
bcaboot | Bias Corrected Bootstrap Confidence Intervals |
BCBCSF | Bias-Corrected Bayesian Classification with Selected Features |
bcc | Beta Control Charts |
BCC1997 | Calculation of Option Prices Based on a Universal Solution |
bcdata | Search and Retrieve Data from the BC Data Catalogue |
BCDating | Business Cycle Dating and Plotting Tools |
BcDiag | Diagnostics Plots for Bicluster Data |
BCE | Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data |
BCEA | Bayesian Cost Effectiveness Analysis |
BCEE | The Bayesian Causal Effect Estimation Algorithm |
BCellMA | B Cell Receptor Somatic Hyper Mutation Analysis |
bcf | Causal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests |
bcfrailph | Semiparametric Bivariate Correlated Frailty Model |
bcgam | Bayesian Constrained Generalised Linear Models |
BCgee | Bias-Corrected Estimates for Generalized Linear Models for Dependent Data |
BCHM | Clinical Trial Calculation Based on BCHM Design |
Bchron | Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling |
Bclim | Bayesian Palaeoclimate Reconstruction from Pollen Data |
BClustLonG | A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data |
bcmaps | Map Layers and Spatial Utilities for British Columbia |
bcmixed | Mixed Effect Model with the Box-Cox Transformation |
bcp | Bayesian Analysis of Change Point Problems |
bcpa | Behavioral change point analysis of animal movement |
bcpmeta | Bayesian Multiple Changepoint Detection Using Metadata |
BCRA | Breast Cancer Risk Assessment |
bcrm | Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials |
bcROCsurface | Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests |
bcrypt | 'Blowfish' Password Hashing Algorithm |
BCSub | A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) |
bcTSNE | Projected t-SNE for Batch Correction |
bcv | Cross-Validation for the SVD (Bi-Cross-Validation) |
bda | Binned Data Analysis |
bdchecks | Biodiversity Data Checks |
bdclean | A User-Friendly Biodiversity Data Cleaning App for the Inexperienced R User |
bdDwC | Darwinizer: Darwin Core (DwC) Field Names Standardization |
bde | Bounded Density Estimation |
BDEsize | Efficient Determination of Sample Size in Balanced Design of Experiments |
BDgraph | Bayesian Structure Learning in Graphical Models using Birth-Death MCMC |
bdots | Bootstrapped Differences of Time Series |
BDP2 | Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint |
bdpar | Big Data Preprocessing Architecture |
bdpopt | Optimisation of Bayesian Decision Problems |
bdpv | Inference and Design for Predictive Values in Diagnostic Tests |
bdribs | Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data |
bdscale | Remove Weekends and Holidays from ggplot2 Axes |
bdsmatrix | Routines for Block Diagonal Symmetric Matrices |
bdvis | Biodiversity Data Visualizations |
BDWreg | Bayesian Inference for Discrete Weibull Regression |
bdynsys | Bayesian Dynamical System Model |
BE | Bioequivalence Study Data Analysis |
bea.R | Bureau of Economic Analysis API |
BEACH | Biometric Exploratory Analysis Creation House |
beadarrayFilter | Bead filtering for Illumina bead arrays |
beadplexr | Analysis of Multiplex Cytometric Bead Assays |
beakr | A Minimalist Web Framework for R |
beam | Fast Bayesian Inference in Large Gaussian Graphical Models |
beanplot | Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot) |
beanz | Bayesian Analysis of Heterogeneous Treatment Effect |
beast | Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series |
beats | Heartbeat Detection in Electrocardiogram Data |
beautier | 'BEAUti' from R |
BEDASSLE | Quantifies effects of geo/eco distance on genetic differentiation |
BEDMatrix | Extract Genotypes from a PLINK .bed File |
bedr | Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' |
beepr | Easily Play Notification Sounds on any Platform |
beeswarm | The Bee Swarm Plot, an Alternative to Stripchart |
beezdemand | Behavioral Economic Easy Demand |
beginr | Functions for R Beginners |
behaviorchange | Tools for Behavior Change Researchers and Professionals |
behavr | Canonical Data Structure for Behavioural Data |
belex | Download Historical Data from the Belgrade Stock Exchange |
belg | Boltzmann Entropy of a Landscape Gradient |
bellreg | Count Regression Models Based on the Bell Distribution |
bench | High Precision Timing of R Expressions |
benchden | 28 benchmark densities from Berlinet/Devroye (1994) |
Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |
benchmarkme | Crowd Sourced System Benchmarks |
benchmarkmeData | Data Set for the 'benchmarkme' Package |
benchr | High Precise Measurement of R Expressions Execution Time |
bender | Bender Client |
benford.analysis | Benford Analysis for Data Validation and Forensic Analytics |
BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |
BENMMI | Benthic Multi-Metric Index |
bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |
benthos | Marine Benthic Ecosystem Analysis |
Bergm | Bayesian Exponential Random Graph Models |
berryFunctions | Function Collection Related to Plotting and Hydrology |
BeSS | Best Subset Selection in Linear, Logistic and CoxPH Models |
Bessel | Computations and Approximations for Bessel Functions |
BEST | Bayesian Estimation Supersedes the t-Test |
bestglm | Best Subset GLM and Regression Utilities |
Bestie | Bayesian Estimation of Intervention Effects |
bestNormalize | Normalizing Transformation Functions |
BESTree | Branch-Exclusive Splits Trees |
bestSDP | Burden Estimate of Common Communicable Diseases in Settlements of Displaced Populations |
BetaBit | Mini Games from Adventures of Beta and Bit |
betaboost | Boosting Beta Regression |
betacal | Beta Calibration |
betadiv | Estimators of Multiple-Site Dissimilarity Indices for the Assessment of Beta Diversity |
betafam | Detecting rare variants for quantitative traits using nuclear families |
betafunctions | Functions for Working with Two- And Four-Parameter Beta Probability Distributions |
betalink | Beta-Diversity of Species Interactions |
betapart | Partitioning Beta Diversity into Turnover and Nestedness Components |
BetaPASS | Calculate Power and Sample Size with Beta Regression |
betaper | Taxonomic Uncertainty on Multivariate Analyses of Ecological Data |
betareg | Beta Regression |
betategarch | Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models |
bethel | Bethel's algorithm |
BETS | Brazilian Economic Time Series |
bets.covid19 | The BETS Model for Early Epidemic Data |
BeviMed | Bayesian Evaluation of Variant Involvement in Mendelian Disease |
BeyondBenford | Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset |
beyondWhittle | Bayesian Spectral Inference for Stationary Time Series |
bezier | Toolkit for Bezier Curves and Splines |
bfast | Breaks For Additive Season and Trend (BFAST) |
bfp | Bayesian Fractional Polynomials |
BFpack | Flexible Bayes Factor Testing of Scientific Expectations |
BFS | Search and Download Data from the Swiss Federal Statistical Office (BFS) |
bfsl | Best-Fit Straight Line |
bfsMaps | Plot Maps from Switzerland by Swiss Federal Statistical Office |
bfw | Bayesian Framework for Computational Modeling |
BGData | A Suite of Packages for Analysis of Big Genomic Data |
bgeva | Binary Generalized Extreme Value Additive Models |
BGGE | Bayesian Genomic Linear Models Applied to GE Genome Selection |
BGGM | Bayesian Gaussian Graphical Models |
bggum | Bayesian Estimation of Generalized Graded Unfolding Model Parameters |
BGLR | Bayesian Generalized Linear Regression |
bgmfiles | Example BGM Files for the Atlantis Ecosystem Model |
bgmm | Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling |
BGPhazard | Markov Beta and Gamma Processes for Modeling Hazard Rates |
BGSIMD | Block Gibbs Sampler with Incomplete Multinomial Distribution |
bgsmtr | Bayesian Group Sparse Multi-Task Regression |
BGVAR | Bayesian Global Vector Autoregressions |
BH | Boost C++ Header Files |
BHAI | Estimate the Burden of Healthcare-Associated Infections |
Bhat | General likelihood exploration |
BHH2 | Useful Functions for Box, Hunter and Hunter II |
bhm | Biomarker Threshold Models |
BHMSMAfMRI | Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data |
bhpm | Bayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering |
BHSBVAR | Structural Bayesian Vector Autoregression Models |
BHTSpack | Bayesian Multi-Plate High-Throughput Screening of Compounds |
biasbetareg | Bias correction of the parameter estimates of the beta regression model |
BiasedUrn | Biased Urn Model Distributions |
bib2df | Parse a BibTeX File to a Data Frame |
BiBitR | R Wrapper for Java Implementation of BiBit |
bibliometrix | Comprehensive Science Mapping Analysis |
BibPlots | Plot Functions for Use in Bibliometrics |
bibtex | Bibtex Parser |
biclique | Maximal Biclique Enumeration in Bipartite Graphs |
biclust | BiCluster Algorithms |
biclustermd | Biclustering with Missing Data |
BICORN | Integrative Inference of De Novo Cis-Regulatory Modules |
BiDAG | Bayesian Inference for Directed Acyclic Graphs |
BiDimRegression | Calculates the Bidimensional Regression Between Two 2D Configurations |
BIEN | Tools for Accessing the Botanical Information and Ecology Network Database |
bife | Binary Choice Models with Fixed Effects |
BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |
biganalytics | Utilities for 'big.matrix' Objects from Package 'bigmemory' |
bigassertr | Assertion and Message Functions |
bigchess | Read, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines |
bigdatadist | Distances for Machine Learning and Statistics in the Context of Big Data |
BIGDAWG | Case-Control Analysis of Multi-Allelic Loci |
bigdist | Store Distance Matrices on Disk |
bigGP | Distributed Gaussian Process Calculations |
BIGL | Biochemically Intuitive Generalized Loewe Model |
biglasso | Extending Lasso Model Fitting to Big Data |
bigleaf | Physical and Physiological Ecosystem Properties from Eddy Covariance Data |
biglm | bounded memory linear and generalized linear models |
biglmm | Bounded Memory Linear and Generalized Linear Models |
bigMap | Big Data Mapping |
bigmatch | Making Optimal Matching Size-Scalable Using Optimal Calipers |
bigmemory | Manage Massive Matrices with Shared Memory and Memory-Mapped Files |
bigmemory.sri | A shared resource interface for Bigmemory Project packages |
bigparallelr | Easy Parallel Tools |
bigQueryR | Interface with Google BigQuery with Shiny Compatibility |
BigQuic | Big Quadratic Inverse Covariance Estimation |
bigreadr | Read Large Text Files |
bigReg | Generalized Linear Models (GLM) for Large Data Sets |
bigrquery | An Interface to Google's 'BigQuery' 'API' |
bigsnpr | Analysis of Massive SNP Arrays |
bigsparser | Sparse Matrix Format with Data on Disk |
bigsplines | Smoothing Splines for Large Samples |
bigstatsr | Statistical Tools for Filebacked Big Matrices |
bigstep | Stepwise Selection for Large Data Sets |
bigtabulate | Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects |
bigtcr | Nonparametric Analysis of Bivariate Gap Time with Competing Risks |
bigtime | Sparse Estimation of Large Time Series Models |
BigTSP | Top Scoring Pair based methods for classification |
bigutilsr | Utility Functions for Large-scale Data |
BigVAR | Dimension Reduction Methods for Multivariate Time Series |
bikeshare14 | Bay Area Bike Share Trips in 2014 |
bikm1 | Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets |
bild | A Package for BInary Longitudinal Data |
billboard | Contains Data of Billboard Hot 100 Songs |
billboarder | Create Interactive Chart with the JavaScript 'Billboard' Library |
bimetallic | Power for SNP analyses using silver standard cases |
bimets | Time Series and Econometric Modeling |
bimixt | Estimates Mixture Models for Case-Control Data |
BimodalIndex | The Bimodality Index |
Binarize | Binarization of One-Dimensional Data |
BinarybalancedCut | Threshold Cut Point of Probability for a Binary Classifier Model |
BinaryDosage | Creates, Merges, and Reads Binary Dosage Files |
BinaryEMVS | Variable Selection for Binary Data Using the EM Algorithm |
BinaryEPPM | Mean and Variance Modeling of Binary Data |
binaryGP | Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response |
binaryLogic | Binary Logic |
binb | 'binb' is not 'Beamer' |
BINCOR | Estimate the Correlation Between Two Irregular Time Series |
binda | Multi-Class Discriminant Analysis using Binary Predictors |
bindata | Generation of Artificial Binary Data |
bindr | Parametrized Active Bindings |
bindrcpp | An 'Rcpp' Interface to Active Bindings |
binequality | Methods for Analyzing Binned Income Data |
binford | Binford's Hunter-Gatherer Data |
bingat | Binary Graph Analysis Tools |
binGroup | Evaluation and Experimental Design for Binomial Group Testing |
binGroup2 | Identification and Estimation using Group Testing |
BinGSD | Calculation for Single Arm Group Sequential Test with Binary Endpoint |
binhf | Haar-Fisz Functions for Binomial Data |
binman | A Binary Download Manager |
BinMat | Processes Binary Data Obtained from Fragment Analysis |
binMto | Many-to-One Comparisons of Proportions |
binnednp | Nonparametric Estimation for Interval-Grouped Data |
BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |
BinNor | Simultaneous Generation of Multivariate Binary and Normal Variates |
binom | Binomial Confidence Intervals For Several Parameterizations |
binomialcftp | Generates binomial random numbers via the coupling from the past algorithm |
binomialMix | Mixture Models for Binomial and Longitudinal Data |
binomialRF | Binomial Random Forest Feature Selection |
binomlogit | Efficient MCMC for Binomial Logit Models |
binomSamSize | Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling |
BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |
binostics | Compute Scagnostics |
binovisualfields | Depth-Dependent Binocular Visual Fields Simulation |
BinQuasi | Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood |
binr | Cut Numeric Values into Evenly Distributed Groups |
BinSegBstrap | Piecewise Smooth Regression by Bootstrapped Binary Segmentation |
binseqtest | Exact Binary Sequential Designs and Analysis |
binsmooth | Generate PDFs and CDFs from Binned Data |
binsreg | Binscatter Estimation and Inference |
binst | Data Preprocessing, Binning for Classification and Regression |
bio.infer | Predict environmental conditions from biological observations |
bio3d | Biological Structure Analysis |
bioacoustics | Analyse Audio Recordings and Automatically Extract Animal Vocalizations |
bioassays | Summarising Multi Well Plate Cellular Assay |
bioC.logs | BioConductor Package Downloads Stats |
BioCircos | Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js' |
BiocManager | Access the Bioconductor Project Package Repository |
Biocomb | Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis |
biocompute | Create and Manipulate BioCompute Objects |
Biodem | Biodemography Functions |
BiodiversityR | Package for Community Ecology and Suitability Analysis |
BIOdry | Multilevel Modeling of Dendroclimatical Fluctuations |
BioFTF | Biodiversity Assessment Using Functional Tools |
biogas | Process Biogas Data and Predict Biogas Production |
biogeo | Point Data Quality Assessment and Coordinate Conversion |
biogram | N-Gram Analysis of Biological Sequences |
Bioi | Biological Image Analysis |
bioimagetools | Tools for Microscopy Imaging |
bioinactivation | Mathematical Modelling of (Dynamic) Microbial Inactivation |
BioInstaller | Integrator of Bioinformatics Resources |
biolink | Create Hyperlinks to Biological Databases and Resources |
Biolinv | Modelling and Forecasting Biological Invasions |
BIOM.utils | Utilities for the BIOM (Biological Observation Matrix) Format |
BioMark | Find Biomarkers in Two-Class Discrimination Problems |
biomartr | Genomic Data Retrieval |
BIOMASS | Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests |
BioMedR | Generating Various Molecular Representations for Chemicals, Proteins, DNAs, RNAs and Their Interactions |
biomod2 | Ensemble Platform for Species Distribution Modeling |
bionetdata | Biological and chemical data networks |
bioOED | Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation |
Biopeak | Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data |
BioPET | Biomarker Prognostic Enrichment Tool |
BioPETsurv | Biomarker Prognostic Enrichment Tool for Time-to-Event Trial |
bioPN | Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets |
BioProbability | Probability in Biostatistics |
bioRad | Biological Analysis and Visualization of Weather Radar Data |
biorxivr | Search and Download Papers from the bioRxiv Preprint Server |
Bios2cor | From Biological Sequences and Simulations to Correlation Analysis |
bios2mds | From Biological Sequences to Multidimensional Scaling |
bioseq | A Toolbox for Manipulating Biological Sequences |
bioset | Convert a Matrix of Raw Values into Nice and Tidy Data |
biosignalEMG | Tools for Electromyogram Signals (EMG) Analysis |
biospear | Biomarker Selection in Penalized Regression Models |
biostat3 | Utility Functions, Datasets and Extended Examples for Survival Analysis |
BioStatR | Initiation à La Statistique Avec R |
biotic | Calculation of Freshwater Biotic Indices |
biotools | Tools for Biometry and Applied Statistics in Agricultural Science |
bipartite | Visualising Bipartite Networks and Calculating Some (Ecological) Indices |
bipartiteD3 | Interactive Bipartite Graphs |
biplotbootGUI | Bootstrap on Classical Biplots and Clustering Disjoint Biplot |
BiplotGUI | Interactive Biplots in R |
BiProbitPartial | Bivariate Probit with Partial Observability |
birankr | Ranking Nodes in Bipartite and Weighted Networks |
birdring | Methods to Analyse Ring Re-Encounter Data |
BIRDS | Biodiversity Information Review and Decision Support |
birk | MA Birk's Functions |
birtr | The R Package for "The Basics of Item Response Theory Using R" |
BIS | Programmatic Access to Bank for International Settlements Data |
biscale | Tools and Palettes for Bivariate Thematic Mapping |
bisect | Estimating Cell Type Composition from Methylation Sequencing Data |
bisectr | Tools to find bad commits with git bisect |
BiSEp | Toolkit to Identify Candidate Synthetic Lethality |
bisque | Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models |
BisqueRNA | Decomposition of Bulk Expression with Single-Cell Sequencing |
BisRNA | Analysis of RNA Cytosine-5 Methylation |
bit | Classes and Methods for Fast Memory-Efficient Boolean Selections |
bit64 | A S3 Class for Vectors of 64bit Integers |
bite | Bayesian Integrative Models of Trait Evolution |
bitmexr | R Client for BitMEX |
bitops | Bitwise Operations |
BiTrinA | Binarization and Trinarization of One-Dimensional Data |
bitsqueezr | Quantize Floating-Point Numbers for Improved Compressibility |
biva | Business Intelligence |
bivariate | Bivariate Probability Distributions |
Bivariate.Pareto | Bivariate Pareto Models |
BivarP | Estimating the Parameters of Some Bivariate Distributions |
bivarRIpower | Sample size calculations for bivariate longitudinal data |
BivGeo | Basu-Dhar Bivariate Geometric Distribution |
bivgeom | Roy's Bivariate Geometric Distribution |
bivquant | Estimation of Bivariate Quantiles |
BivRec | Bivariate Alternating Recurrent Event Data Analysis |
BivRegBLS | Tolerance Interval and EIV Regression - Method Comparison Studies |
bivrp | Bivariate Residual Plots with Simulation Polygons |
BivUnifBin | Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data |
biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |
biwt | Functions to compute the biweight mean vector and covariance & correlation matrices |
bizdays | Business Days Calculations and Utilities |
bjscrapeR | An API Wrapper for the Bureau of Justice Statistics (BJS) |
bkmr | Bayesian Kernel Machine Regression |
BKPC | Bayesian Kernel Projection Classifier |
blackbox | Black Box Optimization and Exploration of Parameter Space |
blaise | Read and Write FWF Files in the Blaise Format |
BlakerCI | Blaker's Binomial and Poisson Confidence Limits |
BlandAltmanLeh | Plots (Slightly Extended) Bland-Altman Plots |
blandr | Bland-Altman Method Comparison |
blapsr | Bayesian Inference with Laplace Approximations and P-Splines |
blastula | Easily Send HTML Email Messages |
blatr | Send Emails Using 'Blat' for Windows |
Blaunet | Calculate and Analyze Blau Status for (Covert) Organizations |
blavaan | Bayesian Latent Variable Analysis |
BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |
blendedLink | A New Link Function that Blends Two Specified Link Functions |
blender | Analyze biotic homogenization of landscapes |
Blendstat | Joint Analysis of Experiments with Mixtures and Random Effects |
blin | Bipartite Longitudinal Influence Network (BLIN) Estimation |
blindrecalc | Blinded Sample Size Recalculation |
bliss | Bayesian Functional Linear Regression with Sparse Step Functions |
blkbox | Data Exploration with Multiple Machine Learning Algorithms |
blm | Binomial linear and linear-expit regression |
blme | Bayesian Linear Mixed-Effects Models |
blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |
BLModel | Black-Litterman Posterior Distribution |
blob | A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS') |
blockcluster | Co-Clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets |
BlockCov | Estimation of Large Block Covariance Matrices |
blockCV | Spatial and Environmental Blocking for K-Fold Cross-Validation |
BlockFeST | Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation |
blockForest | Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data |
blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |
BlockMessage | Creates strings that show a text message in 8 by 8 block letters |
blockmodeling | Generalized and Classical Blockmodeling of Valued Networks |
blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |
blockrand | Randomization for Block Random Clinical Trials |
blockRAR | Block Design for Response-Adaptive Randomization |
blocksdesign | Nested and Crossed Block Designs for Factorial and Unstructured Treatment Sets |
blockTools | Block, Assign, and Diagnose Potential Interference in Randomized Experiments |
blogdown | Create Blogs and Websites with R Markdown |
BLOQ | Impute and Analyze Data with BLOQ Observations |
blorr | Tools for Developing Binary Logistic Regression Models |
BLPestimatoR | Performs a BLP Demand Estimation |
BLR | Bayesian Linear Regression |
blrm | Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling |
BLRPM | Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model |
BLRShiny | Interactive Document for Working with Binary Logistic Regression Analysis |
blsAPI | Request Data from the U.S. Bureau of Labor Statistics API |
blscrapeR | An API Wrapper for the Bureau of Labor Statistics (BLS) |
BLSM | Bayesian Latent Space Model |
bltm | Bayesian Latent Threshold Modeling |
BlythStillCasellaCI | Blyth-Still-Casella Exact Binomial Confidence Intervals |
BMA | Bayesian Model Averaging |
BMAmevt | Multivariate Extremes: Bayesian Estimation of the Spectral Measure |
bmass | Bayesian Multivariate Analysis of Summary Statistics |
bmd | Benchmark dose analysis for dose-response data |
bmem | Mediation Analysis with Missing Data Using Bootstrap |
bmeta | Bayesian Meta-Analysis and Meta-Regression |
BMisc | Miscellaneous Functions for Panel Data, Quantiles, and Printing Results |
Bmix | Bayesian Sampling for Stick-Breaking Mixtures |
bmixture | Bayesian Estimation for Finite Mixture of Distributions |
bmk | MCMC diagnostics package |
bmlm | Bayesian Multilevel Mediation |
bmmix | Bayesian multinomial mixture |
bmp | Read Windows Bitmap (BMP) Images |
BMRBr | 'BMRB' File Downloader |
bmrm | Bundle Methods for Regularized Risk Minimization Package |
BMRSr | Wrapper Functions to the 'BMRS API' |
BMRV | Bayesian Models for Rare Variant Association Analysis |
BMS | Bayesian Model Averaging Library |
BMT | The BMT Distribution |
BMTAR | Bayesian Approach for MTAR Models with Missing Data |
BMTME | Bayesian Multi-Trait Multi-Environment for Genomic Selection Analysis |
bnclassify | Learning Discrete Bayesian Network Classifiers from Data |
BNDataGenerator | Data Generator based on Bayesian Network Model |
bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |
bnma | Bayesian Network Meta-Analysis using 'JAGS' |
BNN | Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection |
bnnSurvival | Bagged k-Nearest Neighbors Survival Prediction |
bnormnlr | Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models |
bnpa | Bayesian Networks & Path Analysis |
BNPdensity | Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures |
BNPmix | Bayesian Nonparametric Mixture Models |
BNPMIXcluster | Bayesian Nonparametric Model for Clustering with Mixed Scale Variables |
bnpmr | Bayesian Monotonic Nonparametric Regression |
bnpsd | Simulate Genotypes from the BN-PSD Admixture Model |
BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |
BNrich | Pathway Enrichment Analysis Based on Bayesian Network |
BNSL | Bayesian Network Structure Learning |
BNSP | Bayesian Non- And Semi-Parametric Model Fitting |
bnspatial | Spatial Implementation of Bayesian Networks and Mapping |
bnstruct | Bayesian Network Structure Learning from Data with Missing Values |
bnviewer | Interactive Visualization of Bayesian Networks |
boa | Bayesian Output Analysis Program (BOA) for MCMC |
BoardGames | Board Games and Tools for Building Board Games |
bodenmiller | Profilling of Peripheral Blood Mononuclear Cells using CyTOF |
BOG | Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions |
boilerpipeR | Interface to the Boilerpipe Java Library |
BOIN | Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials |
BOJ | Interface to Bank of Japan Statistics |
bold | Interface to Bold Systems API |
Bolstad | Functions for Elementary Bayesian Inference |
Bolstad2 | Bolstad functions |
BoltzMM | Boltzmann Machines with MM Algorithms |
bomrang | Australian Government Bureau of Meteorology ('BOM') Data Client |
BondValuation | Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions |
BonEV | An Improved Multiple Testing Procedure for Controlling False Discovery Rates |
bookdown | Authoring Books and Technical Documents with R Markdown |
bookdownplus | Generate Assorted Books and Documents with R 'bookdown' Package |
BoolFilter | Optimal Estimation of Partially Observed Boolean Dynamical Systems |
BoolNet | Construction, Simulation and Analysis of Boolean Networks |
Boom | Bayesian Object Oriented Modeling |
BoomSpikeSlab | MCMC for Spike and Slab Regression |
BoostMLR | Boosting for Multivariate Longitudinal Response |
boostmtree | Boosted Multivariate Trees for Longitudinal Data |
boostr | A modular framework to bag or boost any estimation procedure |
boot | Bootstrap Functions (Originally by Angelo Canty for S) |
boot.heterogeneity | A Bootstrap-Based Heterogeneity Test for Meta-Analysis |
bootcluster | Bootstrapping Estimates of Clustering Stability |
bootES | Bootstrap Effect Sizes |
bootImpute | Bootstrap Inference for Multiple Imputation |
bootLR | Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests |
BootMRMR | Bootstrap-MRMR Technique for Informative Gene Selection |
bootnet | Bootstrap Methods for Various Network Estimation Routines |
BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |
bootRes | Bootstrapped Response and Correlation Functions |
bootruin | A Bootstrap Test for the Probability of Ruin in the Classical Risk Process |
bootspecdens | Testing equality of spectral densities |
bootsPLS | Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification |
bootStepAIC | Bootstrap stepAIC |
bootstrap | Functions for the Book "An Introduction to the Bootstrap" |
bootstrapFP | Bootstrap Algorithms for Finite Population Inference |
BootstrapQTL | Bootstrap cis-QTL Method that Corrects for the Winner's Curse |
bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |
boottol | Bootstrap Tolerance Levels for Credit Scoring Validation Statistics |
bootUR | Bootstrap Unit Root Tests |
Boptbd | Bayesian Optimal Block Designs |
bor | Transforming Behavioral Observation Records into Data Matrices |
boral | Bayesian Ordination and Regression AnaLysis |
borrowr | Estimate Causal Effects with Borrowing Between Data Sources |
Boruta | Wrapper Algorithm for All Relevant Feature Selection |
BosonSampling | Classical Boson Sampling |
BoSSA | A Bunch of Structure and Sequence Analysis |
BOSSreg | Best Orthogonalized Subset Selection (BOSS) |
botor | 'AWS Python SDK' ('boto3') for R |
boundingbox | Create a Bounding Box in an Image |
boussinesq | Analytic Solutions for (ground-water) Boussinesq Equation |
BoutrosLab.plotting.general | Functions to Create Publication-Quality Plots |
boxcoxmix | Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects |
boxplotdbl | Double Box Plot for Two-Axes Correlation |
boxr | Interface for the 'Box.com API' |
bpa | Basic Pattern Analysis |
bpbounds | Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions |
bpca | Biplot of Multivariate Data Based on Principal Components Analysis |
bpcp | Beta Product Confidence Procedure for Right Censored Data |
bpDir | Boxplots for Directional Data |
bPeaks | bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes |
BPEC | Bayesian Phylogeographic and Ecological Clustering |
bpgmm | Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models |
BPM | Bayesian Purity Model to Estimate Tumor Purity |
bpnreg | Bayesian Projected Normal Regression Models for Circular Data |
bpp | Computations Around Bayesian Predictive Power |
bqror | Bayesian Quantile Regression for Ordinal Models |
bqtl | Bayesian QTL Mapping Toolkit |
bracer | Brace Expansions |
BradleyTerry2 | Bradley-Terry Models |
braidReports | Visualize Combined Action Response Surfaces and Report BRAID Analyses |
braidrm | Fitting Dose Response with the BRAID Combined Action Model |
brainGraph | Graph Theory Analysis of Brain MRI Data |
brainKCCA | Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis |
brainR | Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging |
Branching | Simulation and Estimation for Branching Processes |
brandwatchR | 'Brandwatch' API to R |
brant | Test for Parallel Regression Assumption |
braQCA | Bootstrapped Robustness Assessment for Qualitative Comparative Analysis |
BRDT | Binomial Reliability Demonstration Tests |
brea | Bayesian Recurrent Event Analysis |
breakage | SICM pipette tip geometry estimation |
breakDown | Model Agnostic Explainers for Individual Predictions |
breakfast | Multiple Change-Point Detection and Segmentation |
breakpoint | An R Package for Multiple Break-Point Detection via the Cross-Entropy Method |
BreakPoints | Identify Breakpoints in Series of Data |
breathtestcore | Core Functions to Read and Fit 13c Time Series from Breath Tests |
breathteststan | Stan-Based Fit to Gastric Emptying Curves |
bReeze | Functions for Wind Resource Assessment |
BRETIGEA | Brain Cell Type Specific Gene Expression Analysis |
brew | Templating Framework for Report Generation |
brglm | Bias Reduction in Binomial-Response Generalized Linear Models |
brglm2 | Bias Reduction in Generalized Linear Models |
brickr | Emulate LEGO Bricks in 2D and 3D |
bridgedist | An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) |
bridger2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data |
bridgesampling | Bridge Sampling for Marginal Likelihoods and Bayes Factors |
brinton | A Graphical EDA Tool |
brio | Basic R Input Output |
briqr | Interface to the 'Briq' API |
BRISC | Fast Inference for Large Spatial Datasets using BRISC |
briskaR | Biological Risk Assessment |
BRL | Beta Record Linkage |
brlrmr | Bias Reduction with Missing Binary Response |
brm | Binary Regression Model |
brms | Bayesian Regression Models using 'Stan' |
brnn | Bayesian Regularization for Feed-Forward Neural Networks |
Brobdingnag | Very Large Numbers in R |
broman | Karl Broman's R Code |
broom | Convert Statistical Objects into Tidy Tibbles |
broom.mixed | Tidying Methods for Mixed Models |
broomExtra | Enhancements for 'broom' and 'easystats' Package Families |
brotli | A Compression Format Optimized for the Web |
BrownDog | Brown Dog R Interface |
Brq | Bayesian Analysis of Quantile Regression Models |
brr | Bayesian Inference on the Ratio of Two Poisson Rates |
brranching | Fetch 'Phylogenies' from Many Sources |
brt | Biological Relevance Testing |
BRugs | Interface to the 'OpenBUGS' MCMC Software |
Brundle | Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data |
brunnermunzel | (Permuted) Brunner-Munzel Test |
bs4Dash | A 'Bootstrap 4' Version of 'shinydashboard' |
BSagri | Safety Assessment in Agricultural Field Trials |
bsam | Bayesian State-Space Models for Animal Movement |
bsamGP | Bayesian Spectral Analysis Models using Gaussian Process Priors |
BSDA | Basic Statistics and Data Analysis |
bsearchtools | Binary Search Tools |
BSGS | Bayesian Sparse Group Selection |
BSGW | Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression |
bshazard | Nonparametric Smoothing of the Hazard Function |
bSims | Bird Point Count Simulator |
BSL | Bayesian Synthetic Likelihood |
BsMD | Bayes Screening and Model Discrimination |
BSPADATA | Bayesian Proposal to Fit Spatial Econometric Models |
bspec | Bayesian Spectral Inference |
bsplinePsd | Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors |
bsplus | Adds Functionality to the R Markdown + Shiny Bootstrap Framework |
bspm | Bridge to System Package Manager |
bspmma | Bayesian Semiparametric Models for Meta-Analysis |
BSS | Brownian Semistationary Processes |
BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |
bssm | Bayesian Inference of Non-Gaussian State Space Models |
bssn | Birnbaum-Saunders Model |
bst | Gradient Boosting |
bsts | Bayesian Structural Time Series |
bsub | Submitter and Monitor of the 'LSF Cluster' |
BSW | Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm |
btb | Beyond the Border - Kernel Density Estimation for Urban Geography |
BTdecayLasso | Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso |
btergm | Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood |
BTLLasso | Modelling Heterogeneity in Paired Comparison Data |
BTM | Biterm Topic Models for Short Text |
BTSPAS | Bayesian Time-Stratified Population Analysis |
BTYD | Implementing Buy 'Til You Die Models |
BTYDplus | Probabilistic Models for Assessing and Predicting your Customer Base |
bubblyr | Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds |
bucky | Bucky's Archive for Data Analysis in the Social Sciences |
BUCSS | Bias and Uncertainty Corrected Sample Size |
Buddle | A Deep Learning for Statistical Classification and Regression Analysis with Random Effects |
buildmer | Stepwise Elimination and Term Reordering for Mixed-Effects Regression |
buildr | Comfort Way to Run Build Scripts |
bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |
bulletcp | Automatic Groove Identification via Bayesian Changepoint Detection |
bulletr | Algorithms for Matching Bullet Lands |
BullsEyeR | Topic Modelling |
bullwhipgame | Bullwhip Effect Demo in Shiny |
bunching | Estimate Bunching |
bunchr | Analyze Bunching in a Kink or Notch Setting |
bundesbank | Download Data from Bundesbank |
bundesligR | All Final Tables of the Bundesliga |
bupaR | Business Process Analysis in R |
burnr | Forest Fire History Analysis |
BurStFin | Burns Statistics Financial |
BurStMisc | Burns Statistics Miscellaneous |
bursts | Markov model for bursty behavior in streams |
busdater | Standard Date Calculations for Business |
BusinessDuration | Calculates Business Duration Between Two Dates |
butcher | Model Butcher |
BuyseTest | Generalized Pairwise Comparisons |
Bvalue | B-Value and Empirical Equivalence Bound |
BVAR | Hierarchical Bayesian Vector Autoregression |
bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |
bvartools | Bayesian Inference of Vector Autoregressive Models |
bvenn | A Simple alternative to proportional Venn diagrams |
bvls | The Stark-Parker algorithm for bounded-variable least squares |
bvpSolve | Solvers for Boundary Value Problems of Differential Equations |
BVS | Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies |
BVSNLP | Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors |
bwd | Backward Procedure for Change-Point Detection |
bWGR | Bayesian Whole-Genome Regression |
BWGS | BreedWheat Genomic Selection Pipeline |
bwimage | Describe Image Patterns in Natural Structures |
BWStest | Baumgartner Weiss Schindler Test of Equal Distributions |
bwsTools | Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs |
bysykkel | Get City Bike Data from Norway |
bytescircle | Statistics About Bytes Contained in a File as a Circle Plot |
bzinb | Bivariate Zero-Inflated Negative Binomial Model Estimator |
c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |
c14bazAAR | Download and Prepare C14 Dates from Different Source Databases |
c212 | Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) |
c2c | Compare Two Classifications or Clustering Solutions of Varying Structure |
c3 | 'C3.js' Chart Library |
c3net | Infering large-scale gene networks with C3NET |
C443 | See a Forest for the Trees |
C50 | C5.0 Decision Trees and Rule-Based Models |
ca | Simple, Multiple and Joint Correspondence Analysis |
CA3variants | Three-Way Correspondence Analysis Variants |
cabinets | Project Specific Workspace Organization Templates |
cabootcrs | Bootstrap Confidence Regions for Simple and Multiple Correspondence Analysis |
cacIRT | Classification Accuracy and Consistency under Item Response Theory |
CaDENCE | Conditional Density Estimation Network Construction and Evaluation |
CADFtest | A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests |
CADStat | Provides a GUI to Several Statistical Methods |
caesar | Encrypts and Decrypts Strings |
caffsim | Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model |
cAIC4 | Conditional Akaike Information Criterion for 'lme4' and 'nlme' |
CAinterprTools | Graphical Aid in Correspondence Analysis Interpretation and Significance Testings |
Cairo | R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output |
cairoDevice | Embeddable Cairo Graphics Device Driver |
CAISEr | Comparison of Algorithms with Iterative Sample Size Estimation |
calACS | Calculations for All Common Subsequences |
Calculator.LR.FNs | Calculator for LR Fuzzy Numbers |
calculus | High Dimensional Numerical and Symbolic Calculus |
calcUnique | Simple Wrapper for Computationally Expensive Functions |
calcWOI | Calculates the Wavelet-Based Organization Index |
calendar | Create, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data |
CALF | Coarse Approximation Linear Function |
calibrar | Automated Parameter Estimation for Complex (Ecological) Models |
calibrate | Calibration of Scatterplot and Biplot Axes |
calibrateBinary | Calibration for Computer Experiments with Binary Responses |
CalibrateSSB | Weighting and Estimation for Panel Data with Non-Response |
calibrator | Bayesian Calibration of Complex Computer Codes |
CalibratR | Mapping ML Scores to Calibrated Predictions |
callr | Call R from R |
calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |
calpassapi | R Interface to Access CalPASS API |
CalSim | The Calibration Simplex |
CAMAN | Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN |
CamelUp | 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics |
camsRad | Client for CAMS Radiation Service |
caMST | Mixed Computerized Adaptive Multistage Testing |
camtrapR | Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses |
cancensus | Access, Retrieve, and Work with Canadian Census Data and Geography |
cancerGI | Analyses of Cancer Gene Interaction |
cancerTiming | Estimation of Temporal Ordering of Cancer Abnormalities |
candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |
Canopy | Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing |
canprot | Compositional Analysis of Differentially Expressed Proteins in Cancer |
cansim | Accessing Statistics Canada Data Table and Vectors |
CANSIM2R | Directly Extracts Complete CANSIM Data Tables |
canvasXpress | Visualization Package for CanvasXpress in R |
canvasXpress.data | Datasets for the 'canvasXpress' Package |
cap | Covariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes |
caper | Comparative Analyses of Phylogenetics and Evolution in R |
capitalR | Capital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules |
capm | Companion Animal Population Management |
capn | Capital Asset Pricing for Nature |
CaPO4Sim | A Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis |
captioner | Numbers Figures and Creates Simple Captions |
captr | Client for the Captricity API |
capushe | CAlibrating Penalities Using Slope HEuristics |
capwire | Estimates population size from non-invasive sampling |
car | Companion to Applied Regression |
caracas | Computer Algebra |
caRamel | Automatic Calibration by Evolutionary Multi Objective Algorithm |
carat | Covariate-Adaptive Randomization for Clinical Trials |
CARBayes | Spatial Generalised Linear Mixed Models for Areal Unit Data |
CARBayesdata | Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages |
CARBayesST | Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data |
carbonate | Interact with 'carbon.js' |
carcass | Estimation of the Number of Fatalities from Carcass Searches |
carData | Companion to Applied Regression Data Sets |
cardidates | Identification of Cardinal Dates in Ecological Time Series |
cardioModel | Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies |
care | High-Dimensional Regression and CAR Score Variable Selection |
CARE1 | Statistical package for population size estimation in capture-recapture models |
careless | Procedures for Computing Indices of Careless Responding |
caret | Classification and Regression Training |
caretEnsemble | Ensembles of Caret Models |
carfima | Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data |
caribou | Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry |
CarletonStats | Functions for Statistics Classes at Carleton College |
CARLIT | Ecological Quality Ratios Calculation and Plot |
Carlson | Carlson Elliptic Integrals and Incomplete Elliptic Integrals |
caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |
carpenter | Build Common Tables of Summary Statistics for Reports |
caRpools | CRISPR AnalyzeR for Pooled CRISPR Screens |
carrier | Isolate Functions for Remote Execution |
CARRoT | Predicting Categorical and Continuous Outcomes Using One in Ten Rule |
CARS | Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference |
carSurv | Correlation-Adjusted Regression Survival (CARS) Scores |
cartograflow | Filtering Matrix for Flow Mapping |
cartogram | Create Cartograms with R |
cartography | Thematic Cartography |
cartools | Tools for Understanding Highway Performance |
carx | Censored Autoregressive Model with Exogenous Covariates |
Cascade | Selection, Reverse-Engineering and Prediction in Cascade Networks |
CascadeData | Experimental Data of Cascade Experiments in Genomics |
caschrono | S<e9>ries Temporelles Avec R |
cascsim | Casualty Actuarial Society Individual Claim Simulator |
casebase | Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression |
caseMatch | Identify Similar Cases for Qualitative Case Studies |
casen | Metodos De Estimacion Con Disenio Probabilistico y Estratificado en Encuesta CASEN (Estimation Methods with Probabilistic Stratified Sampling in CASEN Survey) |
casino | Play Casino Games |
CASMAP | Detection of Statistically Significant Combinations of SNPs in Association Mapping |
cassandRa | Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks |
CAST | 'caret' Applications for Spatial-Temporal Models |
castor | Efficient Phylogenetics on Large Trees |
cat | Analysis of categorical-variable datasets with missing values |
cat.dt | Computerized Adaptive Testing and Decision Trees |
catch | Covariate-Adjusted Tensor Classification in High-Dimensions |
catchr | Taking the Pain Out of Catching and Handling Conditions |
catcont | Test, Identify, Select and Mutate Categorical or Continuous Values |
catdap | Categorical Data Analysis Program Package |
catdata | Categorical Data |
CatDyn | Fishery Stock Assessment by Catch Dynamics Models |
cate | High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation |
categoryEncodings | Category Variable Encodings |
catenary | Fits a Catenary to Given Points |
CatEncoders | Encoders for Categorical Variables |
CateSelection | Categorical Variable Selection Methods |
catfun | Categorical Data Analysis |
cati | Community Assembly by Traits: Individuals and Beyond |
catIrt | An R Package for Simulating IRT-Based Computerized Adaptive Tests |
CATkit | Chronomics Analysis Toolkit (CAT): Periodicity Analysis |
catlearn | Formal Psychological Models of Categorization and Learning |
catmap | Case-Control and TDT Meta-Analysis Package |
catnet | Categorical Bayesian Network Inference |
caTools | Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc |
CatPredi | Optimal Categorisation of Continuous Variables in Prediction Models |
catR | Generation of IRT Response Patterns under Computerized Adaptive Testing |
CatReg | Solution Paths for Linear and Logistic Regression Models with SCOPE Penalty |
catseyes | Create Catseye Plots Illustrating the Normal Distribution of the Means |
catsim | Binary and Categorical Image Similarity Index |
catspec | Special models for categorical variables |
catSurv | Computerized Adaptive Testing for Survey Research |
CATT | The Cochran-Armitage Trend Test |
CATTexact | Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test |
cattonum | Encode Categorical Features |
causact | Accelerated Bayesian Analytics with DAGs |
causaldrf | Tools for Estimating Causal Dose Response Functions |
causaleffect | Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models |
CausalFX | Methods for Estimating Causal Effects from Observational Data |
CausalGAM | Estimation of Causal Effects with Generalized Additive Models |
CausalImpact | Inferring Causal Effects using Bayesian Structural Time-Series Models |
CausalKinetiX | Learning Stable Structures in Kinetic Systems |
causaloptim | An Interface to Specify Causal Graphs and Compute Bounds on Causal Effects |
CausalQueries | Make, Update, and Query Binary Causal Models |
causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |
causalweight | Causal Inference Based on Inverse Probability Weighting, Doubly Robust Estimation, and Double Machine Learning |
CautiousLearning | Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning |
CAvariants | Correspondence Analysis Variants |
CB2 | CRISPR Pooled Screen Analysis using Beta-Binomial Test |
cba | Clustering for Business Analytics |
cbanalysis | Coffee Break Descriptive Analysis |
cbar | Contextual Bayesian Anomaly Detection in R |
CBCgrps | Compare Baseline Characteristics Between Groups |
CBDA | Compressive Big Data Analytics |
cbinom | Continuous Analog of a Binomial Distribution |
cbird | Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization |
cblasr | The C Interface to 'BLAS' Routines |
CBPS | Covariate Balancing Propensity Score |
cbq | Conditional Binary Quantile Models |
cbsem | Simulation, Estimation and Segmentation of Composite Based Structural Equation Models |
cbsodataR | Statistics Netherlands (CBS) Open Data API Client |
CBSr | Fits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data |
CBT | Confidence Bound Target Algorithm |
CC | Control Charts |
CCA | Canonical correlation analysis |
ccafs | Client for 'CCAFS' 'GCM' Data |
CCAGFA | Bayesian Canonical Correlation Analysis and Group Factor Analysis |
CCAMLRGIS | Antarctic Spatial Data Manipulation |
ccaPP | (Robust) Canonical Correlation Analysis via Projection Pursuit |
cccd | Class Cover Catch Digraphs |
ccChooser | Developing a core collections |
cccp | Cone Constrained Convex Problems |
cccrm | Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures |
ccda | Combined Cluster and Discriminant Analysis |
ccdrAlgorithm | CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks |
cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |
cchsflow | Transforming and Harmonizing CCHS Variables |
cclust | Convex Clustering Methods and Clustering Indexes |
CCM | Correlation Classification Method |
ccmm | Compositional Mediation Model |
ccostr | Estimation of Mean Costs in Censored Data |
CCP | Significance Tests for Canonical Correlation Analysis (CCA) |
CCpop | One and two locus GWAS of binary phenotype with case-control-population design |
ccRemover | Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data |
ccrs | Correct and Cluster Response Style Biased Data |
ccss | Cluster Circular Systematic Sampling |
cctools | Tools for the Continuous Convolution Trick in Nonparametric Estimation |
CCTpack | Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications |
cdata | Fluid Data Transformations |
cdb | Reading and Writing Constant DataBases |
cdcatR | Cognitive Diagnostic Computerized Adaptive Testing |
cdcfluview | Retrieve Flu Season Data from the United States Centers for Disease Control and Prevention ('CDC') 'FluView' Portal |
cdcsis | Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference |
cde | Download Data from the Catchment Data Explorer Website |
cder | Interface to the California Data Exchange Center |
cdfquantreg | Quantile Regression for Random Variables on the Unit Interval |
CDFt | Statistical downscaling through CDF-transform |
CDLasso | Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression |
cdlei | Cause-Deleted Life Expectancy Improvement Procedure |
cdlTools | Tools to Download and Work with USDA Cropscape Data |
CDM | Cognitive Diagnosis Modeling |
CDNmoney | Components of Canadian Monetary and Credit Aggregates |
cdom | R Functions to Model CDOM Spectra |
cdparcoord | Top Frequency-Based Parallel Coordinates |
CDROM | Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data |
cds | Constrained Dual Scaling for Detecting Response Styles |
CDVine | Statistical Inference of C- And D-Vine Copulas |
CDVineCopulaConditional | Sampling from Conditional C- and D-Vine Copulas |
CEC | Cross-Entropy Clustering |
cec2013 | Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013 |
ced | The Compact Encoding Detector |
ceg | Chain Event Graph |
CEGO | Combinatorial Efficient Global Optimization |
celestial | Collection of Common Astronomical Conversion Routines and Functions |
cellOrigins | Finds RNASeq Source Tissues Using In Situ Hybridisation Data |
cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |
celltrackR | Motion Trajectory Analysis |
cellVolumeDist | Functions to fit cell volume distributions and thereby estimate cell growth rates and division times |
cellWise | Analyzing Data with Cellwise Outliers |
cem | Coarsened Exact Matching |
cemco | Fit 'CemCO' Algorithm |
CenBAR | Broken Adaptive Ridge Estimator for Censored Data in AFT Model |
CENFA | Climate and Ecological Niche Factor Analysis |
cenGAM | Censored Regression with Smooth Terms |
cenROC | Estimation of the Time-Dependent ROC Curve and AUC for Censored Survival Data |
censCov | Linear Regression with a Randomly Censored Covariate |
CensMFM | Finite Mixture of Multivariate Censored/Missing Data |
censNID | censored NID samples |
censorcopula | Estimate Parameter of Bivariate Copula |
censReg | Censored Regression (Tobit) Models |
CensRegMod | Fits Normal and Student-t Censored Regression Model |
CensSpatial | Censored Spatial Models |
Census2016 | Data from the Australian Census 2016 |
censusapi | Retrieve Data from the Census APIs |
censusGeography | Changes United States Census Geographic Code into Name of Location |
censusr | Collect Data from the Census API |
censusxy | Access the U.S. Census Bureau's Geocoding A.P.I. System |
censys | Tools to Query the 'Censys' API |
centiserve | Find Graph Centrality Indices |
centralplot | Show the Strength of Relationships Between Centre and Peripheral Items |
centrifugeR | Non-Trivial Balance of Centrifuge Rotors |
cents | Censored time series |
CEoptim | Cross-Entropy R Package for Optimization |
CePa | Centrality-Based Pathway Enrichment |
CepLDA | Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability |
cepp | Context Driven Exploratory Projection Pursuit |
cepR | Busca CEPs Brasileiros |
cepreader | Read 'CEP' and Legacy 'CANOCO' Files |
ceramic | Download Online Imagery Tiles |
CerioliOutlierDetection | Outlier Detection Using the Iterated RMCD Method of Cerioli (2010) |
CeRNASeek | Identification and Analysis of ceRNA Regulation |
cernn | Covariance Estimation Regularized by Nuclear Norm Penalties |
ceRtainty | Certainty Equivalent |
cetcolor | CET Perceptually Uniform Colour Maps |
ceterisParibus | Ceteris Paribus Profiles |
cfa | Configural Frequency Analysis (CFA) |
CFC | Cause-Specific Framework for Competing-Risk Analysis |
cfdecomp | Counterfactual Decomposition: MC Integration of the G-Formula |
CfEstimateQuantiles | Estimate quantiles using any order Cornish-Fisher expansion |
CFF | Simple Similarity for User-Based Collaborative Filtering Systems |
cffdrs | Canadian Forest Fire Danger Rating System |
CFilt | Collaborative Filtering by Reference Classes |
cfma | Causal Functional Mediation Analysis |
cfmortality | Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model |
cg | Compare Groups, Analytically and Graphically |
cgal4h | 'CGAL' Version 4 C++ Header Files |
cgam | Constrained Generalized Additive Model |
cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |
cgdsr | R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS) |
CGE | Computing General Equilibrium |
CGGP | Composite Grid Gaussian Processes |
cgh | Microarray CGH analysis using the Smith-Waterman algorithm |
cghRA | Array CGH Data Analysis and Visualization |
cglasso | L1-Penalized Censored Gaussian Graphical Models |
cglm | Fits Conditional Generalized Linear Models |
cgmanalysis | Clean and Analyze Continuous Glucose Monitor Data |
CGManalyzer | Continuous Glucose Monitoring Data Analyzer |
CGP | Composite Gaussian Process Models |
CGPfunctions | Powell Miscellaneous Functions for Teaching and Learning Statistics |
cgraph | Computational Graphs |
cgwtools | Miscellaneous Tools |
ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |
chandwich | Chandler-Bate Sandwich Loglikelihood Adjustment |
changedetection | Nonparametric Change Detection in Multivariate Linear Relationships |
changepoint | Methods for Changepoint Detection |
changepoint.geo | Geometrically Inspired Multivariate Changepoint Detection |
changepoint.np | Methods for Nonparametric Changepoint Detection |
changepointsHD | Change-Point Estimation for Expensive and High-Dimensional Models |
changepointsVar | Change-Points Detections for Changes in Variance |
ChangePointTaylor | Identify Changes in Mean |
ChangepointTesting | Change Point Estimation for Clustered Signals |
changer | Change R Package Name |
ChannelAttribution | Markov Model for Online Multi-Channel Attribution |
ChannelAttributionApp | Shiny Web Application for the Multichannel Attribution Problem |
Chaos01 | 0-1 Test for Chaos |
ChaosGame | Chaos Game |
ChargeTransport | Charge Transfer Rates and Charge Carrier Mobilities |
charlatan | Make Fake Data |
chartql | Simplified Language for Plots and Charts |
CHCN | Canadian Historical Climate Network |
cheatR | Catch Cheaters |
cheb | Discrete Linear Chebyshev Approximation |
chebpol | Multivariate Interpolation |
checkarg | Check the Basic Validity of a (Function) Argument |
CheckDigit | Calculate and verify check digits |
checkdown | Check-Fields and Check-Boxes for 'rmarkdown' |
checkLuhn | Checks if a Number is Valid Using the Luhn Algorithm |
checkmate | Fast and Versatile Argument Checks |
checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |
checkr | Check the Properties of Common R Objects |
cheddar | Analysis and Visualisation of Ecological Communities |
cheese | Tools for Working with Data During Statistical Analysis |
chemCal | Calibration Functions for Analytical Chemistry |
chemmodlab | A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models |
chemometrics | Multivariate Statistical Analysis in Chemometrics |
ChemometricsWithR | Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences |
ChemoSpec | Exploratory Chemometrics for Spectroscopy |
ChemoSpec2D | Exploratory Chemometrics for 2D Spectroscopy |
ChemoSpecUtils | Functions Supporting Packages ChemoSpec and ChemoSpec2D |
cherry | Multiple Testing Methods for Exploratory Research |
cherryblossom | Cherry Blossom Run Race Results |
chest | Change-in-Estimate Approach to Assess Confounding Effects |
CHFF | Closest History Flow Field Forecasting for Bivariate Time Series |
chi | The Chi Distribution |
chi2x3way | Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables |
chicane | Capture Hi-C Analysis Engine |
childesr | Accessing the 'CHILDES' Database |
childhoodmortality | Calculating Childhood Mortality Rates |
childsds | Data and Methods Around Reference Values in Pediatrics |
chilemapas | Mapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile) |
ChillModels | Processing Chill and Heat Models for Temperate Fruit Trees |
chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |
chinese.misc | Miscellaneous Tools for Chinese Text Mining and More |
chipPCR | Toolkit of Helper Functions to Pre-Process Amplification Data |
ChIPtest | Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data |
chirps | API Client for CHIRPS |
chisq.posthoc.test | A Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data |
chk | Check User-Supplied Function Arguments |
chlorpromazineR | Convert Antipsychotic Doses to Chlorpromazine Equivalents |
CHMM | Coupled Hidden Markov Models |
CHNCapitalStock | Compute Chinese Capital Stocks |
chngpt | Estimation and Hypothesis Testing for Threshold Regression |
CHNOSZ | Thermodynamic Calculations and Diagrams for Geochemistry |
choiceDes | Design Functions for Choice Studies |
ChoiceModelR | Choice Modeling in R |
cholera | Amend, Augment and Aid Analysis of John Snow's Cholera Map |
CholWishart | Cholesky Decomposition of the Wishart Distribution |
choplump | Choplump tests |
chopthin | The Chopthin Resampler |
ChoR | Chordalysis R Package |
chords | Estimation in Respondent Driven Samples |
choroplethr | Simplify the Creation of Choropleth Maps in R |
choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |
choroplethrMaps | Contains Maps Used by the 'choroplethr' Package |
chorrrds | Music Chords Extraction |
christmas | Generation of Christmas Cards |
chromer | Interface to Chromosome Counts Database API |
chromoMap | Interactive Visualization and Mapping of Chromosomes |
chromoR | Analysis of chromosomal interactions data (correction, segmentation and comparison) |
chromseq | Split Chromosome 'Fasta' File |
chron | Chronological Objects which can Handle Dates and Times |
chronosphere | Earth System History Variables |
CHsharp | Choi and Hall Style Data Sharpening |
chunked | Chunkwise Text-File Processing for 'dplyr' |
chunkhooks | Chunk Hooks for 'R Markdown' |
chunkR | Read Tables in Chunks |
CIAAWconsensus | Isotope Ratio Meta-Analysis |
cicerone | Provide Tours of 'Shiny' Applications |
CIEE | Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations |
CIFsmry | Weighted summary of cumulative incidence functions |
cifti | Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files |
CIM | Compositional Impact of Migration |
cimir | Interface to the CIMIS Web API |
CIMTx | Causal Inference for Multiple Treatments with a Binary Outcome |
cin | Causal Inference for Neuroscience |
CINID | Curculionidae INstar IDentification |
CINNA | Deciphering Central Informative Nodes in Network Analysis |
cinterpolate | Interpolation From C |
CIplot | Functions to Plot Confidence Interval |
cir | Centered Isotonic Regression and Dose-Response Utilities |
circlize | Circular Visualization |
CircMLE | Maximum Likelihood Analysis of Circular Data |
CircNNTSR | Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models |
CircOutlier | Detection of Outliers in Circular-Circular Regression |
CircSpaceTime | Spatial and Spatio-Temporal Bayesian Model for Circular Data |
CircStats | Circular Statistics, from "Topics in Circular Statistics" (2001) |
circular | Circular Statistics |
CircularDDM | Circular Drift-Diffusion Model |
circumplex | Analysis and Visualization of Circular Data |
cIRT | Choice Item Response Theory |
CISE | Common and Individual Structure Explained for Multiple Graphs |
cit | Causal Inference Test |
CITAN | CITation ANalysis Toolpack |
citation | Software Citation Tools |
citbcmst | CIT Breast Cancer Molecular SubTypes Prediction |
citccmst | CIT Colon Cancer Molecular SubTypes Prediction |
Cite | An RStudio Addin to Insert BibTex Citation in Rmarkdown Documents |
citecorp | Client for the Open Citations Corpus |
ciTools | Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models |
citr | 'RStudio' Add-in to Insert Markdown Citations |
CityPlot | Visualization of structure and contents of a database |
CityWaterBalance | Track Flows of Water Through an Urban System |
ciuupi | Confidence Intervals Utilizing Uncertain Prior Information |
civis | R Client for the 'Civis Platform API' |
CJAMP | Copula-Based Joint Analysis of Multiple Phenotypes |
cjoint | AMCE Estimator for Conjoint Experiments |
ckanr | Client for the Comprehensive Knowledge Archive Network ('CKAN') API |
CKAT | Composite Kernel Association Test for Pharmacogenetics Studies |
CKLRT | Composite Kernel Machine Regression Based on Likelihood Ratio Test |
Ckmeans.1d.dp | Optimal, Fast, and Reproducible Univariate Clustering |
CLA | Critical Line Algorithm in Pure R |
Claddis | Measuring Morphological Diversity and Evolutionary Tempo |
cladoRcpp | C++ Implementations of Phylogenetic Cladogenesis Calculations |
clam | Classical Age-Depth Modelling of Cores from Deposits |
clampSeg | Idealisation of Patch Clamp Recordings |
ClamR | Time Series Modeling for Climate Change Proxies |
clarifai | Access to Clarifai API |
clarkeTest | Distribution-Free Tests of Non-Nested Models |
class | Functions for Classification |
ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |
ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |
classGraph | Construct Graphs of S4 Class Hierarchies |
classifierplots | Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots |
classifly | Explore classification models in high dimensions |
classInt | Choose Univariate Class Intervals |
classyfireR | R Interface to the ClassyFire RESTful API |
cld2 | Google's Compact Language Detector 2 |
cld3 | Google's Compact Language Detector 3 |
clda | Convolution-Based Linear Discriminant Analysis |
clean | Fast and Easy Data Cleaning |
CleanBSequences | Clean Biological Sequences |
cleancall | C Resource Cleanup via Exit Handlers |
cleandata | To Inspect and Manipulate Data; and to Keep Track of This Process |
cleaner | Fast and Easy Data Cleaning |
cleanerR | How to Handle your Missing Data |
cleangeo | Cleaning Geometries from Spatial Objects |
cleanNLP | A Tidy Data Model for Natural Language Processing |
cleanr | Helps You to Code Cleaner |
clere | Simultaneous Variables Clustering and Regression |
clespr | Composite Likelihood Estimation for Spatial Data |
clhs | Conditioned Latin Hypercube Sampling |
cli | Helpers for Developing Command Line Interfaces |
cliapp | Create Rich Command Line Applications |
ClickClust | Model-Based Clustering of Categorical Sequences |
ClickClustCont | Mixtures of Continuous Time Markov Models |
clickR | Fix Data and Create Report Tables from Different Objects |
clickstream | Analyzes Clickstreams Based on Markov Chains |
clifford | Arbitrary Dimensional Clifford Algebras |
clifro | Easily Download and Visualise Climate Data from CliFlo |
CliftLRD | Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series |
clikcorr | Censoring Data and Likelihood-Based Correlation Estimation |
climaemet | Climate AEMET Tools |
climate | Interface to Download Meteorological (and Hydrological) Datasets |
climateStability | Estimating Climate Stability from Climate Model Data |
climatol | Climate Tools (Series Homogenization and Derived Products) |
climatrends | Climate Variability Indices for Ecological Modelling |
ClimClass | Climate Classification According to Several Indices |
climdex.pcic | PCIC Implementation of Climdex Routines |
ClimDown | Climate Downscaling Library for Daily Climate Model Output |
clime | Constrained L1-minimization for Inverse (covariance) Matrix Estimation |
climextRemes | Tools for Analyzing Climate Extremes |
ClimInd | Climate Indices |
ClimMobTools | API Client for the 'ClimMob' Platform |
ClimProjDiags | Set of Tools to Compute Various Climate Indices |
climwin | Climate Window Analysis |
clinDR | Simulation and Analysis Tools for Clinical Dose Response Modeling |
clinfun | Clinical Trial Design and Data Analysis Functions |
ClinicalTrialSummary | Summary Measures for Clinical Trials with Survival Outcomes |
ClinicalUtilityRecal | Recalibration Methods for Improved Clinical Utility of Risk Scores |
clinPK | Clinical Pharmacokinetics Toolkit |
clinsig | Clinical Significance Functions |
clinUtiDNA | Clinical Utility of DNA Testing |
clipp | Calculating Likelihoods by Pedigree Paring |
clipr | Read and Write from the System Clipboard |
CliquePercolation | Clique Percolation for Networks |
clisymbols | Unicode Symbols at the R Prompt |
CLME | Constrained Inference for Linear Mixed Effects Models |
clogitboost | Boosting Conditional Logit Model |
clogitL1 | Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties |
clogitLasso | Sparse Conditional Logistic Regression for Matched Studies |
CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data |
CLONETv2 | Clonality Estimates in Tumor |
clordr | Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data |
cloudml | Interface to the Google Cloud Machine Learning Platform |
cloudUtil | Cloud Utilization Plots |
clpAPI | R Interface to C API of COIN-or Clp |
clr | Curve Linear Regression via Dimension Reduction |
CLSOCP | A smoothing Newton method SOCP solver |
clttools | Central Limit Theorem Experiments (Theoretical and Simulation) |
clue | Cluster Ensembles |
ClueR | Cluster Evaluation |
CluMP | Clustering of Micro Panel Data |
ClusBoot | Bootstrap Clustering |
cluscov | Clustered Covariate Regression |
clusrank | Wilcoxon Rank Sum Test for Clustered Data |
ClussCluster | Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data |
clust.bin.pair | Statistical Methods for Analyzing Clustered Matched Pair Data |
ClustBlock | Clustering of Datasets |
clustcurv | Determining Groups in Multiples Curves |
clustDRM | Clustering Dose-Response Curves and Fitting Appropriate Models to Them |
clustEff | Clusters of Effects Curves in Quantile Regression Models |
cluster | "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. |
cluster.datasets | Cluster Analysis Data Sets |
Cluster.OBeu | Cluster Analysis 'OpenBudgets.eu' |
clusterability | Performs Tests for Cluster Tendency of a Data Set |
ClusterBootstrap | Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap |
clusterCrit | Clustering Indices |
clusteredinterference | Causal Effects from Observational Studies with Clustered Interference |
ClusteredMutations | Location and Visualization of Clustered Somatic Mutations |
clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |
clusterGenomics | Identifying clusters in genomics data by recursive partitioning |
clusterhap | Clustering Genotypes in Haplotypes |
Clustering | Execution of Multiple Clustering Algorithm |
clustering.sc.dp | Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint |
clustermole | Unbiased Single-Cell Transcriptomic Data Cell Type Identification |
clustermq | Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) |
clusternomics | Integrative Clustering for Heterogeneous Biomedical Datasets |
clusternor | A Parallel Clustering Non-Uniform Memory Access ('NUMA') Optimized Package |
clusterPower | Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials |
ClusterR | Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering |
ClusterRankTest | Rank Tests for Clustered Data |
clusterRepro | Reproducibility of Gene Expression Clusters |
clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |
clusterSim | Searching for Optimal Clustering Procedure for a Data Set |
ClusterStability | Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions |
clustertend | Check the Clustering Tendency |
clusteval | Evaluation of Clustering Algorithms |
ClustGeo | Hierarchical Clustering with Spatial Constraints |
ClustImpute | K-means clustering with build-in missing data imputation |
clustMD | Model Based Clustering for Mixed Data |
clustMixType | k-Prototypes Clustering for Mixed Variable-Type Data |
ClustMMDD | Variable Selection in Clustering by Mixture Models for Discrete Data |
ClustOfVar | Clustering of Variables |
clustrd | Methods for Joint Dimension Reduction and Clustering |
clustree | Visualise Clusterings at Different Resolutions |
clustringr | Cluster Strings by Edit-Distance |
CLUSTShiny | Interactive Document for Working with Cluster Analysis |
clustsig | Significant Cluster Analysis |
ClustVarLV | Clustering of Variables Around Latent Variables |
clustvarsel | Variable Selection for Gaussian Model-Based Clustering |
ClusVis | Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering |
clv | Cluster Validation Techniques |
clValid | Validation of Clustering Results |
CLVTools | Tools for Customer Lifetime Value Estimation |
cmaes | Covariance Matrix Adapting Evolutionary Strategy |
cmaesr | Covariance Matrix Adaptation Evolution Strategy |
CMapViz | Representation Tool For Output Of Connectivity Map (CMap) Analysis |
CMatching | Matching Algorithms for Causal Inference with Clustered Data |
CMC | Cronbach-Mesbah Curve |
cmce | Computer Model Calibration for Deterministic and Stochastic Simulators |
cmenet | Bi-Level Selection of Conditional Main Effects |
CMF | Collective Matrix Factorization |
CMLS | Constrained Multivariate Least Squares |
cmm | Categorical Marginal Models |
cmmr | CEU Mass Mediator RESTful API |
cmna | Computational Methods for Numerical Analysis |
cmocean | Beautiful Colour Maps for Oceanography |
CMplot | Circle Manhattan Plot |
cmprsk | Subdistribution Analysis of Competing Risks |
cmprskQR | Analysis of Competing Risks Using Quantile Regressions |
cmrutils | Misc Functions of the Center for Mathematical Research |
cmsaf | Tools for CM SAF NetCDF Data |
CMShiny | Interactive Document for Working with Confusion Matrix |
cmstatr | Statistical Methods for Composite Material Data |
cmvnorm | The Complex Multivariate Gaussian Distribution |
cna | Causal Modeling with Coincidence Analysis |
cnaOpt | Optimizing Consistency and Coverage in Configurational Causal Modeling |
cnbdistr | Conditional Negative Binomial Distribution |
cncaGUI | Canonical Non-Symmetrical Correspondence Analysis in R |
CNLTreg | Complex-Valued Wavelet Lifting for Signal Denoising |
CNLTtsa | Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis |
CNOGpro | Copy Numbers of Genes in prokaryotes |
cNORM | Continuous Norming |
CNprep | Pre-process DNA Copy Number (CN) Data for Detection of CN Events |
CNull | Fast Algorithms for Frequency-Preserving Null Models in Ecology |
cnum | Chinese Numerals Processing |
CNVScope | A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization |
coala | A Framework for Coalescent Simulation |
coalescentMCMC | MCMC Algorithms for the Coalescent |
coalitions | Bayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies |
coarseDataTools | Analysis of Coarsely Observed Data |
cobalt | Covariate Balance Tables and Plots |
cobiclust | Biclustering via Latent Block Model Adapted to Overdispersed Count Data |
COBRA | Nonlinear Aggregation of Predictors |
cobs | Constrained B-Splines (Sparse Matrix Based) |
coca | Cluster-of-Clusters Analysis |
cocktailApp | 'shiny' App to Discover Cocktails |
CoClust | Copula Based Cluster Analysis |
COCONUT | COmbat CO-Normalization Using conTrols (COCONUT) |
cocor | Comparing Correlations |
cocoreg | Extract Shared Variation in Collections of Data Sets Using Regression Models |
cocorresp | Co-Correspondence Analysis Methods |
cocron | Statistical Comparisons of Two or more Alpha Coefficients |
coda | Output Analysis and Diagnostics for MCMC |
coda.base | A Basic Set of Functions for Compositional Data Analysis |
codadiags | Markov chain Monte Carlo burn-in based on "bridge" statistics |
codalm | Transformation-Free Linear Regression for Compositional Outcomes and Predictors |
CodataGS | Genomic Prediction Using SNP Codata |
cOde | Automated C Code Generation for 'deSolve', 'bvpSolve' |
codebook | Automatic Codebooks from Metadata Encoded in Dataset Attributes |
CodeDepends | Analysis of R Code for Reproducible Research and Code Comprehension |
codemetar | Generate 'CodeMeta' Metadata for R Packages |
codep | Multiscale Codependence Analysis |
codetools | Code Analysis Tools for R |
codexcopd | The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations |
codified | Produce Standard/Formalized Demographics Tables |
CoDiNA | Co-Expression Differential Network Analysis |
codingMatrices | Alternative Factor Coding Matrices for Linear Model Formulae |
codyn | Community Dynamics Metrics |
coefficientalpha | Robust Coefficient Alpha and Omega with Missing and Non-Normal Data |
coefplot | Plots Coefficients from Fitted Models |
coenocliner | Coenocline Simulation |
coenoflex | Gradient-Based Coenospace Vegetation Simulator |
coexist | Species coexistence modeling and analysis |
cofad | Contrast Analyses for Factorial Designs |
cofeatureR | Generate Cofeature Matrices |
CoFRA | Complete Functional Regulation Analysis |
coga | Convolution of Gamma Distributions |
cogmapr | Cognitive Mapping Tools Based on Coding of Textual Sources |
cognitoR | Authentication for 'Shiny' Apps with 'Amazon Cognito' |
cohorttools | Cohort Data Analyses |
coil | Contextualization and Evaluation of COI-5P Barcode Data |
CoImp | Copula Based Imputation Method |
coin | Conditional Inference Procedures in a Permutation Test Framework |
coindeskr | Access 'CoinDesk' Bitcoin Price Index API |
coinmarketcapr | Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap |
CoinMinD | Simultaneous Confidence Interval for Multinomial Proportion |
Coinprofile | Coincident Profile |
cointmonitoR | Consistent Monitoring of Stationarity and Cointegrating Relationships |
cointReg | Parameter Estimation and Inference in a Cointegrating Regression |
cold | Count Longitudinal Data |
colf | Constrained Optimization on Linear Function |
CollapsABEL | Generalized CDH (GCDH) Analysis |
collapse | Advanced and Fast Data Transformation |
CollapseLevels | Collapses Levels, Computes Information Value and WoE |
collapsibleTree | Interactive Collapsible Tree Diagrams using 'D3.js' |
collectArgs | Quickly and Neatly Collect Arguments from One Environment to Pass to Another |
collections | High Performance Container Data Types |
collector | Quantified Risk Assessment Data Collection |
collidr | Check for Namespace Collisions with Other Packages and Functions on CRAN |
CollocInfer | Collocation Inference for Dynamic Systems |
collpcm | Collapsed Latent Position Cluster Model for Social Networks |
collUtils | Auxiliary Package for Package 'CollapsABEL' |
colmozzie | Dengue Cases and Climate Variables in Colombo Sri Lanka |
coloc | Colocalisation Tests of Two Genetic Traits |
colocalized | Clusters of Colocalized Sequences |
colocr | Conduct Co-Localization Analysis of Fluorescence Microscopy Images |
colorBlindness | Safe Color Set for Color Blindness |
colorDF | Colorful Data Frames in R Terminal |
colordistance | Distance Metrics for Image Color Similarity |
coloredICA | Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis |
colorednoise | Simulate Temporally Autocorrelated Populations |
colorfindr | Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images |
colorfulVennPlot | Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data |
colorhcplot | Colorful Hierarchical Clustering Dendrograms |
colorist | Coloring Wildlife Distributions in Space-Time |
colormap | Color Palettes using Colormaps Node Module |
ColorPalette | Color Palettes Generator |
colorpatch | Optimized Rendering of Fold Changes and Confidence Values |
colorr | Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams |
colorRamps | Builds color tables |
colorscience | Color Science Methods and Data |
colorspace | A Toolbox for Manipulating and Assessing Colors and Palettes |
colorSpec | Color Calculations with Emphasis on Spectral Data |
colortools | Tools for colors in a Hue-Saturation-Value (HSV) color model |
colourlovers | R Client for the COLOURlovers API |
colourpicker | A Colour Picker Tool for Shiny and for Selecting Colours in Plots |
colourvalues | Assigns Colours to Values |
colourvision | Colour Vision Models |
colr | Functions to Select and Rename Data |
colt | Command-Line Color Themes |
comat | Creates Co-Occurrence Matrices of Spatial Data |
comato | Analysis of Concept Maps and Concept Landscapes |
COMBAT | A Combined Association Test for Genes using Summary Statistics |
combinat | combinatorics utilities |
CombinePortfolio | Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies |
CombinePValue | Combine a Vector of Correlated p-values |
CombinS | Construction Methods of some Series of PBIB Designs |
combiter | Combinatorics Iterators |
CombMSC | Combined Model Selection Criteria |
comclim | Community Climate Statistics |
cometExactTest | Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm |
cometr | 'Comet' API for R |
comf | Functions for Thermal Comfort Research |
ComICS | Computational Methods for Immune Cell-Type Subsets |
commandr | Command pattern in R |
CommEcol | Community Ecology Analyses |
commentr | Print Nicely Formatted Comments for Use in Script Files |
CommonJavaJars | Useful Libraries for Building a Java Based GUI under R |
commonmark | High Performance CommonMark and Github Markdown Rendering in R |
CommonMean.Copula | Common Mean Vector under Copula Models |
commonsMath | JAR Files of the Apache Commons Mathematics Library |
CommT | Comparative Phylogeographic Analysis using the Community Tree Framework |
CommunityCorrelogram | Ecological Community Correlogram |
comorbidity | Computing Comorbidity Scores |
Comp2ROC | Compare Two ROC Curves that Intersect |
Compack | Regression with Compositional Covariates |
compactr | Creates empty plots with compact axis notation |
compare | Comparing Objects for Differences |
compareC | Compare Two Correlated C Indices with Right-censored Survival Outcome |
CompareCausalNetworks | Interface to Diverse Estimation Methods of Causal Networks |
compareDF | Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure |
compareGroups | Descriptive Analysis by Groups |
compareODM | comparison of medical forms in CDISC ODM format |
comparer | Compare Output and Run Time |
CompareTests | Correct for Verification Bias in Diagnostic Accuracy & Agreement |
comparison | Multivariate Likelihood Ratio Calculation and Evaluation |
ComparisonCR | Comparison of Cumulative Incidence Between Two Groups Under Competing Risks |
ComparisonSurv | Comparison of Survival Curves Between Two Groups |
compas | Conformational Manipulations of Protein Atomic Structures |
compboost | C++ Implementation of Component-Wise Boosting |
CompDist | Multisection Composite Distributions |
compendiumdb | Tools for Retrieval and Storage of Functional Genomics Data |
comperank | Ranking Methods for Competition Results |
comperes | Manage Competition Results |
competitiontoolbox | A Graphical User Interface for Antitrust and Trade Practitioners |
compHclust | Complementary Hierarchical Clustering |
Compind | Composite Indicators Functions |
completejourney | Retail Shopping Data |
complexity | Calculate the Proportion of Permutations in Line with an Informative Hypothesis |
complexplus | Functions of Complex or Real Variable |
complmrob | Robust Linear Regression with Compositional Data as Covariates |
CompLognormal | Functions for actuarial scientists |
COMPoissonReg | Conway-Maxwell Poisson (COM-Poisson) Regression |
Compositional | Compositional Data Analysis |
compositions | Compositional Data Analysis |
compound.Cox | Univariate Feature Selection and Compound Covariate for Predicting Survival |
CompoundEvents | Statistical Modeling of Compound Events |
Compounding | Computing Continuous Distributions |
CompQuadForm | Distribution Function of Quadratic Forms in Normal Variables |
CompR | Paired Comparison Data Analysis |
CompRandFld | Composite-Likelihood Based Analysis of Random Fields |
comprehenr | List Comprehensions |
compstatr | Tools for St. Louis Crime Data |
compute.es | Compute Effect Sizes |
comtradr | Interface with the United Nations Comtrade API |
con2aqi | Calculate the AQI from Pollutant Concentration |
Conake | Continuous Associated Kernel Estimation |
concatenate | Human-Friendly Text from Unknown Strings |
concaveman | A Very Fast 2D Concave Hull Algorithm |
conclust | Pairwise Constraints Clustering |
ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |
concor | Concordance |
concordance | Product Concordance |
concorR | CONCOR and Supplemental Functions |
concreg | Concordance Regression |
CONCUR | Copy Number Profile Curve-Based Association Test |
concurve | Computes and Plots Compatibility (Confidence) Intervals, P-Values, S-Values, & Likelihood Intervals to Form Consonance, Surprisal, & Likelihood Functions |
cond | Approximate Conditional Inference for Logistic and Loglinear Models |
condformat | Conditional Formatting in Data Frames |
condGEE | Parameter estimation in conditional GEE for recurrent event gap times |
CondIndTests | Nonlinear Conditional Independence Tests |
condir | Computation of P Values and Bayes Factors for Conditioning Data |
conditionz | Control How Many Times Conditions are Thrown |
condmixt | Conditional Density Estimation with Neural Network Conditional Mixtures |
condMVNorm | Conditional Multivariate Normal Distribution |
CONDOP | Condition-Dependent Operon Predictions |
CondReg | Condition Number Regularized Covariance Estimation |
condSURV | Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data |
condusco | Query-Driven Pipeline Execution and Query Templates |
condvis | Conditional Visualization for Statistical Models |
condvis2 | Conditional Visualization for Statistical Models |
coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |
conf | Visualization and Analysis of Statistical Measures of Confidence |
conf.design | Construction of factorial designs |
confidence | Confidence Estimation of Environmental State Classifications |
config | Manage Environment Specific Configuration Values |
ConfigParser | Package to Parse an INI File, Including Variable Interpolation |
configr | An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML) |
configural | Multivariate Profile Analysis |
confinterpret | Descriptive Interpretations of Confidence Intervals |
confintr | Confidence Intervals |
ConfIntVariance | Confidence Interval for the Univariate Population Variance without Normality Assumption |
conflicted | An Alternative Conflict Resolution Strategy |
conflr | Client for 'Confluence' API |
conformalClassification | Transductive and Inductive Conformal Predictions for Classification Problems |
ConfoundedMeta | Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses |
confoundr | Diagnostics for Confounding of Time-Varying and Other Joint Exposures |
confreq | Configural Frequencies Analysis Using Log-Linear Modeling |
confSAM | Estimates and Bounds for the False Discovery Proportion, by Permutation |
CongreveLamsdell2016 | Distance Metrics for Trees Generated by Congreve and Lamsdell |
conicfit | Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov |
conics | Plot Conics |
Conigrave | Flexible Tools for Multiple Imputation |
conjoint | An Implementation of Conjoint Analysis Method |
ConjointChecks | A package to check the cancellation axioms of conjoint measurement |
conjurer | A Parametric Method for Generating Synthetic Data |
connections | Integrates with the 'RStudio' Connections Pane and 'pins' |
ConnMatTools | Tools for Working with Connectivity Data |
conogive | Congeneric Normal-Ogive Model |
conover.test | Conover-Iman Test of Multiple Comparisons Using Rank Sums |
conquer | Convolution-Type Smoothed Quantile Regression |
conquestr | An R Front End for 'ACER ConQuest' |
ConR | Computation of Parameters Used in Preliminary Assessment of Conservation Status |
ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |
ConsRank | Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach |
ConsReg | Fits Regression & ARMA Models Subject to Constraints to the Coefficient |
constants | Reference on Constants, Units and Uncertainty |
constellation | Identify Event Sequences Using Time Series Joins |
constrainedKriging | Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging |
conStruct | Models Spatially Continuous and Discrete Population Genetic Structure |
contact | Creating Contact and Social Networks |
container | Deque, Set, and Dict - R6 Based Container Classes with Iterators |
ContaminatedMixt | Clustering and Classification with the Contaminated Normal |
contextual | Simulation and Analysis of Contextual Multi-Armed Bandit Policies |
contfrac | Continued Fractions |
conting | Bayesian Analysis of Contingency Tables |
contoureR | Contouring of Non-Regular Three-Dimensional Data |
ContourFunctions | Create Contour Plots from Data or a Function |
contourPlot | Plots x,y,z Co-Ordinates in a Contour Map |
contrast | A Collection of Contrast Methods |
contribution | A Tiny Contribution Table Generator Based on 'ggplot2' |
control | A Control Systems Toolbox |
controlTest | Quantile Comparison for Two-Sample Right-Censored Survival Data |
ConvergenceClubs | Finding Convergence Clubs |
ConvergenceConcepts | Seeing Convergence Concepts in Action |
convergEU | Monitoring Convergence of EU Countries |
convertGraph | Convert Graphical Files Format |
convertr | Convert Between Units |
convevol | Analysis of Convergent Evolution |
convexjlr | Disciplined Convex Programming in R using 'Convex.jl' |
convey | Income Concentration Analysis with Complex Survey Samples |
convoSPAT | Convolution-Based Nonstationary Spatial Modeling |
cooccur | Probabilistic Species Co-Occurrence Analysis in R |
cooccurNet | Co-Occurrence Network |
coop | Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations |
CoopGame | Important Concepts of Cooperative Game Theory |
coopProductGame | Cooperative Aspects of Linear Production Programming Problems |
cooptrees | Cooperative aspects of optimal trees in weighted graphs |
CoordinateCleaner | Automated Cleaning of Occurrence Records from Biological Collections |
copBasic | General Bivariate Copula Theory and Many Utility Functions |
copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |
CopCTS | Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits |
cope | Coverage Probability Excursion (CoPE) Sets |
copent | Estimating Copula Entropy |
coppeCosenzaR | COPPE-Cosenza Fuzzy Hierarchy Model |
coprimary | Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials |
cops | Cluster Optimized Proximity Scaling |
copula | Multivariate Dependence with Copulas |
Copula.Markov | Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series |
Copula.Markov.survival | Copula Markov Model with Dependent Censoring |
Copula.surv | Association Analysis of Bivariate Survival Data Based on Copulas |
CopulaCenR | Copula-Based Regression Models for Bivariate Censored Data |
copulaData | Data Sets for Copula Modeling |
CopulaDTA | Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies |
copulaedas | Estimation of Distribution Algorithms Based on Copulas |
CopulaREMADA | Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies |
CopyDetect | Computing Response Similarity Indices for Multiple-Choice Tests |
coRanking | Co-Ranking Matrix |
corazon | Apply 'colorffy' Color Gradients Within 'shiny' Elements |
Corbi | Collection of Rudimentary Bioinformatics Tools |
CorBin | Generate High-Dimensional Binary Data with Correlation Structures |
corclass | Correlational Class Analysis |
cord | Community Estimation in G-Models via CORD |
CorDiff | Set-Based Differential Covariance Testing for Genomics |
cordillera | Calculation of the OPTICS Cordillera |
CORE | Cores of Recurrent Events |
coreCT | Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging |
corehunter | Multi-Purpose Core Subset Selection |
CORElearn | Classification, Regression and Feature Evaluation |
corels | R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner |
coreNLP | Wrappers Around Stanford CoreNLP Tools |
coreSim | Core Functionality for Simulating Quantities of Interest from Generalised Linear Models |
coreTDT | TDT for compound heterozygous and recessive models |
corHMM | Hidden Markov Models of Character Evolution |
corkscrew | Preprocessor for Data Modeling |
corlink | Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields |
CORM | The Clustering of Regression Models Method |
CornerstoneR | Collection of Scripts for Interface Between 'Cornerstone' and 'R' |
cornet | Elastic Net with Dichotomised Outcomes |
coroICA | Confounding Robust Independent Component Analysis for Noisy and Grouped Data |
coronavirus | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset |
corpcor | Efficient Estimation of Covariance and (Partial) Correlation |
corpora | Statistics and Data Sets for Corpus Frequency Data |
CorporaCoCo | Corpora Co-Occurrence Comparison |
corporaexplorer | A 'Shiny' App for Exploration of Text Collections |
CoRpower | Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials |
corpus | Text Corpus Analysis |
corpustools | Managing, Querying and Analyzing Tokenized Text |
corr2D | Implementation of 2D Correlation Analysis in R |
CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |
corrcoverage | Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping |
corrDNA | Finding Associations in Position-Wise Aligned DNA Sequence Dataset |
correctedAUC | Correcting AUC for Measurement Error |
CorrectedFDR | Correcting False Discovery Rates |
CorrectOverloadedPeaks | Correct Overloaded Peaks from GC-APCI-MS Data |
corregp | Functions and Methods for Correspondence Regression |
correlation | Methods for Correlation Analysis |
correlationfunnel | Speed Up Exploratory Data Analysis (EDA) with the Correlation Funnel |
correlbinom | Correlated Binomial Probabilities |
corrgram | Plot a Correlogram |
corrgrapher | Explore Correlations Between Variables in a Machine Learning Model |
CorrMixed | Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models |
corrplot | Visualization of a Correlation Matrix |
corrr | Correlations in R |
corrsieve | CorrSieve |
CorrToolBox | Modeling Correlational Magnitude Transformations in Discretization Contexts |
corset | Arbitrary Bounding of Series and Time Series Objects |
cort | Some Empiric and Nonparametric Copula Models |
corTest | Robust Tests for Equal Correlation |
corto | Inference of Gene Regulatory Networks |
corTools | Tools for processing data after a Genome Wide Association Study |
corx | Create and Format Correlation Matrices |
cosa | Bound Constrained Optimal Sample Allocation |
COSINE | COndition SpecIfic sub-NEtwork |
cosinor | Tools for estimating and predicting the cosinor model |
cosinor2 | Extended Tools for Cosinor Analysis of Rhythms |
cosmoFns | Functions for cosmological distances, times, luminosities, etc |
CoSMoS | Complete Stochastic Modelling Solution |
cosso | Fit Regularized Nonparametric Regression Models Using COSSO Penalty |
COST | Copula-Based Semiparametric Models for Spatio-Temporal Data |
costat | Time Series Costationarity Determination |
costsensitive | Cost-Sensitive Multi-Class Classification |
CosW | The CosW Distribution |
cotram | Count Transformation Models |
cotrend | Consistent Co-Trending Rank Selection |
couchDB | Connect to and Work with CouchDB Databases |
COUNT | Functions, Data and Code for Count Data |
countcolors | Locates and Counts Pixels Within Color Range(s) in Images |
Counterfactual | Estimation and Inference Methods for Counterfactual Analysis |
countfitteR | Comprehensive Automatized Evaluation of Distribution Models for Count Data |
countgmifs | Discrete Response Regression for High-Dimensional Data |
countHMM | Penalized Estimation of Flexible Hidden Markov Models for Time Series of Counts |
Countr | Flexible Univariate Count Models Based on Renewal Processes |
countrycode | Convert Country Names and Country Codes |
CountsEPPM | Mean and Variance Modeling of Count Data |
countToFPKM | Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM) |
countTransformers | Transform Counts in RNA-Seq Data Analysis |
countyfloods | Quantify United States County-Level Flood Measurements |
countytimezones | Convert from UTC to Local Time for United States Counties |
countyweather | Compiles Meterological Data for U.S. Counties |
COUSCOus | A Residue-Residue Contact Detecting Method |
covafillr | Local Polynomial Regression of State Dependent Covariates in State-Space Models |
covatest | Tests on Properties of Space-Time Covariance Functions |
covBM | Brownian Motion Processes for 'nlme'-Models |
CovCombR | Combine Partial Covariance / Relationship Matrices |
coveffectsplot | Produce Forest Plots to Visualize Covariate Effects |
covequal | Test for Equality of Covariance Matrices |
covfefe | Covfefy Any Word, Sentence or Speech |
covglasso | Sparse Covariance Matrix Estimation |
COVID19 | R Interface to COVID-19 Data Hub |
covid19.analytics | Load and Analyze Live Data from the CoViD-19 Pandemic |
covid19dbcand | Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format |
covid19france | Cases of COVID-19 in France |
covid19italy | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset |
covid19mobility | Fetches Data on Covid-19 Mobility Trends from Different Sources |
covid19nytimes | Pulls the Covid-19 Data from the New York Times Public Data Source |
covid19us | Cases of COVID-19 in the United States |
covidregionaldata | Subnational Data for the Covid-19 Outbreak |
covLCA | Latent Class Models with Covariate Effects on Underlying and Measured Variables |
covr | Test Coverage for Packages |
covreg | A simultaneous regression model for the mean and covariance |
covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |
CovSel | Model-Free Covariate Selection |
CovSelHigh | Model-Free Covariate Selection in High Dimensions |
covsep | Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable |
covsim | VITA and IG Simulation for Given Covariance and Marginals |
covTestR | Covariance Matrix Tests |
CovTools | Statistical Tools for Covariance Analysis |
cowbell | Performs Segmented Linear Regression on Two Independent Variables |
cowplot | Streamlined Plot Theme and Plot Annotations for 'ggplot2' |
cowsay | Messages, Warnings, Strings with Ascii Animals |
CoxBoost | Cox models by likelihood based boosting for a single survival endpoint or competing risks |
coxed | Duration-Based Quantities of Interest for the Cox Proportional Hazards Model |
coxinterval | Cox-Type Models for Interval-Censored Data |
coxme | Mixed Effects Cox Models |
coxmeg | Cox Mixed-Effects Models for Genome-Wide Association Studies |
coxphf | Cox Regression with Firth's Penalized Likelihood |
CoxPhLb | Analyzing Right-Censored Length-Biased Data |
coxphMIC | Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion |
coxphSGD | Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model |
coxphw | Weighted Estimation in Cox Regression |
CoxPlus | Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects |
CoxR2 | R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model |
CoxRidge | Cox Models with Dynamic Ridge Penalties |
coxrobust | Robust Estimation in Cox Model |
coxrt | Cox Proportional Hazards Regression for Right-Truncated Data |
coxsei | Fitting a CoxSEI Model |
CP | Conditional Power Calculations |
cp4p | Calibration Plot for Proteomics |
cpa | Confirmatory Path Analysis through the d-sep tests |
CPAT | Change Point Analysis Tests |
CPBayes | Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations |
cpca | Methods to perform Common Principal Component Analysis (CPCA) |
cpcens | Changepoint Analysis using Censored Time Series Data |
cPCG | Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations |
cpd | Complex Pearson Distributions |
CPE | Concordance Probability Estimates in Survival Analysis |
CpGassoc | Association Between Methylation and a Phenotype of Interest |
CpGFilter | CpG Filtering Method Based on Intra-Class Correlation Coefficients |
cpk | Clinical Pharmacokinetics |
cplexAPI | R Interface to C API of IBM ILOG CPLEX |
cplm | Compound Poisson Linear Models |
cpm | Sequential and Batch Change Detection Using Parametric and Nonparametric Methods |
CPMCGLM | Correction of the P-Value after Multiple Coding in Generalized Linear Models |
CPP | Composition of Probabilistic Preferences (CPP) |
cpp11 | A C++11 Interface for R's C Interface |
cppRouting | Fast Implementation of Dijkstra Algorithm |
cpr | Control Polygon Reduction |
Cprob | The Conditional Probability Function of a Competing Event |
cprobit | Conditional Probit Model for Analysing Continuous Outcomes |
cprr | Functions for Working with Danish CPR Numbers |
CPsurv | Nonparametric Change Point Estimation for Survival Data |
cpsurvsim | Simulating Survival Data from Change-Point Hazard Distributions |
cpt | Classification Permutation Test |
cptcity | 'cpt-city' Colour Gradients |
cptec | An Interface to the 'CPTEC/INPE' API |
cqcr | Access 'Care Quality Commission' Data |
cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |
cquad | Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data |
CR | Power Calculation for Weighted Log-Rank Tests in Cure Rate Models |
CRAC | Cosmology R Analysis Code |
cramer | Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem |
crandep | Network Analysis of Dependencies of CRAN Packages |
crank | Completing Ranks |
cranlike | Tools for 'CRAN'-Like Repositories |
cranlogs | Download Logs from the 'RStudio' 'CRAN' Mirror |
cranly | Package Directives and Collaboration Networks in CRAN |
CRANsearcher | RStudio Addin for Searching Packages in CRAN Database Based on Keywords |
crantastic | Various R tools for http://crantastic.org/ |
crassmat | Conditional Random Sampling Sparse Matrices |
crawl | Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data |
crayon | Colored Terminal Output |
crblocks | Categorical Randomized Block Data Analysis |
crch | Censored Regression with Conditional Heteroscedasticity |
CREAM | Clustering of Genomic Regions Analysis Method |
credentials | Tools for Managing SSH and Git Credentials |
CreditMetrics | Functions for calculating the CreditMetrics risk model |
creditmodel | Toolkit for Credit Modeling, Analysis and Visualization |
CreditRisk | Evaluation of Credit Risk with Structural and Reduced Form Models |
credsubs | Credible Subsets |
credule | Credit Default Swap Functions |
cregg | Simple Conjoint Tidying, Analysis, and Visualization |
cRegulome | Obtain and Visualize Regulome-Gene Expression Correlations in Cancer |
CRF | Conditional Random Fields |
crfsuite | Conditional Random Fields for Labelling Sequential Data in Natural Language Processing |
cricketr | Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru |
crimCV | Group-Based Modelling of Longitudinal Data |
crimedata | Access Crime Data from the Open Crime Database |
crimelinkage | Statistical Methods for Crime Series Linkage |
crisp | Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way |
crispRdesignR | Guide Sequence Design for CRISPR/Cas9 |
CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |
crminer | Fetch 'Scholary' Full Text from 'Crossref' |
crmn | CCMN and Other Normalization Methods for Metabolomics Data |
crmPack | Object-Oriented Implementation of CRM Designs |
crmReg | Cellwise Robust M-Regression and SPADIMO |
crn | Downloads and Builds datasets for Climate Reference Network |
crochet | Implementation Helper for '[' and '[<-' of Custom Matrix-Like Types |
cromwellDashboard | A Dashboard to Visualize Scientific Workflows in 'Cromwell' |
crone | Structural Crystallography in 1d |
cronR | Schedule R Scripts and Processes with the 'cron' Job Scheduler |
crop | Graphics Cropping Tool |
cropdatape | Open Data of Agricultural Production of Crops of Peru |
CropDetectR | Crop Row Detector |
CropScapeR | Access Cropland Data Layer Data via the 'CropScape' Web Service |
crossdes | Construction of Crossover Designs |
crossmatch | The Cross-match Test |
crossReg | Confidence intervals for crossover points of two simple regression lines |
crossrun | Joint Distribution of Number of Crossings and Longest Run |
CrossScreening | Cross-Screening in Observational Studies that Test Many Hypotheses |
crosstalk | Inter-Widget Interactivity for HTML Widgets |
CrossVA | Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms |
crossval | Generic Functions for Cross Validation |
CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |
crosswalkr | Rename and Encode Data Frames Using External Crosswalk Files |
crossword.r | Generating Crosswords from Word Lists |
crov | Constrained Regression Model for an Ordinal Response and Ordinal Predictors |
CRPClustering | Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy |
crplyr | A 'dplyr' Interface for Crunch |
crqa | Recurrence Quantification Analysis for Categorical and Continuous Time-Series |
crrp | Penalized Variable Selection in Competing Risks Regression |
crrSC | Competing risks regression for Stratified and Clustered data |
crrstep | Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model |
crs | Categorical Regression Splines |
crseEventStudy | A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies |
crskdiag | Diagnostics for Fine and Gray Model |
crsmeta | Extract Coordinate System Metadata |
crsnls | Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe' |
crso | Cancer Rule Set Optimization ('crso') |
crsra | Tidying and Analyzing 'Coursera' Research Export Data |
crtests | Classification and Regression Tests |
CRTgeeDR | Doubly Robust Inverse Probability Weighted Augmented GEE Estimator |
CRTSize | Sample Size Estimation Functions for Cluster Randomized Trials |
CRUF | Clinical Research Utilities Functions |
crul | HTTP Client |
crunch | Crunch.io Data Tools |
crunchy | Shiny Apps on Crunch |
cruts | Interface to Climatic Research Unit Time-Series Version 3.21 Data |
CRWRM | Changing the Reference Group without Re-Running the Model |
CrypticIBDcheck | Identifying Cryptic Relatedness in Genetic Association Studies |
CryptRndTest | Statistical Tests for Cryptographic Randomness |
cryst | Calculate the Relative Crystallinity of Starch by XRD and FTIR |
csa | A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration |
csabounds | Bounds on Distributional Treatment Effect Parameters |
csampling | Functions for Conditional Simulation in Regression-Scale Models |
CsChange | Testing for Change in C-Statistic |
CSclone | Bayesian Nonparametric Modeling in R |
cSEM | Composite-Based Structural Equation Modeling |
CSeqpat | Frequent Contiguous Sequential Pattern Mining of Text |
CSESA | CRISPR-Based Salmonella Enterica Serotype Analyzer |
CSFA | Connectivity Scores with Factor Analysis |
cshapes | The CShapes Dataset and Utilities |
CSMES | Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions |
csn | Closed Skew-Normal Distribution |
csodata | Download Data from the CSO 'StatBank' API |
csp | Correlates of State Policy Data Set in R |
cspec | Complete Discrete Fourier Transform (DFT) and Periodogram |
csrplus | Methods to Test Hypotheses on the Distribution of Spatial Point Processes |
csSAM | csSAM - cell-specific Significance Analysis of Microarrays |
cssTools | Cognitive Social Structure Tools |
cstab | Selection of Number of Clusters via Normalized Clustering Instability |
cstar | Substantive significance testing for regression estimates and marginal effects |
CSTools | Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales |
csv | Read and Write CSV Files with Selected Conventions |
csvread | Fast Specialized CSV File Loader |
csvy | Import and Export CSV Data with a YAML Metadata Header |
CTAShiny | Interactive Application for Working with Contingency Tables |
ctDNAtools | Analyze Circulating Tumor DNA Sequencing Data |
ctgt | Closed Testing with Globaltest for Pathway Analysis |
cthreshER | Continuous Threshold Expectile Regression |
ctl | Correlated Trait Locus Mapping |
CTM | A Text Mining Toolkit for Chinese Document |
ctmcd | Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data |
ctmcmove | Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains |
ctmle | Collaborative Targeted Maximum Likelihood Estimation |
ctmm | Continuous-Time Movement Modeling |
ctqr | Censored and Truncated Quantile Regression |
ctrdata | Retrieve and Analyze Clinical Trials in Public Registers |
ctrlGene | Assess the Stability of Candidate Housekeeping Genes |
ctsem | Continuous Time Structural Equation Modelling |
ctsemOMX | Continuous Time SEM - 'OpenMx' Based Functions |
CTShiny | Interactive Document for Working with Classification Tree Analysis |
CTT | Classical Test Theory Functions |
CTTinShiny | Shiny Interface for the CTT Package |
CTTShiny | Classical Test Theory via Shiny |
ctv | CRAN Task Views |
CUB | A Class of Mixture Models for Ordinal Data |
cubature | Adaptive Multivariate Integration over Hypercubes |
cubelyr | A Data Cube 'dplyr' Backend |
cubeview | View 3D Raster Cubes Interactively |
cubfits | Codon Usage Bias Fits |
cubing | Rubik's Cube Solving |
Cubist | Rule- And Instance-Based Regression Modeling |
CUFF | Charles's Utility Function using Formula |
cultevo | Tools, Measures and Statistical Tests for Cultural Evolution |
CUMP | Analyze Multivariate Phenotypes by Combining Univariate Results |
cumplyr | Extends ddply to allow calculation of cumulative quantities |
cumSeg | Change Point Detection in Genomic Sequences |
cumstats | Cumulative Descriptive Statistics |
cumulocityr | Client for the 'Cumulocity' API |
cuRe | Parametric Cure Model Estimation |
curl | A Modern and Flexible Web Client for R |
currentSurvival | Estimation of CCI and CLFS Functions |
curry | Partial Function Application with %<%, %-<%, and %><% |
curstatCI | Confidence Intervals for the Current Status Model |
curvecomp | Multiple Curve Comparisons Using Parametric Bootstrap |
curveDepth | Tukey Curve Depth and Distance in the Space of Curves |
curvHDR | Filtering of Flow Cytometry Samples |
cusp | Cusp-Catastrophe Model Fitting Using Maximum Likelihood |
CustomerScoringMetrics | Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers |
customizedTraining | Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models |
customLayout | Arrange Elements on the R's Drawing Area or Inside the PowerPoint's Slide |
customsteps | Customizable Higher-Order Recipe Step Functions |
CustosAscensor | Costs Allocation for the Installation of an Elevator |
cusum | Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance |
CUSUMdesign | Compute Decision Interval and Average Run Length for CUSUM Charts |
cutoff | Seek the Significant Cutoff Value |
cutoffR | CUTOFF: A Spatio-temporal Imputation Method |
cutpointr | Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks |
CutpointsOEHR | Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model |
cuttlefish.model | An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model |
cvar | Compute Expected Shortfall and Value at Risk for Continuous Distributions |
cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |
CVcalibration | Estimation of the Calibration Equation with Error-in Observations |
cvcqv | Coefficient of Variation (CV) with Confidence Intervals (CI) |
cvcrand | Efficient Design and Analysis of Cluster Randomized Trials |
CVD | Color Vision Deficiencies |
cvequality | Tests for the Equality of Coefficients of Variation from Multiple Groups |
cvGEE | Cross-Validated Predictions from GEE |
CVglasso | Lasso Penalized Precision Matrix Estimation |
cvmdisc | Cramer von Mises Tests for Discrete or Grouped Distributions |
cvmgof | Cramer-von Mises Goodness-of-Fit Tests |
cvms | Cross-Validation for Model Selection |
cvq2 | Calculate the predictive squared correlation coefficient |
CVR | Canonical Variate Regression |
CVST | Fast Cross-Validation via Sequential Testing |
CVThresh | Level-Dependent Cross-Validation Thresholding |
cvTools | Cross-validation tools for regression models |
CVTuningCov | Regularized Estimators of Covariance Matrices with CV Tuning |
cvxbiclustr | Convex Biclustering Algorithm |
cvxclustr | Splitting methods for convex clustering |
CVXR | Disciplined Convex Optimization |
cwbtools | Tools to Create, Modify and Manage 'CWB' Corpora |
cwhmisc | Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools |
cwm | Cluster Weighted Models by EM algorithm |
cxhull | Convex Hull |
cxxfunplus | extend cxxfunction by saving the dynamic shared objects |
cyanoFilter | Cyanobacteria Population Identification for Flow Cytometry |
cycleRtools | Tools for Cycling Data Analysis |
cyclestreets | Cycle Routing and Data for Cycling Advocacy |
cyclocomp | Cyclomatic Complexity of R Code |
cycloids | cycloids |
Cyclops | Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis |
cymruservices | Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services |
cyphid | Cycle and Phase Identification for mastication data |
cyphr | High Level Encryption Wrappers |
cystiSim | Agent-Based Model for Taenia_solium Transmission and Control |
CytobankAPI | Cytobank API Wrapper for R |
CytobankAPIstats | Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI' |
CytobankBridgeR | Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application |
cytoDiv | Cytometric diversity indices |
cytofan | Plot Fan Plots for Cytometry Data using 'ggplot2' |
cytometree | Automated Cytometry Gating and Annotation |
cytominer | Methods for Image-Based Cell Profiling |
czechrates | Czech Interest Rates |
czso | Use Open Data from the Czech Statistical Office in R |
D3GB | Interactive Genome Browser with R |
d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |
D3partitionR | Interactive Charts of Nested and Hierarchical Data with 'D3.js' |
d3plus | Seamless 'D3Plus' Integration |
d3r | 'd3.js' Utilities for R |
d3Tree | Create Interactive Collapsible Trees with the JavaScript 'D3' Library |
DAAG | Data Analysis and Graphics Data and Functions |
DAAGbio | Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences |
daarem | Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms |
dabestr | Data Analysis using Bootstrap-Coupled Estimation |
DAC | Calculating Data Agreement Criterion Scores to Rank Experts Based on Their Beliefs |
DACF | Data Analysis with Ceiling and/or Floor Data |
dad | Three-Way / Multigroup Data Analysis Through Densities |
dae | Functions Useful in the Design and ANOVA of Experiments |
daewr | Design and Analysis of Experiments with R |
daff | Diff, Patch and Merge for Data.frames |
dafs | Data analysis for forensic scientists |
dagitty | Graphical Analysis of Structural Causal Models |
dagR | R functions for directed acyclic graphs |
DAIME | Effects of Changing Deposition Rates |
DAISIE | Dynamical Assembly of Islands by Speciation, Immigration and Extinction |
DAKS | Data Analysis and Knowledge Spaces |
DALEX | moDel Agnostic Language for Exploration and eXplanation |
DALEXtra | Extension for 'DALEX' Package |
dalmatian | Automating the Fitting of Double Linear Mixed Models in 'JAGS' |
DALY | The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R |
dam | Data Analysis Metabolomics |
DamiaNN | Neural Network Numerai |
DAMisc | Dave Armstrong's Miscellaneous Functions |
DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |
damr | Interface to Drosophila Activity Monitor System Result Files |
dams | Dams in the United States from the National Inventory of Dams (NID) |
DandEFA | Dandelion Plot for R-Mode Exploratory Factor Analysis |
dang | 'Dang' Associated New Goodies |
dani | Design and Analysis of Non-Inferiority Trials |
dann | Discriminant Adaptive Nearest Neighbor Classification |
danstat | R Client for the Statistics Denmark Databank API |
DAP | Discriminant Analysis via Projections |
dapr | 'purrr'-Like Apply Functions Over Input Elements |
daqapo | Data Quality Assessment for Process-Oriented Data |
Dark | The Analysis of Dark Adaptation Data |
DarkDiv | Estimating Dark Diversity and Site-Specific Species Pools |
darksky | Tools to Work with the 'Dark Sky' 'API' |
dartR | Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis |
darts | Statistical Tools to Analyze Your Darts Game |
dash | An Interface to the 'dash' Ecosystem for Authoring Reactive Web Applications |
dashboard | Interactive Data Visualization with D3.js |
dashboardthemes | Customise the Appearance of 'shinydashboard' Applications using Themes |
dashCoreComponents | Core Interactive UI Components for 'Dash' |
dashHtmlComponents | Vanilla HTML Components for 'Dash' |
dashTable | Core Interactive Table Component for 'dash' |
Dasst | Tools for Reading, Processing and Writing 'DSSAT' Files |
dat | Tools for Data Manipulation |
data.table | Extension of 'data.frame' |
data.tree | General Purpose Hierarchical Data Structure |
Data2LD | Functional Data Analysis with Linear Differential Equations |
data360r | Wrapper for 'TCdata360' and 'Govdata360' API |
DatabaseConnector | Connecting to Various Database Platforms |
DatabaseConnectorJars | JAR Dependencies for the 'DatabaseConnector' Package |
DatabionicSwarm | Swarm Intelligence for Self-Organized Clustering |
datacheck | Tools for Checking Data Consistency |
DataClean | Data Cleaning |
DataCombine | Tools for Easily Combining and Cleaning Data Sets |
dataCompareR | Compare Two Data Frames and Summarise the Difference |
datadigest | Create an Interactive Data Summary |
datadogr | R Client for 'Datadog' API |
DataEntry | Make it Easier to Enter Questionnaire Data |
DataExplorer | Automate Data Exploration and Treatment |
dataframeexplorer | Familiarity with Dataframes Before Data Manipulation |
dataframes2xls | Write Data Frames to Xls Files |
datafsm | Estimating Finite State Machine Models from Data |
datagovsgR | Calls Real Time APIs from Data Gov Singapore |
DataGraph | Export Data from R so 'DataGraph' can Read it |
DataLoader | Import Multiple File Types |
dataMaid | A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process |
datamap | A system for mapping foreign objects to R variables and environments |
datamaps | Create Interactive Web Maps with the 'JavaScript Datamaps' Library |
datamart | Unified access to your data sources |
dataMeta | Create and Append a Data Dictionary for an R Dataset |
datanugget | Create, Refine, and Cluster Data Nuggets |
dataonderivatives | Easily Source Publicly Available Data on Derivatives |
dataone | R Interface to the DataONE REST API |
datapack | A Flexible Container to Transport and Manipulate Data and Associated Resources |
datapackage.r | Data Package 'Frictionless Data' |
datapasta | R Tools for Data Copy-Pasta |
dataPreparation | Automated Data Preparation |
dataQualityR | Performs variable level data quality checks and generates summary statistics |
dataresqc | C3S Quality Control Tools for Historical Climate Data |
dataRetrieval | Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data |
datarium | Data Bank for Statistical Analysis and Visualization |
datarobot | 'DataRobot' Predictive Modeling API |
datasailr | Fast Row by Row Data Processing Tool, Using 'Sailr' Script |
datasauRus | Datasets from the Datasaurus Dozen |
dataseries | Switzerland's Data Series in One Place |
datasets.load | Interfaces for Loading Datasets |
datasetsICR | Datasets from the Book "An Introduction to Clustering with R" |
DataSpaceR | Interface to 'the CAVD DataSpace' |
DatAssim | Data Assimilation |
datastepr | An Implementation of a SAS-Style Data Step |
datastructures | Implementation of Core Data Structures |
datasus | An Interface to DATASUS System |
dataverse | Client for Dataverse 4 Repositories |
DataVisualizations | Visualizations of High-Dimensional Data |
DataViz | Data Visualisation Using an HTML Page and 'D3.js' |
date | Functions for Handling Dates |
daterangepicker | Create a Shiny Date-Range Input |
datetime | Nominal Dates, Times, and Durations |
datetimeutils | Utilities for Dates and Times |
datoramar | Interface to the 'Datorama' API |
datos | Traduce al Español Varios Conjuntos de Datos de Práctica |
datr | 'Dat' Protocol Interface |
datrProfile | Column Profile for Tables and Datasets |
dave | Functions for "Data Analysis in Vegetation Ecology" |
Davies | The Davies Quantile Function |
dawai | Discriminant Analysis with Additional Information |
daymetr | Interface to the 'Daymet' Web Services |
dbarts | Discrete Bayesian Additive Regression Trees Sampler |
dbEmpLikeGOF | Goodness-of-fit and two sample comparison tests using sample entropy |
dbEmpLikeNorm | Test for joint assessment of normality |
DBEST | Detecting Breakpoints and Estimating Segments in Trend |
DBfit | A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors |
dbflobr | Read and Write Files to SQLite Databases |
DBGSA | methods of distance-based gene set functional enrichment analysis |
DBI | R Database Interface |
DBItest | Testing 'DBI' 'Backends' |
dblcens | Compute the NPMLE of distribution from doubly censored data |
dBlockmodeling | Deterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks |
dblr | Discrete Boosting Logistic Regression |
dbmss | Distance-Based Measures of Spatial Structures |
dbnlearn | Dynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting |
dbnR | Dynamic Bayesian Network Learning and Inference |
dbparser | 'DrugBank' Database XML Parser |
dbplot | Simplifies Plotting Data Inside Databases |
dbplyr | A 'dplyr' Back End for Databases |
dbscan | Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
dbstats | Distance-Based Statistics |
dbx | A Fast, Easy-to-Use Database Interface |
dc3net | Inferring Condition-Specific Networks via Differential Network Inference |
DCA | Dynamic Correlation Analysis for High Dimensional Data |
DCCA | Detrended Fluctuation and Detrended Cross-Correlation Analysis |
DCchoice | Analyzing Dichotomous Choice Contingent Valuation Data |
dccvalidator | Metadata Validation for Data Coordinating Centers |
DCD | Differential Community Detection in Paired Biological Networks |
DCEM | Clustering Big Data using Expectation Maximization Star (EM*) Algorithm |
DCG | Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis |
DCGL | Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data |
dcGOR | Analysis of Ontologies and Protein Domain Annotations |
DChaos | Chaotic Time Series Analysis |
dChipIO | Methods for Reading dChip Files |
DCL | Claims Reserving under the Double Chain Ladder Model |
dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |
dclust | Divisive Hierarchical Clustering |
DCluster | Functions for the Detection of Spatial Clusters of Diseases |
DClusterm | Model-Based Detection of Disease Clusters |
dcminfo | Information Matrix for Diagnostic Classification Models |
dcmle | Hierarchical Models Made Easy with Data Cloning |
dcmodify | Modify Data Using Externally Defined Modification Rules |
DCODE | List Linear n-Peptide Constraints for Overlapping Protein Regions |
dcov | A Fast Implementation of Distance Covariance |
dCovTS | Distance Covariance and Correlation for Time Series Analysis |
DCPO | Dynamic Comparative Public Opinion |
dcurver | Utility Functions for Davidian Curves |
dcv | Conventional Cross-validation statistics for climate-growth model |
ddalpha | Depth-Based Classification and Calculation of Data Depth |
DDD | Diversity-Dependent Diversification |
dde | Solve Delay Differential Equations |
DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |
ddi | The Data Defect Index for Samples that May not be IID |
ddiv | Data Driven I-v Feature Extraction |
DDIwR | DDI with R |
DDM | Death Registration Coverage Estimation |
DDoutlier | Distance & Density-Based Outlier Detection |
ddp | Desirable Dietary Pattern |
ddpca | Diagonally Dominant Principal Component Analysis |
ddpcr | Analysis and Visualization of Droplet Digital PCR in R and on the Web |
DDPGPSurv | DDP-GP Survival Analysis |
DDPNA | Disease-Drived Differential Proteins Co-Expression Network Analysis |
DDRTree | Learning Principal Graphs with DDRTree |
ddsPLS | Data-Driven Sparse Partial Least Squares Robust to Missing Samples for Mono and Multi-Block Data Sets |
ddst | Data Driven Smooth Tests |
deadband | Statistical Deadband Algorithms Comparison |
deal | Learning Bayesian Networks with Mixed Variables |
DealGPL570 | Dealing GPL570 RAW.tar file |
deamer | Deconvolution density estimation with adaptive methods for a variable prone to measurement error |
deaR | Conventional and Fuzzy Data Envelopment Analysis |
debar | A Post-Clustering Denoiser for COI-5P Barcode Data |
deBInfer | Bayesian Inference for Differential Equations |
debugme | Debug R Packages |
debugr | Debug Tool to Watch Objects/Expressions While Running an R Script |
DeCAFS | Detecting Changes in Autocorrelated and Fluctuating Signals |
DECIDE | DEComposition of Indirect and Direct Effects |
decido | Bindings for 'Mapbox' Ear Cutting Triangulation Library |
decision | Statistical Decision Analysis |
DecisionAnalysis | Implementation of Multi Objective Decision Analysis |
decisionSupport | Quantitative Support of Decision Making under Uncertainty |
deckgl | An R Interface to 'deck.gl' |
DeclareDesign | Declare and Diagnose Research Designs |
decode | Differential Co-Expression and Differential Expression Analysis |
decoder | Decode Coded Variables to Plain Text and the Other Way Around |
decomposedPSF | Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD) |
DecomposeR | Empirical Mode Decomposition for Cyclostratigraphy |
decompr | Global-Value-Chain Decomposition |
decon | Deconvolution Estimation in Measurement Error Models |
deconstructSigs | Identifies Signatures Present in a Tumor Sample |
deconvolveR | Empirical Bayes Estimation Strategies |
decor | Retrieve Code Decorations |
DecorateR | Fit and Deploy DECORATE Trees |
Deducer | A Data Analysis GUI for R |
DeducerPlugInExample | Deducer Plug-in Example |
DeducerPlugInScaling | Reliability and factor analysis plugin |
DeducerSpatial | Deducer for spatial data analysis |
DeducerSurvival | Add Survival Dialogue to Deducer |
DeducerText | Deducer GUI for Text Data |
deducorrect | Deductive Correction, Deductive Imputation, and Deterministic Correction |
deductive | Data Correction and Imputation Using Deductive Methods |
deep | A Neural Networks Framework |
deepboost | Deep Boosting Ensemble Modeling |
deepdep | Visualise and Explore the Deep Dependencies of R Packages |
deepdive | Deep Learning for General Purpose |
deepgmm | Deep Gaussian Mixture Models |
deepnet | deep learning toolkit in R |
deepNN | Deep Learning |
DEEPR | Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test |
DEEVD | Density Estimation by Extreme Value Distributions |
default | Change the Default Arguments in R Functions |
define | Create FDA-Style Data and Program Definitions |
deflateBR | Deflate Nominal Brazilian Reais |
deformula | Integration of One-Dimensional Functions with Double Exponential Formulas |
deGradInfer | Parameter Inference for Systems of Differential Equation |
degreenet | Models for Skewed Count Distributions Relevant to Networks |
deisotoper | Detection of Isotope Pattern of a Mass Spectrometric Measurement |
Delaporte | Statistical Functions for the Delaporte Distribution |
delayed | A Framework for Parallelizing Dependent Tasks |
DelayedEffect.Design | Sample Size and Power Calculations using the APPLE and SEPPLE Methods |
deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |
DeLorean | Estimates Pseudotimes for Single Cell Expression Data |
delt | Estimation of Multivariate Densities Using Adaptive Partitions |
Delta | Measure of Agreement Between Two Raters |
deltaPlotR | Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method |
deltar | Calculation of Delta R Values |
DELTD | Kernel Density Estimation using Lifetime Distributions |
Demerelate | Functions to Calculate Relatedness on Diploid Genetic Data |
deming | Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |
DemoDecomp | Decompose Demographic Functions |
demogR | Analysis of Age-Structured Demographic Models |
DemografixeR | Extrapolate Gender, Age and Nationality of a Name |
demoGraphic | Providing Demographic Table with the P-Value, Standardized Mean Difference Value |
demography | Forecasting Mortality, Fertility, Migration and Population Data |
demoKde | Kernel Density Estimation for Demonstration Purposes |
demoShiny | Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps |
DEMOVA | DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set |
demu | Optimal Design Emulators via Point Processes |
dendextend | Extending 'dendrogram' Functionality in R |
dendRoAnalyst | A Tool for Processing and Analyzing Dendrometer Data |
dendroextras | Extra Functions to Cut, Label and Colour Dendrogram Clusters |
dendrometeR | Analyzing Dendrometer Data |
DendroSync | A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies |
dendroTools | Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data |
DendSer | Dendrogram seriation: ordering for visualisation |
dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |
DengueRT | Parameter Estimates and Real-Time Prediction of a Single Dengue Outbreak |
denoiSeq | Differential Expression Analysis Using a Bottom-Up Model |
denoiseR | Regularized Low Rank Matrix Estimation |
denovolyzeR | Statistical Analyses of De Novo Genetic Variants |
denpro | Visualization of Multivariate Functions, Sets, and Data |
denseFLMM | Functional Linear Mixed Models for Densely Sampled Data |
densitr | Analysing Density Profiles from Resistance Drilling of Trees |
Density.T.HoldOut | Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation |
densityClust | Clustering by Fast Search and Find of Density Peaks |
DensParcorr | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks |
densratio | Density Ratio Estimation |
denstrip | Density Strips and Other Methods for Compactly Illustrating Distributions |
denvax | Simple Dengue Test and Vaccinate Cost Thresholds |
DEoptim | Global Optimization by Differential Evolution |
DEoptimR | Differential Evolution Optimization in Pure R |
depcoeff | Dependency Coefficients |
depend.truncation | Statistical Methods for the Analysis of Dependently Truncated Data |
depigner | A Utility Package to Help you Deal with "Pignas" |
DepLogo | Dependency Logo |
DEploid | Deconvolute Mixed Genomes with Unknown Proportions |
depmix | Dependent Mixture Models |
depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
depth | Nonparametric Depth Functions for Multivariate Analysis |
depth.plot | Multivariate Analogy of Quantiles |
DepthProc | Statistical Depth Functions for Multivariate Analysis |
depthTools | Depth Tools Package |
dequer | Stacks, Queues, and 'Deques' for R |
DeRezende.Ferreira | Zero Coupon Yield Curve Modelling |
Deriv | Symbolic Differentiation |
derivmkts | Functions and R Code to Accompany Derivatives Markets |
DES | Discrete Event Simulation |
desc | Manipulate DESCRIPTION Files |
descomponer | Seasonal Adjustment by Frequency Analysis |
descr | Descriptive Statistics |
describedata | Miscellaneous Descriptive Functions |
DescribeDisplay | An Interface to the 'DescribeDisplay' 'GGobi' Plugin |
describer | Describe Data in R Using Common Descriptive Statistics |
DescriptiveStats.OBeu | Descriptive Statistics 'OpenBudgets.eu' |
descriptr | Generate Descriptive Statistics |
descstatsr | Descriptive Univariate Statistics |
desctable | Produce Descriptive and Comparative Tables Easily |
DescTools | Tools for Descriptive Statistics |
DescToolsAddIns | Interactive Functions to be Used as Shortcuts in 'RStudio' |
deseasonalize | Optimal deseasonalization for geophysical time series using AR fitting |
designGG | Computational tool for designing genetical genomics experiments |
DesignLibrary | Library of Research Designs |
designmatch | Matched Samples that are Balanced and Representative by Design |
designr | Balanced Factorial Designs |
desiR | Desirability Functions for Ranking, Selecting, and Integrating Data |
desirability | Function Optimization and Ranking via Desirability Functions |
desire | Desirability functions in R |
DESnowball | Bagging with Distance-based Regression for Differential Gene Expression Analyses |
deSolve | Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
desplot | Plotting Field Plans for Agricultural Experiments |
DET | Representation of DET Curve with Confidence Intervals |
details | Create Details HTML Tag for Markdown and Package Documentation |
detect | Analyzing Wildlife Data with Detection Error |
detector | Detect Data Containing Personally Identifiable Information |
detectRUNS | Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes |
detectseparation | Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
deTestSet | Test Set for Differential Equations |
DetLifeInsurance | Life Insurance Premium and Reserves Valuation |
DetMCD | Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |
detpack | Density Estimation and Random Number Generation with Distribution Element Trees |
DetR | Suite of Deterministic and Robust Algorithms for Linear Regression |
detrendeR | Start the detrendeR Graphical User Interface (GUI) |
detrendr | Detrend Images |
deTS | Tissue-Specific Enrichment Analysis |
DetSel | A Computer Program to Detect Markers Responding to Selection |
detzrcr | Compare Detrital Zircon Suites |
devEMF | EMF Graphics Output Device |
devFunc | Clear and Condense Argument Check for User-Defined Functions |
devoid | A Graphic Device that Does Nothing |
Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |
devRate | Quantify the Relationship Between Development Rate and Temperature in Ectotherms |
devtools | Tools to Make Developing R Packages Easier |
DevTreatRules | Develop Treatment Rules with Observational Data |
dexter | Data Management and Analysis of Tests |
dextergui | A Graphical User Interface for Dexter |
dexterMST | CML and Bayesian Calibration of Multistage Tests |
DFA | Detrended Fluctuation Analysis |
DFA.CANCOR | Linear Discriminant Function and Canonical Correlation Analysis |
dfadjust | Degrees of Freedom Adjustment for Robust Standard Errors |
dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |
dfCompare | Compare Two Dataframes and Return Adds, Changes, and Deletes |
dfConn | Dynamic Functional Connectivity Analysis |
dfcrm | Dose-Finding by the Continual Reassessment Method |
dfexplore | Explore data.frames by plotting NA and classes of each variable |
dfidx | Indexed Data Frames |
DFIT | Differential Functioning of Items and Tests |
dfmeta | Meta-Analysis of Phase I Dose-Finding Early Clinical Trials |
dfmta | Phase I/II Adaptive Dose-Finding Design for MTA |
dfoliatR | Detection and Analysis of Insect Defoliation Signals in Tree Rings |
dfoptim | Derivative-Free Optimization |
Dforest | Decision Forest |
dformula | Data Manipulation using Formula |
dfped | Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies |
dfphase1 | Phase I Control Charts (with Emphasis on Distribution-Free Methods) |
dfpk | Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials |
dfvad | Diewert and Fox's Method of Value Added Growth Decomposition |
dga | Capture-Recapture Estimation using Bayesian Model Averaging |
dGAselID | Genetic Algorithm with Incomplete Dominance for Feature Selection |
DGCA | Differential Gene Correlation Analysis |
dggridR | Discrete Global Grids |
dglars | Differential Geometric Least Angle Regression |
dglm | Double Generalized Linear Models |
DGLMExtPois | Double Generalized Linear Models Extending Poisson Regression |
DGM | Dynamic Graphical Models |
dgmb | Simulating Data for PLS Mode B Structural Models |
dgodata | Data for the 'dgo' Package |
dgof | Discrete Goodness-of-Fit Tests |
dgumbel | The Gumbel Distribution Functions and Gradients |
DGVM3D | 3D Forest Simulation Visualization Tool |
DHARMa | Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
DHBins | Hexmaps for NZ District Health Boards |
dhga | Differential Hub Gene Analysis |
dhglm | Double Hierarchical Generalized Linear Models |
dhh | A Heavy-Headed Distribution |
dhReg | Dynamic Harmonic Regression |
DHS.rates | Calculates Demographic Indicators |
dHSIC | Independence Testing via Hilbert Schmidt Independence Criterion |
di | Deficit Index (DI) |
diagis | Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling |
diagmeta | Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints |
diagonals | Block Diagonal Extraction or Replacement |
diagram | Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
DiagrammeR | Graph/Network Visualization |
DiagrammeRsvg | Export DiagrammeR Graphviz Graphs as SVG |
DiallelAnalysisR | Diallel Analysis with R |
dialr | Parse, Format, and Validate International Phone Numbers |
dialrjars | Required 'libphonenumber' jars for the 'dialr' Package |
dials | Tools for Creating Tuning Parameter Values |
diaplt | Beads Summary Plot of Ranges |
dice | Calculate probabilities of various dice-rolling events |
DiceDesign | Designs of Computer Experiments |
DiceEval | Construction and Evaluation of Metamodels |
DiceKriging | Kriging Methods for Computer Experiments |
DiceOptim | Kriging-Based Optimization for Computer Experiments |
diceR | Diverse Cluster Ensemble in R |
DiceView | Methods for Visualization of Computer Experiments Design and Surrogate |
dichromat | Color Schemes for Dichromats |
dicionariosIBGE | Dictionaries for reading microdata surveys from IBGE |
DIconvex | Finding Patterns of Monotonicity and Convexity in Data |
Dict | R6 Based Key-Value Dictionary Implementation |
did | Treatment Effects with Multiple Periods and Groups |
DidacticBoost | A Simple Implementation and Demonstration of Gradient Boosting |
Diderot | Bibliographic Network Analysis |
didrooRFM | Compute Recency Frequency Monetary Scores for your Customer Data |
dief | Metrics for Continuous Efficiency |
dielectric | Defines some physical constants and dielectric functions commonly used in optics, plasmonics |
dietr | Diet Estimated Trophic Levels |
diezeit | R Interface to the ZEIT ONLINE Content API |
DIFboost | Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques |
difconet | Differential Coexpressed Networks |
DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |
diffdepprop | Calculates Confidence Intervals for two Dependent Proportions |
diffdf | Dataframe Difference Tool |
diffee | Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure |
diffEnrich | Given a List of Gene Symbols, Performs Differential Enrichment Analysis |
diffeqr | Solving Differential Equations (ODEs, SDEs, DDEs, DAEs) |
diffeR | Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables |
diffIRT | Diffusion IRT Models for Response and Response Time Data |
diffman | Detect Differentiation Problems |
diffMeshGP | Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model |
DiffNet | Detection of Statistically Significant Changes in Complex Biological Networks |
diffobj | Diffs for R Objects |
diffpriv | Easy Differential Privacy |
diffr | Display Differences Between Two Files using Codediff Library |
diffrprojects | Projects for Text Version Comparison and Analytics in R |
diffrprojectswidget | Visualization for 'diffrprojects' |
diffusion | Forecast the Diffusion of New Products |
diffusionMap | Diffusion Map |
DiffusionRgqd | Inference and Analysis for Generalized Quadratic Diffusions |
DiffusionRimp | Inference and Analysis for Diffusion Processes via Data Imputation and Method of Lines |
DiffusionRjgqd | Inference and Analysis for Jump Generalized Quadratic Diffusions |
diffusr | Network Diffusion Algorithms |
DiffXTables | Pattern Heterogeneity via Distributional Differences Across Contingency Tables |
DIFlasso | A Penalty Approach to Differential Item Functioning in Rasch Models |
difNLR | DIF and DDF Detection by Non-Linear Regression Models |
DIFplus | Multilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection |
difR | Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF) |
DIFtree | Item Focussed Trees for the Identification of Items in Differential Item Functioning |
digest | Create Compact Hash Digests of R Objects |
digitalPCR | Estimate Copy Number for Digital PCR |
digitize | Use Data from Published Plots in R |
dils | Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links |
DIME | DIME (Differential Identification using Mixture Ensemble) |
dimensionsR | Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API |
DIMORA | Diffusion Models R Analysis |
dimRed | A Framework for Dimensionality Reduction |
dina | Bayesian Estimation of DINA Model |
dinamic | DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors |
dineq | Decomposition of (Income) Inequality |
dint | A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates |
DiPALM | Differential Pattern Analysis via Linear Modeling |
DiPhiSeq | Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data |
DiPs | Directional Penalties for Optimal Matching in Observational Studies |
dipsaus | A Dipping Sauce for Data Analysis and Visualizations |
diptest | Hartigan's Dip Test Statistic for Unimodality - Corrected |
DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |
DirectedClustering | Directed Weighted Clustering Coefficient |
DirectEffects | Estimating Controlled Direct Effects for Explaining Causal Findings |
Directional | Directional Statistics |
directlabels | Direct Labels for Multicolor Plots |
directotree | Creates an Interactive Tree Structure of a Directory |
directPA | Direction Analysis for Pathways and Kinases |
DirectStandardisation | Adjusted Means and Proportions by Direct Standardisation |
dirichletprocess | Build Dirichlet Process Objects for Bayesian Modelling |
DirichletReg | Dirichlet Regression in R |
dirmcmc | Directional Metropolis Hastings Algorithm |
dirmult | Estimation in Dirichlet-Multinomial distribution |
disaggregation | Disaggregation Modelling |
discfrail | Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties |
discgolf | Discourse API Client |
discharge | Fourier Analysis of Discharge Data |
disclap | Discrete Laplace Exponential Family |
disclapmix | Discrete Laplace Mixture Inference using the EM Algorithm |
discnorm | Test for Discretized Normality in Ordinal Data |
disco | Discordance and Concordance of Transcriptomic Responses |
discord | Functions for Discordant Kinship Modeling |
discourseGT | Analyze Group Patterns using Graph Theory in Educational Settings |
discoveR | Exploratory Data Analysis System |
discretecdAlgorithm | Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks |
DiscreteFDR | Multiple Testing Procedures with Adaptation for Discrete Tests |
DiscreteInverseWeibull | Discrete Inverse Weibull Distribution |
DiscreteLaplace | Discrete Laplace Distributions |
discreteMTP | Multiple testing procedures for discrete test statistics |
DiscreteQvalue | Improved q-Values for Discrete Uniform and Homogeneous Tests |
discreteRV | Create and Manipulate Discrete Random Variables |
DiscreteWeibull | Discrete Weibull Distributions (Type 1 and 3) |
discretization | Data preprocessing, discretization for classification |
discrim | Model Wrappers for Discriminant Analysis |
DiscriMiner | Tools of the Trade for Discriminant Analysis |
discSurv | Discrete Time Survival Analysis |
diseasemapping | Modelling Spatial Variation in Disease Risk for Areal Data |
Disequilibrium | Disequilibrium Models |
DisHet | Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples |
DisimForMixed | Calculate Dissimilarity Matrix for Dataset with Mixed Attributes |
DisImpact | Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups |
disk.frame | Larger-than-RAM Disk-Based Data Manipulation Framework |
diskImageR | A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays |
dismo | Species Distribution Modeling |
disparityfilter | Disparity Filter Algorithm for Weighted Networks |
displayHTS | displayHTS |
dispmod | Modelling Dispersion in GLM |
disposables | Create Disposable R Packages for Testing |
dispRity | Measuring Disparity |
dissever | Spatial Downscaling using the Dissever Algorithm |
DiSSMod | Fitting Sample Selection Models for Discrete Response Variables |
dissUtils | Utilities for making pairwise comparisons of multivariate data |
Distance | Distance Sampling Detection Function and Abundance Estimation |
distance.sample.size | Calculates Study Size Required for Distance Sampling |
distances | Tools for Distance Metrics |
distantia | Assessing Dissimilarity Between Multivariate Time Series |
DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |
distcomp | Computations over Distributed Data without Aggregation |
distcrete | Discrete Distribution Approximations |
distdichoR | Distributional Method for the Dichotomisation of Continuous Outcomes |
distdrawr | Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database |
distfree.cr | Distribution-Free Confidence Region |
distill | 'R Markdown' Format for Scientific and Technical Writing |
distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |
disto | Unified Interface to Distance, Dissimilarity, Similarity Matrices |
distory | Distance Between Phylogenetic Histories |
distr | Object Oriented Implementation of Distributions |
distr6 | The Complete R6 Probability Distributions Interface |
distrDoc | Documentation for 'distr' Family of R Packages |
distreg.vis | Framework for the Visualization of Distributional Regression Models |
distrEllipse | S4 Classes for Elliptically Contoured Distributions |
distrEx | Extensions of Package 'distr' |
DISTRIB | Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach |
Distributacalcul | Probability Distribution Functions |
distributional | Vectorised Probability Distributions |
DistributionFitR | Fitting Multiple Parametric Distributions |
DistributionOptimization | Distribution Optimization |
distributions3 | Probability Distributions as S3 Objects |
distributionsrd | Distribution Fitting and Evaluation |
DistributionTest | Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio |
DistributionUtils | Distribution Utilities |
distrMod | Object Oriented Implementation of Probability Models |
distrom | Distributed Multinomial Regression |
distrr | Estimate and Manage Empirical Distributions |
distrRmetrics | Distribution Classes for Distributions from Rmetrics |
distrSim | Simulation Classes Based on Package 'distr' |
distrTeach | Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School |
distrTEst | Estimation and Testing Classes Based on Package 'distr' |
distTails | A Collection of Full Defined Distribution Tails |
disttools | Distance Object Manipulation Tools |
dittodb | A Test Environment for Database Requests |
divagis | Provides tools for quality checks of georeferenced plant species accessions |
divDyn | Diversity Dynamics using Fossil Sampling Data |
DivE | Diversity Estimator |
diveMove | Dive Analysis and Calibration |
diverge | Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages |
diverse | Diversity Measures for Complex Systems |
diversitree | Comparative 'Phylogenetic' Analyses of Diversification |
diveRsity | A Comprehensive, General Purpose Population Genetics Analysis Package |
diversityForest | Diversity Forests |
DiversityOccupancy | Building Diversity Models from Multiple Species Occupancy Models |
divest | Get Images Out of DICOM Format Quickly |
DivMelt | HRM Diversity Assay Analysis Tool |
divo | Tools for Analysis of Diversity and Similarity in Biological Systems |
dixon | Nearest Neighbour Contingency Table Analysis |
dixonTest | Dixon's Ratio Test for Outlier Detection |
diyar | Multistage Record Linkage and Case Definition for Epidemiological Analysis |
DIZutils | Utilities for 'DIZ' R Package Development |
DJL | Distance Measure Based Judgment and Learning |
dkanr | Client for the 'DKAN' API |
dkDNA | Diffusion Kernels on a Set of Genotypes |
dLagM | Time Series Regression Models with Distributed Lag Models |
DLASSO | Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models |
dlbayes | Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection |
dlib | Allow Access to the 'Dlib' C++ Library |
dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |
dlmap | Detection Localization Mapping for QTL |
DLMtool | Data-Limited Methods Toolkit |
dlnm | Distributed Lag Non-Linear Models |
dlookr | Tools for Data Diagnosis, Exploration, Transformation |
dlsem | Distributed-Lag Linear Structural Equation Models |
dlstats | Download Stats of R Packages |
dm | Relational Data Models |
dma | Dynamic Model Averaging |
dmacs | Measurement Nonequivalence Effect Size Calculator |
dmai | Divisia Monetary Aggregates Index |
dmbc | Model Based Clustering of Binary Dissimilarity Measurements |
DMCfun | Diffusion Model of Conflict (DMC) in Reaction Time Tasks |
dmdScheme | Domain Specific MetaData Scheme |
dml | Distance Metric Learning in R |
dmm | Dyadic Mixed Model for Pedigree Data |
DMMF | Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model |
dMod | Dynamic Modeling and Parameter Estimation in ODE Models |
DMRMark | DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data |
DMRnet | Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data |
dmt | Dependency Modeling Toolkit |
dmtools | Tools for Validation the Dataset |
dmutate | Mutate Data Frames with Random Variates |
DMwR | Functions and data for "Data Mining with R" |
DMwR2 | Functions and Data for the Second Edition of "Data Mining with R" |
dna | Differential Network Analysis |
dnapath | Differential Network Analysis using Gene Pathways |
DNAseqtest | Generating and Testing DNA Sequences |
DNAtools | Tools for Analysing Forensic Genetic DNA Data |
DnE | Distribution and Equation |
dnet | Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |
dng | Distributions and Gradients |
DNLC | Differential Network Local Consistency Analysis |
DNMF | Discriminant Non-Negative Matrix Factorization |
dnr | Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family |
do | Data Operator |
DOBAD | Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains |
dobin | Dimension Reduction for Outlier Detection |
dobson | Data from the GLM Book by Dobson and Barnett |
doBy | Groupwise Statistics, LSmeans, Linear Contrasts, Utilities |
doc2concrete | Measuring Concreteness in Natural Language |
docdescriptR | Automatic Reporter for Descriptive Analysis |
docinfeR | Automatic Reporter for Inference Analysis |
dockerfiler | Easy Dockerfile Creation from R |
docknitr | Use Docker Images to Process Rmarkdown Blocks |
docopt | Command-Line Interface Specification Language |
docopulae | Optimal Designs for Copula Models |
docstring | Provides Docstring Capabilities to R Functions |
documair | Automatic Documentation for R packages |
document | Run 'roxygen2' on (Chunks of) Single Code Files |
documenter | Documents Files |
docuSignr | Connect to 'DocuSign' API |
docxtools | Tools for R Markdown to Docx Documents |
docxtractr | Extract Data Tables and Comments from 'Microsoft' 'Word' Documents |
Dodge | Acceptance Sampling Ideas Originated by H.F. Dodge |
dodgr | Distances on Directed Graphs |
DODR | Detection of Differential Rhythmicity |
DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
DoE.MIParray | Creation of Arrays by Mixed Integer Programming |
DoE.multi.response | Construct Multi-Response Experimental Designs |
DoE.wrapper | Wrapper Package for Design of Experiments Functionality |
doebioresearch | Analysis of Design of Experiments for Biological Research |
DoEstRare | Rare Variant Association Test Based on Position Density Estimation |
doex | The One-Way Heteroscedastic ANOVA Tests |
doFuture | A Universal Foreach Parallel Adapter using the Future API of the 'future' Package |
doMC | Foreach Parallel Adaptor for 'parallel' |
Dominance | A Package to Calculate and Visualize Dominance Hierarchies |
dominanceanalysis | Dominance Analysis |
domino | R Console Bindings for the 'Domino Command-Line Client' |
doMPI | Foreach Parallel Adaptor for the Rmpi Package |
donut | Nearest Neighbour Search with Variables on a Torus |
doParallel | Foreach Parallel Adaptor for the 'parallel' Package |
doRedis | 'Foreach' Parallel Adapter Using the 'Redis' Database |
doremi | Dynamics of Return to Equilibrium During Multiple Inputs |
doRNG | Generic Reproducible Parallel Backend for 'foreach' Loops |
DOS | Design of Observational Studies |
DOS2 | Design of Observational Studies, Companion to the Second Edition |
dosearch | Causal Effect Identification from Multiple Incomplete Data Sources |
dosedesignR | Interactive Designing of Dose Finding Studies |
DoseFinding | Planning and Analyzing Dose Finding Experiments |
doSNOW | Foreach Parallel Adaptor for the 'snow' Package |
dosresmeta | Multivariate Dose-Response Meta-Analysis |
dostats | Compute Statistics Helper Functions |
DOT | Render and Export DOT Graphs in R |
DoTC | Distribution of Typicality Coefficients |
dotCall64 | Enhanced Foreign Function Interface Supporting Long Vectors |
dotdot | Enhanced Assignment Operator to Overwrite or Grow Objects |
dotenv | Load Environment Variables from '.env' |
dotwhisker | Dot-and-Whisker Plots of Regression Results |
doubcens | Survivor Function Estimation for Doubly Interval-Censored Failure Time Data |
double.truncation | Analysis of Doubly-Truncated Data |
DoubleCone | Test Against Parametric Regression Function |
DoubleExpSeq | Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter |
doubt | Enable Operators Containing the '?' Symbol |
DOvalidation | Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation |
Dowd | Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk |
downloader | Download Files over HTTP and HTTPS |
downloadthis | Implement Download Buttons in 'rmarkdown' |
downscaledl | Downscale of RS Images using Deep Learning |
downsize | A Tool to Downsize Large Workflows for Testing |
dpa | Dynamic Path Approach |
dparser | Port of 'Dparser' Package |
DPBBM | Dirichlet Process Beta-Binomial Mixture |
dpcid | Differential Partial Correlation IDentification |
Dpit | Distribution Pitting |
dplR | Dendrochronology Program Library in R |
dplRCon | Concordance for Dendroclimatology |
dplyr | A Grammar of Data Manipulation |
dplyr.teradata | A 'Teradata' Backend for 'dplyr' |
dplyrAssist | RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr' |
dpmr | Data Package Manager for R |
DPP | Inference of Parameters of Normal Distributions from a Mixture of Normals |
dppmix | Determinantal Point Process Mixture Models |
DPQ | Density, Probability, Quantile ('DPQ') Computations |
dprint | Print Tabular Data to Graphics Device |
DPtree | Dirichlet-Based Polya Tree |
DPWeibull | Dirichlet Process Weibull Mixture Model for Survival Data |
dqrng | Fast Pseudo Random Number Generators |
dr | Methods for Dimension Reduction for Regression |
dr4pl | Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model |
dracor | Decode Draco Format 3D Mesh Data |
dragon | Deep Time Redox Analysis of the Geobiology Ontology Network |
dragonking | Statistical Tools to Identify Dragon Kings |
dragulaR | Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library' |
drake | A Pipeline Toolkit for Reproducible Computation at Scale |
drat | 'Drat' R Archive Template |
draw | Wrapper Functions for Producing Graphics |
DRaWR | Discriminative Random Walk with Restart |
DRAYL | Computation of Rayleigh Densities of Arbitrary Dimension |
DrBats | Data Representation: Bayesian Approach That's Sparse |
drc | Analysis of Dose-Response Curves |
DRDID | Doubly Robust Difference-in-Differences Estimators |
dreamerr | Error Handling Made Easy |
DREGAR | Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR) |
drf | Distributional Random Forests |
drfit | Dose-Response Data Evaluation |
drgee | Doubly Robust Generalized Estimating Equations |
DRHotNet | Differential Risk Hotspots in a Linear Network |
DriftBurstHypothesis | Calculates the Test-Statistic for the Drift Burst Hypothesis |
drifter | Concept Drift and Concept Shift Detection for Predictive Models |
DrillR | R Driver for Apache Drill |
DrImpute | Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
DrInsight | Drug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data |
DRIP | Discontinuous Regression and Image Processing |
DriveML | Self-Drive Machine Learning Projects |
drmdel | Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples |
DRomics | Dose Response for Omics |
dropR | Analyze Drop Out of an Experiment or Survey |
droptest | Simulates LOX Drop Testing |
DRR | Dimensionality Reduction via Regression |
drtmle | Doubly-Robust Nonparametric Estimation and Inference |
DrugClust | Implementation of a Machine Learning Framework for Predicting Drugs Side Effects |
drugCombo | Drug Interaction Modeling Based on Loewe Additivity Following Harbron's Approach |
drumr | Turn R into a Drum Machine |
ds | Descriptive Statistics |
ds4psy | Data Science for Psychologists |
dsa | Seasonal Adjustment of Daily Time Series |
DSAIDE | Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) |
DSAIRM | Dynamical Systems Approach to Immune Response Modeling |
dsample | Discretization-Based Direct Random Sample Generation |
DSBayes | Bayesian subgroup analysis in clinical trials |
dscore | D-Score for Child Development |
dse | Dynamic Systems Estimation (Time Series Package) |
DSI | 'DataSHIELD' Interface |
DSL | Distributed Storage and List |
dslabs | Data Science Labs |
dslice | Dynamic Slicing |
DSLite | 'DataSHIELD' Implementation on Local Datasets |
dsm | Density Surface Modelling of Distance Sampling Data |
DSOpal | 'DataSHIELD' Implementation for 'Opal' |
DSpat | Spatial Modelling for Distance Sampling Data |
DSpoty | Get 'Spotify' API Multiple Information |
dsr | Compute Directly Standardized Rates, Ratios and Differences |
dsrTest | Tests and Confidence Intervals on Directly Standardized Rates for Several Methods |
DSSAT | A Comprehensive R Interface for the DSSAT Cropping Systems Model |
dssd | Distance Sampling Survey Design |
DSsim | Distance Sampling Simulations |
dst | Using the Theory of Belief Functions |
dstack | Publishing Interactive Plots |
DstarM | Analyze Two Choice Reaction Time Data with the D*M Method |
dstat | Conditional Sensitivity Analysis for Matched Observational Studies |
DStree | Recursive Partitioning for Discrete-Time Survival Trees |
dSVA | Direct Surrogate Variable Analysis |
DSviaDRM | Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms |
DT | A Wrapper of the JavaScript Library 'DataTables' |
dtangle | Cell Type Deconvolution from Gene Expressions |
DTAT | Dose Titration Algorithm Tuning |
DTAXG | Diagnostic Test Assessment in the Absence of Gold Standard |
DTComPair | Comparison of Binary Diagnostic Tests in a Paired Study Design |
DtD | Distance to Default |
DTDA | Doubly Truncated Data Analysis |
DTDA.cif | Doubly Truncated Data Analysis, Cumulative Incidence Functions |
DTDA.ni | Doubly Truncated Data Analysis, Non Iterative |
dti | Analysis of Diffusion Weighted Imaging (DWI) Data |
DTK | Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes |
DTMCPack | Suite of functions related to discrete-time discrete-state Markov Chains |
dtp | Dynamic Panel Threshold Model |
dtpcrm | Dose Transition Pathways for Continual Reassessment Method |
dtplyr | Data Table Back-End for 'dplyr' |
DTR | Estimation and Comparison of Dynamic Treatment Regimes |
dtree | Decision Trees |
DTRlearn2 | Statistical Learning Methods for Optimizing Dynamic Treatment Regimes |
DTRreg | DTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv) |
DTSg | A Class for Working with Time Series Based on 'data.table' and 'R6' with Largely Optional Reference Semantics |
dtt | Discrete Trigonometric Transforms |
dttr2 | Manipulate Date, POSIXct and hms Vectors |
dtw | Dynamic Time Warping Algorithms |
DTWBI | Imputation of Time Series Based on Dynamic Time Warping |
dtwclust | Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance |
dtwSat | Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis |
DTWUMI | Imputation of Multivariate Time Series Based on Dynamic Time Warping |
dual | Automatic Differentiation with Dual Numbers |
dualtrees | Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform |
duawranglr | Securely Wrangle Dataset According to Data Usage Agreement |
dub | Unpacking Assignment for Lists via Pattern Matching |
duckduckr | Simple Client for the DuckDuckGo Instant Answer API |
dummies | Create dummy/indicator variables flexibly and efficiently |
dummy | Automatic Creation of Dummies with Support for Predictive Modeling |
dundermifflin | The Office Quotes on-Demand |
dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |
DunnettTests | Software implementation of step-down and step-up Dunnett test procedures |
dupiR | Bayesian inference from count data using discrete uniform priors |
dupree | Identify Duplicated R Code in a Project |
durmod | Mixed Proportional Hazard Competing Risk Model |
DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |
dvmisc | Convenience Functions, Moving Window Statistics, and Graphics |
dvqcc | Dynamic VAR - Based Control Charts for Batch Process Monitoring |
DWDLargeR | Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination |
dwdradar | Read Binary Radar Files from 'DWD' (German Weather Service) |
DWLasso | Degree Weighted Lasso |
dwlm | Doubly Weighted Linear Model |
DWreg | Parametric Regression for Discrete Response |
dyads | Dyadic Network Analysis |
dydea | Detection of Chaotic and Regular Intervals in the Data |
dygraphs | Interface to 'Dygraphs' Interactive Time Series Charting Library |
Dykstra | Quadratic Programming using Cyclic Projections |
DYM | Did You Mean? |
dyn | Time Series Regression |
dynamac | Dynamic Simulation and Testing for Single-Equation ARDL Models |
DynamicDistribution | Dynamically visualized probability distributions and their moments |
DynamicGP | Modelling and Analysis of Dynamic Computer Experiments |
dynamicGraph | dynamicGraph |
dynamichazard | Dynamic Hazard Models using State Space Models |
dynamicTreeCut | Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |
dynamo | Fit a Stochastic Dynamical Array Model to Array Data |
DynaRankR | Inferring Longitudinal Dominance Hierarchies |
DynareR | A Seamless Integration of 'R' and 'Dynare' |
dynaSpec | Dynamic Spectrogram Visualizations |
dynatopmodel | Implementation of the Dynamic TOPMODEL Hydrological Model |
dynaTree | Dynamic Trees for Learning and Design |
dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |
DynClust | Denoising and clustering for dynamical image sequence (2D or 3D)+T |
dyncomp | Complexity of Short and Coarse-Grained Time Series |
dynCorr | Dynamic Correlation Package |
dyndimred | Dimensionality Reduction Methods in a Common Format |
dynetNLAResistance | Resisting Neighbor Label Attack in a Dynamic Network |
dynfrail | Fitting Dynamic Frailty Models with the EM Algorithm |
dynia | Fit Dynamic Intervention Model |
dynlm | Dynamic Linear Regression |
dynmix | Estimation of Dynamic Finite Mixtures |
DynNom | Visualising Statistical Models using Dynamic Nomograms |
dynOmics | Fast Fourier Transform to Identify Associations Between Time Course Omics Data |
dynpanel | Dynamic Panel Data Models |
dynparam | Creating Meta-Information for Parameters |
dynpred | Companion Package to "Dynamic Prediction in Clinical Survival Analysis" |
dynprog | Dynamic Programming Domain-Specific Language |
dynr | Dynamic Modeling in R |
dynRB | Dynamic Range Boxes |
dynsbm | Dynamic Stochastic Block Models |
dynsim | Dynamic Simulations of Autoregressive Relationships |
dynsurv | Dynamic Models for Survival Data |
DynTxRegime | Methods for Estimating Optimal Dynamic Treatment Regimes |
dynutils | Common Functionality for the 'dynverse' Packages |
dynwrap | Representing and Inferring Single-Cell Trajectories |
DySeq | Functions for Dyadic Sequence Analyses |
DysPIA | Dysregulated Pathway Identification Analysis |
DysPIAData | Background and Pathway Data Used in 'DysPIA' |
e1071 | Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |
E4tools | Management and Processing Tools for Data Produced by the Empatica E4 |
eadrm | Fitting Dose-Response Models Using an Evolutionary Algorithm |
eaf | Plots of the Empirical Attainment Function |
Eagle | Multiple Locus Association Mapping on a Genome-Wide Scale |
EAinference | Estimator Augmentation and Simulation-Based Inference |
eAnalytics | Dynamic Web-Based Analytics for the Energy Industry |
earlygating | Properties of Bayesian Early Gating Designs |
earlyR | Estimation of Transmissibility in the Early Stages of a Disease Outbreak |
earlywarnings | Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries |
earth | Multivariate Adaptive Regression Splines |
earthtide | Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides |
earthtones | Derive a Color Palette from a Particular Location on Earth |
EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |
easyAHP | Analytic Hierarchy Process (AHP) |
easyalluvial | Generate Alluvial Plots with a Single Line of Code |
easyanova | Analysis of Variance and Other Important Complementary Analyses |
easyCODA | Compositional Data Analysis in Practice |
easycsv | Load Multiple 'csv' and 'txt' Tables |
easyDes | An Easy Way to Descriptive Analysis |
EasyHTMLReport | EasyHTMLReport |
EasyMARK | Utility functions for working with mark-recapture data |
EasyMx | Easy Model-Builder Functions for 'OpenMx' |
easyNCDF | Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays |
easynls | Easy Nonlinear Model |
easypackages | Easy Loading and Installing of Packages |
easypower | Sample Size Estimation for Experimental Designs |
easyPSID | Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID) |
easyPubMed | Search and Retrieve Scientific Publication Records from PubMed |
easyr | Helpful Functions from Oliver Wyman Actuarial Consulting |
easyreg | Easy Regression |
easySdcTable | Easy Interface to the Statistical Disclosure Control Package 'sdcTable' |
easySVG | An Easy SVG Basic Elements Generator |
easyVerification | Ensemble Forecast Verification for Large Data Sets |
eatDB | Spreadsheet Interface for Relational Databases |
eba | Elimination-by-Aspects Models |
ebal | Entropy reweighting to create balanced samples |
EBASS | Sample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information |
EbayesThresh | Empirical Bayes Thresholding and Related Methods |
ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |
EBEN | Empirical Bayesian Elastic Net |
ebGenotyping | Genotyping and SNP Detection using Next Generation Sequencing Data |
EBglmnet | Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models |
ebirdst | Access and Analyze eBird Status and Trends Data |
EBMAforecast | Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms |
ebmc | Ensemble-Based Methods for Class Imbalance Problem |
EBPRS | Derive Polygenic Risk Score Based on Emprical Bayes Theory |
EBrank | Empirical Bayes Ranking |
ebreg | Implementation of the Empirical Bayes Method |
ebSNP | Genotyping and SNP calling using single-sample next generation sequencing data |
ecap | Excess Certainty Adjusted Probability Estimate |
ecb | Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW) |
ecce | Translate English Words into Chinese, or Translate Chinese Words into English |
ECctmc | Simulation from Endpoint-Conditioned Continuous Time Markov Chains |
ecd | Elliptic Lambda Distribution and Option Pricing Model |
Ecdat | Data Sets for Econometrics |
ecdfHT | Empirical CDF for Heavy Tailed Data |
ecespa | Functions for Spatial Point Pattern Analysis |
ECFsup | Equal Covariance Functions Testing by L2-Norm and Sup-Norm |
Ecfun | Functions for Ecdat |
ECGofTestDx | A Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities |
ECharts2Shiny | Embedding Interactive Charts Generated with ECharts Library into Shiny Applications |
echarts4r | Create Interactive Graphs with 'Echarts JavaScript' Version 4 |
echelon | The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method |
eChem | Simulations for Electrochemistry Experiments |
echo.find | Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO) |
echogram | Echogram Visualisation and Analysis |
echor | Access EPA 'ECHO' Data |
ecipex | Efficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models |
ECLRMC | Ensemble Correlation-Based Low-Rank Matrix Completion |
eclust | Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data |
ecm | Build Error Correction Models |
ecmwfr | Interface to 'ECMWF' and 'CDS' Data Web Services |
EcoDiet | Estimating a Diet Matrix from Biotracer and Stomach Content Data |
ecodist | Dissimilarity-Based Functions for Ecological Analysis |
EcoGenetics | Management and Exploratory Analysis of Spatial Data in Landscape Genetics |
Ecohydmod | Ecohydrological Modelling |
EcoHydRology | A Community Modeling Foundation for Eco-Hydrology |
EcoIndR | Ecological Indicators |
ECoL | Complexity Measures for Supervised Problems |
ecolMod | "A practical guide to ecological modelling - using R as a simulation platform" |
ecolottery | Coalescent-Based Simulation of Ecological Communities |
EconDemand | General Analysis of Various Economics Demand Systems |
econet | Estimation of Parameter-Dependent Network Centrality Measures |
EcoNetGen | Simulate and Sample from Ecological Interaction Networks |
economiccomplexity | Computational Methods for Economic Complexity |
ecoreg | Ecological Regression using Aggregate and Individual Data |
ecorest | Conducts Analyses Informing Ecosystem Restoration Decisions |
ecoseries | An R Interface to Brazilian Central Bank and Sidra APIs and the IPEA Data |
ecosim | Toolbox for Aquatic Ecosystem Modeling |
EcoSimR | Null Model Analysis for Ecological Data |
ECOSolveR | Embedded Conic Solver in R |
ecospace | Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |
ecospat | Spatial Ecology Miscellaneous Methods |
ecotox | Analysis of Ecotoxicology |
ecotoxicology | Methods for Ecotoxicology |
EcoTroph | EcoTroph R package |
ecoval | Procedures for Ecological Assessment of Surface Waters |
EcoVirtual | Simulation of Ecological Models |
ecp | Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
ecr | Evolutionary Computation in R |
ectotemp | Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness |
ed50 | Estimate ED50 and Its Confidence Interval |
ed50simulation | Estimate ED50 and Its Confidence Interval |
EDA | Energy Decomposition Analysis |
eda4treeR | Experimental Design and Analysis for Tree Improvement |
edbuildmapr | Download School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps |
edbuildr | Automated School District Data Download and Processing |
edcc | Economic Design of Control Charts |
edci | Edge Detection and Clustering in Images |
eddi | Get Evaporative Demand Drought Index Raster Data |
eddington | Compute a Cyclist's Eddington Number |
edeaR | Exploratory and Descriptive Event-Based Data Analysis |
edeR | Email Data Extraction Using R |
edf | Read Data from European Data Format (EDF and EDF+) Files |
EDFIR | Estimating Discrimination Factors |
edfReader | Reading EDF(+) and BDF(+) Files |
edfun | Creating Empirical Distribution Functions |
edgar | Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings |
edgebundleR | Circle Plot with Bundled Edges |
edgeCorr | Spatial Edge Correction |
edgedata | Datasets that Support the EDGE Server DIY Logic |
edgeRun | More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data |
edina | Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model |
EDISON | Network Reconstruction and Changepoint Detection |
editData | 'RStudio' Addin for Editing a 'data.frame' |
EditImputeCont | Simultaneous Edit-Imputation for Continuous Microdata |
editrules | Parsing, Applying, and Manipulating Data Cleaning Rules |
eDMA | Dynamic Model Averaging with Grid Search |
EDMeasure | Energy-Based Dependence Measures |
EDOIF | Empirical Distribution Ordering Inference Framework (EDOIF) |
edrGraphicalTools | Provides Tools for Dimension Reduction Methods |
edstan | Stan Models for Item Response Theory |
EdSurvey | Analysis of NCES Education Survey and Assessment Data |
educineq | Compute and Decompose Inequality in Education |
edwards97 | Langmuir Semi-Empirical Coagulation Model |
eechidna | Exploring Election and Census Highly Informative Data Nationally for Australia |
eegkit | Toolkit for Electroencephalography Data |
eegkitdata | Data for package eegkit |
eel | Extended Empirical Likelihood |
EEM | Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |
eemR | Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |
eeptools | Convenience Functions for Education Data |
eesim | Simulate and Evaluate Time Series for Environmental Epidemiology |
EFA.dimensions | Exploratory Factor Analysis Functions for Assessing Dimensionality |
EFA.MRFA | Dimensionality Assessment Using Minimum Rank Factor Analysis |
EFAtools | Fast and Flexible Implementations of Exploratory Factor Analysis Tools |
EFAutilities | Utility Functions for Exploratory Factor Analysis |
EFDR | Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data |
effectFusion | Bayesian Effect Fusion for Categorical Predictors |
EffectLiteR | Average and Conditional Effects |
effectR | Predicts Oomycete Effectors |
effects | Effect Displays for Linear, Generalized Linear, and Other Models |
effectsize | Indices of Effect Size and Standardized Parameters |
effectsizescr | Indices for Single-Case Research |
EffectsRelBaseline | Test changes of a grouped response relative to baseline |
EffectStars | Visualization of Categorical Response Models |
EffectStars2 | Effect Stars |
EffectTreat | Prediction of Therapeutic Success |
EfficientMaxEigenpair | Efficient Initials for Computing the Maximal Eigenpair |
efflog | The Causal Effects for a Causal Loglinear Model |
effsize | Efficient Effect Size Computation |
efreadr | Read European Eddy Fluxes CSV Files |
EFS | Tool for Ensemble Feature Selection |
efts | High-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF |
ega | Error Grid Analysis |
EGAnet | Exploratory Graph Analysis - A Framework for Estimating the Number of Dimensions in Multivariate Data Using Network Psychometrics |
egcm | Engle-Granger Cointegration Models |
egg | Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |
eggCounts | Hierarchical Modelling of Faecal Egg Counts |
egor | Import and Analyse Ego-Centered Network Data |
EGRET | Exploration and Graphics for RivEr Trends |
EGRETci | Exploration and Graphics for RivEr Trends Confidence Intervals |
eGST | Leveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait |
eha | Event History Analysis |
ehaGoF | Calculates Goodness of Fit Statistics |
ehelp | Enhanced Help to Enable "Docstring"-Comments in Users Functions |
eHOF | Extended HOF (Huisman-Olff-Fresco) Models |
EHR | Electronic Health Record (EHR) Data Processing and Analysis Tool |
EHRtemporalVariability | Delineating Temporal Dataset Shifts in Electronic Health Records |
ei | Ecological Inference |
eia | API Wrapper for 'US Energy Information Administration' Open Data |
EIAdata | R Wrapper for the Energy Information Administration (EIA) API |
eicm | Explicit Interaction Community Models |
eigeninv | Generates (dense) matrices that have a given set of eigenvalues |
eigenmodel | Semiparametric Factor and Regression Models for Symmetric Relational Data |
eigenprcomp | Computes confidence intervals for principal components |
eikosograms | The Picture of Probability |
EILA | Efficient Inference of Local Ancestry |
eimpute | Efficiently Impute Large Scale Incomplete Matrix |
einet | Effective Information and Causal Emergence |
eiPack | Ecological Inference and Higher-Dimension Data Management |
eive | An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression |
eivtools | Measurement Error Modeling Tools |
EIX | Explain Interactions in 'XGBoost' |
eixport | Export Emissions to Atmospheric Models |
EKMCMC | MCMC Procedures for Estimating Enzyme Kinetics Constants |
EL | Two-sample Empirical Likelihood |
EL2Surv | Empirical Likelihood (EL) for Comparing Two Survival Functions |
elaborator | A 'shiny' Application for Exploring Laboratory Data |
elasso | Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |
elastic | General Purpose Interface to 'Elasticsearch' |
elasticIsing | Ising Network Estimation using Elastic Net and k-Fold Cross-Validation |
elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |
elasticsearchr | A Lightweight Interface for Interacting with Elasticsearch from R |
elec | Collection of Functions for Statistical Election Audits |
elec.strat | Functions for election audits using stratified random samples |
EleChemr | Electrochemical Reactions Simulation |
elect | Estimation of Life Expectancies Using Multi-State Models |
elections | USA Presidential Elections Data |
electionsBR | R Functions to Download and Clean Brazilian Electoral Data |
electivity | Algorithms for Electivity Indices |
electoral | Allocating Seats Methods and Party System Scores |
elementR | An Framework for Reducing Elemental LAICPMS Data from Solid Structures |
elevatr | Access Elevation Data from Various APIs |
elexr | Load Associated Press Election Results with Elex |
elfDistr | Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution |
elhmc | Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo |
ELISAtools | ELISA Data Analysis with Batch Correction |
elitism | Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |
elliplot | Ellipse Summary Plot of Quantiles |
ellipse | Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |
ellipsis | Tools for Working with ... |
elliptic | Weierstrass and Jacobi Elliptic Functions |
elmNNRcpp | The Extreme Learning Machine Algorithm |
ELMR | Extreme Machine Learning (ELM) |
ELMSO | Implementation of the Efficient Large-Scale Online Display Advertising Algorithm |
elo | Elo Ratings |
EloChoice | Preference Rating for Visual Stimuli Based on Elo Ratings |
EloOptimized | Optimized Elo Rating Method for Obtaining Dominance Ranks |
EloRating | Animal Dominance Hierarchies by Elo Rating |
elsa | Entropy-Based Local Indicator of Spatial Association |
ElstonStewart | Elston-Stewart Algorithm |
ELT | Experience Life Tables |
ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |
EM.Fuzzy | EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information |
EMA | Easy Microarray Data Analysis |
EMAtools | Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data |
emayili | Send Email Messages |
emba | Ensemble Boolean Model Biomarker Analysis |
EMbC | Expectation-Maximization Binary Clustering |
embed | Extra Recipes for Encoding Categorical Predictors |
EmbedSOM | Fast Embedding Guided by Self-Organizing Map |
embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |
EMC | Evolutionary Monte Carlo (EMC) algorithm |
EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |
EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |
emdbook | Support Functions and Data for "Ecological Models and Data" |
emdi | Estimating and Mapping Disaggregated Indicators |
emdist | Earth Mover's Distance |
emg | Exponentially Modified Gaussian (EMG) Distribution |
emhawkes | Exponential Multivariate Hawkes Model |
emIRT | EM Algorithms for Estimating Item Response Theory Models |
EmissV | Vehicular Emissions by Top-Down Methods |
EmiStatR | Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems |
EML | Read and Write Ecological Metadata Language Files |
emld | Ecological Metadata as Linked Data |
eMLEloglin | Fitting log-Linear Models in Sparse Contingency Tables |
emma | Evolutionary model-based multiresponse approach |
EMMAgeo | End-Member Modelling of Grain-Size Data |
emme2 | Read and Write to an EMME/2 databank |
emmeans | Estimated Marginal Means, aka Least-Squares Means |
EMMIXgene | A Mixture Model-Based Approach to the Clustering of Microarray Expression Data |
EMMIXmfa | Mixture Models with Component-Wise Factor Analyzers |
EMMLi | A Maximum Likelihood Approach to the Analysis of Modularity |
EMMREML | Fitting Mixed Models with Known Covariance Structures |
emoa | Evolutionary Multiobjective Optimization Algorithms |
emojifont | Emoji and Font Awesome in Graphics |
emon | Tools for Environmental and Ecological Survey Design |
emov | Eye Movement Analysis Package for Fixation and Saccade Detection |
EMP | Expected Maximum Profit Classification Performance Measure |
empichar | Evaluates the Empirical Characteristic Function for Multivariate Samples |
EmpiricalCalibration | Routines for Performing Empirical Calibration of Observational Study Estimates |
empiricalFDR.DESeq2 | Simulation-Based False Discovery Rate in RNA-Seq |
emplik | Empirical Likelihood Ratio for Censored/Truncated Data |
emplik2 | Empirical Likelihood Ratio Test for Two Samples with Censored Data |
ems | Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units |
EMSaov | The Analysis of Variance with EMS |
EMSC | Extended Multiplicative Signal Correction |
EMSNM | EM Algorithm for Sigmoid Normal Model |
EMSS | Some EM-Type Estimation Methods for the Heckman Selection Model |
emstreeR | Tools for Fast Computing and Plotting Euclidean Minimum Spanning Trees |
EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data |
emulator | Bayesian Emulation of Computer Programs |
emuR | Main Package of the EMU Speech Database Management System |
EMVS | The Expectation-Maximization Approach to Bayesian Variable Selection |
enc | Portable Tools for 'UTF-8' Character Data |
EncDNA | Encoding of Nucleotide Sequences into Numeric Feature Vectors |
eNchange | Ensemble Methods for Multiple Change-Point Detection |
encode | Represent Ordered Lists and Pairs as Strings |
encryptedRmd | Encrypt Html Reports Using 'Libsodium' |
encryptr | Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys |
endogenous | Classical Simultaneous Equation Models |
endogMNP | R Package for Fitting Multinomial Probit Models with Endogenous Selection |
endorse | Bayesian Measurement Models for Analyzing Endorsement Experiments |
endoSwitch | Endogenous Switching Regression Models |
endtoend | Transmissions and Receptions in an End to End Network |
energy | E-Statistics: Multivariate Inference via the Energy of Data |
EnergyOnlineCPM | Distribution Free Multivariate Control Chart Based on Energy Test |
energyr | Data Published by the United States Federal Energy Regulatory Commission |
enetLTS | Robust and Sparse Methods for High Dimensional Linear and Logistic Regression |
eNetXplorer | Quantitative Exploration of Elastic Net Families for Generalized Linear Models |
english | Translate Integers into English |
EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |
engsoccerdata | English and European Soccer Results 1871-2016 |
ENMeval | Automated Runs and Evaluations of Ecological Niche Models |
ENMTools | Analysis of Niche Evolution using Niche and Distribution Models |
enpls | Ensemble Partial Least Squares Regression |
enRich | Analysis of Multiple ChIP-Seq Data |
enrichR | Provides an R Interface to 'Enrichr' |
enrichwith | Methods to Enrich R Objects with Extra Components |
EnsCat | Clustering of Categorical Data |
EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |
ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |
EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |
ensembleMOS | Ensemble Model Output Statistics |
EnsemblePCReg | Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |
EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners |
ensemblepp | Ensemble Postprocessing Data Sets |
ensembleR | Ensemble Models in R |
ensr | Elastic Net SearcheR |
ensurer | Ensure Values at Runtime |
entcn | Translate English Words into Chinese Words |
entropart | Entropy Partitioning to Measure Diversity |
entropy | Estimation of Entropy, Mutual Information and Related Quantities |
EntropyEstimation | Estimation of Entropy and Related Quantities |
EntropyExplorer | Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |
EntropyMCMC | MCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation |
entrymodels | Estimate Entry Models |
envalysis | Miscellaneous Functions for Environmental Analyses |
EnvCpt | Detection of Structural Changes in Climate and Environment Time Series |
envDocument | Document the R Working Environment |
enveomics.R | Various Utilities for Microbial Genomics and Metagenomics |
enviGCMS | GC/LC-MS Data Analysis for Environmental Science |
enviPat | Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
enviPick | Peak Picking for High Resolution Mass Spectrometry Data |
envirem | Generation of ENVIREM Variables |
EnviroPRA | Environmental Probabilistic Risk Assessment Tools |
EnviroStat | Statistical Analysis of Environmental Space-Time Processes |
envlpaster | Enveloping the Aster Model |
envnames | Track User-Defined Environment Names |
EnvNicheR | Niche Estimation |
envoutliers | Methods for Identification of Outliers in Environmental Data |
EnvStats | Package for Environmental Statistics, Including US EPA Guidance |
eoffice | Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables |
eoR | Data Management Package (Exposure and Occurrence Data in R) |
epade | Easy Plots |
epandist | Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |
epanetReader | Read Epanet Files into R |
epca | Exploratory Principal Component Analysis |
ePCR | Ensemble Penalized Cox Regression for Survival Prediction |
EPGMr | Implementation of the Everglades Phosphorus Gradient Model |
eph | Argentina's Permanent Household Survey Data and Manipulation Utilities |
Epi | A Package for Statistical Analysis in Epidemiology |
epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |
epicontacts | Handling, Visualisation and Analysis of Epidemiological Contacts |
EpiContactTrace | Epidemiological Tool for Contact Tracing |
EpiCurve | Plot an Epidemic Curve |
epidata | Tools to Retrieve Economic Policy Institute Data Library Extracts |
epiDisplay | Epidemiological Data Display Package |
EpiDynamics | Dynamic Models in Epidemiology |
EpiEstim | Estimate Time Varying Reproduction Numbers from Epidemic Curves |
epiflows | Predicting Disease Spread from Flow Data |
epiGWAS | Robust Methods for Epistasis Detection |
EpiILM | Spatial and Network Based Individual Level Models for Epidemics |
EpiILMCT | Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics |
epikit | Miscellaneous Tools for the 'R4Epis' Project |
epimdr | Functions and Data for "Epidemics: Models and Data in R" |
EpiModel | Mathematical Modeling of Infectious Disease Dynamics |
epinet | Epidemic/Network-Related Tools |
epiphy | Analysis of Plant Disease Epidemics |
epiR | Tools for the Analysis of Epidemiological Data |
EpiReport | Epidemiological Report |
episcan | Scan Pairwise Epistasis |
episensr | Basic Sensitivity Analysis of Epidemiological Results |
EpiSignalDetection | Signal Detection Analysis |
episplineDensity | Density Estimation with Soft Information by Exponential Epi-splines |
epistasis | Detecting Epistatic Selection with Partially Observed Genotype Data |
EpiStats | Tools for Epidemiologists |
EpistemicGameTheory | Constructing an Epistemic Model for the Games with Two Players |
epitab | Flexible Contingency Tables for Epidemiology |
epitools | Epidemiology Tools |
epitrix | Small Helpers and Tricks for Epidemics Analysis |
Eplot | Plotting longitudinal series |
eplusr | A Toolkit for Using Whole Building Simulation Program 'EnergyPlus' |
eply | Apply a Function Over Expressions |
epoc | Endogenous Perturbation Analysis of Cancer |
eponge | Keep Your Environment Clean |
epos | Epilepsy Ontologies Similarities |
epr | Easy Polynomial Regression |
epsiwal | Exact Post Selection Inference with Applications to the Lasso |
EPT | Ensemble Patch Transform, Visualization and Decomposition |
epubr | Read EPUB File Metadata and Text |
epuR | Collect and Process Economic Policy Uncertainty Data |
epwshiftr | Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data |
EPX | Ensemble of Phalanxes |
epxToR | Import 'Epidata' XML Files '.epx' |
eq5d | Methods for Calculating 'EQ-5D' Utility Index Scores |
EQL | Extended-Quasi-Likelihood-Function (EQL) |
eqs2lavaan | EQS Output Conversion to lavaan Functions |
eqtl | Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis |
equalCovs | Testing the Equality of Two Covariance Matrices |
Equalden.HD | Testing the Equality of a High Dimensional Set of Densities |
equaltestMI | Examine Measurement Invariance via Equivalence Testing and Projection Method |
equate | Observed-Score Linking and Equating |
equateIRT | IRT Equating Methods |
equateMultiple | Equating of Multiple Forms |
equivalence | Provides Tests and Graphics for Assessing Tests of Equivalence |
equivalenceTest | Equivalence Test for the Means of Two Normal Distributions |
EQUIVNONINF | Testing for Equivalence and Noninferiority |
equivUMP | Uniformly Most Powerful Invariant Tests of Equivalence |
equSA | Learning High-Dimensional Graphical Models |
erah | Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |
erboost | Nonparametric Multiple Expectile Regression via ER-Boost |
ercv | Fitting Tails by the Empirical Residual Coefficient of Variation |
erer | Empirical Research in Economics with R |
ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |
ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |
ergm.ego | Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |
ergm.rank | Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |
ergm.userterms | User-specified Terms for the statnet Suite of Packages |
ergMargins | Process Analysis for Exponential Random Graph Models |
ergmharris | Local Health Department network data set |
ergmito | Exponential Random Graph Models for Small Networks |
eRm | Extended Rasch Modeling |
ERP | Significance Analysis of Event-Related Potentials Data |
erp.easy | Event-Related Potential (ERP) Data Exploration Made Easy |
erpR | Event-related potentials (ERP) analysis, graphics and utility functions |
err | Customizable Object Sensitive Messages |
errint | Builds Error Intervals |
errorist | Automatically Search Errors or Warnings |
errorizer | Function Errorizer |
errorlocate | Locate Errors with Validation Rules |
errors | Uncertainty Propagation for R Vectors |
errum | Exploratory Reduced Reparameterized Unified Model Estimation |
eRTG3D | Empirically Informed Random Trajectory Generation in 3-D |
ES | Edge Selection |
es.dif | Compute Effect Sizes of the Difference |
esaBcv | Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |
esaddle | Extended Empirical Saddlepoint Density Approximations |
esaps | Indicators of Electoral Systems and Party Systems |
esback | Expected Shortfall Backtesting |
esc | Effect Size Computation for Meta Analysis |
escalation | Modular Approach to Dose Finding Clinical Trials |
esDesign | Adaptive Enrichment Designs with Sample Size Re-Estimation |
eSDM | Ensemble Tool for Predictions from Species Distribution Models |
ESEA | ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis |
eseis | Environmental Seismology Toolbox |
ESG | ESG - A package for asset projection |
ESGtoolkit | Toolkit for Monte Carlo Simulations |
eshrink | Shrinkage for Effect Estimation |
esmisc | Misc Functions of Eduard Szöcs |
esmprep | Data Preparation During and After the Use of the Experience Sampling Methodology (ESM) |
esquisse | Explore and Visualize Your Data Interactively |
esreg | Joint Quantile and Expected Shortfall Regression |
ess | Efficient Stepwise Selection in Decomposable Models |
essHist | The Essential Histogram |
essurvey | Download Data from the European Social Survey on the Fly |
estatapi | R Interface to e-Stat API |
EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |
ESTER | Efficient Sequential Testing with Evidence Ratios |
EstHer | Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection |
estimability | Tools for Assessing Estimability of Linear Predictions |
EstimateGroupNetwork | Perform the Joint Graphical Lasso and Selects Tuning Parameters |
EstimationTools | Maximum Likelihood Estimation for Probability Functions from Data Sets |
estimatr | Fast Estimators for Design-Based Inference |
estimraw | Estimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures |
estmeansd | Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis |
EstMix | Tumor Clones Percentage Estimations |
estout | Estimates Output |
estprod | Estimation of Production Functions |
EstSimPDMP | Estimation and Simulation for PDMPs |
estudy2 | An Implementation of Parametric and Nonparametric Event Study |
esvis | Visualization and Estimation of Effect Sizes |
etable | Easy Table |
ETAS | Modeling Earthquake Data Using 'ETAS' Model |
etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description |
ETC | Equivalence to control |
ether | Interaction with the 'Ethereum' Blockchain |
ethnobotanyR | Calculate Quantitative Ethnobotany Indices |
EthSEQ | Ethnicity Annotation from Whole Exome Sequencing Data |
etl | Extract-Transform-Load Framework for Medium Data |
ETLUtils | Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |
etm | Empirical Transition Matrix |
etma | Epistasis Test in Meta-Analysis |
etrunct | Computes Moments of Univariate Truncated t Distribution |
eudract | Creates Safety Results Summary in XML to Upload to EudraCT |
eulerian | eulerian: A package to find eulerian paths from graphs |
eulerr | Area-Proportional Euler and Venn Diagrams with Ellipses |
europepmc | R Interface to the Europe PubMed Central RESTful Web Service |
europop | Historical Populations of European Cities, 1500-1800 |
EurosarcBayes | Bayesian Single Arm Sample Size Calculation Software |
eurostat | Tools for Eurostat Open Data |
evabic | Evaluation of Binary Classifiers |
EvalEst | Dynamic Systems Estimation - Extensions |
evalITR | Evaluating Individualized Treatment Rules |
evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |
EvaluateCore | Quality Evaluation of Core Collections |
EvaluationMeasures | Collection of Model Evaluation Measure Functions |
evaluator | Quantified Risk Assessment Toolkit |
EValue | Sensitivity Analyses for Unmeasured Confounding or Selection Bias in Observational Studies and Meta-Analyses |
Evapotranspiration | Modelling Actual, Potential and Reference Crop Evapotranspiration |
evclass | Evidential Distance-Based Classification |
evclust | Evidential Clustering |
EvCombR | Evidence Combination in R |
evd | Functions for Extreme Value Distributions |
evdbayes | Bayesian Analysis in Extreme Value Theory |
event | Event History Procedures and Models |
eventdataR | Event Data Repository |
EventDetectGUI | Graphical User Interface for the 'EventDetectR' Package |
EventDetectR | Event Detection Framework |
eventInterval | Sequential Event Interval Analysis |
eventr | Create Event Based Data Architectures |
events | Store and manipulate event data |
eventstream | Streaming Events and their Early Classification |
eventstudies | Event Study Analysis |
EventStudy | Event Study Analysis |
evgam | Generalised Additive Extreme Value Models |
evian | Evidential Analysis of Genetic Association Data |
evidence | Analysis of Scientific Evidence Using Bayesian and Likelihood Methods |
evidenceFactors | Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies |
evident | Evidence Factors in Observational Studies |
EviewsR | 'Eviews' Knit-Engine |
evir | Extreme Values in R |
evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |
evobiR | Comparative and Population Genetic Analyses |
evolqg | Tools for Evolutionary Quantitative Genetics |
EvolutionaryGames | Important Concepts of Evolutionary Game Theory |
evolvability | Calculation of Evolvability Parameters |
Evomorph | Evolutionary Morphometric Simulation |
evoper | Evolutionary Parameter Estimation for 'Repast Simphony' Models |
EvoRAG | Evolutionary Rates Across Gradients |
evt0 | Mean of order p, peaks over random threshold Hill and high quantile estimates |
evtclass | Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers |
evtree | Evolutionary Learning of Globally Optimal Trees |
EW | Edgeworth Expansion |
EWGoF | Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |
ewoc | Escalation with Overdose Control |
EWOC2 | Escalation with Overdose Control using 2 Drug Combinations |
EWS | Early Warning System |
Exact | Unconditional Exact Test |
exact2x2 | Exact Tests and Confidence Intervals for 2x2 Tables |
exactci | Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |
ExactCIdiff | Inductive Confidence Intervals for the difference between two proportions |
exactextractr | Fast Extraction from Raster Datasets using Polygons |
exactLoglinTest | Monte Carlo Exact Tests for Log-linear models |
exactmeta | Exact fixed effect meta analysis |
exactRankTests | Exact Distributions for Rank and Permutation Tests |
exampletestr | Help for Writing Unit Tests Based on Function Examples |
exams | Automatic Generation of Exams in R |
exams.mylearn | Question Generation in the 'MyLearn' XML Format |
ExceedanceTools | Confidence regions for exceedance sets and contour lines |
exceedProb | Confidence Intervals for Exceedance Probability |
excel.link | Convenient Data Exchange with Microsoft Excel |
ExcelFunctionsR | Imports Excel Functions to R |
excelR | A Wrapper of the 'JavaScript' Library 'jExcel' |
excerptr | Excerpt Structuring Comments from Your Code File and Set a Table of Contents |
ExcessMass | Excess Mass Calculation and Plots |
exCon | Interactive Exploration of Contour Data |
excursions | Excursion Sets and Contour Credibility Regions for Random Fields |
exdex | Estimation of the Extremal Index |
exif | Read EXIF Metadata from JPEGs |
exifr | EXIF Image Data in R |
exiftoolr | ExifTool Functionality from R |
ExomeDepth | Calls Copy Number Variants from Targeted Sequence Data |
exp2flux | Convert Gene EXPression Data to FBA FLUXes |
ExPanDaR | Explore Your Data Interactively |
expandFunctions | Feature Matrix Builder |
expands | Expanding Ploidy and Allele-Frequency on Nested Subpopulations |
ExpDE | Modular Differential Evolution for Experimenting with Operators |
ExpDes | Experimental Designs |
ExpDes.pt | Pacote Experimental Designs (Portuguese) |
experiment | R Package for Designing and Analyzing Randomized Experiments |
expert | Modeling without data using expert opinion |
ExpertChoice | Design of Discrete Choice and Conjoint Analysis |
expint | Exponential Integral and Incomplete Gamma Function |
ExplainPrediction | Explanation of Predictions for Classification and Regression Models |
explor | Interactive Interfaces for Results Exploration |
explore | Simplifies Exploratory Data Analysis |
exploreR | Tools for Quickly Exploring Data |
expm | Matrix Exponential, Log, 'etc' |
expose | Multiple Effect Estimation of Chemicals in Environmental Epidemiology |
ExPosition | Exploratory Analysis with the Singular Value Decomposition |
expp | Spatial Analysis of Extra-Pair Paternity |
expperm | Computing Expectations and Marginal Likelihoods for Permutations |
ExpRep | Experiment Repetitions |
exPrior | Prior Distributions Using a Bayesian Hierarchical Framework |
expSBM | An Exponential Stochastic Block Model for Interaction Lengths |
expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |
expss | Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics |
exptest | Tests for Exponentiality |
exreport | Fast, Reliable and Elegant Reproducible Research |
EXRQ | Extreme Regression of Quantiles |
exsic | Convenience Functions for Botanists to Create Specimens Indices |
extdplyr | Data Manipulation Extensions of 'Dplyr' and 'Tidyr' |
extendedFamily | Additional Families for Generalized Linear Models |
exteriorMatch | Constructs the Exterior Match from Two Matched Control Groups |
extfunnel | Additional Funnel Plot Augmentations |
extlasso | Maximum penalized likelihood estimation with extended lasso penalty |
ExtMallows | An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation |
extraBinomial | Extra-binomial approach for pooled sequencing data |
ExtractTrainData | Extract Values from Raster |
extraDistr | Additional Univariate and Multivariate Distributions |
extrafont | Tools for using fonts |
extrafontdb | Package for holding the database for the extrafont package |
extraoperators | Extra Binary Relational and Logical Operators |
extras | Helper Functions for Bayesian Analyses |
extraterrestrial | Astrobiology Equations Estimating Extraterrestrial Life |
extraTrees | Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression |
extRC | Extended RC Models for Contingency Tables |
ExtremalDep | Extremal Dependence Models |
ExtremeBounds | Extreme Bounds Analysis (EBA) |
extremefit | Estimation of Extreme Conditional Quantiles and Probabilities |
extremeIndex | Forecast Verification for Extreme Events |
ExtremeRisks | Extreme Risk Measures |
extRemes | Extreme Value Analysis |
extremeStat | Extreme Value Statistics and Quantile Estimation |
extremevalues | Univariate Outlier Detection |
extremis | Statistics of Extremes |
extremogram | Estimation of Extreme Value Dependence for Time Series Data |
extWeibQuant | Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture |
exuber | Econometric Analysis of Explosive Time Series |
eye | Analysis of Eye Data |
eyelinker | Import ASC Files from EyeLink Eye Trackers |
eyetracking | Eyetracking Helper Functions |
eyeTrackR | Organising and Analysing Eye-Tracking Data |
ez | Easy Analysis and Visualization of Factorial Experiments |
ezcox | Easily Process a Batch of Cox Models |
ezCutoffs | Fit Measure Cutoffs in SEM |
ezec | Easy Interface to Effective Concentration Calculations |
ezEDA | Task Oriented Interface for Exploratory Data Analysis |
ezglm | selects significant non-additive interaction between two variables using fast GLM implementation |
ezknitr | Avoid the Typical Working Directory Pain When Using 'knitr' |
ezmmek | Analysis of Enzyme Activities on Synthetic Substrates using Michaelis-Menten Kinetics |
ezpickr | Easy Data Import Using GUI File Picker and Seamless Communication Between an Excel and R |
ezplot | Functions for Common Chart Types |
ezsim | provide an easy to use framework to conduct simulation |
EZtune | Tunes AdaBoost, Support Vector Machines, and Gradient Boosting Machines |
fabCI | FAB Confidence Intervals |
FABInference | FAB p-Values and Confidence Intervals |
fable | Forecasting Models for Tidy Time Series |
fabletools | Core Tools for Packages in the 'fable' Framework |
fabMix | Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components |
fabricatr | Imagine Your Data Before You Collect It |
fabricerin | Create Easily Canvas in 'shiny' and 'RMarkdown' Documents |
face | Fast Covariance Estimation for Sparse Functional Data |
facerec | An Interface for Face Recognition |
facilitation | A C++ Framework for Plant-Plant Interaction IBMs |
FacPad | Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment |
FactMixtAnalysis | Factor Mixture Analysis with covariates |
FACTMLE | Maximum Likelihood Factor Analysis |
FactoClass | Combination of Factorial Methods and Cluster Analysis |
factoextra | Extract and Visualize the Results of Multivariate Data Analyses |
FactoInvestigate | Automatic Description of Factorial Analysis |
FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |
factoptd | Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments |
factor.switching | Post-Processing MCMC Outputs of Bayesian Factor Analytic Models |
FactorAssumptions | Set of Assumptions for Factor and Principal Component Analysis |
factorcpt | Simultaneous Change-Point and Factor Analysis |
factorEx | Design and Analysis for Factorial Experiments |
factorial2x2 | Design and Analysis of a 2x2 Factorial Trial |
factorMerger | The Merging Path Plot |
factorplot | Graphical Presentation of Simple Contrasts |
factorQR | Bayesian quantile regression factor models |
FactorsR | Identification of the Factors Affecting Species Richness |
factorstochvol | Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models |
factory | Build Function Factories |
Factoshiny | Perform Factorial Analysis from 'FactoMineR' with a Shiny Application |
factset.analyticsapi.engines | 'FactSet' Engines API Client |
factset.protobuf.stach | 'FactSet' 'STACH' Library |
factualR | thin wrapper for the Factual.com server API |
fad | Factor Analysis for Data |
FADA | Variable Selection for Supervised Classification in High Dimension |
FAdist | Distributions that are Sometimes Used in Hydrology |
Fahrmeir | Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz |
fail | File Abstraction Interface Layer (FAIL) |
fairadapt | Fair Data Adaptation with Quantile Preservation |
fairml | Fair Models in Machine Learning |
fairness | Algorithmic Fairness Metrics |
faisalconjoint | Faisal Conjoint Model: A New Approach to Conjoint Analysis |
fakemake | Mock the Unix Make Utility |
fakeR | Simulates Data from a Data Frame of Different Variable Types |
falcon | Finding Allele-Specific Copy Number in Next-Generation Sequencing Data |
falconx | Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data |
fam.recrisk | Familial Recurrence Risk |
fam2r | From 'Familias' to R |
fame | Interface for FAME Time Series Database |
FamEvent | Family Age-at-Onset Data Simulation and Penetrance Estimation |
Familias | Probabilities for Pedigrees Given DNA Data |
FAMILY | A Convex Formulation for Modeling Interactions with Strong Heredity |
FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |
FAMoS | A Flexible Algorithm for Model Selection |
famSKATRC | Family Sequence Kernel Association Test for Rare and Common Variants |
FAMT | Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data |
fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |
fANCOVA | Nonparametric Analysis of Covariance |
fancycut | A Fancy Version of 'base::cut' |
fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |
fansi | ANSI Control Sequence Aware String Functions |
FAOSTAT | Download Data from the FAOSTAT Database |
faoutlier | Influential Case Detection Methods for Factor Analysis and Structural Equation Models |
faq | Create FAQ Page |
far | Modelization for Functional AutoRegressive Processes |
faraway | Functions and Datasets for Books by Julian Faraway |
FARDEEP | Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares |
farff | A Faster 'ARFF' File Reader and Writer |
FarmSelect | Factor Adjusted Robust Model Selection |
FarmTest | Factor-Adjusted Robust Multiple Testing |
farrell | Interactive Interface to Data Envelopment Analysis Modeling |
farver | High Performance Colour Space Manipulation |
FASeg | Joint Segmentation of Correlated Time Series |
fAsianOptions | Rmetrics - EBM and Asian Option Valuation |
fasjem | A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models |
fAssets | Rmetrics - Analysing and Modelling Financial Assets |
fasstr | Analyze, Summarize, and Visualize Daily Streamflow Data |
fast | Implementation of the Fourier Amplitude Sensitivity Test (FAST) |
fasta | Fast Adaptive Shrinkage/Thresholding Algorithm |
fastAdaboost | a Fast Implementation of Adaboost |
FastBandChol | Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor |
fastclime | A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector |
fastcluster | Fast Hierarchical Clustering Routines for R and 'Python' |
fastcmh | Significant Interval Discovery with Categorical Covariates |
fastcmprsk | Fine-Gray Regression via Forward-Backward Scan |
fastcox | Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm |
FastCUB | Fast EM and Best-Subset Selection for CUB Models for Rating Data |
fastdigest | Fast, Low Memory-Footprint Digests of R Objects |
fastDummies | Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables |
fasteraster | Raster Image Processing and Vector Recognition |
fasterElasticNet | An Amazing Fast Way to Fit Elastic Net |
fasterize | Fast Polygon to Raster Conversion |
FastGaSP | Fast and Exact Computation of Gaussian Stochastic Process |
fastGHQuad | Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature |
fastglm | Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' |
FastGP | Efficiently Using Gaussian Processes with Rcpp and RcppEigen |
fastGraph | Fast Drawing and Shading of Graphs of Statistical Distributions |
FastHCS | Robust Algorithm for Principal Component Analysis |
fastHICA | Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis |
fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |
fastJT | Efficient Jonckheere-Terpstra Test Statistics for Robust Machine Learning and Genome-Wide Association Studies |
FastKM | A Fast Multiple-Kernel Method Based on a Low-Rank Approximation |
FastKNN | Fast k-Nearest Neighbors |
fastLink | Fast Probabilistic Record Linkage with Missing Data |
fastlogranktest | A Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests |
FastLZeroSpikeInference | Fast Nonconvex Deconvolution of Calcium Imaging Data |
fastM | Fast Computation of Multivariate M-Estimators |
fastmap | Fast Implementation of a Key-Value Store |
fastmaRching | Fast Marching Method for Modelling Evolving Boundaries |
fastmatch | Fast match() function |
fastmit | Fast Mutual Information Based Independence Test |
fastNaiveBayes | Extremely Fast Implementation of a Naive Bayes Classifier |
fastnet | Large-Scale Social Network Analysis |
FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |
fastpos | Finds the Critical Sequential Point of Stability for a Pearson Correlation |
fastpseudo | Fast Pseudo Observations |
fastqcr | Quality Control of Sequencing Data |
fastquant | Backtest Investment Strategies with 3 Lines of Code |
fastR2 | Foundations and Applications of Statistics Using R (2nd Edition) |
FastRCS | Fits the FastRCS Robust Multivariable Linear Regression Model |
FastRWeb | Fast Interactive Framework for Web Scripting Using R |
FastSF | Fast Structural Filtering |
fastshap | Fast Approximate Shapley Values |
fastSOM | Fast Calculation of Spillover Measures |
fastStat | Faster for Statistic Work |
fastTextR | An Interface to the 'fastText' Library |
fasttime | Fast Utility Function for Time Parsing and Conversion |
fat2Lpoly | Two-Locus Family-Based Association Test with Polytomous Outcome |
FateID | Quantification of Fate Bias in Multipotent Progenitors |
FatTailsR | Kiener Distributions and Fat Tails in Finance |
FaultTree | Fault Trees for Risk and Reliability Analysis |
fauxnaif | Convert Values to NA |
fauxpas | HTTP Error Helpers |
favnums | A Dataset of Favourite Numbers |
FAwR | Functions and Datasets for "Forest Analytics with R" |
fbar | An Extensible Approach to Flux Balance Analysis |
fBasics | Rmetrics - Markets and Basic Statistics |
fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |
FBFsearch | Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors |
FBN | FISH Based Normalization and Copy Number inference of SNP microarray data |
fBonds | Rmetrics - Pricing and Evaluating Bonds |
fbRads | Analyzing and Managing Facebook Ads from R |
fbRanks | Association Football (Soccer) Ranking via Poisson Regression |
fbroc | Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves |
fbst | The Full Bayesian Significance Test and the e-Value |
fc | Standard Evaluation-Based Multivariate Function Composition |
fcaR | Formal Concept Analysis |
fcd | Fused Community Detection |
fCertificates | Basics of Certificates and Structured Products Valuation |
FCGR | Fatigue Crack Growth in Reliability |
FcircSEC | Full Length Circular RNA Sequence Extraction and Classification |
fclust | Fuzzy Clustering |
fcm | Inference of Fuzzy Cognitive Maps (FCMs) |
FCMapper | Fuzzy Cognitive Mapping |
fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |
FCPS | Fundamental Clustering Problems Suite |
fcr | Functional Concurrent Regression for Sparse Data |
fcros | A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations |
FCSlib | A Collection of Fluorescence Fluctuation Spectroscopy Methods |
fcuk | The Ultimate Helper for Clumsy Fingers |
FD | Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology |
fda | Functional Data Analysis |
fda.usc | Functional Data Analysis and Utilities for Statistical Computing |
fdaACF | Autocorrelation Function for Functional Time Series |
fdadensity | Functional Data Analysis for Density Functions by Transformation to a Hilbert Space |
fdakma | Functional Data Analysis: K-Mean Alignment |
fdaMixed | Functional Data Analysis in a Mixed Model Framework |
fdANOVA | Analysis of Variance for Univariate and Multivariate Functional Data |
fdapace | Functional Data Analysis and Empirical Dynamics |
fdaPDE | Statistical Analysis of Functional and Spatial Data, Based on Regression with PDE Regularization |
fdasrvf | Elastic Functional Data Analysis |
fdatest | Interval Testing Procedure for Functional Data |
FDboost | Boosting Functional Regression Models |
fdcov | Analysis of Covariance Operators |
fddm | Fast Implementation of the Diffusion Decision Model |
fdistr | Frequency Distribution Tables |
fdm2id | Data Mining and R Programming for Beginners |
fDMA | Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes |
fdq | Forest Data Quality |
fdrci | Permutation-Based FDR Point and Confidence Interval Estimation |
fdrDiscreteNull | False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions |
FDRreg | False discovery rate regression |
FDRsampsize | Compute Sample Size that Meets Requirements for Average Power and FDR |
FDRSeg | FDR-Control in Multiscale Change-Point Segmentation |
fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |
fds | Functional Data Sets |
fdth | Frequency Distribution Tables, Histograms and Polygons |
FDX | False Discovery Exceedance Controlling Multiple Testing Procedures |
FeaLect | Scores Features for Feature Selection |
feasts | Feature Extraction and Statistics for Time Series |
feather | R Bindings to the Feather 'API' |
feature | Local Inferential Feature Significance for Multivariate Kernel Density Estimation |
featureCorMatrix | Measurement Level Independent Feature Correlation Matrix |
featurefinder | Feature Finder |
FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |
FeatureImpCluster | Feature Importance for Partitional Clustering |
features | Feature Extraction for Discretely-Sampled Functional Data |
featuretoolsR | Interact with the 'Python' Module 'Featuretools' |
featurizer | Some Helper Functions that Help Create Features from Data |
febr | Free Brazilian Repository for Open Soil Data |
fec16 | Data Package for the 2016 United States Federal Elections |
fechner | Fechnerian Scaling of Discrete Object Sets |
FedData | Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources |
federalregister | Client Package for the U.S. Federal Register API |
fedregs | Text Analysis of the US Code of Federal Regulations |
fedreporter | Interface to Federal 'RePORTER' API |
FeedbackTS | Analysis of Feedback in Time Series |
feedeR | Read RSS/Atom Feeds from R |
feisr | Estimating Fixed Effects Individual Slope Models |
fellov | Feasible Ellipse Overlap |
felp | Functional Help for Functions, Objects, and Packages |
fence | Using Fence Methods for Model Selection |
FENmlm | Fixed Effects Nonlinear Maximum Likelihood Models |
FEprovideR | Fixed Effects Logistic Model with High-Dimensional Parameters |
fergm | Estimation and Fit Assessment of Frailty Exponential Random Graph Models |
fermicatsR | Fermi Large Area Telescope Catalogs |
FertBoot | Fertilizer Response Curve Analysis by Bootstrapping Residuals |
FESta | Fishing Effort Standardisation |
fExoticOptions | Rmetrics - Pricing and Evaluating Exotic Option |
fExpressCertificates | Structured Products Valuation for ExpressCertificates/Autocallables |
fExtremes | Rmetrics - Modelling Extreme Events in Finance |
ff | Memory-Efficient Storage of Large Data on Disk and Fast Access Functions |
ffbase | Basic Statistical Functions for Package 'ff' |
FFD | Freedom from Disease |
FField | Force field simulation for a set of points |
ffmanova | Fifty-Fifty MANOVA |
ffmetadata | Access to Fragile Families Metadata |
ffstream | Forgetting Factor Methods for Change Detection in Streaming Data |
fftw | Fast FFT and DCT Based on the FFTW Library |
fftwtools | Wrapper for 'FFTW3' Includes: One-Dimensional Univariate, One-Dimensional Multivariate, and Two-Dimensional Transform |
fgac | Generalized Archimedean Copula |
FGalgorithm | Flury and Gautschi algorithms |
fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |
fgdr | Utilities for Fundamental Geo-Spatial Data |
fgeo | Analyze Forest Diversity and Dynamics |
fgeo.analyze | Analyze ForestGEO Data |
fgeo.plot | Plot ForestGEO Data |
fgeo.tool | Import and Manipulate ForestGEO Data |
fgeo.x | Access Small ForestGEO Datasets For Examples |
fgm | Partial Separability and Functional Gaussian Graphical Models |
Fgmutils | Forest Growth Model Utilities |
fgof | Fast Goodness-of-fit Test |
fgpt | Floating Grid Permutation Technique |
FGSG | Feature Grouping and Selection Over an Undirected Graph |
fgui | Function GUI |
FHDI | Fractional Hot Deck and Fully Efficient Fractional Imputation |
fhidata | Structural Data for Norway |
fhircrackr | Handling HL7 FHIR Resources in R |
FHtest | Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class |
FI | Provide functions for forest inventory calculations |
FIACH | Retrospective Noise Control for fMRI |
fiberLD | Fiber Length Determination |
fic | Focused Information Criteria for Model Comparison |
fICA | Classical, Reloaded and Adaptive FastICA Algorithms |
fieldRS | Remote Sensing Field Work Tools |
fields | Tools for Spatial Data |
FieldSim | Random Fields (and Bridges) Simulations |
fiery | A Lightweight and Flexible Web Framework |
filehash | Simple Key-Value Database |
filehashSQLite | Simple key-value database using SQLite |
filelock | Portable File Locking |
filematrix | File-Backed Matrix Class with Convenient Read and Write Access |
filenamer | Easy Management of File Names |
files | Effective File Navigation from the R Console |
filesstrings | Handy File and String Manipulation |
filling | Matrix Completion, Imputation, and Inpainting Methods |
fillr | Fill Missing Values in Vectors |
fImport | Rmetrics - Importing Economic and Financial Data |
finalfit | Quickly Create Elegant Regression Results Tables and Plots when Modelling |
FinAna | Financial Analysis and Regression Diagnostic Analysis |
FinancialInstrument | Financial Instrument Model Infrastructure and Meta-Data |
FinancialMath | Financial Mathematics for Actuaries |
FinAsym | Classifies implicit trading activity from market quotes and computes the probability of informed trading |
finbif | Interface for the 'Finnish Biodiversity Information Facility' API |
FinCal | Time Value of Money, Time Series Analysis and Computational Finance |
finch | Parse Darwin Core Files |
FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |
FindAllRoots | Find all root(s) of the equation and Find root(s) of the equation by dichotomy |
FindIt | Finding Heterogeneous Treatment Effects |
findpython | Functions to Find an Acceptable Python Binary |
findR | Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching |
findviews | A View Generator for Multidimensional Data |
FinePop | Fine-Scale Population Analysis |
FinePop2 | Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis) |
fingerprint | Functions to Operate on Binary Fingerprint Data |
fingerPro | Sediment Source Fingerprinting |
fingertipscharts | Produce Charts that you See on the Fingertips Website |
fingertipsR | Fingertips Data for Public Health |
finiteruinprob | Computation of the Probability of Ruin Within a Finite Time Horizon |
finity | Test for Finiteness of Moments in a Distribution |
finreportr | Financial Data from U.S. Securities and Exchange Commission |
FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |
fipe | Access to Average Purchase Price of Vehicles in Brazil |
FiRE | Finder of Rare Entities (FiRE) |
firebase | Integrates 'Google Firebase' Authentication Method with 'Shiny' |
firebehavioR | Prediction of Wildland Fire Behavior and Hazard |
FiSh | Fisher-Shannon Method |
fishbc | Fishes of British Columbia |
fishdata | A Small Collection of Fish Population Datasets |
FisherEM | The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data |
fisheyeR | Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R |
fishflux | Model Elemental Fluxes in Fishes |
FisHiCal | Iterative FISH-based Calibration of Hi-C Data |
fishkirkko2015 | Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland |
fishmethods | Fishery Science Methods and Models |
fishMod | Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models |
fishmove | Prediction of Fish Movement Parameters |
FishResp | Analytical Tool for Aquatic Respirometry |
fishtree | Interface to the Fish Tree of Life API |
fishualize | Color Palettes Based on Fish Species |
FisPro | Fuzzy Inference System Design and Optimization |
FIT | Transcriptomic Dynamics Models in Field Conditions |
fit.models | Compare Fitted Models |
FitAR | Subset AR Model Fitting |
FitARMA | Fit ARMA or ARIMA Using Fast MLE Algorithm |
fitbitScraper | Scrapes Data from Fitbit |
fitConic | Fit Data to Any Conic Section |
fitdc | Garmin FIT File Decoder |
fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |
fitDRC | Fitting Density Ratio Classes |
fitHeavyTail | Mean and Covariance Matrix Estimation under Heavy Tails |
fitODBOD | Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD |
fitplc | Fit Hydraulic Vulnerability Curves |
fitPoly | Genotype Calling for Bi-Allelic Marker Assays |
FITSio | FITS (Flexible Image Transport System) Utilities |
fitteR | Fit Hundreds of Theoretical Distributions to Empirical Data |
fitTetra | fitTetra is an R package for assigning tetraploid genotype scores |
FitUltD | Fit Univariate Mixed and Usual Distributions |
fitur | Fit Univariate Distributions |
fitzRoy | Easily Scrape and Process AFL Data |
fivethirtyeight | Data and Code Behind the Stories and Interactives at 'FiveThirtyEight' |
FixedPoint | Algorithms for Finding Fixed Point Vectors of Functions |
fixedTimeEvents | The Distribution of Distances Between Discrete Events in Fixed Time |
fixerapi | An R Client for the "Fixer.io" Currency API |
fixest | Fast Fixed-Effects Estimations |
FixSeqMTP | Fixed Sequence Multiple Testing Procedures |
fizzbuzzR | Fizz Buzz Implementation |
FKF | Fast Kalman Filter |
FKSUM | Fast Kernel Sums |
flacco | Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems |
flagr | Implementation of Flag Aggregation |
flair | Highlight, Annotate, and Format your R Source Code |
flam | Fits Piecewise Constant Models with Data-Adaptive Knots |
FLAME | Interpretable Matching for Causal Inference |
flamingos | Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') |
flan | FLuctuation ANalysis on Mutation Models |
flars | Functional LARS |
flashClust | Implementation of optimal hierarchical clustering |
flashlight | Shed Light on Black Box Machine Learning Models |
flatr | Transforms Contingency Tables to Data Frames, and Analyses Them |
flattabler | Obtaining a Flat Table from Pivot Tables |
flatxml | Tools for Working with XML Files as R Dataframes |
flexclust | Flexible Cluster Algorithms |
flexCWM | Flexible Cluster-Weighted Modeling |
flexdashboard | R Markdown Format for Flexible Dashboards |
FlexDir | Tools to Work with the Flexible Dirichlet Distribution |
FlexGAM | Generalized Additive Models with Flexible Response Functions |
flexmet | Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model |
flexmix | Flexible Mixture Modeling |
flexmixNL | Finite Mixture Modeling of Generalized Nonlinear Models |
FlexParamCurve | Tools to Fit Flexible Parametric Curves |
flexpolyline | Flexible Polyline Encoding |
flexrsurv | Flexible Relative Survival Analysis |
FlexScan | Flexible Scan Statistics |
flexsurv | Flexible Parametric Survival and Multi-State Models |
flexsurvcure | Flexible Parametric Cure Models |
flextable | Functions for Tabular Reporting |
FlickrAPI | Access to Flickr API |
flifo | Don't Get Stuck with Stacks in R |
flightplanning | UAV Flight Planning |
flightplot | Plotting Flight Paths on Maps |
FLightR | Reconstruct Animal Paths from Solar Geolocation Loggers Data |
flip | Multivariate Permutation Tests |
flipscores | Robust Score Testing in GLMs, by Sign-Flip Contributions |
FLLat | Fused Lasso Latent Feature Model |
float | 32-Bit Floats |
flobr | Convert Files to and from Binary Objects (BLOBs) |
flock | Process Synchronization Using File Locks |
flood | Statistical Methods for the (Regional) Analysis of Flood Frequency |
FloodMapper | Cross-Scale Flooding Prediction under Heavy Precipitation |
flora | Tools for Interacting with the Brazilian Flora 2020 |
florestal | Results for Forest Inventories |
flowDiv | Cytometric Diversity Indices from Gated Data |
flower | Tools for characterizing flowering traits |
flowfield | Forecasts future values of a univariate time series |
flowr | Streamlining Design and Deployment of Complex Workflows |
FlowRegEnvCost | The Environmental Costs of Flow Regulation |
flows | Flow Selection and Analysis |
FlowScreen | Daily Streamflow Trend and Change Point Screening |
FLR | Fuzzy Logic Rule Classifier |
flsa | Path Algorithm for the General Fused Lasso Signal Approximator |
FLSSS | Mining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems |
FluMoDL | Influenza-Attributable Mortality with Distributed-Lag Models |
fluoSurv | Estimate Insect Survival from Fluorescence Data |
Flury | Data Sets from Flury, 1997 |
fluspect | Fluspect-B |
flux | Flux rate calculation from dynamic closed chamber measurements |
fluxweb | Estimate Energy Fluxes in Food Webs |
flying | Simulation of Bird Flight Range |
fma | Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998) |
FMAdist | Frequentist Model Averaging Distribution |
fmbasics | Financial Market Building Blocks |
FMC | Factorial Experiments with Minimum Level Changes |
FMCCSD | Efficient Estimation of Clustered Current Status Data |
fmcmc | A friendly MCMC framework |
fmdates | Financial Market Date Calculations |
FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis |
FMP | Filtered Monotonic Polynomial IRT Models |
FMradio | Factor Modeling for Radiomics Data |
fmri | Analysis of fMRI Experiments |
fmriqa | Functional MRI Quality Assurance Routines |
fmsb | Functions for Medical Statistics Book with some Demographic Data |
FMsmsnReg | Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors |
FMStable | Finite Moment Stable Distributions |
fMultivar | Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions |
FNN | Fast Nearest Neighbor Search Algorithms and Applications |
fNonlinear | Rmetrics - Nonlinear and Chaotic Time Series Modelling |
foba | greedy variable selection |
FOCI | Feature Ordering by Conditional Independence |
focusedMDS | Focused, Interactive Multidimensional Scaling |
foghorn | Summarize CRAN Check Results in the Terminal |
foieGras | Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour |
folderfun | Creates and Manages Folder Functions for Portable Large-Scale R Analysis |
fontBitstreamVera | Fonts with 'Bitstream Vera Fonts' License |
fontcm | Computer Modern font for use with extrafont package |
fontHind | Additional 'ggplot2' Themes Using 'Hind' Fonts |
fontLiberation | Liberation Fonts |
fontMPlus | Additional 'ggplot2' Themes Using 'M+' Fonts |
fontquiver | Set of Installed Fonts |
foodingraph | Food Network Inference and Visualization |
foodweb | visualisation and analysis of food web networks |
foolbox | Function Manipulation Toolbox |
fOptions | Rmetrics - Pricing and Evaluating Basic Options |
forams | Foraminifera and Community Ecology Analyses |
forcats | Tools for Working with Categorical Variables (Factors) |
foreach | Provides Foreach Looping Construct |
ForeCA | Forecastable Component Analysis |
forecast | Forecasting Functions for Time Series and Linear Models |
ForecastComb | Forecast Combination Methods |
ForecastCombinations | Forecast Combinations |
ForecastFramework | A Basis for Modular Model Creation |
forecastHybrid | Convenient Functions for Ensemble Time Series Forecasts |
forecastML | Time Series Forecasting with Machine Learning Methods |
forecastSNSTS | Forecasting for Stationary and Non-Stationary Time Series |
ForecastTB | Test Bench for the Comparison of Forecast Methods |
forecTheta | Forecasting Time Series by Theta Models |
foreign | Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ... |
forensic | Statistical Methods in Forensic Genetics |
forensim | Statistical tools for the interpretation of forensic DNA mixtures |
foreSIGHT | Systems Insights from Generation of Hydroclimatic Timeseries |
forestChange | Computing Essential Biodiversity Variables from Global Forest Change Data |
forestControl | Approximate False Positive Rate Control in Selection Frequency for Random Forest |
ForestDisc | Forest Discretization |
forestError | A Unified Framework for Random Forest Prediction Error Estimation |
ForestFit | Statistical Modelling for Plant Size Distributions |
ForestGapR | Tropical Forest Gaps Analysis |
forestHES | Forest Health Evaluation System at the Forest Stand Level in China |
forestinventory | Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories |
forestmangr | Forest Mensuration and Management |
forestmodel | Forest Plots from Regression Models |
forestplot | Advanced Forest Plot Using 'grid' Graphics |
forestr | Ecosystem and Canopy Structural Complexity Metrics from LiDAR |
forestRK | Implements the Forest-R.K. Algorithm for Classification Problems |
forestry | Reshape Data Tree |
forestSAS | Forest Spatial Structure Analysis Systems |
ForestTools | Analyzing Remotely Sensed Forest Data |
foretell | Projecting Customer Retention Based on Fader and Hardie Probability Models |
forge | Casting Values into Shape |
ForImp | Imputation of Missing Values Through a Forward Imputation Algorithm |
ForIT | Functions from the 2nd Italian Forest Inventory (INFC) |
FormalSeries | Elementary arithemtic in formal series rings |
formatR | Format R Code Automatically |
formattable | Create 'Formattable' Data Structures |
Formula | Extended Model Formulas |
formula.tools | Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects |
formulaic | Dynamic Generation and Quality Checks of Formula Objects |
formulops | Mathematical Operations on R Formula |
forrel | Forensic Pedigree Analysis and Relatedness Inference |
fortunes | R Fortunes |
forward | Robust Analysis using Forward Search |
forwards | Data from Surveys Conducted by Forwards |
ForwardSearch | Forward Search using asymptotic theory |
fossil | Palaeoecological and Palaeogeographical Analysis Tools |
FossilSim | Simulation of Fossil and Taxonomy Data |
foto | Fourier Transform Textural Ordination |
FourgameteP | FourGamete Test |
fourierin | Computes Numeric Fourier Integrals |
fourPNO | Bayesian 4 Parameter Item Response Model |
FourScores | A Game for Human vs. Human or Human vs. AI |
fpa | Spatio-Temporal Fixation Pattern Analysis |
fpc | Flexible Procedures for Clustering |
fpca | Restricted MLE for Functional Principal Components Analysis |
FPCA2D | Two Dimensional Functional Principal Component Analysis |
FPCA3D | Three Dimensional Functional Component Analysis |
fpCompare | Reliable Comparison of Floating Point Numbers |
FPDclustering | PD-Clustering and Factor PD-Clustering |
fpeek | Check Text Files Content at a Glance |
fpest | Estimating Finite Population Total |
fplot | Automatic Distribution Graphs Using Formulas |
fplyr | Apply Functions to Blocks of Files |
fpmoutliers | Frequent Pattern Mining Outliers |
fpop | Segmentation using Optimal Partitioning and Function Pruning |
fPortfolio | Rmetrics - Portfolio Selection and Optimization |
fpow | Computing the noncentrality parameter of the noncentral F distribution |
fpp | Data for "Forecasting: principles and practice" |
fpp2 | Data for "Forecasting: Principles and Practice" (2nd Edition) |
fpp3 | Data for "Forecasting: Principles and Practice" (3rd Edition) |
fptdApprox | Approximation of First-Passage-Time Densities for Diffusion Processes |
FPV | Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment |
fracdiff | Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |
fracprolif | Fraction Proliferation via a Quiescent Growth Model |
fractaldim | Estimation of fractal dimensions |
FractalParameterEstimation | Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model |
FRACTION | Numeric number into fraction |
fractional | Vulgar Fractions in R |
fragility | Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes |
Fragman | Fragment Analysis in R |
frailtyEM | Fitting Frailty Models with the EM Algorithm |
frailtyHL | Frailty Models via Hierarchical Likelihood |
frailtypack | General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints |
frailtySurv | General Semiparametric Shared Frailty Model |
frair | Tools for Functional Response Analysis |
frambgrowth | Simulation of the Growth of Framboidal and Sunflower Pyrite |
Frames2 | Estimation in Dual Frame Surveys |
franc | Detect the Language of Text |
FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |
frapplot | Automatic Data Processing and Visualization for FRAP |
frbs | Fuzzy Rule-Based Systems for Classification and Regression Tasks |
FRCC | Fast Regularized Canonical Correlation Analysis |
frechet | Statistical Analysis for Random Objects and Non-Euclidean Data |
freealg | The Free Algebra |
freegroup | The Free Group |
FreeSortR | Free Sorting Data Analysis |
freesurfer | Wrapper Functions for 'Freesurfer' |
freesurferformats | Read and Write 'FreeSurfer' Neuroimaging File Formats |
FREEtree | Tree Method for High Dimensional Longitudinal Data |
freetypeharfbuzz | Deterministic Computation of Text Box Metrics |
fRegression | Rmetrics - Regression Based Decision and Prediction |
frenchCurve | Generate Open or Closed Interpolating Curves |
FREQ | FREQ: Estimate population size from capture frequencies |
freqdist | Frequency Distribution |
freqdom | Frequency Domain Based Analysis: Dynamic PCA |
freqdom.fda | Functional Time Series: Dynamic Functional Principal Components |
freqparcoord | Novel Methods for Parallel Coordinates |
FreqProf | Frequency Profiles Computing and Plotting |
freqtables | Make Quick Descriptive Tables for Categorical Variables |
frequency | Easy Frequency Tables |
frequencyConnectedness | Spectral Decomposition of Connectedness Measures |
frequentdirections | Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching |
FRESA.CAD | Feature Selection Algorithms for Computer Aided Diagnosis |
fresh | Create Custom 'Bootstrap' Themes to Use in 'Shiny' |
FrF2 | Fractional Factorial Designs with 2-Level Factors |
FrF2.catlg128 | Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words |
FRK | Fixed Rank Kriging |
fRLR | Fit Repeated Linear Regressions |
frm | Regression Analysis of Fractional Responses |
frmhet | Regression Analysis of Fractional Responses Under Unobserved Heterogeneity |
frmpd | Regression Analysis of Panel Fractional Responses |
frmqa | The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance |
fromo | Fast Robust Moments |
frontier | Stochastic Frontier Analysis |
frontiles | Partial Frontier Efficiency Analysis |
frost | Prediction of Minimum Temperature for Frost Forecasting in Agriculture |
frostr | R API to MET Norway's 'Frost' API |
frt | Full Randomization Test |
fs | Cross-Platform File System Operations Based on 'libuv' |
FSA | Simple Fisheries Stock Assessment Methods |
FSAdata | Data to Support Fish Stock Assessment ('FSA') Package |
fsbrain | Managing and Visualizing Brain Surface Data |
fscaret | Automated Feature Selection from 'caret' |
fsdaR | Robust Data Analysis Through Monitoring and Dynamic Visualization |
FSelector | Selecting Attributes |
FSelectorRcpp | 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support |
fsia | Import and Analysis of OMR Data from FormScanner |
FSinR | Feature Selection |
FSInteract | Fast Searches for Interactions |
FSK2R | An Interface Between the 'FSK-ML' Standard and 'R' |
fslr | Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB') |
fsMTS | Feature Selection for Multivariate Time Series |
FSMUMI | Imputation of Time Series Based on Fuzzy Logic |
fso | Fuzzy Set Ordination |
fSRM | Social Relations Analyses with Roles ("Family SRM") |
fssemR | Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network |
FSSF | Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube |
fst | Lightning Fast Serialization of Data Frames for R |
Fstability | Calculate Feature Stability |
fstcore | R Bindings to the 'Fstlib' Library |
fsthet | Fst-Heterozygosity Smoothed Quantiles |
FSTpackage | Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores |
ftDK | A Wrapper for the API of the Danish Parliament |
ftExtra | Extensions for 'Flextable' |
FTICRMS | Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data |
ftnonpar | Features and Strings for Nonparametric Regression |
fTrading | Rmetrics - Trading and Rebalancing Financial Instruments |
fts | R Interface to 'tslib' (a Time Series Library in C++) |
ftsa | Functional Time Series Analysis |
ftsspec | Spectral Density Estimation and Comparison for Functional Time Series |
fuel | Framework for Unified Estimation in Lognormal Models |
fueleconomy | EPA Fuel Economy Data |
fugeR | FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic |
fugue | Sensitivity Analysis Optimized for Matched Sets of Varied Sizes |
fullfact | Full Factorial Breeding Analysis |
fulltext | Full Text of 'Scholarly' Articles Across Many Data Sources |
fun | Use R for Fun |
funbarRF | Fungal Species Identification using DNA Barcode with Random Forest |
FunCC | Functional Cheng and Church Bi-Clustering |
funchir | Convenience Functions by Michael Chirico |
FunChisq | Model-Free Functional Chi-Squared and Exact Tests |
FunCluster | Functional Profiling of Microarray Expression Data |
FuncMap | Hive Plots of R Package Function Calls |
functional | Curry, Compose, and other higher-order functions |
functools | Functional Programming in R |
funData | An S4 Class for Functional Data |
funest | Functional Ensemble Survival Tree for Dynamic Prediction |
funFEM | Clustering in the Discriminative Functional Subspace |
fungible | Psychometric Functions from the Waller Lab |
funGp | Gaussian Process Models for Scalar and Functional Inputs |
funHDDC | Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces |
funique | A Faster Unique Function |
fUnitRoots | Rmetrics - Modelling Trends and Unit Roots |
funLBM | Model-Based Co-Clustering of Functional Data |
funModeling | Exploratory Data Analysis and Data Preparation Tool-Box |
funneljoin | Time-Based Joins to Analyze Sequences of Events |
FunnelPlotR | Funnel Plots for Indirectly-Standardised Ratios |
funnelR | Funnel Plots for Proportion Data |
funprog | Functional Programming |
funr | Simple Utility Providing Terminal Access to all R Functions |
funrar | Functional Rarity Indices Computation |
funreg | Functional Regression for Irregularly Timed Data |
FUNTA | Functional Tangential Angle Pseudo-Depth |
funtimes | Functions for Time Series Analysis |
furniture | Furniture for Quantitative Scientists |
furrr | Apply Mapping Functions in Parallel using Futures |
fusedest | Block Splitting Algorithm for Estimation with Fused Penalty Functions |
fuser | Fused Lasso for High-Dimensional Regression over Groups |
fusionclust | Clustering and Feature Screening using L1 Fusion Penalty |
FusionLearn | Fusion Learning |
futile.logger | A Logging Utility for R |
futile.options | Futile Options Management |
futile.paradigm | A framework for working in a functional programming paradigm in R |
futility | Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up |
future | Unified Parallel and Distributed Processing in R for Everyone |
future.apply | Apply Function to Elements in Parallel using Futures |
future.BatchJobs | A Future API for Parallel and Distributed Processing using BatchJobs |
future.batchtools | A Future API for Parallel and Distributed Processing using 'batchtools' |
future.callr | A Future API for Parallel Processing using 'callr' |
future.tests | Test Suite for 'Future' API Backends |
futureheatwaves | Find, Characterize, and Explore Extreme Events in Climate Projections |
fuzzr | Fuzz-Test R Functions |
Fuzzy.p.value | Computing Fuzzy p-Value |
FuzzyAHP | (Fuzzy) AHP Calculation |
fuzzyFDR | Exact calculation of fuzzy decision rules for multiple testing |
fuzzyforest | Fuzzy Forests |
fuzzyjoin | Join Tables Together on Inexact Matching |
FuzzyLP | Fuzzy Linear Programming |
FuzzyMCDM | Multi-Criteria Decision Making Methods for Fuzzy Data |
FuzzyNumbers | Tools to Deal with Fuzzy Numbers |
FuzzyNumbers.Ext.2 | Apply Two Fuzzy Numbers on a Monotone Function |
FuzzyR | Fuzzy Logic Toolkit for R |
fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |
fuzzyreg | Fuzzy Linear Regression |
fuzzySim | Fuzzy Similarity in Species Distributions |
FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |
FuzzyStatTra | Statistical Methods for Trapezoidal Fuzzy Numbers |
FuzzySTs | Fuzzy Statistical Tools |
FuzzyToolkitUoN | Type 1 Fuzzy Logic Toolkit |
fuzzywuzzyR | Fuzzy String Matching |
FWDselect | Selecting Variables in Regression Models |
fwi.fbp | Fire Weather Index System and Fire Behaviour Prediction System Calculations |
fwsim | Fisher-Wright Population Simulation |
fxregime | Exchange Rate Regime Analysis |
fxtract | Feature Extraction from Grouped Data |
fy | Utilities for Financial Years |
g.data | Delayed-Data Packages |
G1DBN | A package performing Dynamic Bayesian Network inference |
g2f | Find and Fill Gaps in Metabolic Networks |
G2Sd | Grain-Size Statistics and Description of Sediment |
g3viz | Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram |
GA | Genetic Algorithms |
GAabbreviate | Abbreviating Items Measures using Genetic Algorithms |
GABi | Framework for Generalized Subspace Pattern Mining |
GACFF | Genetic Similarity in User-Based Collaborative Filtering |
GAD | GAD: Analysis of variance from general principles |
GADAG | A Genetic Algorithm for Learning Directed Acyclic Graphs |
gadget2 | Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox |
GaDiFPT | First Passage Time Simulation for Gaussian Diffusion Processes |
GADMTools | Easy Use of 'GADM' Maps |
gafit | Genetic Algorithm for Curve Fitting |
gaiah | Genetic and Isotopic Assignment Accounting for Habitat Suitability |
gainML | Machine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators |
gains | Lift (Gains) Tables and Charts |
GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |
galts | Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation |
gam | Generalized Additive Models |
gama | Genetic Approach to Maximize Clustering Criterion |
gamair | Data for 'GAMs: An Introduction with R' |
gambin | Fit the Gambin Model to Species Abundance Distributions |
GAMBoost | Generalized linear and additive models by likelihood based boosting |
gamboostLSS | Boosting Methods for 'GAMLSS' |
gamboostMSM | Estimating multistate models using gamboost() |
gamCopula | Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas |
GAMens | Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification |
gameofthrones | Palettes Inspired in the TV Show "Game of Thrones" |
games | Statistical Estimation of Game-Theoretic Models |
gamesGA | Genetic Algorithm for Sequential Symmetric Games |
GameTheory | Cooperative Game Theory |
GameTheoryAllocation | Tools for Calculating Allocations in Game Theory |
gamlr | Gamma Lasso Regression |
gamlss | Generalised Additive Models for Location Scale and Shape |
gamlss.add | Extra Additive Terms for Generalized Additive Models for Location Scale and Shape |
gamlss.cens | Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions |
gamlss.countKinf | Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions |
gamlss.data | GAMLSS Data |
gamlss.demo | Demos for GAMLSS |
gamlss.dist | Distributions for Generalized Additive Models for Location Scale and Shape |
gamlss.inf | Fitting Mixed (Inflated and Adjusted) Distributions |
gamlss.mx | Fitting Mixture Distributions with GAMLSS |
gamlss.nl | Fitting non linear parametric GAMLSS models |
gamlss.spatial | Spatial Terms in Generalized Additive Models for Location Scale and Shape Models |
gamlss.tr | Generating and Fitting Truncated ‘gamlss.family’ Distributions |
gamlss.util | GAMLSS Utilities |
gamlssbssn | Bimodal Skew Symmetric Normal Distribution |
gamm4 | Generalized Additive Mixed Models using 'mgcv' and 'lme4' |
gamm4.test | Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods |
Gammareg | Classic Gamma Regression: Joint Modeling of Mean and Shape Parameters |
gammSlice | Generalized Additive Mixed Model Analysis via Slice Sampling |
gamreg | Robust and Sparse Regression via Gamma-Divergence |
gamRR | Calculate the RR for the GAM |
gamsel | Fit Regularization Path for Generalized Additive Models |
ganalytics | Interact with 'Google Analytics' |
GANPA | Gene Association Network-based Pathway Analysis |
GANPAdata | The GANPA Datasets Package |
gap | Genetic Analysis Package |
gap.datasets | Datasets for 'gap' |
GAparsimony | Searching Parsimony Models with Genetic Algorithms |
gapfill | Fill Missing Values in Satellite Data |
gapminder | Data from Gapminder |
garchx | Flexible and Robust GARCH-X Modelling |
gargle | Utilities for Working with Google APIs |
garma | Fitting and Forecasting Gegenbauer ARMA Time Series Models |
garray | Generalized Array Arithmetic for Ragged Arrays with Named Margins |
GAS | Generalized Autoregressive Score Models |
gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |
gasfluxes | Greenhouse Gas Flux Calculation from Chamber Measurements |
gasper | Graph Signal Processing |
gastempt | Analyzing Gastric Emptying from MRI or Scintigraphy |
gaston | Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models |
gatepoints | Easily Gate or Select Points on a Scatter Plot |
GauPro | Gaussian Process Fitting |
gausscov | The Gaussian Covariate Method for Variable Selection |
gaussDiff | Difference measures for multivariate Gaussian probability density functions |
gaussfacts | The Greatest Mathematician Since Antiquity |
GaussianHMM1d | Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models |
gaussquad | Collection of functions for Gaussian quadrature |
gazepath | Parse Eye-Tracking Data into Fixations |
gb | Generalize Lambda Distribution and Generalized Bootstrapping |
GB2 | Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation |
GB2group | Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data |
gbfs | Interface with Live Bikeshare Data |
GBJ | Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies |
gbm | Generalized Boosted Regression Models |
gbm2sas | Convert GBM Object Trees to SAS Code |
gbp | A Bin Packing Problem Solver |
gbRd | Utilities for processing Rd objects and files |
gbs2ploidy | Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data |
gbts | Hyperparameter Search for Gradient Boosted Trees |
gbutils | Simulation of Real and Complex Numbers and Small Programming Utilities |
GCAI.bias | Guided Correction Approach for Inherited bias (GCAI.bias) |
GCalcium | A Data Manipulation and Analysis Package for Calcium Indicator Data |
GCalignR | Simple Peak Alignment for Gas-Chromatography Data |
gCat | Graph-based two-sample tests for categorical data |
gcbd | 'GPU'/CPU Benchmarking in Debian-Based Systems |
GCD | Global Charcoal Database |
gcdnet | LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm |
gcerisk | Generalized Competing Event Model |
gcForest | Deep Forest Model |
gcite | Google Citation Parser |
gcKrig | Analysis of Geostatistical Count Data using Gaussian Copulas |
gclm | Graphical Continuous Lyapunov Models |
gclus | Clustering Graphics |
gcmr | Gaussian Copula Marginal Regression |
gconcord | Concord method for Graphical Model Selection |
gcookbook | Data for "R Graphics Cookbook" |
GCPM | Generalized Credit Portfolio Model |
GD | Geographical Detectors for Assessing Spatial Factors |
GDAdata | Datasets for the Book Graphical Data Analysis with R |
gdalcubes | Earth Observation Data Cubes from Satellite Image Collections |
gdalUtilities | Wrappers for 'GDAL' Utilities Executables |
gdalUtils | Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities |
gdata | Various R Programming Tools for Data Manipulation |
GDAtools | A Toolbox for Geometric Data Analysis and More |
gDefrag | Graph-Based Landscape De-Fragmentation |
GDELTtools | Download, slice, and normalize GDELT data |
gdiff | Graphical Difference Testing |
gdimap | Generalized Diffusion Magnetic Resonance Imaging |
GDINA | The Generalized DINA Model Framework |
gdistance | Distances and Routes on Geographical Grids |
gdm | Generalized Dissimilarity Modeling |
gdmp | Genomic Data Management |
gdns | Tools to Work with Google's 'DNS'-over-'HTTPS' ('DoH') API |
gdpc | Generalized Dynamic Principal Components |
gds | Descriptive Statistics of Grouped Data |
gdtools | Utilities for Graphical Rendering |
gdxdt | IO for GAMS GDX Files using 'data.table' |
GE | General Equilibrium Modeling |
gear | Geostatistical Analysis in R |
GeDS | Geometrically Designed Spline Regression |
gee | Generalized Estimation Equation Solver |
gee4 | Generalised Estimating Equations (GEE/WGEE) using 'Armadillo' and S4 |
GEEaSPU | Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) |
geecure | Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations |
geeM | Solve Generalized Estimating Equations |
GEEmediate | Mediation Analysis for Generalized Linear Models Using the Difference Method |
geepack | Generalized Estimating Equation Package |
geesmv | Modified Variance Estimators for Generalized Estimating Equations |
geex | An API for M-Estimation |
geigen | Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack |
geiger | Analysis of Evolutionary Diversification |
GEint | Misspecified Models for Gene-Environment Interaction |
gelnet | Generalized Elastic Nets |
gemlog | File Conversion for 'Gem Infrasound Logger' |
gemma2 | GEMMA Multivariate Linear Mixed Model |
gems | Generalized Multistate Simulation Model |
gemtc | Network Meta-Analysis Using Bayesian Methods |
gen2stage | Generalized Two-Stage Designs for Phase II Single-Arm Studies |
gen3sis | General Engine for Eco-Evolutionary Simulations |
gen5helper | Processing 'Gen5' 2.06 Exported Data |
genalg | R Based Genetic Algorithm |
GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |
genasis | Global ENvironmental ASsessment Information System (GENASIS) computational tools |
genBaRcode | Analysis and Visualization Tools for Genetic Barcode Data |
genBart | Generate 'BART' File |
GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |
gencve | General Cross Validation Engine |
gendata | Generate and Modify Synthetic Datasets |
gender | Predict Gender from Names Using Historical Data |
genderBR | Predict Gender from Brazilian First Names |
gendist | Generated Probability Distribution Models |
GENEAclassify | Segmentation and Classification of Accelerometer Data |
GENEAread | Package for Reading Binary Files |
GENEAsphere | Visualisation of Raw or Segmented Accelerometer Data |
GeneBook | Multi-Types Gene ID Converting/Annotating |
GeneClusterNet | Gene Expression Clustering and Gene Network |
GeneCycle | Identification of Periodically Expressed Genes |
GeneF | Package for Generalized F-statistics |
geneHummus | A Pipeline to Define Gene Families in Legumes and Beyond |
geneListPie | Profiling a gene list into GOslim or KEGG function pie |
genemodel | Gene Model Plotting in R |
GeneNet | Modeling and Inferring Gene Networks |
geneNetBP | Belief Propagation in Genotype-Phenotype Networks |
genepi | Genetic Epidemiology Design and Inference |
genepop | Population Genetic Data Analysis Using Genepop |
generalCorr | Generalized Correlations and Plausible Causal Paths |
generalhoslem | Goodness of Fit Tests for Logistic Regression Models |
GeneralisedCovarianceMeasure | Test for Conditional Independence Based on the Generalized Covariance Measure (GCM) |
GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |
GeneralizedUmatrix | Credible Visualization for Two-Dimensional Projections of Data |
GeneralOaxaca | Blinder-Oaxaca Decomposition for Generalized Linear Model |
generator | Generate Data Containing Fake Personally Identifiable Information |
generics | Common S3 Generics not Provided by Base R Methods Related to Model Fitting |
genero | Estimate Gender from Names in Spanish and Portuguese |
geneSignatureFinder | A Gene-signatures finder tools |
GenEst | Generalized Mortality Estimator |
genesysr | Genesys PGR Client |
genetics | Population Genetics |
GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |
GeNetIt | Spatial Graph-Theoretic Genetic Gravity Modelling |
GenForImp | The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data |
genie | Fast, Robust, and Outlier Resistant Hierarchical Clustering |
genieclust | The Genie++ Hierarchical Clustering Algorithm with Noise Points Detection |
genio | Genetics Input/Output Functions |
genius | Easily Access Song Lyrics from Genius.com |
geniusr | Tools for Working with the 'Genius' API |
GenKern | Functions for generating and manipulating binned kernel density estimates |
genlasso | Path Algorithm for Generalized Lasso Problems |
GENLIB | Genealogical Data Analysis |
genlogis | Generalized Logistic Distribution |
GENMETA | Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm |
geno2proteo | Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci |
genodds | Generalized Odds Ratios |
genogeographer | Methods for Analysing Forensic Ancestry Informative Markers |
genomeplot | 'Plot genome wide values for all chromosomes' |
genomic.autocorr | Models Dealing with Spatial Dependency in Genomic Data |
GenomicMating | Efficient Breeding by Genomic Mating |
genomicper | Circular Genomic Permutation using Gwas p-Values of Association |
GenomicTools | Collection of Tools for Genomic Data Analysis |
GenomicTools.fileHandler | File Handlers for Genomic Data Analysis |
genoPlotR | Plot Publication-Grade Gene and Genome Maps |
GenOrd | Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions |
GenoScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
genotypeR | SNP Genotype Marker Design and Analysis |
genpathmox | Generalized Pathmox Approach Segmentation Tree Analysis |
genpwr | Power Calculations Under Genetic Model Misspecification |
genridge | Generalized Ridge Trace Plots for Ridge Regression |
GenSA | Generalized Simulated Annealing |
genscore | Generalized Score Matching Estimators |
gensemble | Generalized Ensemble Methods |
gensphere | Generalized Spherical Distributions |
genSurv | Generating Multi-State Survival Data |
gensvm | A Generalized Multiclass Support Vector Machine |
GenTag | Generate Color Tag Sequences |
genTS | R Shiny App for Creating Simplified Trial Summary (TS) Domain |
GenWin | Spline Based Window Boundaries for Genomic Analyses |
geoaxe | Split 'Geospatial' Objects into Pieces |
geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |
GeoBoxplot | Geographic Box Plot |
geobr | Loads Shapefiles of Official Spatial Data Sets of Brazil |
geocacheR | Tools for Geocaching |
geodaData | Spatial Analysis Datasets for Teaching |
GeoDE | A geometrical Approach to Differential expression and gene-set enrichment |
geodetector | Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation |
geodist | Fast, Dependency-Free Geodesic Distance Calculations |
geodiv | Methods for Calculating Gradient Surface Metrics |
geodrawr | Making Geospatial Objects |
geoelectrics | 3D-Visualization of Geoelectric Resistivity Measurement Profiles |
geofacet | 'ggplot2' Faceting Utilities for Geographical Data |
geofd | Spatial Prediction for Function Value Data |
geoGAM | Select Sparse Geoadditive Models for Spatial Prediction |
geogrid | Turn Geospatial Polygons into Regular or Hexagonal Grids |
geohashTools | Tools for Working with Geohashes |
geojson | Classes for 'GeoJSON' |
geojsonio | Convert Data from and to 'GeoJSON' or 'TopoJSON' |
geojsonlint | Tools for Validating 'GeoJSON' |
geojsonR | A GeoJson Processing Toolkit |
geojsonsf | GeoJSON to Simple Feature Converter |
geoknife | Web-Processing of Large Gridded Datasets |
GeoLight | Analysis of Light Based Geolocator Data |
GEOmap | Topographic and Geologic Mapping |
geomapdata | Data for topographic and Geologic Mapping |
GeomComb | (Geometric) Forecast Combination Methods |
geomedb | Functions for Fetching 'GeOMe-db' Data |
geomerge | Geospatial Data Integration |
geometa | Tools for Reading and Writing ISO/OGC Geographic Metadata |
geometr | Generate and Modify Interoperable Geometric Shapes |
geometry | Mesh Generation and Surface Tessellation |
GeoMongo | Geospatial Queries Using 'PyMongo' |
geomorph | Geometric Morphometric Analyses of 2D/3D Landmark Data |
geonames | Interface to the "Geonames" Spatial Query Web Service |
geonapi | 'GeoNetwork' API R Interface |
geonetwork | Geographic Networks |
geoops | 'GeoJSON' Topology Calculations and Operations |
geophys | Geophysics, Continuum Mechanics, Gravity Modeling |
geoR | Analysis of Geostatistical Data |
GeoRange | Calculating Geographic Range from Occurrence Data |
georob | Robust Geostatistical Analysis of Spatial Data |
geosapi | GeoServer REST API R Interface |
geoscale | Geological Time Scale Plotting |
geosed | Smallest Enclosing Disc for Latitude and Longitude Points |
geospark | Bring Local Sf to Spark |
geoSpectral | Classes and Methods for Working with Spectral Data with Space-Time Attributes |
geosphere | Spherical Trigonometry |
geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |
geosptdb | Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression |
geostatsp | Geostatistical Modelling with Likelihood and Bayes |
GeoTcgaData | Processing various types of data on GEO and TCGA |
geotech | Geotechnical Engineering |
geotools | Geo tools |
geotoolsR | Tools to Improve the Use of Geostatistic |
geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |
geoTS | Methods for Handling and Analyzing Time Series of Satellite Images |
geouy | Geographic Information of Uruguay |
geoviz | Elevation and GPS Data Visualisation |
geozoning | Zoning Methods for Spatial Data |
geozoo | Zoo of Geometric Objects |
gepaf | Google Encoded Polyline Algorithm Format |
germanpolls | German Polling Data |
GermaParl | Download and Augment the Corpus of Plenary Protocols of the German Bundestag |
GerminaR | Indices and Graphics for Assess Seed Germination Process |
germinationmetrics | Seed Germination Indices and Curve Fitting |
gert | Simple Git Client for R |
gesca | Generalized Structured Component Analysis (GSCA) |
GESE | Gene-Based Segregation Test |
gesisdata | Reproducible Data Retrieval from the GESIS Data Archive |
gestalt | Tools for Making and Combining Functions |
gestate | Generalised Survival Trial Assessment Tool Environment |
GESTr | Gene Expression State Transformation |
GET | Global Envelopes |
GetBCBData | Imports Datasets from BCB (Central Bank of Brazil) using Its Official API |
getCRUCLdata | 'CRU' 'CL' v. 2.0 Climatology Client |
GetDFPData | Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System |
gethr | Access to Ethereum-Based Blockchains Through Geth Nodes |
getlandsat | Get Landsat 8 Data from Amazon Public Data Sets |
getLattes | Import and Process Data from the 'Lattes' Curriculum Platform |
GetLattesData | Reading Bibliometric Data from Lattes Platform |
getMet | Get Meteorological Data for Hydrologic Models |
getmstatistic | Quantifying Systematic Heterogeneity in Meta-Analysis |
getopt | C-Like 'getopt' Behavior |
GetoptLong | Parsing Command-Line Arguments and Simple Variable Interpolation |
getPass | Masked User Input |
getProxy | Get Free Proxy IP and Port |
GetQuandlData | Fast and Cached Import of Data from 'Quandl' Using the 'json API' |
GetR | GetR: Calculate Guttman error trees in R |
gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |
getspres | SPRE Statistics for Exploring Heterogeneity in Meta-Analysis |
getTBinR | Access and Summarise World Health Organization Tuberculosis Data |
GetTDData | Get Data for Brazilian Bonds (Tesouro Direto) |
gettz | Get the Timezone Information |
GEVcdn | GEV Conditional Density Estimation Network |
GEVStableGarch | ARMA-GARCH/APARCH Models with GEV and Stable Distributions |
GExMap | A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data |
gexp | Generator of Experiments |
GFA | Group Factor Analysis |
gfcanalysis | Tools for Working with Hansen et al. Global Forest Change Dataset |
GFD | Tests for General Factorial Designs |
GFE | Gross Flows Estimation under Complex Surveys |
gfer | Green Finance and Environmental Risk |
GFGM.copula | Generalized Farlie-Gumbel-Morgenstern Copula |
gfmR | Implements Group Fused Multinomial Regression |
gfonts | Offline 'Google' Fonts for 'Markdown' and 'Shiny' |
gfoRmula | Parametric G-Formula |
gg.gap | Define Segments in y-Axis for 'ggplot2' |
ggallin | Grab Bag of 'ggplot2' Functions |
ggalluvial | Alluvial Plots in 'ggplot2' |
GGally | Extension to 'ggplot2' |
ggalt | Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' |
ggamma | Generalized Gamma Probability Distribution |
gganimate | A Grammar of Animated Graphics |
ggasym | Asymmetric Matrix Plotting in 'ggplot2' |
ggbeeswarm | Categorical Scatter (Violin Point) Plots |
ggBubbles | Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2' |
ggbuildr | Save Incremental Builds of Plots |
ggbump | Bump Chart and Sigmoid Curves |
ggcharts | Shorten the Distance from Data Visualization Idea to Actual Plot |
ggChernoff | Chernoff Faces for 'ggplot2' |
GGClassification | Gabriel Graph Based Large-Margin Classifiers |
ggconf | Simpler Appearance Modification of 'ggplot2' |
ggcorrplot | Visualization of a Correlation Matrix using 'ggplot2' |
ggdag | Analyze and Create Elegant Directed Acyclic Graphs |
ggdark | Dark Mode for 'ggplot2' Themes |
ggdemetra | 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra' |
ggdendro | Create Dendrograms and Tree Diagrams Using 'ggplot2' |
ggdist | Visualizations of Distributions and Uncertainty |
ggdmc | Cognitive Models |
gge | Genotype Plus Genotype-by-Environment Biplots |
ggeasy | Easy Access to 'ggplot2' Commands |
GGEBiplotGUI | Interactive GGE Biplots in R |
GGEBiplots | GGE Biplots with 'ggplot2' |
ggedit | Interactive 'ggplot2' Layer and Theme Aesthetic Editor |
ggeffects | Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs |
ggenealogy | Visualization Tools for Genealogical Data |
ggetho | Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data |
ggExtra | Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements |
ggfan | Summarise a Distribution Through Coloured Intervals |
ggfittext | Fit Text Inside a Box in 'ggplot2' |
ggfocus | Scales that Focus Specific Levels in your ggplot() |
ggforce | Accelerating 'ggplot2' |
ggformula | Formula Interface to the Grammar of Graphics |
ggfortify | Data Visualization Tools for Statistical Analysis Results |
gggenes | Draw Gene Arrow Maps in 'ggplot2' |
ggghost | Capture the Spirit of Your 'ggplot2' Calls |
gggibbous | Moon Charts, a Pie Chart Alternative |
ggguitar | Utilities for Creating Guitar Tablature |
gghalfnorm | Create a Half Normal Plot Using 'ggplot2' |
gghalves | Compose Half-Half Plots Using Your Favourite Geoms |
gghighlight | Highlight Lines and Points in 'ggplot2' |
ggimage | Use Image in 'ggplot2' |
ggimg | Graphics Layers for Plotting Image Data with 'ggplot2' |
gginference | Visualise the Results of Inferential Statistics using 'ggplot2' |
gginnards | Explore the Innards of 'ggplot2' Objects |
GGIR | Raw Accelerometer Data Analysis |
ggiraph | Make 'ggplot2' Graphics Interactive |
ggiraphExtra | Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' |
ggjoy | Joyplots in 'ggplot2' |
gglasso | Group Lasso Penalized Learning Using a Unified BMD Algorithm |
gglogo | Geom for Logo Sequence Plots |
ggloop | Create 'ggplot2' Plots in a Loop |
gglorenz | Plotting Lorenz Curve with the Blessing of 'ggplot2' |
ggm | Graphical Markov Models with Mixed Graphs |
ggmap | Spatial Visualization with ggplot2 |
ggmcmc | Tools for Analyzing MCMC Simulations from Bayesian Inference |
ggmix | Variable Selection in Linear Mixed Models for SNP Data |
GGMM | Mixture Gaussian Graphical Models |
GGMncv | Gaussian Graphical Models with Non-Convex Penalties |
ggmosaic | Mosaic Plots in the 'ggplot2' Framework |
ggmr | Generalized Gauss Markov Regression |
GGMridge | Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation |
ggmsa | Plot Multiple Sequence Alignment using 'ggplot2' |
GGMselect | Gaussian Graphs Models Selection |
ggmuller | Create Muller Plots of Evolutionary Dynamics |
ggnetwork | Geometries to Plot Networks with 'ggplot2' |
ggnewscale | Multiple Fill and Colour Scales in 'ggplot2' |
ggnormalviolin | A 'ggplot2' Extension to Make Normal Violin Plots |
ggnuplot | Make 'ggplot2' Look Like 'gnuplot' |
ggpacman | A 'ggplot2' and 'gganimate' Version of Pac-Man |
ggpage | Creates Page Layout Visualizations |
ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |
ggparliament | Parliament Plots |
ggparty | 'ggplot' Visualizations for the 'partykit' Package |
ggperiodic | Easy Plotting of Periodic Data with 'ggplot2' |
ggplot.multistats | Multiple Summary Statistics for Binned Stats/Geometries |
ggplot2 | Create Elegant Data Visualisations Using the Grammar of Graphics |
ggplot2movies | Movies Data |
ggplotAssist | 'RStudio' Addin for Teaching and Learning 'ggplot2' |
ggplotgui | Create Ggplots via a Graphical User Interface |
ggplotify | Convert Plot to 'grob' or 'ggplot' Object |
ggplotlyExtra | Extra Convenience Functions for 'Plotly' |
ggpmisc | Miscellaneous Extensions to 'ggplot2' |
ggPMX | 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models |
ggpointdensity | A Cross Between a 2D Density Plot and a Scatter Plot |
ggpol | Visualizing Social Science Data with 'ggplot2' |
ggpolypath | Polygons with Holes for the Grammar of Graphics |
ggpubr | 'ggplot2' Based Publication Ready Plots |
ggpval | Annotate Statistical Tests for 'ggplot2' |
ggQC | Quality Control Charts for 'ggplot' |
ggQQunif | Compare Big Datasets to the Uniform Distribution |
ggquickeda | Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables |
ggquiver | Quiver Plots for 'ggplot2' |
ggRandomForests | Visually Exploring Random Forests |
ggraph | An Implementation of Grammar of Graphics for Graphs and Networks |
ggraptR | Allows Interactive Visualization of Data Through a Web Browser GUI |
ggrasp | Gaussian-Based Genome Representative Selector with Prioritization |
ggrastr | Raster Layers for 'ggplot2' |
ggrepel | Automatically Position Non-Overlapping Text Labels with 'ggplot2' |
ggResidpanel | Panels and Interactive Versions of Diagnostic Plots using 'ggplot2' |
ggridges | Ridgeline Plots in 'ggplot2' |
ggrisk | Risk Score Plot for Cox Regression |
ggROC | package for roc curve plot with ggplot2 |
ggroups | Pedigree and Genetic Groups |
ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' |
ggseas | 'stats' for Seasonal Adjustment on the Fly with 'ggplot2' |
ggseqlogo | A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |
ggsignif | Significance Brackets for 'ggplot2' |
ggsn | North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap' |
ggsoccer | Plot Soccer Event Data |
ggsolvencyii | A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM |
ggsom | New Data Visualisations for SOMs Networks |
ggspatial | Spatial Data Framework for ggplot2 |
ggspectra | Extensions to 'ggplot2' for Radiation Spectra |
ggstance | Horizontal 'ggplot2' Components |
ggstar | Star Layer for 'ggplot2' |
ggstatsplot | 'ggplot2' Based Plots with Statistical Details |
ggstudent | Continuous Confidence Interval Plots using t-Distribution |
ggswissmaps | Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects |
ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |
ggtext | Improved Text Rendering Support for 'ggplot2' |
ggThemeAssist | Add-in to Customize 'ggplot2' Themes |
ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |
ggTimeSeries | Time Series Visualisations Using the Grammar of Graphics |
GGUM | Generalized Graded Unfolding Model |
ggupset | Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots |
ggVennDiagram | A 'ggplot2' Implement of Venn Diagram |
ggversa | Graficas Versatiles Con 'ggplot2' |
ggvis | Interactive Grammar of Graphics |
ggvoronoi | Voronoi Diagrams and Heatmaps with 'ggplot2' |
ggwordcloud | A Word Cloud Geom for 'ggplot2' |
gh | 'GitHub' 'API' |
Ghat | Quantifying Evolution and Selection on Complex Traits |
ghibli | Studio Ghibli Colour Palettes |
Ghost | Missing Data Segments Imputation in Multivariate Streams |
ghql | General Purpose 'GraphQL' Client |
GHQp | Gauss Hermite Quadrature with pruning |
GHS | Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler |
ghyp | Generalized Hyperbolic Distribution and Its Special Cases |
ghypernet | Fit and Simulate Generalised Hypergeometric Ensembles of Graphs |
GiANT | Gene Set Uncertainty in Enrichment Analysis |
gibble | Geometry Decomposition |
gibbs.met | Naive Gibbs Sampling with Metropolis Steps |
GibbsACOV | Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models |
gif | Graphical Independence Filtering |
Gifi | Multivariate Analysis with Optimal Scaling |
gifski | Highest Quality GIF Encoder |
gifti | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information |
GIFTr | GIFT Questions Format Generator from Dataframes |
GIGrvg | Random Variate Generator for the GIG Distribution |
GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |
GillespieSSA2 | Gillespie's Stochastic Simulation Algorithm for Impatient People |
gim | Generalized Integration Model |
gimme | Group Iterative Multiple Model Estimation |
gimmeTools | Supplemental Tools for the 'gimme' R Package |
gimms | Download and Process GIMMS NDVI3g Data |
GiNA | High Throughput Phenotyping |
GiniDistance | A New Gini Correlation Between Quantitative and Qualitative Variables |
GiniWegNeg | Computing the Gini-Based Coefficients for Weighted and Negative Attributes |
GInSARCorW | GACOS InSAR Correction Workflow |
gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |
giphyr | R Interface to the Giphy API |
GiRaF | Gibbs Random Fields Analysis |
GISTools | Some further GIS capabilities for R |
gistr | Work with 'GitHub' 'Gists' |
git2r | Provides Access to Git Repositories |
git2rdata | Store and Retrieve Data.frames in a Git Repository |
gitgadget | Rstudio Addin for Version Control and Assignment Management using Git |
githubinstall | A Helpful Way to Install R Packages Hosted on GitHub |
gitignore | Create Useful .gitignore Files for your Project |
gitlabr | Access to the Gitlab API |
gitlink | Add 'Git' Links to Your Web Based Assets |
givitiR | The GiViTI Calibration Test and Belt |
gjam | Generalized Joint Attribute Modeling |
GJRM | Generalised Joint Regression Modelling |
gk | g-and-k and g-and-h Distribution Functions |
GK2011 | Gaines and Kuklinski (2011) Estimators for Hybrid Experiments |
gkgraphR | Accessing the Official 'Google Knowledge Graph' API |
gkmSVM | Gapped-Kmer Support Vector Machine |
glacierSMBM | Glacier Surface Mass Balance Model |
glamlasso | Penalization in Large Scale Generalized Linear Array Models |
glancedata | Generate tables and plots to get summaries of data |
glarma | Generalized Linear Autoregressive Moving Average Models |
glassdoor | Interface to 'Glassdoor' API |
glasso | Graphical Lasso: Estimation of Gaussian Graphical Models |
glassoFast | Fast Graphical LASSO |
glba | General Linear Ballistic Accumulator Models |
glca | Latent Class Analysis with Grouped Data |
glcm | Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) |
gld | Estimation and Use of the Generalised (Tukey) Lambda Distribution |
GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods |
GLDreg | Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data |
gldrm | Generalized Linear Density Ratio Models |
GLIDE | Global and Individual Tests for Direct Effects |
glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |
gllm | Generalised log-Linear Model |
gllvm | Generalized Linear Latent Variable Models |
glm.deploy | 'C' and 'Java' Source Code Generator for Fitted Glm Objects |
glm.predict | Predicted Values and Discrete Changes for GLM |
glm2 | Fitting Generalized Linear Models |
glmaag | Adaptive LASSO and Network Regularized Generalized Linear Models |
GLMaSPU | An Adaptive Test on High Dimensional Parameters in Generalized Linear Models |
glmBfp | Bayesian Fractional Polynomials for GLMs |
glmc | Fitting Generalized Linear Models Subject to Constraints |
glmdisc | Discretization and Grouping for Logistic Regression |
glmdm | R Code for Simulation of GLMDM |
glmertree | Generalized Linear Mixed Model Trees |
glmglrt | GLRT P-Values in Generalized Linear Models |
glmgraph | Graph-Constrained Regularization for Sparse Generalized Linear Models |
glmlep | Fit GLM with LEP-Based Penalized Maximum Likelihood |
glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |
GLMMadaptive | Generalized Linear Mixed Models using Adaptive Gaussian Quadrature |
glmmboot | Bootstrap Resampling for Mixed Effects and Plain Models |
glmmEP | Generalized Linear Mixed Model Analysis via Expectation Propagation |
glmmfields | Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling |
glmmLasso | Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation |
glmmML | Generalized Linear Models with Clustering |
GLMMRR | Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data |
glmmsr | Fit a Generalized Linear Mixed Model |
glmmTMB | Generalized Linear Mixed Models using Template Model Builder |
glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |
glmnetcr | Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response |
glmnetUtils | Utilities for 'Glmnet' |
GLMpack | Data and Code to Accompany Generalized Linear Models, 2nd Edition |
glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |
glmpathcr | Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response |
glmpca | Dimension Reduction of Non-Normally Distributed Data |
GLMsData | Generalized Linear Model Data Sets |
GlmSimulatoR | Creates Ideal Data for Generalized Linear Models |
glmtlp | Truncated Lasso Regularized Generalized Linear Models |
glmtree | Logistic Regression Trees |
glmulti | Model Selection and Multimodel Inference Made Easy |
glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |
glmx | Generalized Linear Models Extended |
globalboosttest | Testing the additional predictive value of high-dimensional data |
GlobalDeviance | Global Deviance Permutation Tests |
GlobalFit | Bi-Level Optimization of Metabolic Network Models |
globalGSA | Global Gene-Set Analysis for Association Studies |
GlobalOptions | Generate Functions to Get or Set Global Options |
globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |
globals | Identify Global Objects in R Expressions |
globe | Plot 2D and 3D Views of the Earth, Including Major Coastline |
glogis | Fitting and Testing Generalized Logistic Distributions |
glpkAPI | R Interface to C API of GLPK |
glrt | Generalized Logrank Tests for Interval-censored Failure Time Data |
gLRTH | Genome-Wide Association and Linkage Analysis under Heterogeneity |
GLSME | Generalized Least Squares with Measurement Error |
glue | Interpreted String Literals |
gluedown | Wrap Vectors in Markdown Formatting |
gluvarpro | Glucose Variability Measures from Continuous Glucose Monitoring Data |
gma | Granger Mediation Analysis |
GMAC | Genomic Mediation Analysis with Adaptive Confounding Adjustment |
gmailr | Access the 'Gmail' 'RESTful' API |
GmAMisc | 'Gianmarco Alberti' Miscellaneous |
gmapsdistance | Distance and Travel Time Between Two Points from Google Maps |
gmat | Simulation of Graphical Correlation Matrices |
GMCM | Fast Estimation of Gaussian Mixture Copula Models |
gMCP | Graph Based Multiple Comparison Procedures |
gmDatabase | Accessing a Geometallurgical Database with R |
GMDH | Short Term Forecasting via GMDH-Type Neural Network Algorithms |
GMDH2 | Binary Classification via GMDH-Type Neural Network Algorithms |
GMDHreg | Regression using GMDH Algorithms |
Gmedian | Geometric Median, k-Median Clustering and Robust Median PCA |
gmfd | Inference and Clustering of Functional Data |
Gmisc | Descriptive Statistics, Transition Plots, and More |
GMKMcharlie | Unsupervised Gaussian Mixture and Minkowski K-Means |
gmm | Generalized Method of Moments and Generalized Empirical Likelihood |
GMMAT | Generalized Linear Mixed Model Association Tests |
GMMBoost | Likelihood-Based Boosting for Generalized Mixed Models |
gmnl | Multinomial Logit Models with Random Parameters |
gmodels | Various R Programming Tools for Model Fitting |
gMOIP | Tools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models |
gmp | Multiple Precision Arithmetic |
GMPro | Graph Matching with Degree Profiles |
gms | 'GAMS' Modularization Support Package |
GMSE | Generalised Management Strategy Evaluation Simulator |
GMSimpute | Generalized Mass Spectrum Missing Peaks Abundance Imputation |
gmt | Interface Between GMT Map-Making Software and R |
gmvarkit | Estimate Gaussian Mixture Vector Autoregressive Model |
gMWT | Generalized Mann-Whitney Type Tests |
GNAR | Methods for Fitting Network Time Series Models |
GNE | Computation of Generalized Nash Equilibria |
gnFit | Goodness of Fit Test for Continuous Distribution Functions |
gnlm | Generalized Nonlinear Regression Models |
gnm | Generalized Nonlinear Models |
gnn | Generative Neural Networks |
gnorm | Generalized Normal/Exponential Power Distribution |
GNRS | Access the 'Geographic Name Resolution Service' |
GNSSseg | Homogenization of GNSS Series |
gnumeric | Read Data from Files Readable by 'gnumeric' |
goeveg | Functions for Community Data and Ordinations |
gof | Model Diagnostics Based on Cumulative Residuals |
gofastr | Fast DocumentTermMatrix and TermDocumentMatrix Creation |
gofCopula | Goodness-of-Fit Tests for Copulae |
goffda | Goodness-of-Fit Tests for Functional Data |
gofgamma | Goodness-of-Fit Tests for the Gamma Distribution |
GoFKernel | Testing Goodness-of-Fit with the Kernel Density Estimator |
GofKmt | Khmaladze Martingale Transformation Goodness-of-Fit Test |
GOFShiny | Interactive Document for Working with Goodness of Fit Analysis |
goft | Tests of Fit for some Probability Distributions |
goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |
GOGANPA | GO-Functional-Network-based Gene-Set-Analysis |
gogarch | Generalized Orthogonal GARCH (GO-GARCH) models |
goldi | Gene Ontology Label Discernment and Identification |
golem | A Framework for Robust Shiny Applications |
gomms | GLM-Based Ordination Method |
GomoGomonoMi | Animate Text using the 'Animate.css' Library |
GoodmanKruskal | Association Analysis for Categorical Variables |
goodpractice | Advice on R Package Building |
googleAnalyticsR | Google Analytics API into R |
googleAuthR | Authenticate and Create Google APIs |
googleCloudRunner | R Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler |
googleCloudStorageR | Interface with Google Cloud Storage API |
googleCloudVisionR | Access to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling |
googleComputeEngineR | R Interface with Google Compute Engine |
googledrive | An Interface to Google Drive |
googleformr | Collect Data Programmatically by POST Methods to Google Forms |
GoogleKnowledgeGraphR | Retrieve Information from 'Google Knowledge Graph' API |
googleLanguageR | Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API |
googlenlp | An Interface to Google's Cloud Natural Language API |
googlePolylines | Encoding Coordinates into 'Google' Polylines |
googlePrintr | Connect to 'Google Cloud Print' API |
googlePublicData | Working with Google's 'Public Data Explorer' DSPL Metadata Files |
googler | Google from the R Console |
googlesheets | Manage Google Spreadsheets from R |
googlesheets4 | Access Google Sheets using the Sheets API V4 |
googleVis | R Interface to Google Charts |
googleway | Accesses Google Maps APIs to Retrieve Data and Plot Maps |
GOplot | Visualization of Functional Analysis Data |
GORCure | Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data |
goric | Generalized Order-Restricted Information Criterion |
gorica | Evaluation of Inequality Constrained Hypotheses Using GORICA |
gotop | Scroll Back to Top Icon in R Markdown and Shiny |
govdown | GOV.UK Style Templates for R Markdown |
govStatJPN | functions to get public survey data in Japan |
gower | Gower's Distance |
gpairs | The Generalized Pairs Plot |
GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |
GPArotation | GPA Factor Rotation |
gPCA | Batch Effect Detection via Guided Principal Components Analysis |
gpclib | General Polygon Clipping Library for R |
GPCMlasso | Differential Item Functioning in Generalized Partial Credit Models |
GPCSIV | GPCSIV, Generalized Principal Component of Symbolic Interval variables |
gPdtest | Bootstrap goodness-of-fit test for the generalized Pareto distribution |
GPFDA | Apply Gaussian Process in Functional data analysis |
GPfit | Gaussian Processes Modeling |
gpg | GNU Privacy Guard for R |
GPGame | Solving Complex Game Problems using Gaussian Processes |
GpGp | Fast Gaussian Process Computation Using Vecchia's Approximation |
gpindex | Generalized Price and Quantity Indexes |
gpk | 100 Data Sets for Statistics Education |
GPL2025 | Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID |
gplm | Generalized Partial Linear Models (GPLM) |
gplots | Various R Programming Tools for Plotting Data |
GPLTR | Generalized Partially Linear Tree-Based Regression Model |
GPM | Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets |
gpmap | Analysing and plotting genotype-phenotype maps |
GPoM | Generalized Polynomial Modelling |
GPoM.FDLyapu | Lyapunov Exponents and Kaplan-Yorke Dimension |
gppm | Gaussian Process Panel Modeling |
GPrank | Gaussian Process Ranking of Multiple Time Series |
GPRMortality | Gaussian Process Regression for Mortality Rates |
gProfileR | Interface to the 'g:Profiler' Toolkit |
gprofiler2 | Interface to the 'g:Profiler' Toolset |
GPSCDF | Generalized Propensity Score Cumulative Distribution Function |
GPSeqClus | Sequential Clustering Algorithm for Location Data |
gptk | Gaussian Processes Tool-Kit |
GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |
GPvecchia | Scalable Gaussian-Process Approximations |
gqlr | 'GraphQL' Server in R |
gquad | Prediction of G Quadruplexes and Other Non-B DNA Motifs |
grabsampling | Probability of Detection for Grab Sample Selection |
Grace | Graph-Constrained Estimation and Hypothesis Tests |
gradDescent | Gradient Descent for Regression Tasks |
grade | Binary Grading functions for R |
gradeR | Helps Grade Assignment Submissions that are R Scripts |
gradientPickerD3 | Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker' |
gRain | Graphical Independence Networks |
grainscape | Landscape Connectivity, Habitat, and Protected Area Networks |
gramEvol | Grammatical Evolution for R |
GRANBase | Creating Continuously Integrated Package Repositories from Manifests |
GRANCore | Classes and Methods for 'GRANBase' |
grangers | Inference on Granger-Causality in the Frequency Domain |
granova | Graphical Analysis of Variance |
granovaGG | Graphical Analysis of Variance Using ggplot2 |
GRAPE | Gene-Ranking Analysis of Pathway Expression |
grapes | Make Binary Operators |
gRapfa | Acyclic Probabilistic Finite Automata |
graph4lg | Build Graphs for Landscape Genetics Analysis |
GrapheR | A Multi-Platform GUI for Drawing Customizable Graphs in R |
grapherator | A Modular Multi-Step Graph Generator |
graphframes | Interface for 'GraphFrames' |
graphicalExtremes | Statistical Methodology for Graphical Extreme Value Models |
graphicalVAR | Graphical VAR for Experience Sampling Data |
graphkernels | Graph Kernels |
graphlayouts | Additional Layout Algorithms for Network Visualizations |
graphon | A Collection of Graphon Estimation Methods |
GraphPCA | Graphical Tools of Histogram PCA |
graphql | A GraphQL Query Parser |
graphscan | Cluster Detection with Hypothesis Free Scan Statistic |
graphsim | Simulate Expression Data from 'igraph' Networks |
graphTweets | Visualise Twitter Interactions |
GrassmannOptim | Grassmann Manifold Optimization |
gratia | Graceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv' |
graticule | Meridional and Parallel Lines for Maps |
gratis | Generating Time Series with Diverse and Controllable Characteristics |
grattan | Australian Tax Policy Analysis |
gravitas | Explore Probability Distributions for Bivariate Temporal Granularities |
gravity | Estimation Methods for Gravity Models |
gRbase | A Package for Graphical Modelling in R |
gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |
GRCdata | Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data |
grec | Gradient-Based Recognition of Spatial Patterns in Environmental Data |
GreedyEPL | Greedy Expected Posterior Loss |
GreedyExperimentalDesign | Greedy Experimental Design Construction |
GreedyExperimentalDesignJARs | GreedyExperimentalDesign JARs |
GreedySBTM | Greedy Stochastic Block Transition Models |
greekLetters | Routines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui' |
greenclust | Combine Categories Using Greenacre's Method |
Greg | Regression Helper Functions |
gremlin | Mixed-Effects REML Incorporating Generalized Inverses |
gren | Adaptive Group-Regularized Logistic Elastic Net Regression |
greport | Graphical Reporting for Clinical Trials |
greta | Simple and Scalable Statistical Modelling in R |
gretel | Generalized Path Analysis for Social Networks |
gretlR | Knit-Engine for 'Gretl' |
grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data |
greybox | Toolbox for Model Building and Forecasting |
greyzoneSurv | Fit a Grey-Zone Model with Survival Data |
grf | Generalized Random Forests |
gridBase | Integration of base and grid graphics |
gridBezier | Bezier Curves in 'grid' |
gridDebug | Debugging 'grid' Graphics |
gridExtra | Miscellaneous Functions for "Grid" Graphics |
gridGeometry | Polygon Geometry in 'grid' |
gridGraphics | Redraw Base Graphics Using 'grid' Graphics |
gridGraphviz | Drawing Graphs with 'grid' |
GridOnClusters | Joint Discretization of Data on a Grid that Preserves Clusters |
gridsampler | A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies |
gridSVG | Export 'grid' Graphics as SVG |
gridtext | Improved Text Rendering Support for 'Grid' Graphics |
GriegSmith | Uses Grieg-Smith method on 2 dimentional spatial data |
gRim | Graphical Interaction Models |
grImport | Importing Vector Graphics |
grImport2 | Importing 'SVG' Graphics |
GrimR | Calculate Optical Parameters from Spindle Stage Measurements |
gripp | General Inverse Problem Platform |
grizbayr | Bayesian Inference for A|B and Bandit Marketing Tests |
grnn | General regression neural network |
GROAN | Genomic Regression Workbench |
grobblR | Creating Flexible, Reproducible 'PDF' Reports |
groc | Generalized Regression on Orthogonal Components |
gromovlab | Gromov-Hausdorff Type Distances for Labeled Metric Spaces |
GroupBN | Learn Group Bayesian Networks using Hierarchical Clustering |
GroupComparisons | Paired/Unpaired Parametric/Non-Parametric Group Comparisons |
groupdata2 | Creating Groups from Data |
grouped | Regression Analysis of Grouped and Coarse Data |
groupedstats | Grouped Statistical Analyses in a Tidy Way |
groupedSurv | Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function |
groupICA | Independent Component Analysis for Grouped Data |
groupRemMap | Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty |
GroupSeq | A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs |
groupsubsetselection | Group Subset Selection |
GroupTest | Multiple Testing Procedure for Grouped Hypotheses |
groupWQS | Grouped Weighted Quantile Sum Regression |
grove | Wavelet Functional ANOVA Through Markov Groves |
growfunctions | Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data |
growth | Multivariate Normal and Elliptically-Contoured Repeated Measurements Models |
growthmodels | Nonlinear Growth Models |
growthPheno | Plotting, Smoothing and Growth Trait Extraction for Longitudinal Data |
growthrate | Bayesian reconstruction of growth velocity |
growthrates | Estimate Growth Rates from Experimental Data |
grplasso | Fitting User-Specified Models with Group Lasso Penalty |
grplassocat | Standardization for Group Lasso Models with Categorical Predictors |
grpreg | Regularization Paths for Regression Models with Grouped Covariates |
grpSLOPE | Group Sorted L1 Penalized Estimation |
GrpString | Patterns and Statistical Differences Between Two Groups of Strings |
GRPtests | Goodness-of-Fit Tests in High-Dimensional GLMs |
grr | Alternative Implementations of Base R Functions |
GRS.test | GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation |
grt | General Recognition Theory |
GRTo | Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes |
GSA | Gene Set Analysis |
GSA.UN | Global Sensitivity Analysis Tool |
GSAfisherCombined | Gene Set Analysis with Fisher Combined Method |
GSAgm | Gene Set Analysis using the Gamma Method |
gsalib | Utility Functions For GATK |
GSAQ | Gene Set Analysis with QTL |
gsarima | Two functions for Generalized SARIMA time series simulation |
gsbDesign | Group Sequential Bayes Design |
gsbm | Estimate Parameters in the Generalized SBM |
gscaLCA | Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression |
gscounts | Group Sequential Designs with Negative Binomial Outcomes |
gsDesign | Group Sequential Design |
GSE | Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data |
gsEasy | Gene Set Enrichment Analysis in R |
GSED | Group Sequential Enrichment Design |
gSeg | Graph-Based Change-Point Detection (g-Segmentation) |
GSelection | Genomic Selection |
gSEM | Semi-Supervised Generalized Structural Equation Modeling |
gset | Group Sequential Design in Equivalence Studies |
gsheet | Download Google Sheets Using Just the URL |
GSIF | Global Soil Information Facilities |
gskat | GEE_KM |
gsl | Wrapper for the Gnu Scientific Library |
gsloid | Global Sea Level and Oxygen Isotope Data |
GSM | Gamma Shape Mixture |
gsmoothr | Smoothing tools |
GSMX | Multivariate Genomic Selection |
GSODR | Global Surface Summary of the Day ('GSOD') Weather Data Client |
GSparO | Group Sparse Optimization |
gsrsb | Group Sequential Refined Secondary Boundary |
gss | General Smoothing Splines |
GSSE | Genotype-Specific Survival Estimation |
gstar | Generalized Space-Time Autoregressive Model |
gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |
gStream | Graph-Based Sequential Change-Point Detection for Streaming Data |
gsubfn | Utilities for Strings and Function Arguments |
gsw | Gibbs Sea Water Functions |
GsymPoint | Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests |
gsynth | Generalized Synthetic Control Method |
gt | Easily Create Presentation-Ready Display Tables |
gt4ireval | Generalizability Theory for Information Retrieval Evaluation |
gtable | Arrange 'Grobs' in Tables |
gtcorr | Calculate efficiencies of group testing algorithms with correlated responses |
gte | Generalized Turnbull's Estimator |
gTests | Graph-Based Two-Sample Tests |
gtfs2gps | Converting Transport Data from GTFS Format to GPS-Like Records |
gtfsrouter | Routing with GTFS (General Transit Feed Specification) Data |
gtheory | Apply Generalizability Theory with R |
gtools | Various R Programming Tools |
gtop | Game-Theoretically OPtimal (GTOP) Reconciliation Method |
gtrendsR | Perform and Display Google Trends Queries |
gtsummary | Presentation-Ready Data Summary and Analytic Result Tables |
gtWAS | Genome and Transcriptome Wide Association Study |
guaguas | Nombres Inscritos en Chile (1920 - 2019) |
guardianapi | Access 'The Guardian' Newspaper Open Data API |
GuardianR | The Guardian API Wrapper |
Guerry | Maps, Data and Methods Related to Guerry (1833) "Moral Statistics of France" |
guess | Adjust Estimates of Learning for Guessing |
GuessCompx | Empirically Estimates Algorithm Complexity |
guf | Generally Useful Functions |
GUIDE | GUI for DErivatives in R |
GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |
guiplot | User-Friendly GUI Plotting Tools |
GUIProfiler | Graphical User Interface for Rprof() |
gumbel | The Gumbel-Hougaard Copula |
GUniFrac | Generalized UniFrac Distances |
gunit | Converts Conductance Units |
gunsales | Statistical Analysis of Monthly Background Checks of Gun Purchases |
gustave | A User-Oriented Statistical Toolkit for Analytical Variance Estimation |
gutenbergr | Download and Process Public Domain Works from Project Gutenberg |
GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |
GVARX | Perform Global Vector Autoregression Estimation and Inference |
gvc | Global Value Chains Tools |
gvcm.cat | Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs |
gvcR | Genotypic Variance Components |
gvlma | Global Validation of Linear Models Assumptions |
GWASbyCluster | Identifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering |
GWASExactHW | Exact Hardy-Weinburg testing for Genome Wide Association Studies |
GWASinlps | Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies |
GWASinspector | Comprehensive and Easy to Use Quality Control of GWAS Results |
gwdegree | A Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models |
gwer | Geographically Weighted Elliptical Regression |
gwerAM | Controlling the genome-wide type I error rate in association mapping experiments |
GWEX | Multi-Site Stochastic Models for Daily Precipitation and Temperature |
gwfa | Geographically Weighted Fractal Analysis |
GWG | Calculation of probabilities for inadequate and excessive gestational weight gain |
gWidgets2 | Rewrite of gWidgets API for Simplified GUI Construction |
gWidgets2RGtk2 | Implementation of gWidgets2 for the RGtk2 Package |
gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |
GWLelast | Geographically Weighted Logistic Elastic Net Regression |
GWmodel | Geographically-Weighted Models |
GWnnegPCA | Geographically Weighted Non-Negative Principal Components Analysis |
GWpcor | Geographically Weighted Partial Correlation Coefficient |
gWQS | Generalized Weighted Quantile Sum Regression |
GWRM | Generalized Waring Regression Model for Count Data |
gwrpvr | Genome-Wide Regression P-Value (Gwrpv) |
gwrr | Fits geographically weighted regression models with diagnostic tools |
GWSDAT | GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) |
gwsem | Genome-Wide Structural Equation Modeling |
GWsignif | Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests |
GxM | Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models |
gym | Provides Access to the OpenAI Gym API |
h2o | R Interface for the 'H2O' Scalable Machine Learning Platform |
h2o4gpu | Interface to 'H2O4GPU' |
haarfisz | Software to perform Haar Fisz transforms |
hablar | Non-Astonishing Results in R |
HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |
hackeRnews | Wrapper for the 'Official Hacker News' API |
hacksaw | Additional Tools for Splitting and Cleaning Data |
HACSim | Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment |
HadamardR | Hadamard Matrix Generation |
HaDeX | Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data |
HadoopStreaming | Utilities for using R scripts in Hadoop streaming |
hadron | Analysis Framework for Monte Carlo Simulation Data in Physics |
hagis | Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity |
hail | Read HYDRA Rainfall Data |
hal9001 | The Scalable Highly Adaptive Lasso |
haldensify | Highly Adaptive Lasso Conditional Density Estimation |
halfcircle | Plot Halfcircle Diagram |
hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |
handlr | Convert Among Citation Formats |
HandTill2001 | Multiple Class Area under ROC Curve |
handyplots | Handy Plots |
hans | Haversines are not Slow |
hansard | Provides Easy Downloading Capabilities for the UK Parliament API |
hapassoc | Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |
Hapi | Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells |
HAPim | HapIM |
Haplin | Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |
haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |
haploR | Query 'HaploReg', 'RegulomeDB' |
haploReconstruct | Reconstruction of Haplotype-Blocks from Time Series Data |
HaploSim | Functions to simulate haplotypes |
haplotyper | Tool for Clustering Genotypes in Haplotypes |
haplotypes | Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony |
happybiRthday | Calculate Upcoming Birthday Dates of Github Repos |
happytime | Two Games to Relieve the Boredom |
hapsim | Haplotype Data Simulation |
hardhat | Construct Modeling Packages |
HardyWeinberg | Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |
HARModel | Heterogeneous Autoregressive Models |
harmonicmeanp | Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood |
HarmonicRegression | Harmonic Regression to One or more Time Series |
harrietr | Wrangle Phylogenetic Distance Matrices and Other Utilities |
harrypotter | Palettes Generated from All "Harry Potter" Movies |
HARtools | Read HTTP Archive ('HAR') Data |
Harvest.Tree | Harvest the Classification Tree |
hash | Full Feature Implementation of Hash/Associated Arrays/Dictionaries |
hashFunction | A collection of non-cryptographic hash functions |
hashids | Generate Short Unique YouTube-Like IDs (Hashes) from Integers |
hashr | Hash R Objects to Integers Fast |
hasseDiagram | Drawing Hasse Diagram |
haven | Import and Export 'SPSS', 'Stata' and 'SAS' Files |
hawkes | Hawkes process simulation and calibration toolkit |
hazer | Identifying Foggy and Cloudy Images by Quantifying Haziness |
hazus | Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters |
hBayesDM | Hierarchical Bayesian Modeling of Decision-Making Tasks |
hbbr | Hierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment |
HBglm | Hierarchical Bayesian Regression for GLMs |
hbim | Hill/Bliss Independence Model for Combination Vaccines |
hbm | Hierarchical Block Matrix Analysis |
hbmem | Hierarchical Bayesian Analysis of Recognition Memory |
hbsae | Hierarchical Bayesian Small Area Estimation |
HBSTM | Hierarchical Bayesian Space-Time models for Gaussian space-time data |
HBV.IANIGLA | Decoupled Hydrological Model for Research and Education Purposes |
hcandersenr | H.C. Andersens Fairy Tales |
hcc | Hidden correlation check |
hcci | Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |
HCD | Hierarchical Community Detection by Recursive Partitioning |
hchinamap | Mapping China and Its Provinces |
HCmodelSets | Regression with a Large Number of Potential Explanatory Variables |
hcp | Change Point Estimation for Regression with Heteroscedastic Data |
HCR | Causal Discovery from Discrete Data using Hidden Compact Representation |
HCT | Calculates Significance Criteria and Power for a Single Arm Trial |
HCTR | Higher Criticism Tuned Regression |
hctrial | Using Historical Controls for Designing Phase II Clinical Trials |
hda | Heteroscedastic Discriminant Analysis |
hdbinseg | Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation |
hdbm | High Dimensional Bayesian Mediation Analysis |
HDCI | High Dimensional Confidence Interval Based on Lasso and Bootstrap |
HDclassif | High Dimensional Supervised Classification and Clustering |
HDclust | Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks |
HDcpDetect | Detect Change Points in Means of High Dimensional Data |
HDCurves | Hierarchical Derivative Curve Estimation |
hdd | Easy Manipulation of Out of Memory Data Sets |
HDDesign | Sample Size Calculation for High Dimensional Classification Study |
hddplot | Use Known Groups in High-Dimensional Data to Derive Scores for Plots |
hddtools | Hydrological Data Discovery Tools |
hdf5r | Interface to the 'HDF5' Binary Data Format |
hdfqlr | Interface to 'HDFql' API |
HDGLM | Tests for High Dimensional Generalized Linear Models |
hdi | High-Dimensional Inference |
HDInterval | Highest (Posterior) Density Intervals |
hdlm | Fitting High Dimensional Linear Models |
HDLSSkST | Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests |
hdm | High-Dimensional Metrics |
HDMD | Statistical Analysis Tools for High Dimension Molecular Data (HDMD) |
hdme | High-Dimensional Regression with Measurement Error |
HDMT | A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses |
hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models |
HDoutliers | Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |
hdpca | Principal Component Analysis in High-Dimensional Data |
HDPenReg | High-Dimensional Penalized Regression |
hdrcde | Highest Density Regions and Conditional Density Estimation |
hds | Hazard Discrimination Summary |
HDtest | High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series |
HDtweedie | The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |
healthcareai | Tools for Healthcare Machine Learning |
healthforum | Scrape Patient Forum Data |
heatex | Heat exchange calculations during physical activity |
heatmap.plus | Heatmap with more sensible behavior |
heatmap3 | An Improved Heatmap Package |
heatmapFit | Fit Statistic for Binary Dependent Variable Models |
heatmaply | Interactive Cluster Heat Maps Using 'plotly' |
heatwaveR | Detect Heatwaves and Cold-Spells |
heavy | Robust Estimation Using Heavy-Tailed Distributions |
heddlr | Dynamic R Markdown Document Generation |
hedgehog | Property-Based Testing |
heemod | Markov Models for Health Economic Evaluations |
heims | Decode and Validate HEIMS Data from Department of Education, Australia |
helda | Preprocess Data and Get Better Insights from Machine Learning Models |
helixvis | Visualize Alpha-Helical Peptide Sequences |
HellCor | The Hellinger Correlation |
hellno | Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |
helloJavaWorld | Hello Java World |
helminthR | Access London Natural History Museum Host-Helminth Record Database |
HelpersMG | Tools for Environmental Analyses, Ecotoxicology and Various R Functions |
helsinki | R Tools for Helsinki Open Data |
HEMDAG | Hierarchical Ensemble Methods for Directed Acyclic Graphs |
heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |
here | A Simpler Way to Find Your Files |
hereR | 'sf'-Based Interface to the 'HERE' REST APIs |
heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |
heritEWAS | Identify Heritable Methylation Marks |
HeritSeq | Heritability of Gene Expression for Next-Generation Sequencing |
hermite | Generalized Hermite Distribution |
hero | Spatio-Temporal (Hero) Sandwich Smoother |
hesim | Health-Economic Simulation Modeling and Decision Analysis |
het.test | White's Test for Heteroskedasticity |
hetGP | Heteroskedastic Gaussian Process Modeling and Design under Replication |
HETOP | MLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model |
hett | Heteroscedastic t-Regression |
hettreatreg | Heterogeneous Treatment Effects in Regression Analysis |
hettx | Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation |
heuristica | Heuristics Including Take the Best and Unit-Weight Linear |
heuristicsmineR | Discovery of Process Models with the Heuristics Miner |
hexbin | Hexagonal Binning Routines |
hexSticker | Create Hexagon Sticker in R |
HextractoR | Integrated Tool for Hairping Extraction of RNA Sequences |
hextri | Hexbin Plots with Triangles |
hexView | Viewing Binary Files |
hflights | Flights that departed Houston in 2011 |
hglasso | Learning graphical models with hubs |
hglm | Hierarchical Generalized Linear Models |
hglm.data | Data for the 'hglm' Package |
hgm | Holonomic Gradient Method and Gradient Descent |
HGNChelper | Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols |
HGSL | Heterogeneous Group Square-Root Lasso |
hgutils | Collection of Utility Functions |
HH | Statistical Analysis and Data Display: Heiberger and Holland |
HHG | Heller-Heller-Gorfine Tests of Independence and Equality of Distributions |
hhh4contacts | Age-Structured Spatio-Temporal Models for Infectious Disease Counts |
hhi | Calculate and Visualize the Herfindahl-Hirschman Index |
hht | The Hilbert-Huang Transform: Tools and Methods |
HI | Simulation from distributions supported by nested hyperplanes |
HiCfeat | Multiple Logistic Regression for 3D Chromatin Domain Border Analysis |
HiClimR | Hierarchical Climate Regionalization |
HiCseg | Detection of domains in HiC data |
hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |
HiddenMarkov | Hidden Markov Models |
HiDimDA | High Dimensional Discriminant Analysis |
hier.part | Hierarchical Partitioning |
hierarchicalDS | Functions to Perform Hierarchical Analysis of Distance Sampling Data |
hierarchicalSets | Set Data Visualization Using Hierarchies |
hierband | Convex Banding of the Covariance Matrix |
hierDiversity | Hierarchical Multiplicative Partitioning of Complex Phenotypes |
HierDpart | Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems |
hierfstat | Estimation and Tests of Hierarchical F-Statistics |
hierNet | A Lasso for Hierarchical Interactions |
HierO | A graphical user interface for calculating power and sample size for hierarchical data |
hiertest | Convex Hierarchical Testing of Interactions |
HIest | Hybrid index estimation |
highcharter | A Wrapper for the 'Highcharts' Library |
highD2pop | Two-Sample Tests for Equality of Means in High Dimension |
HighDimOut | Outlier Detection Algorithms for High-Dimensional Data |
highDmean | Testing Two-Sample Mean in High Dimension |
HighestMedianRules | Implementation of Voting Rules Electing the Candidate with Highest Median Grade |
highfrequency | Tools for Highfrequency Data Analysis |
highlight | Syntax Highlighter |
highlightHTML | Highlight HTML Text and Tables |
highmean | Two-Sample Tests for High-Dimensional Mean Vectors |
highr | Syntax Highlighting for R Source Code |
highriskzone | Determining and Evaluating High-Risk Zones |
highSCREEN | High-Throughput Screening for Plate Based Assays |
highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |
higlasso | Hierarchical Integrative Group LASSO |
higrad | Statistical Inference for Online Learning and Stochastic Approximation via HiGrad |
hilbertSimilarity | Hilbert Similarity Index for High Dimensional Data |
hildareadR | Extract Variables from HILDA |
hilldiv | Integral Analysis of Diversity Based on Hill Numbers |
hillmakeR | Perform occupancy analysis |
hillR | Diversity Through Hill Numbers |
HiLMM | Estimation of Heritability in Linear Mixed Models |
HIMA | High-Dimensional Mediation Analysis |
hindex | Simulating the Development of h-Index Values |
hindexcalculator | H-Index Calculator using Data from a Web of Science (WoS) Citation Report |
hint | Tools for hypothesis testing based on Hypergeometric Intersection distributions |
hiPOD | hierarchical Pooled Optimal Design |
hipread | Read Hierarchical Fixed Width Files |
HiResTEC | Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data |
hIRT | Hierarchical Item Response Theory Models |
hisse | Hidden State Speciation and Extinction |
HistData | Data Sets from the History of Statistics and Data Visualization |
HistDAWass | Histogram-Valued Data Analysis |
histmdl | A Most Informative Histogram-Like Model |
histogram | Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins |
HistogramTools | Utility Functions for R Histograms |
historydata | Data Sets for Historians |
histry | Enhanced Command History Tracking for R Sessions and Dynamic Documents |
hit | Hierarchical Inference Testing |
hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |
HIV.LifeTables | HIV calibrated model life tables for countries with generalized HIV epidemics |
hive | Hadoop InteractiVE |
HiveR | 2D and 3D Hive Plots for R |
hJAM | Hierarchical Joint Analysis of Marginal Summary Statistics |
HK80 | Conversion Tools for HK80 Geographical Coordinate System |
hkclustering | Ensemble Clustering using K Means and Hierarchical Clustering |
hkevp | Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |
hkex.api | API to Retrieve Data from Hong Kong Stock Exchange |
HKprocess | Hurst-Kolmogorov Process |
HLMdiag | Diagnostic Tools for Hierarchical (Multilevel) Linear Models |
HLSM | Hierarchical Latent Space Network Model |
HMB | Hierarchical Model-Based Estimation Approach |
hmclearn | Fit Statistical Models Using Hamiltonian Monte Carlo |
HMDHFDplus | Read Human Mortality Database and Human Fertility Database Data from the Web |
hmeasure | The H-Measure and Other Scalar Classification Performance Metrics |
hmgm | High-Dimensional Mixed Graphical Models Estimation |
hmi | Hierarchical Multiple Imputation |
Hmisc | Harrell Miscellaneous |
hmlasso | Lasso with High Missing Rate |
HMM | HMM - Hidden Markov Models |
hmm.discnp | Hidden Markov Models with Discrete Non-Parametric Observation Distributions |
hmma | Constructs Asymmetric Hidden Markov Models |
HMMCont | Hidden Markov Model for Continuous Observations Processes |
HMMcopula | Markov Regime Switching Copula Models Estimation and Goodness of Fit |
HMMEsolver | A Fast Solver for Henderson Mixed Model Equation via Row Operations |
HMMextra0s | Hidden Markov Models with Extra Zeros |
hmmm | Hierarchical Multinomial Marginal Models |
HMMmlselect | Determine the Number of States in Hidden Markov Models via Marginal Likelihood |
HMMpa | Analysing Accelerometer Data Using Hidden Markov Models |
HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |
HMPTrees | Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |
HMR | Flux Estimation with Static Chamber Data |
hms | Pretty Time of Day |
Hmsc | Hierarchical Model of Species Communities |
hmstimer | 'hms' Based Timer |
HMVD | Group Association Test using a Hidden Markov Model |
hNMF | Hierarchical Non-Negative Matrix Factorization |
hnp | Half-Normal Plots with Simulation Envelopes |
hoa | Higher Order Likelihood Inference |
hoardeR | Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices |
hoardr | Manage Cached Files |
holdem | Texas Holdem Simulator |
Holidays | Holiday and Half-Day Data, for Use with the 'TimeWarp' Package |
holodeck | A Tidy Interface for Simulating Multivariate Data |
homals | Gifi Methods for Optimal Scaling |
homeR | Useful Functions for Building Physics |
Homeric | Doughnut Plots |
hommel | Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method |
homologene | Quick Access to Homologene and Gene Annotation Updates |
homomorpheR | Homomorphic Computations in R |
homtest | Homogeneity tests for Regional Frequency Analysis |
hopbyhop | Transmissions and Receptions in a Hop by Hop Network |
hopit | Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity |
horizon | Horizon Search Algorithm |
HoRM | Supplemental Functions and Datasets for "Handbook of Regression Methods" |
hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |
horserule | Flexible Non-Linear Regression with the HorseRule Algorithm |
horseshoe | Implementation of the Horseshoe Prior |
hot.deck | Multiple Hot-Deck Imputation |
Hotelling | Hotelling's T^2 Test and Variants |
hotspot | Software Hotspot Analysis |
hotspots | Hot Spots |
housingData | U.S. Housing Data from 2008 to 2016 |
howmany | A lower bound for the number of correct rejections |
hpa | Distributions Hermite Polynomial Approximation |
hpackedbubble | Create Split Packed Bubble Charts |
HPbayes | Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling |
hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |
hpiR | House Price Indexes |
HPLB | High-Probability Lower Bounds for the Total Variance Distance |
hpoPlot | Functions for Plotting HPO Terms |
hqmisc | Miscellaneous convenience functions and dataset |
hqreg | Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |
hR | Toolkit for Data Analytics in Human Resources |
hrbrthemes | Additional Themes, Theme Components and Utilities for 'ggplot2' |
hrcomprisk | Nonparametric Assessment Between Competing Risks Hazard Ratios |
hrIPW | Hazard Ratio Estimation using Cox Model Weighted by the Estimated Propensity Score |
HRM | High-Dimensional Repeated Measures |
HRW | Datasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018) |
HS | Homogenous Segmentation for Spatial Lines Data |
HSAR | Hierarchical Spatial Autoregressive Model |
HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |
HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |
HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |
hscovar | Calculation of Covariance Between Markers for Half-Sib Families |
hsdar | Manage, Analyse and Simulate Hyperspectral Data |
HSDiC | Homogeneity and Sparsity Detection Incorporating Prior Constraint Information |
hSDM | Hierarchical Bayesian Species Distribution Models |
hsicCCA | Canonical Correlation Analysis based on Kernel Independence Measures |
hsm | A Path-Based BCD for Proximal Function of Latent Group Lasso |
hsmm | Hidden Semi Markov Models |
hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |
HSPOR | Hidden Smooth Polynomial Regression for Rupture Detection |
hsrecombi | Estimation of Recombination Rate and Maternal LD in Half-Sibs |
hsstan | Hierarchical Shrinkage Stan Models for Biomarker Selection |
HSSVD | Biclustering with Heterogeneous Variance |
htdp | Horizontal Time Dependent Positioning |
htestClust | Reweighted Marginal Hypothesis Tests for Clustered Data |
HTLR | Bayesian Logistic Regression with Heavy-Tailed Priors |
htm2txt | Convert Html into Text |
htmltab | Assemble Data Frames from HTML Tables |
htmlTable | Advanced Tables for Markdown/HTML |
htmltidy | Tidy Up and Test XPath Queries on HTML and XML Content |
htmltools | Tools for HTML |
HTMLUtils | Facilitates Automated HTML Report Creation |
htmlwidgets | HTML Widgets for R |
htree | Historical Tree Ensembles for Longitudinal Data |
hts | Hierarchical and Grouped Time Series |
HTSCluster | Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
HTSSIP | High Throughput Sequencing of Stable Isotope Probing Data Analysis |
httk | High-Throughput Toxicokinetics |
httpcache | Query Cache for HTTP Clients |
httpcode | 'HTTP' Status Code Helper |
httping | 'Ping' 'URLs' to Time 'Requests' |
httpRequest | Basic HTTP Request |
httptest | A Test Environment for HTTP Requests |
httpuv | HTTP and WebSocket Server Library |
httr | Tools for Working with URLs and HTTP |
hues | Distinct Colour Palettes Based on 'iwanthue' |
huge | High-Dimensional Undirected Graph Estimation |
HUM | compute HUM value and visualize ROC curves |
humanFormat | Human-friendly formatting functions |
humaniformat | A Parser for Human Names |
humanize | Create Values for Human Consumption |
humanleague | Synthetic Population Generator |
humidity | Calculate Water Vapor Measures from Temperature and Dew Point |
hunspell | High-Performance Stemmer, Tokenizer, and Spell Checker |
HURDAT | Hurricane Re-Analysis Project |
hurdlr | Zero-Inflated and Hurdle Modelling Using Bayesian Inference |
hurricaneexposure | Explore and Map County-Level Hurricane Exposure in the United States |
hutils | Miscellaneous R Functions and Aliases |
hutilscpp | Miscellaneous Functions in C++ |
huxtable | Easily Create and Style Tables for LaTeX, HTML and Other Formats |
HW.pval | Testing Hardy-Weinberg Equilibrium for Multiallelic Genes |
hwde | Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |
HWEBayes | Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing |
HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |
hwordcloud | Rendering Word Clouds |
hwriter | HTML Writer - Outputs R objects in HTML format |
hwwntest | Tests of White Noise using Wavelets |
hybridEnsemble | Build, Deploy and Evaluate Hybrid Ensembles |
HybridMC | Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques |
hybridModels | An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks |
HydeNet | Hybrid Bayesian Networks Using R and JAGS |
hydra | Hyperbolic Embedding |
hydraulics | Basic Pipe and Open Channel Hydraulics |
hydroApps | Tools and models for hydrological applications |
HydroCode | Hydrological Codes |
hydrogeo | Groundwater Data Presentation and Interpretation |
hydroGOF | Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series |
hydrolinks | Hydrologic Network Linking Data and Tools |
HydroMe | R codes for estimating water retention and infiltration model parameters using experimental data |
hydroPSO | Particle Swarm Optimisation, with Focus on Environmental Models |
hydroscoper | Interface to the Greek National Data Bank for Hydrometeorological Information |
hydrostats | Hydrologic Indices for Daily Time Series Data |
hydroToolkit | Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile |
hydroTSM | Time Series Management, Analysis and Interpolation for Hydrological Modelling |
hyfo | Hydrology and Climate Forecasting |
hyper.fit | Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter |
hyper2 | The Hyperdirichlet Distribution, Mark 2 |
HyperbolicDist | The hyperbolic distribution |
hypercube | Organizing Data in Hypercubes |
hypergate | Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry |
hypergea | Hypergeometric Tests |
hypergeo | The Gauss Hypergeometric Function |
HypergeoMat | Hypergeometric Function of a Matrix Argument |
hypersampleplan | Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials |
hyperSMURF | Hyper-Ensemble Smote Undersampled Random Forests |
hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |
hypervolume | High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls |
HyPhy | Macroevolutionary phylogentic analysis of species trees and gene trees |
hypothesestest | Confidence Intervals and Tests of Statistical Hypotheses |
hypothesisr | Wrapper for the 'Hypothes.is' Web Annotation Service |
hypr | Hypothesis Matrix Translation |
HyRiM | Multicriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions |
HYRISK | Hybrid Methods for Addressing Uncertainty in RISK Assessments |
hySpc.testthat | 'testthat' Unit Test Enhancements |
hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |
hystReet | Get Pedestrian Frequency Data from the 'Hystreet' Project |
hzar | Hybrid Zone Analysis using R |
i2dash | Iterative and Interactive Dashboards |
IAbin | Plotting N-T Plane for Decision on Performing an Interim Analysis |
iAdapt | Two-Stage Adaptive Dose-Finding Clinical Trial Design |
iadf | Analysis of Intra Annual Density Fluctuations |
iai | Interface to 'Interpretable AI' Modules |
IalsaSynthesis | Synthesizing Information Across Collaborating Research |
iarm | Item Analysis in Rasch Models |
IASD | Model Selection for Index of Asymmetry Distribution |
IAT | Cleaning and Visualizing Implicit Association Test (IAT) Data |
IATanalytics | Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data |
IATScore | Scoring Algorithm for the Implicit Association Test (IAT) |
IATscores | Implicit Association Test Scores Using Robust Statistics |
iBATCGH | Integrative Bayesian Analysis of Transcriptomic and CGH Data |
ibb | R Wrapper for Istanbul Municipality Open Data Portal |
IBCF.MTME | Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data |
ibd | Incomplete Block Designs |
IBDhaploRtools | Functions for the Analysis of IBD Haplo Output |
IBDLabels | Convert Between Different IBD-State Labelling Schemes |
ibdreg | Regression Methods for IBD Linkage with Covariates |
IBDsim | Simulation of Chromosomal Regions Shared by Family Members |
ibdsim2 | Simulation of Chromosomal Regions Shared by Family Members |
ibeemd | Irregular-lattice based ensemble empirical mode decomposition |
ibelief | Belief Function Implementation |
ibm | Individual Based Models in R |
ibmAcousticR | Connect to Your IBM 'Acoustic' Data with 'R' |
ibmcraftr | Toolkits to Develop Individual-Based Models in Infectious Disease |
ibmdbR | IBM in-Database Analytics for R |
ibmsunburst | Generate Personality Insights Sunburst Diagrams |
Iboot | Iboot: iterated bootstrap tests and confidence sets |
ibr | Iterative Bias Reduction |
iBreakDown | Model Agnostic Instance Level Variable Attributions |
IBrokers | R API to Interactive Brokers Trader Workstation |
ibs | Integral of B-Spline Functions |
iBST | Improper Bagging Survival Tree |
ic.infer | Inequality Constrained Inference in Linear Normal Situations |
iC10 | A Copy Number and Expression-Based Classifier for Breast Tumours |
iC10TrainingData | Training Datasets for iC10 Package |
IC2 | Inequality and Concentration Indices and Curves |
ic50 | Standardized high-throughput evaluation of cell-based compound screens |
ica | Independent Component Analysis |
ICAFF | Imperialist Competitive Algorithm |
ical | 'iCalendar' Parsing |
ICAMS | In-depth Characterization and Analysis of Mutational Signatures ('ICAMS') |
ICAOD | Optimal Designs for Linear and Nonlinear Models |
icapca | Mixed ICA/PCA |
iCARH | Integrative Conditional Autoregressive Horseshoe Model |
icarus | Calibrates and Reweights Units in Samples |
ICBayes | Bayesian Semiparametric Models for Interval-Censored Data |
ICC | Facilitating Estimation of the Intraclass Correlation Coefficient |
ICC.Sample.Size | Calculation of Sample Size and Power for ICC |
ICcalib | Cox Model with Interval-Censored Starting Time of a Covariate |
iccbeta | Multilevel Model Intraclass Correlation for Slope Heterogeneity |
ICCbin | Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data |
ICcforest | An Ensemble Method for Interval-Censored Survival Data |
icd | Comorbidity Calculations and Tools for ICD-9 and ICD-10 Codes |
icd.data | International Classifcation of Diseases (ICD) Data |
ICD10gm | Metadata Processing for the German Modification of the ICD-10 Coding System |
icdGLM | EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models |
ICDS | Identification of Cancer Dysfunctional Subpathway by Integrating DNA Methylation, Copy Number Variation, and Gene Expression Data |
ICE | Iterated Conditional Expectation |
ICEbox | Individual Conditional Expectation Plot Toolbox |
IceCast | Apply Statistical Post-Processing to Improve Sea Ice Predictions |
ICEinfer | Incremental Cost-Effectiveness Inference using Two Unbiased Samples |
iCellR | Analyzing High-Throughput Single Cell Sequencing Data |
icemelt | Parameter Estimation in Linear Transformation Model with Interval-Censored Data and Covariate Measurement Error |
icenReg | Regression Models for Interval Censored Data |
icensBKL | Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre |
icensmis | Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes |
icesAdvice | Functions Related to ICES Advice |
icesDatras | DATRAS Trawl Survey Database Web Services |
icesSAG | Stock Assessment Graphs Database Web Services |
icesTAF | Functions to Support the ICES Transparent Assessment Framework |
icesVocab | ICES Vocabularies Database Web Services |
ICGE | Estimation of number of clusters and identification of atypical units |
ICGOR | Fit Generalized Odds Rate Hazards Model with Interval Censored Data |
iCiteR | A Minimal Wrapper Around NIH's 'iCite' API |
iClick | A Button-Based GUI for Financial and Economic Data Analysis |
iCluster | Integrative clustering of multiple genomic data types |
icmm | Empirical Bayes Variable Selection via ICM/M Algorithm |
ICODS | Data Analysis for ODS and Case-Cohort Designs with Interval-Censoring |
ICON | Provides Easy Access to Complex Systems Datasets |
icosa | Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra |
icpsrdata | Reproducible Data Retrieval from the ICPSR Archive |
icr | Compute Krippendorff's Alpha |
ICRanks | Simultaneous Confidence Intervals for Ranks |
icrf | Interval Censored Recursive Forests |
icRSF | A Modified Random Survival Forest Algorithm |
ICS | Tools for Exploring Multivariate Data via ICS/ICA |
ICSNP | Tools for Multivariate Nonparametrics |
ICSOutlier | Outlier Detection Using Invariant Coordinate Selection |
ICSS | ICSS Algorithm by Inclan/Tiao (1994) |
ICSShiny | ICS via a Shiny Application |
ICsurv | A package for semiparametric regression analysis of interval-censored data |
icsw | Inverse Compliance Score Weighting |
ICtest | Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction |
ICV | Indirect Cross-Validation (ICV) for Kernel Density Estimation |
idar | Individual Diversity-Area Relationships |
idbg | R debugger |
idbr | R Interface to the US Census Bureau International Data Base API |
IDCard | Update Chinese ID Card Number to Eighteen Digits |
IDE | Integro-Difference Equation Spatio-Temporal Models |
ideamdb | Easy Manipulation of IDEAM's Climatological Data |
idefix | Efficient Designs for Discrete Choice Experiments |
idem | Inference in Randomized Controlled Trials with Death and Missingness |
idendr0 | Interactive Dendrograms |
identity | Jacquard Condensed Coefficients of Identity |
ideq | Bayesian Dynamic Spatio-Temporal Models, Including the Integrodifference Equation Model |
ider | Various Methods for Estimating Intrinsic Dimension |
IDetect | Isolate-Detect Methodology for Multiple Change-Point Detection |
iDINGO | Integrative Differential Network Analysis in Genomics |
idiogramFISH | Idiograms with Marks and Karyotype Indices |
idm | Incremental Decomposition Methods |
IDmeasurer | Assessment of Individual Identity in Animal Signals |
IDmining | Intrinsic Dimension for Data Mining |
idmodelr | Infectious Disease Model Library and Utilities |
idmTPreg | Regression Model for Progressive Illness Death Data |
iDOS | Integrated Discovery of Oncogenic Signatures |
IDPmisc | 'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)' |
IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |
idr | Irreproducible discovery rate |
ids | Generate Random Identifiers |
IDSpatialStats | Estimate Global Clustering in Infectious Disease |
idx2r | Convert Files to and from IDX Format to Vectors, Matrices and Arrays |
iDynoR | R Analysis package for iDynoMiCS Simulation Results |
ie2misc | Irucka Embry's Miscellaneous USGS Functions |
ieeeround | Functions to set and get the IEEE rounding mode |
iemisc | Irucka Embry's Miscellaneous Functions |
iemiscdata | Irucka Embry's Miscellaneous Data Collection |
iemisctext | Irucka Embry's Miscellaneous Text Collection |
IETD | Inter-Event Time Definition |
ifa | Independent Factor Analysis |
iFad | An integrative factor analysis model for drug-pathway association inference |
ifaTools | Toolkit for Item Factor Analysis with 'OpenMx' |
IFC | Tools for Imaging Flow Cytometry |
ifctools | Italian Fiscal Code ('Codice Fiscale') Utilities |
IFP | Identifying Functional Polymorphisms |
ifs | Iterated Function Systems |
ig.vancouver.2014.topcolour | Instagram 2014 Vancouver Top Colour Dataset |
iGasso | Statistical Tests and Utilities for Genetic Association |
igate | Guided Analytics for Testing Manufacturing Parameters |
IGG | Inverse Gamma-Gamma |
iglu | Interpreting Glucose Data from Continuous Glucose Monitors |
IgorR | Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data) |
IGP | Interchangeable Gaussian Process Models |
igraph | Network Analysis and Visualization |
igraphdata | A Collection of Network Data Sets for the 'igraph' Package |
igraphinshiny | Use 'shiny' to Demo 'igraph' |
igraphtosonia | Convert iGraph graps to SoNIA .son files |
iGSEA | Integrative Gene Set Enrichment Analysis Approaches |
IGST | Informative Gene Selection Tool |
iheatmapr | Interactive, Complex Heatmaps |
ihpdr | Download Data from the International House Price Database |
ihs | Inverse Hyperbolic Sine Distribution |
IHSEP | Inhomogeneous Self-Exciting Process |
iilasso | Independently Interpretable Lasso |
iIneq | Computing Individual Components of the Gini and the Theil Indices |
ijtiff | Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files |
ilc | Lee-Carter Mortality Models using Iterative Fitting Algorithms |
ILS | Interlaboratory Study |
IM | Orthogonal Moment Analysis |
IMAGE | Integrated Methylation QTL Mapping and Allele-Specific Analysis |
image.binarization | Binarize Images for Enhancing Optical Character Recognition |
image.CannyEdges | Implementation of the Canny Edge Detector for Images |
image.ContourDetector | Implementation of the Unsupervised Smooth Contour Line Detection for Images |
image.CornerDetectionF9 | Find Corners in Digital Images with FAST-9 |
image.CornerDetectionHarris | Implementation of the Harris Corner Detection for Images |
image.dlib | Image Processing Functionality using the 'dlib' Package |
image.libfacedetection | Convolutional Neural Network for Face Detection |
image.LineSegmentDetector | Detect Line Segments in Images |
image.Otsu | Otsu's Image Segmentation Method |
imageData | Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer |
imagefluency | Image Statistics Based on Processing Fluency |
imagefx | Extract Features from Images |
imager | Image Processing Library Based on 'CImg' |
imagerExtra | Extra Image Processing Library Based on 'imager' |
IMaGES | Independent Multiple-Sample Greedy Equivalence Search Implementation |
imageviewer | Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast |
imagine | IMAGing engINEs, Tools for Application of Image Filters to Data Matrices |
ImaginR | Delimit and Characterize Color Phenotype of the Pearl Oyster |
IMak | Item Maker |
Imap | Interactive Mapping |
imbalance | Preprocessing Algorithms for Imbalanced Datasets |
imdbapi | Get Movie, Television Data from the 'imdb' Database |
iMediate | Likelihood Methods for Mediation Analysis |
IMFData | R Interface for International Monetary Fund(IMF) Data API |
imfr | Download Data from the International Monetary Fund's Data API |
imgpalr | Create Color Palettes from Images |
imgrec | Image Recognition |
imguR | An Imgur.com API Client Package |
IMIFA | Infinite Mixtures of Infinite Factor Analysers and Related Models |
IMIS | Increamental Mixture Importance Sampling |
iml | Interpretable Machine Learning |
IMmailgun | Send Emails using 'Mailgun' |
immcp | Candidate Prescriptions Discovery Based on Pathway Fingerprint |
immer | Item Response Models for Multiple Ratings |
Immigrate | Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection |
immunarch | Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires |
immuneSIM | Tunable Simulation of B- And T-Cell Receptor Repertoires |
IMP | Interactive Model Performance Evaluation |
imp4p | Imputation for Proteomics |
IMPACT | The Impact of Items |
ImpactEffectsize | Calculation and Visualization of the Impact Effect Size Measure |
impactflu | Quantification of Population-Level Impact of Vaccination |
ImpactIV | Identifying Causal Effect for Multi-Component Intervention Using Instrumental Variable Method |
impimp | Imprecise Imputation for Statistical Matching |
implicitMeasures | Compute Scores for Different Implicit Measures |
implied | Convert Bookmaker Odds to Probabilities |
implyr | R Interface for Apache Impala |
import | An Import Mechanism for R |
importar | Enables Importing/Loading of Packages or Functions While Creating an Alias for Them |
ImportExport | Import and Export Data |
importinegi | Download and Manage Open Data from INEGI |
impressionist.colors | Impressionism's Color Palettes |
imptree | Classification Trees with Imprecise Probabilities |
imputeFin | Imputation of Financial Time Series with Missing Values and/or Outliers |
imputeLCMD | A collection of methods for left-censored missing data imputation |
imputeMDR | The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data |
imputeMissings | Impute Missing Values in a Predictive Context |
imputeMulti | Imputation Methods for Multivariate Multinomial Data |
imputePSF | Impute Missing Data in Time Series Data with PSF Based Method |
imputeR | A General Multivariate Imputation Framework |
ImputeRobust | Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape |
imputeTestbench | Test Bench for the Comparison of Imputation Methods |
imputeTS | Time Series Missing Value Imputation |
imputeYn | Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares |
iMRMC | Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics) |
imsig | Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours |
IMTest | Information Matrix Test for Generalized Partial Credit Models |
in2extRemes | Into the extRemes Package |
inaparc | Initialization Algorithms for Partitioning Cluster Analysis |
inbreedR | Analysing Inbreeding Based on Genetic Markers |
inca | Integer Calibration |
incadata | Recognize and Handle Data in Formats Used by Swedish Cancer Centers |
INCATome | Internal Control Analysis of Translatome Studies by Microarrays |
IncDTW | Incremental Calculation of Dynamic Time Warping |
incgraph | Incremental Graphlet Counting for Network Optimisation |
incidence | Compute, Handle, Plot and Model Incidence of Dated Events |
IncomPair | Comparison of Means for the Incomplete Paired Data |
incR | Analysis of Incubation Data |
inctools | Incidence Estimation Tools |
indelmiss | Insertion Deletion Analysis While Accounting for Possible Missing Data |
IndepTest | Nonparametric Independence Tests Based on Entropy Estimation |
IndexConstruction | Index Construction for Time Series Data |
IndexNumber | Index Numbers in Social Sciences |
IndexNumR | Index Number Calculation |
IndianTaxCalc | Indian Income Tax Calculator |
indicspecies | Relationship Between Species and Groups of Sites |
indirect | Elicitation of Independent Conditional Means Priors for Generalised Linear Models |
InDisc | Obtaining and Estimating Unidimensional IRT Dual Models |
IndTestPP | Tests of Independence Between Point Processes in Time |
inegiR | Integrate INEGI’s (Mexican Stats Office) API with R |
ineq | Measuring Inequality, Concentration, and Poverty |
ineqJD | Inequality Joint Decomposition |
iNEXT | Interpolation and Extrapolation for Species Diversity |
InfDim | Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories |
infer | Tidy Statistical Inference |
inference | Functions to extract inferential values of a fitted model object |
InferenceSMR | Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival |
inferference | Methods for Causal Inference with Interference |
inferr | Inferential Statistics |
infinitefactor | Bayesian Infinite Factor Models |
InfiniumPurify | Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis |
infix | Basic Infix Binary Operators |
Inflation | Core Inflation |
inflection | Finds the Inflection Point of a Curve |
influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |
influence.SEM | Case Influence in Structural Equation Models |
influenceAUC | Identify Influential Observations in Binary Classification |
influenceR | Software Tools to Quantify Structural Importance of Nodes in a Network |
influential | Identification and Classification of the Most Influential Nodes |
influxdbr | R Interface to InfluxDB |
infoDecompuTE | Information Decomposition of Two-Phase Experiments |
Information | Data Exploration with Information Theory (Weight-of-Evidence and Information Value) |
InformationValue | Performance Analysis and Companion Functions for Binary Classification Models |
InformativeCensoring | Multiple Imputation for Informative Censoring |
informR | Sequence Statistics for Relational Event Models |
infotheo | Information-Theoretic Measures |
InfoTrad | Calculates the Probability of Informed Trading (PIN) |
infra | An Infrastructure Proxy Function |
infraFDTD.assist | IO Help for infraFDTD Model |
Infusion | Inference Using Simulation |
infutil | Information Utility |
ingredients | Effects and Importances of Model Ingredients |
ini | Read and Write '.ini' Files |
injectoR | R Dependency Injection |
InjurySeverityScore | Translate ICD-9 into Injury Severity Score |
INLABMA | Bayesian Model Averaging with INLA |
inlabru | Spatial Inference using Integrated Nested Laplace Approximation |
INLAMSM | Multivariate Spatial Models with 'INLA' |
inline | Functions to Inline C, C++, Fortran Function Calls from R |
inlinedocs | Convert Inline Comments to Documentation |
inlmisc | Miscellaneous Functions for the USGS INL Project Office |
inops | Infix Operators for Detection, Subsetting and Replacement |
inpdfr | Analyse Text Documents Using Ecological Tools |
inplace | In-place Operators for R |
InPosition | Inference Tests for ExPosition |
insect | Informatic Sequence Classification Trees |
insee | Tools to Easily Download Data from INSEE BDM Database |
insideRODE | insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes |
insight | Easy Access to Model Information for Various Model Objects |
InSilicoVA | Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm |
insol | Solar Radiation |
InspectChangepoint | High-Dimensional Changepoint Estimation via Sparse Projection |
inspectdf | Inspection, Comparison and Visualisation of Data Frames |
INSPIRE | Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets |
install.load | Check, Install and Load CRAN & USGS GRAN Packages |
installr | Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) |
instaR | Access to Instagram API via R |
insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |
insurancerating | Analytic Insurance Rating Techniques |
intamap | Procedures for Automated Interpolation |
intamapInteractive | Interactive Add-on Functionality for 'intamap' |
intccr | Semiparametric Competing Risks Regression under Interval Censoring |
intcensROC | Fast Spline Function Based Constrained Maximum Likelihood Estimator for AUC Estimation of Interval Censored Survival Data |
IntClust | Integration of Multiple Data Sets with Clustering Techniques |
intcure | Mixture Cure Models with Random Effects |
intdag | Reconstruction of a Directed Acyclic Graph with Interventions |
integIRTy | Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory |
integr | An Implementation of Interaction Graphs of Aleks Jakulin |
IntegrateBs | Integration for B-Spline |
IntegratedJM | Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature |
IntegratedMRF | Integrated Prediction using Uni-Variate and Multivariate Random Forests |
intensity.analysis | Intensity of Change for Comparing Categorical Maps from Sequential Intervals |
intePareto | Integrative Analysis of RNA-Seq and ChIP-Seq Data |
Interact | Tests for marginal interactions in a 2 class response model |
interactionR | Full Reporting of Interaction Analyses |
interactions | Comprehensive, User-Friendly Toolkit for Probing Interactions |
interactionTest | Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots |
InteractiveIGraph | interactive network analysis and visualization |
interAdapt | interAdapt |
Interatrix | Compute Chi-Square Measures with Corrections |
interep | Interaction Analysis of Repeated Measure Data |
InterfaceqPCR | GUI to Analyse qPCR Results after PMA Treatment or not |
interferenceCI | Exact Confidence Intervals in the Presence of Interference |
interflex | Multiplicative Interaction Models Diagnostics and Visualization |
interfr | Interference Color Charts for Polarized Light Microscopy |
intergraph | Coercion Routines for Network Data Objects |
interim | Scheduling Interim Analyses in Clinical Trials |
interimApp | App for Scheduling Interim Analyses in Clinical Trials |
interlineaR | Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software |
internetarchive | An API Client for the Internet Archive |
interp | Interpolation Methods |
interplot | Plot the Effects of Variables in Interaction Terms |
Interpol | Interpolation of amino acid sequences |
Interpol.T | Hourly interpolation of multiple temperature daily series |
interpret | Fit Interpretable Machine Learning Models and Explain Blackbox Machine Learning |
InterpretMSSpectrum | Interpreting High Resolution Mass Spectra |
interpretR | Binary Classifier and Regression Model Interpretation Functions |
InterSIM | Simulation of Inter-Related Genomic Datasets |
InterVA4 | Replicate and Analyse 'InterVA4' |
InterVA5 | Replicate and Analyse 'InterVA5' |
interval | Weighted Logrank Tests and NPMLE for interval censored data |
intervalaverage | Time-Weighted Averaging for Interval Data |
intervals | Tools for Working with Points and Intervals |
IntervalSurgeon | Operating on Integer-Bounded Intervals |
intervcomp | Hypothesis Testing Using the Overlapping Interval Estimates |
interventionalDBN | Interventional Inference for Dynamic Bayesian Networks |
intkrige | A Numerical Implementation of Interval-Valued Kriging |
IntLik | Numerical Integration for Integrated Likelihood |
intmed | Mediation Analysis using Interventional Effects |
IntNMF | Integrative Clustering of Multiple Genomic Dataset |
intoo | Minimal Language-Like Extensions |
inTrees | Interpret Tree Ensembles |
intRegGOF | Integrated Regression Goodness of Fit |
IntrinioStockAPI | Wrapper for the 'Intrinio Stock API' |
intrinsicDimension | Intrinsic Dimension Estimation |
introgress | methods for analyzing introgression between divergent lineages |
intrval | Relational Operators for Intervals |
intRvals | Analysis of Time-Ordered Event Data with Missed Observations |
intsurv | Integrative Survival Modeling |
intsurvbin | Survival and Binary Data Integration |
intsvy | International Assessment Data Manager |
intubate | Interface to Popular R Functions for Data Science Pipelines |
inum | Interval and Enum-Type Representation of Vectors |
InvariantCausalPrediction | Invariant Causal Prediction |
InvasionCorrection | Invasion Correction |
invctr | Infix Functions For Vector Operations |
inventorize | Inventory Analytics and Cost Calculations |
Inventorymodel | Inventory Models |
inverseRegex | Reverse Engineers Regular Expression Patterns for R Objects |
investr | Inverse Estimation/Calibration Functions |
invgamma | The Inverse Gamma Distribution |
invGauss | Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data |
invLT | Inversion of Laplace-Transformed Functions |
iNZightMR | Tools for Exploring Multiple Response Data |
iNZightTools | Tools for 'iNZight' |
iNZightTS | Time Series for 'iNZight' |
io | A Unified Framework for Input-Output Operations in R |
ioanalysis | Input Output Analysis |
IOHanalyzer | Data Analysis Part of 'IOHprofiler' |
IOHexperimenter | Benchmarking Part of the 'IOHprofiler' |
ioncopy | Calling Copy Number Alterations in Amplicon Sequencing Data |
ionflows | Calculate the Number of Required Flows for Semiconductor Sequencing |
ionr | Test for Indifference of Indicator |
iopsych | Methods for Industrial/Organizational Psychology |
iosmooth | Functions for Smoothing with Infinite Order Flat-Top Kernels |
iotables | Importing and Manipulating Symmetric Input-Output Tables |
iotools | I/O Tools for Streaming |
ip2location | Lookup for IP Address Information |
ipa | Convert Between Phonetic Alphabets |
ipaddress | Tidy IP Addresses |
ipADMIXTURE | Iterative Pruning Population Admixture Inference Framework |
ipc | Tools for Message Passing Between Processes |
IPCWK | Kendall's Tau Partial Corr. for Survival Trait and Biomarkers |
ipcwswitch | Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials |
IPDFileCheck | Basic Functions to Check Readability, Consistency, and Content of an Individual Participant Data File |
ipdmeta | Tools for subgroup analyses with multiple trial data using aggregate statistics |
ipdw | Spatial Interpolation by Inverse Path Distance Weighting |
ipeadatar | API Wrapper for 'Ipeadata' |
IPEC | Root Mean Square Curvature Calculation |
ipflasso | Integrative Lasso with Penalty Factors |
ipfp | Fast Implementation of the Iterative Proportional Fitting Procedure in C |
ipfr | List Balancing for Reweighting and Population Synthesis |
ipft | Indoor Positioning Fingerprinting Toolset |
ipify | Query the Ipify Service |
iplots | iPlots - interactive graphics for R |
ipmisc | Miscellaneous Functions for Data Cleaning and Analysis |
IPMRF | Intervention in Prediction Measure (IPM) for Random Forests |
IPPP | Inhomogeneous Poisson Point Processes |
ipptoolbox | IPP Toolbox |
ipr | Iterative Proportional Repartition Algorithm |
ipred | Improved Predictors |
iprior | Regression Modelling using I-Priors |
ips | Interfaces to Phylogenetic Software in R |
iptmnetr | Interface to the 'iPTMnet' API |
iptools | Manipulate, Validate and Resolve 'IP' Addresses |
ipumsr | Read 'IPUMS' Extract Files |
IPV | Item Pool Visualization |
ipw | Estimate Inverse Probability Weights |
IPWboxplot | Adapted Boxplot to Missing Observations |
ipwCoxCSV | Inverse Probability Weighted Cox Model with Corrected Sandwich Variance |
ipwErrorY | Inverse Probability Weighted Estimation of Average Treatment Effect with Misclassified Binary Outcome |
iq | Protein Quantification in Mass Spectrometry-Based Proteomics |
IQCC | Improved Quality Control Charts |
iqLearn | Interactive Q-Learning |
irace | Iterated Racing for Automatic Algorithm Configuration |
iRafNet | Integrative Random Forest for Gene Regulatory Network Inference |
IRATER | A R Interface for the Instantaneous RATEs (IRATE) Model |
ircor | Correlation Coefficients for Information Retrieval |
IRdisplay | 'Jupyter' Display Machinery |
iRegression | Regression Methods for Interval-Valued Variables |
iRepro | Reproducibility for Interval-Censored Data |
Irescale | Calculate and Rectify Moran's I |
iRF | iterative Random Forests |
irg | Instantaneous Rate of Green Up |
IrishDirectorates | A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 |
IRISMustangMetrics | Statistics and Metrics for Seismic Data |
IRISSeismic | Classes and Methods for Seismic Data Analysis |
IRkernel | Native R Kernel for the 'Jupyter Notebook' |
irlba | Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices |
IROmiss | Imputation Regularized Optimization Algorithm |
irr | Various Coefficients of Interrater Reliability and Agreement |
irrCAC | Computing Chance-Corrected Agreement Coefficients (CAC) |
IrregLong | Analysis of Longitudinal Data with Irregular Observation Times |
irregulAR1 | Functions for Irregularly Sampled AR(1) Processes |
irrICC | Intraclass Correlations for Quantifying Inter-Rater Reliability |
irrNA | Coefficients of Interrater Reliability - Generalized for Randomly Incomplete Datasets |
irtDemo | Item Response Theory Demo Collection |
irtoys | A Collection of Functions Related to Item Response Theory (IRT) |
irtplay | Unidimensional Item Response Theory Modeling |
irtProb | Utilities and Probability Distributions Related to Multidimensional Person Item Response Models |
irtrees | Estimation of Tree-Based Item Response Models |
irtreliability | Item Response Theory Reliability |
IRTShiny | Item Response Theory via Shiny |
isa2 | The Iterative Signature Algorithm |
ISAT | Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output |
ISBF | Iterative Selection of Blocks of Features - ISBF |
ISCO08ConveRsions | Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name |
isdals | Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences |
iSDM | Invasive Species Distribution Modelling |
isdparser | Parse 'NOAA' Integrated Surface Data Files |
ISEtools | Tools for Ion Selective Electrodes |
IsingFit | Fitting Ising Models Using the ELasso Method |
isingLenzMC | Monte Carlo for Classical Ising Model |
IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |
island | Stochastic Island Biogeography Theory Made Easy |
islasso | The Induced Smoothed Lasso |
ISLR | Data for an Introduction to Statistical Learning with Applications in R |
ISM | Interpretive Structural Modelling (ISM) |
ismev | An Introduction to Statistical Modeling of Extreme Values |
isni | Index of Local Sensitivity to Nonignorability |
isnullptr | Check if an 'externalptr' is a Null Pointer |
Iso | Functions to Perform Isotonic Regression |
isoband | Generate Isolines and Isobands from Regularly Spaced Elevation Grids |
isoboost | Isotonic Boosting Classification Rules |
isocat | Isotope Origin Clustering and Assignment Tools |
IsoCheck | Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions |
IsoCI | Confidence intervals for current status data based on transformations and bootstrap |
isocir | Isotonic Inference for Circular Data |
ISOcodes | Selected ISO Codes |
IsoGene | Order-Restricted Inference for Microarray Experiments |
isopam | Isopam (Clustering) |
isopat | Calculation of isotopic pattern for a given molecular formula |
IsoplotR | Statistical Toolbox for Radiometric Geochronology |
ISOpureR | Deconvolution of Tumour Profiles |
IsoriX | Isoscape Computation and Inference of Spatial Origins using Mixed Models |
IsoSpecR | The IsoSpec Algorithm |
isoSurv | Isotonic Regression on Survival Analysis |
isotone | Active Set and Generalized PAVA for Isotone Optimization |
isotonic.pen | Penalized Isotonic Regression in one and two dimensions |
IsotopeR | Stable Isotope Mixing Model |
isotree | Isolation-Based Outlier Detection |
ISOweek | Week of the year and weekday according to ISO 8601 |
ispd | Incomplete Split-Plot Designs |
isqg | In Silico Quantitative Genetics |
ISR3 | Iterative Sequential Regression |
ISRaD | Tools and Data for the International Soil Radiocarbon Database |
istacr | Obtaining Open Data from Instituto Canario De Estadistica (ISTAC) API |
iSTATS | A Graphical Interface to Perform STOCSY Analyses on NMR Data |
isva | Independent Surrogate Variable Analysis |
ISwR | Introductory Statistics with R |
italy | The Italian Survey on Household and Wealth, 2008 and 2010 |
itan | Item Analysis for Multiple Choice Tests |
itcSegment | Individual Tree Crowns Segmentation |
itemanalysis | Classical Test Theory Item Analysis |
ItemResponseTrees | IR-Tree Modeling in 'mirt', 'Mplus', or 'TAM' |
iteRates | Parametric rate comparison |
iterators | Provides Iterator Construct |
iterLap | Approximate Probability Densities by Iterated Laplace Approximations |
iterpc | Efficient Iterator for Permutations and Combinations |
itertools | Iterator Tools |
itertools2 | itertools2: Functions creating iterators for efficient looping |
ITGM | Individual Tree Growth Modeling |
ITNr | Analysis of the International Trade Network |
iTOP | Inferring the Topology of Omics Data |
ITRLearn | Statistical Learning for Individualized Treatment Regime |
ITRSelect | Variable Selection for Optimal Individualized Dynamic Treatment Regime |
its.analysis | Running Interrupted Time Series Analysis |
itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |
itsmr | Time Series Analysis Using the Innovations Algorithm |
IUPS | Incorporating Uncertainties in Propensity Scores |
iva | Instrumental Variable Analysis in Case-Control Association Studies |
ivdesc | Profiling Compliers and Non-Compliers for Instrumental Variable Analysis |
ivdesign | Hypothesis Testing in Cluster-Randomized Encouragement Designs |
ivdoctr | Ensures Mutually Consistent Beliefs When Using IVs |
ivfixed | Instrumental fixed effect panel data model |
ivmodel | Statistical Inference and Sensitivity Analysis for Instrumental Variables Model |
ivmte | Instrumental Variables: Extrapolation by Marginal Treatment Effects |
ivpack | Instrumental Variable Estimation |
ivpanel | Instrumental Panel Data Models |
ivprobit | Instrumental Variables Probit Model |
ivregEX | Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis |
ivtools | Instrumental Variables |
ivx | Robust Econometric Inference |
iWeigReg | Improved methods for causal inference and missing data problems |
iWISA | Wavelet-Based Index of Storm Activity |
iZID | Identify Zero-Inflated Distributions |
J4R | Create 'Java' Objects and Execute 'Java' Methods |
jaatha | Simulation-Based Maximum Likelihood Parameter Estimation |
jabr | Easy Access for West Java Data |
jaccard | Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients |
jack | Jack, Zonal, and Schur Polynomials |
jackalope | A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator |
jackknifeKME | Jackknife Estimates of Kaplan-Meier Estimators or Integrals |
jackstrap | Correcting Nonparametric Frontier Measurements for Outliers |
jackstraw | Statistical Inference for Unsupervised Learning |
JacobiEigen | Classical Jacobi Eigenvalue Algorithm |
jacpop | Jaccard Index for Population Structure Identification |
JADE | Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria |
jaggR | Supporting Files and Functions for the Book Bayesian Modelling with 'JAGS' |
jagsUI | A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses |
JamendoR | Access to 'Jamendo' API |
james.analysis | Analysis Tools for the 'JAMES' Framework |
janeaustenr | Jane Austen's Complete Novels |
janitor | Simple Tools for Examining and Cleaning Dirty Data |
jaod | Directory of Open Access Journals Client |
jarbes | Just a Rather Bayesian Evidence Synthesis |
JASPAR | R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices |
JavaGD | Java Graphics Device |
Jaya | Jaya, a Gradient-Free Optimization Algorithm |
jcext | Extended Classification of Weather Types |
jcolors | Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2' |
jcp | Joint Change Point Detection |
Jdmbs | Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies |
jdx | 'Java' Data Exchange for 'R' and 'rJava' |
jeek | A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models |
jetpack | A Friendly Package Manager |
jetset | One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays |
jfa | Bayesian and Classical Audit Sampling |
JFE | Tools and GUI for Analyzing Data of Just Finance and Econometrics |
JGEE | Joint Generalized Estimating Equation Solver |
JGL | Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes |
JGR | Java GUI for R |
jiebaR | Chinese Text Segmentation |
jiebaRD | Chinese Text Segmentation Data for jiebaR Package |
jipApprox | Approximate Inclusion Probabilities for Survey Sampling |
jjb | Balamuta Miscellaneous |
jlctree | Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data |
JM | Joint Modeling of Longitudinal and Survival Data |
JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |
jmcm | Joint Mean-Covariance Models using 'Armadillo' and S4 |
JMcmprsk | Joint Models for Longitudinal and Competing Risks Data |
jmdem | Fitting Joint Mean and Dispersion Effects Models |
JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |
jmdl | Joint Mean-Correlation Regression Approach for Discrete Longitudinal Data |
jmetrik | Tools for Interacting with 'jMetrik' |
JMI | Jackknife Mutual Information |
Jmisc | Julian Miscellaneous Function |
jmotif | Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX |
jmuOutlier | Permutation Tests for Nonparametric Statistics |
jmv | The 'jamovi' Analyses |
jmvconnect | Connect to the 'jamovi' Statistical Spreadsheet |
jmvcore | Dependencies for the 'jamovi' Framework |
jocre | Joint Confidence Regions |
JoF | Modelling and Simulating Judgments of Frequency |
Johnson | Johnson Transformation |
joineR | Joint Modelling of Repeated Measurements and Time-to-Event Data |
joineRmeta | Joint Modelling for Meta-Analytic (Multi-Study) Data |
joineRML | Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes |
joinet | Multivariate Elastic Net Regression |
joint.Cox | Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis |
JointAI | Joint Analysis and Imputation of Incomplete Data |
jointDiag | Joint Approximate Diagonalization of a Set of Square Matrices |
jointMeanCov | Joint Mean and Covariance Estimation for Matrix-Variate Data |
JointModel | Semiparametric Joint Models for Longitudinal and Counting Processes |
JointNets | End-to-End Sparse Gaussian Graphical Model Simulation, Estimation, Visualization, Evaluation and Application |
jointNmix | Joint N-Mixture Models for Site-Associated Species |
jointPm | Risk estimation using the joint probability method |
jointseg | Joint Segmentation of Multivariate (Copy Number) Signals |
joinXL | Perform Joins or Minus Queries on 'Excel' Files |
jomo | Multilevel Joint Modelling Multiple Imputation |
JOP | Joint Optimization Plot |
JoSAE | Unit-Level and Area-Level Small Area Estimation |
josaplay | Add Josa Based on Previous Letter in Korean |
jose | JavaScript Object Signing and Encryption |
journalabbr | Journal Abbreviations for BibTeX Documents |
JOUSBoost | Implements Under/Oversampling for Probability Estimation |
jpeg | Read and write JPEG images |
JPEN | Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty |
jpmesh | Utilities for Japanese Mesh Code |
jpndistrict | Create Japanese Administration Area and Office Maps |
JQL | Jump Q-Learning for Individualized Interval-Valued Dose Rule |
jqr | Client for 'jq', a 'JSON' Processor |
jquerylib | Obtain 'jQuery' as an HTML Dependency Object |
jrc | Exchange Commands Between R and 'JavaScript' |
JRF | Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks |
jrich | Jack-Knife Support for Evolutionary Distinctiveness Indices I and W |
jrt | Item Response Theory Modeling and Scoring for Judgment Data |
jrvFinance | Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes |
js | Tools for Working with JavaScript in R |
jSDM | Joint Species Distribution Models |
jskm | Kaplan-Meier Plot with 'ggplot2' |
JSmediation | Mediation Analysis Using Joint Significance |
jsmodule | 'RStudio' Addins and 'Shiny' Modules for Medical Research |
json64 | A 'Base64' Encode/Decode Package with Support for JSON Output/Input and UTF-8 |
jSonarR | jSonar Analytics Platform API for R |
jsonify | Convert Between 'R' Objects and Javascript Object Notation (JSON) |
jsonld | JSON for Linking Data |
jsonlite | A Robust, High Performance JSON Parser and Generator for R |
jsonstat | Interface to 'JSON-stat' |
jsonvalidate | Validate 'JSON' |
jsr223 | A 'Java' Platform Integration for 'R' with Programming Languages 'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'), and 'Kotlin' |
jstable | Create Tables from Different Types of Regression |
jstor | Read Data from JSTOR/DfR |
jsTree | Create Interactive Trees with the 'jQuery' 'jsTree' Plugin |
jtGWAS | Efficient Jonckheere-Terpstra Test Statistics |
jtools | Analysis and Presentation of Social Scientific Data |
jtrans | Johnson Transformation for Normality |
jubilee | Forecasting Long-Term Growth of the U.S. Stock Market and Business Cycles |
Julia | Fractal Image Data Generator |
JuliaCall | Seamless Integration Between R and 'Julia' |
JuliaConnectoR | A Functionally Oriented Interface for Integrating 'Julia' with R |
JumpTest | Financial Jump Detection |
junctions | The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages |
justifier | Human and Machine-Readable Justifications and Justified Decisions Based on 'YAML' |
jvcoords | Principal Component Analysis (PCA) and Whitening |
jvnVaR | Value at Risk |
JWileymisc | Miscellaneous Utilities and Functions |
jwutil | Tools for Data Manipulation and Testing |
kableExtra | Construct Complex Table with 'kable' and Pipe Syntax |
kader | Kernel Adaptive Density Estimation and Regression |
kamila | Methods for Clustering Mixed-Type Data |
kangar00 | Kernel Approaches for Nonlinear Genetic Association Regression |
KANT | Package to identify and sort genes overexpressed |
kaos | Encoding of Sequences Based on Frequency Matrix Chaos Game Representation |
kaphom | Test the Homogeneity of Kappa Statistics |
KappaGUI | An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa |
kappalab | Non-Additive Measure and Integral Manipulation Functions |
kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |
KappaV | Calculates "vectorial Kappa", an index of congruence between patchy mosaics |
kaps | K-Adaptive Partitioning for Survival data |
karaoke | Remove Vocals from a Song |
KarsTS | An Interface for Microclimate Time Series Analysis |
kayadata | Kaya Identity Data for Nations and Regions |
kazaam | Tools for Tall Distributed Matrices |
KbMvtSkew | Khattree-Bahuguna's Univariate and Multivariate Skewness |
kcirt | k-Cube Thurstonian IRT Models |
kcopula | The Bivariate K-Copula |
kcpRS | Kernel Change Point Detection on the Running Statistics |
KCSKNNShiny | K-Nearest Neighbour Classifier |
KCSNBShiny | Naive Bayes Classifier |
kde1d | Univariate Kernel Density Estimation |
kdecopula | Kernel Smoothing for Bivariate Copula Densities |
kdensity | Kernel Density Estimation with Parametric Starts and Asymmetric Kernels |
kdetrees | Nonparametric method for identifying discordant phylogenetic trees |
kdevine | Multivariate Kernel Density Estimation with Vine Copulas |
kdist | K-Distribution and Weibull Paper |
kdtools | Tools for Working with Multidimensional Data |
KDViz | Knowledge Domain Visualization |
kedd | Kernel Estimator and Bandwidth Selection for Density and Its Derivatives |
keep | Arrays with Better Control over Dimension Dropping |
kehra | Collect, Assemble and Model Air Pollution, Weather and Health Data |
kelvin | Calculate Solutions to the Kelvin Differential Equation using Bessel Functions |
Kendall | Kendall rank correlation and Mann-Kendall trend test |
kendallRandomWalks | Simulate and Visualize Kendall Random Walks and Related Distributions |
KENDL | Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits |
KenSyn | Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis |
kequate | The Kernel Method of Test Equating |
keras | R Interface to 'Keras' |
kerasR | R Interface to the Keras Deep Learning Library |
kerastuneR | Interface to 'Keras Tuner' |
kerdiest | Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions |
KERE | Expectile Regression in Reproducing Kernel Hilbert Space |
kergp | Gaussian Process Laboratory |
kernelboot | Smoothed Bootstrap and Random Generation from Kernel Densities |
kernelFactory | Kernel Factory: An Ensemble of Kernel Machines |
Kernelheaping | Kernel Density Estimation for Heaped and Rounded Data |
KernelKnn | Kernel k Nearest Neighbors |
kernelPSI | Post-Selection Inference for Nonlinear Variable Selection |
kernelTDA | Statistical Learning with Kernel for Persistence Diagrams |
kernhaz | Kernel Estimation of Hazard Function in Survival Analysis |
kernlab | Kernel-Based Machine Learning Lab |
kernplus | A Kernel Regression-Based Multidimensional Wind Turbine Power Curve |
kernscr | Kernel Machine Score Test for Semi-Competing Risks |
KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |
KernSmoothIRT | Nonparametric Item Response Theory |
keyATM | Keyword Assisted Topic Model |
Keyboard | Bayesian Designs for Early Phase Clinical Trials |
KeyboardSimulator | Keyboard and Mouse Input Simulation for Windows OS |
keyholder | Store Data About Rows |
keyplayer | Locating Key Players in Social Networks |
keypress | Wait for a Key Press in a Terminal |
keyring | Access the System Credential Store from R |
keyringr | Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain |
KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |
kfda | Kernel Fisher Discriminant Analysis |
kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |
KFKSDS | Kalman Filter, Smoother and Disturbance Smoother |
kgc | Koeppen-Geiger Climatic Zones |
KGode | Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations |
kgschart | KGS Rank Graph Parser |
khroma | Colour Schemes for Scientific Data Visualization |
kidney.epi | Kidney Functions: Clinical and Epidemiological |
kimisc | Kirill's Miscellaneous Functions |
kin.cohort | Analysis of Kin-Cohort Studies |
kineticF | Framework for the Analysis of Kinetic Visual Field Data |
kinship2 | Pedigree Functions |
kirby21.base | Example Data from the Multi-Modal MRI 'Reproducibility' Resource |
kirby21.fmri | Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource |
kirby21.t1 | Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource |
kissmig | a Keep It Simple Species Migration Model |
kit | Data Manipulation Functions Implemented in C |
kitagawa | Spectral Response of Water Wells to Harmonic Strain and Pressure Signals |
kiwisR | A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS' API |
kknn | Weighted k-Nearest Neighbors |
klaR | Classification and Visualization |
klassR | Classifications and Codelists for Statistics Norway |
klausuR | Multiple Choice Test Evaluation |
klexdatr | Kootenay Lake Exploitation Study Data |
klic | Kernel Learning Integrative Clustering |
klustR | D3 Dynamic Cluster Visualizations |
km.ci | Confidence intervals for the Kaplan-Meier estimator |
kmc | Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm |
kmconfband | Kaplan-Meier Simultaneous Confidence Band for the Survivor Function |
kmcudaR | 'Yingyang' K-Means and K-NN using NVIDIA CUDA |
KMDA | Kernel-Based Metabolite Differential Analysis |
kmed | Distance-Based K-Medoids |
kmer | Fast K-Mer Counting and Clustering for Biological Sequence Analysis |
kmeRs | K-Mers Similarity Score Matrix |
kmi | Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting |
kml | K-Means for Longitudinal Data |
kml3d | K-Means for Joint Longitudinal Data |
kmlcov | Clustering longitudinal data using the likelihood as a metric of distance |
kmlShape | K-Means for Longitudinal Data using Shape-Respecting Distance |
kmodR | K-Means with Simultaneous Outlier Detection |
KMsurv | Data sets from Klein and Moeschberger (1997), Survival Analysis |
KMunicate | KMunicate-Style Kaplan–Meier Plots |
KnapsackSampling | Generate Feasible Samples of a Knapsack Problem |
knitcitations | Citations for 'Knitr' Markdown Files |
knitLatex | 'Knitr' Helpers - Mostly Tables |
knitr | A General-Purpose Package for Dynamic Report Generation in R |
knitrBootstrap | 'knitr' Bootstrap Framework |
knitrdata | Data Language Engine for 'knitr' / 'rmarkdown' |
knitrProgressBar | Provides Progress Bars in 'knitr' |
knn.covertree | An Accurate kNN Implementation with Multiple Distance Measures |
knnGarden | Multi-distance based k-Nearest Neighbors |
knnIndep | Independence tests and benchmarks |
knnp | Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel) |
KNNShiny | Interactive Document for Working with KNN Analysis |
knockoff | The Knockoff Filter for Controlled Variable Selection |
Knoema | Interface to the Knoema API |
knor | Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means |
knotR | Knot Diagrams using Bezier Curves |
KnowBR | Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases |
KnowGRRF | Knowledge-Based Guided Regularized Random Forest |
kntnr | R Client for 'kintone' API |
KOBT | Knockoff Boosted Tree |
kofdata | Get Data from the 'KOF Datenservice' API |
kofnGA | A Genetic Algorithm for Fixed-Size Subset Selection |
KOGMWU | Functional Summary and Meta-Analysis of Gene Expression Data |
kohonen | Supervised and Unsupervised Self-Organising Maps |
kokudosuuchi | R Interface to 'Kokudo Suuchi' API |
kolmim | An Improved Evaluation of Kolmogorov's Distribution |
komaletter | Simply Beautiful PDF Letters from Markdown |
KONPsurv | KONP Tests: Powerful K-Sample Tests for Right-Censored Data |
koRpus | An R Package for Text Analysis |
koRpus.lang.en | Language Support for 'koRpus' Package: English |
kosel | Variable Selection by Revisited Knockoffs Procedures |
KoulMde | Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model by Coordinate Descent Algorithm |
Kpart | Cubic Spline Fitting with Knot Selection |
kpcalg | Kernel PC Algorithm for Causal Structure Detection |
kpeaks | Determination of K Using Peak Counts of Features for Clustering |
kpmt | Known Population Median Test |
kpodclustr | Method for Clustering Partially Observed Data |
KraljicMatrix | A Quantified Implementation of the Kraljic Matrix |
kriens | Continuation Passing Style Development |
krige | Geospatial Kriging with Metropolis Sampling |
kriging | Ordinary Kriging |
KrigInv | Kriging-Based Inversion for Deterministic and Noisy Computer Experiments |
krippendorffsalpha | Measuring Agreement Using Krippendorff's Alpha Coefficient |
KRLS | Kernel-Based Regularized Least Squares |
krm | Kernel Based Regression Models |
KRMM | Kernel Ridge Mixed Model |
ks | Kernel Smoothing |
kSamples | K-Sample Rank Tests and their Combinations |
KScorrect | Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests |
KSD | Goodness-of-Fit Tests using Kernelized Stein Discrepancy |
KSEAapp | Kinase-Substrate Enrichment Analysis |
kselection | Selection of K in K-Means Clustering |
KSgeneral | Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution |
ksharp | Cluster Sharpening |
ksNN | K* Nearest Neighbors Algorithm |
KSPM | Kernel Semi-Parametric Models |
ksrlive | Identify Kinase Substrate Relationships Using Dynamic Data |
kst | Knowledge Space Theory |
kStatistics | Unbiased Estimators for Cumulant Products |
kstIO | Knowledge Space Theory Input/Output |
kstMatrix | Basic Functions in Knowledge Space Theory Using Matrix Representation |
ktaucenters | Robust Clustering Procedures |
KTensorGraphs | Co-Tucker3 Analysis of Two Sequences of Matrices |
ktsolve | Configurable Function for Solving Families of Nonlinear Equations |
ktspair | k-Top Scoring Pairs for Microarray Classification |
kubik | Cubic Hermite Splines and Related Optimization Methods |
kuiper.2samp | Two-Sample Kuiper Test |
kulife | Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen |
kuniezu | Assistance on the National Geography of Japan |
Kurt | Performs Kurtosis-Based Statistical Analyses |
kutils | Project Management Tools |
kvh | Read/Write Files in Key-Value-Hierarchy Format |
kwb.hantush | Calculation of Groundwater Mounding Beneath an Infiltration Basin |
kyotil | Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies |
kza | Kolmogorov-Zurbenko Adaptive Filters |
kzfs | Multi-Scale Motions Separation with Kolmogorov-Zurbenko Periodogram Signals |
kzft | Kolmogorov-Zurbenko Fourier Transform and Applications |
kzs | Kolmogorov-Zurbenko Spatial Smoothing and Applications |
l0ara | Sparse Generalized Linear Model with L0 Approximation for Feature Selection |
L0Learn | Fast Algorithms for Best Subset Selection |
l1ball | L1-Ball Prior for Sparse Regression |
l1kdeconv | Deconvolution for LINCS L1000 Data |
L1mstate | L1-Regularized Multi-State Models |
L1pack | Routines for L1 Estimation |
l2boost | Friedman's Boosting Algorithm for Regularized Linear Regression |
L2DensityGoFtest | Density Goodness-of-Fit Test |
labdsv | Ordination and Multivariate Analysis for Ecology |
label.switching | Relabelling MCMC Outputs of Mixture Models |
labeledLoop | Labeled Loop |
labeling | Axis Labeling |
labelled | Manipulating Labelled Data |
labelmachine | Make Labeling of R Data Sets Easy |
labelrank | Predicting Rankings of Labels |
labelVector | Label Attributes for Atomic Vectors |
LabourMarketAreas | Identification, Tuning, Visualisation and Analysis of Labour Market Areas |
labourR | Classify Multilingual Labour Market Free-Text to Standardized Hierarchical Occupations |
LabRS | Laboratorio di "Ricerca Sociale con R" |
labsimplex | Simplex Optimization Algorithms for Laboratory and Manufacturing Processes |
labstatR | Libreria Del Laboratorio Di Statistica Con R |
labstats | Data Sets for the Book "Experimental Design for Laboratory Biologists" |
lacm | Latent Autoregressive Count Models |
lactcurves | Lactation Curve Parameter Estimation |
lacunaritycovariance | Gliding Box Lacunarity and Other Metrics for 2D Random Closed Sets |
LadR | Routines for Fit, Inference and Diagnostics in LAD Models |
laeken | Estimation of Indicators on Social Exclusion and Poverty |
laercio | Duncan test, Tukey test and Scott-Knott test |
LaF | Fast Access to Large ASCII Files |
lagged | Classes and Methods for Lagged Objects |
LAGOSNE | Interface to the Lake Multi-Scaled Geospatial and Temporal Database |
laGP | Local Approximate Gaussian Process Regression |
lagsarlmtree | Spatial Lag Model Trees |
LagSequential | Lag-Sequential Categorical Data Analysis |
Lahman | Sean 'Lahman' Baseball Database |
LakeMetabolizer | Tools for the Analysis of Ecosystem Metabolism |
lakemorpho | Lake Morphometry Metrics |
laketemps | Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009 |
LAM | Some Latent Variable Models |
lambda.r | Modeling Data with Functional Programming |
Lambda4 | Collection of Internal Consistency Reliability Coefficients |
LambertW | Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data |
lamme | Log-Analytic Methods for Multiplicative Effects |
lamW | Lambert-W Function |
LANDD | Liquid Association for Network Dynamics Detection |
landest | Landmark Estimation of Survival and Treatment Effect |
landpred | Landmark Prediction of a Survival Outcome |
landsat | Radiometric and Topographic Correction of Satellite Imagery |
landsat8 | Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature |
landscapemetrics | Landscape Metrics for Categorical Map Patterns |
landscapeR | Categorical Landscape Simulation Facility |
landscapetools | Landscape Utility Toolbox |
landsepi | Landscape Epidemiology and Evolution |
Langevin | Langevin Analysis in One and Two Dimensions |
languagelayeR | Access the 'languagelayer' API |
languageR | Analyzing Linguistic Data: A Practical Introduction to Statistics |
languageserver | Language Server Protocol |
languageserversetup | Automated Setup and Auto Run for R Language Server |
lans2r | Work with Look at NanoSIMS Data in R |
LaplaceDeconv | Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval |
LaplacesDemon | Complete Environment for Bayesian Inference |
lar | History of labour relations package |
LARF | Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects |
largeList | Serialization Interface for Large List Objects |
LARisk | Estimation of Lifetime Attributable Risk of Cancer from Radiation Exposure |
lars | Least Angle Regression, Lasso and Forward Stagewise |
lass0 | Lasso-Zero for (High-Dimensional) Linear Regression |
lasso2 | L1 Constrained Estimation aka ‘lasso’ |
LassoBacktracking | Modelling Interactions in High-Dimensional Data with Backtracking |
LassoNet | 3CoSE Algorithm |
lassopv | Nonparametric P-Value Estimation for Predictors in Lasso |
lassoscore | High-Dimensional Inference with the Penalized Score Test |
lassoshooting | L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting |
LassoSIR | Sparsed Sliced Inverse Regression via Lasso |
latdiag | Draws Diagrams Useful for Checking Latent Scales |
latentnet | Latent Position and Cluster Models for Statistical Networks |
later | Utilities for Scheduling Functions to Execute Later with Event Loops |
Laterality | Functions to Calculate Common Laterality Statistics in Primatology |
latex2exp | Use LaTeX Expressions in Plots |
latexpdf | Convert Tables to PDF or PNG |
latte | Interface to 'LattE' and '4ti2' |
lattice | Trellis Graphics for R |
latticeDensity | Density Estimation and Nonparametric Regression on Irregular Regions |
LatticeDesign | Lattice-Based Space-Filling Designs |
latticeExtra | Extra Graphical Utilities Based on Lattice |
LatticeKrig | Multi-Resolution Kriging Based on Markov Random Fields |
lava | Latent Variable Models |
lava.tobit | Latent Variable Models with Censored and Binary Outcomes |
lavaan | Latent Variable Analysis |
lavaan.shiny | Latent Variable Analysis with Shiny |
lavaan.survey | Complex Survey Structural Equation Modeling (SEM) |
lavaanPlot | Path Diagrams for Lavaan Models via DiagrammeR |
lavaSearch2 | Tools for Model Specification in the Latent Variable Framework |
Lavash | Lava Estimation for the Sum of Sparse and Dense Signals |
LAWBL | Latent (Variable) Analysis with Bayesian Learning |
lawn | Client for 'Turfjs' for 'Geospatial' Analysis |
lawstat | Tools for Biostatistics, Public Policy, and Law |
lax | Loglikelihood Adjustment for Extreme Value Models |
lazy | Lazy Learning for Local Regression |
lazyarray | Persistent Large Data Array with Lazy-Loading on Demand |
lazybar | Progress Bar with Remaining Time Forecast Method |
lazyData | A LazyData Facility |
lazyeval | Lazy (Non-Standard) Evaluation |
lazyraster | Generate Raster Data Lazily from 'GDAL' |
lazysql | Lazy SQL Programming |
lazytrade | Learn Computer and Data Science using Algorithmic Trading |
lazyWeave | LaTeX Wrappers for R Users |
lba | Latent Budget Analysis for Compositional Data |
lbfgs | Limited-memory BFGS Optimization |
lbfgsb3c | Limited Memory BFGS Minimizer with Bounds on Parameters with optim() 'C' Interface |
lbiassurv | Length-biased correction to survival curve estimation |
lbreg | Log-Binomial Regression with Constrained Optimization |
LBSPR | Length-Based Spawning Potential Ratio |
LCA | Localised Co-Dependency Analysis |
LCAextend | Latent Class Analysis (LCA) with Familial Dependence in Extended Pedigrees |
lcars | LCARS Aesthetic for Shiny |
LCAvarsel | Variable Selection for Latent Class Analysis |
lcc | Longitudinal Concordance Correlation |
lcda | Latent Class Discriminant Analysis |
LCF | Linear Combination Fitting |
LCFdata | Data sets for package “LMERConvenienceFunctions” |
lchemix | A Bayesian Multi-Dimensional Couple-Based Latent Risk Model |
lclGWAS | Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data |
LCMCR | Bayesian Non-Parametric Latent-Class Capture-Recapture |
lcmm | Extended Mixed Models Using Latent Classes and Latent Processes |
lconnect | Simple Tools to Compute Landscape Connectivity Metrics |
lcopula | Liouville Copulas |
LCox | A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data |
lcpm | Ordinal Outcomes: Generalized Linear Models with the Log Link |
lcsm | Univariate and Bivariate Latent Change Score Modeling |
lctools | Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools |
lcyanalysis | Stock Data Analysis Functions |
lda | Collapsed Gibbs Sampling Methods for Topic Models |
ldamatch | Selection of Statistically Similar Research Groups |
ldaPrototype | Prototype of Multiple Latent Dirichlet Allocation Runs |
ldat | Large Data Sets |
LDATS | Latent Dirichlet Allocation Coupled with Time Series Analyses |
ldatuning | Tuning of the Latent Dirichlet Allocation Models Parameters |
LDAvis | Interactive Visualization of Topic Models |
ldbod | Local Density-Based Outlier Detection |
ldbounds | Lan-DeMets Method for Group Sequential Boundaries |
LDcorSV | Linkage Disequilibrium Corrected by the Structure and the Relatedness |
ldhmm | Hidden Markov Model for Financial Time-Series Based on Lambda Distribution |
LDlinkR | An R Package for Calculating Linkage Disequilibrium |
LDOD | Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models |
LDPD | Probability of Default Calibration |
ldr | Methods for likelihood-based dimension reduction in regression |
LDRTools | Tools for Linear Dimension Reduction |
ldsep | Linkage Disequilibrium Shrinkage Estimation for Polyploids |
ldsr | Linear Dynamical System Reconstruction |
LDtests | Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium |
leabRa | The Artificial Neural Networks Algorithm Leabra |
leaderCluster | Leader Clustering Algorithm |
LeafArea | Rapid Digital Image Analysis of Leaf Area |
leafem | 'leaflet' Extensions for 'mapview' |
leafgl | High-Performance 'WebGl' Rendering for Package 'leaflet' |
leaflet | Create Interactive Web Maps with the JavaScript 'Leaflet' Library |
leaflet.esri | 'ESRI' Bindings for the 'leaflet' Package |
leaflet.extras | Extra Functionality for 'leaflet' Package |
leaflet.extras2 | Extra Functionality for 'leaflet' Package |
leaflet.minicharts | Mini Charts for Interactive Maps |
leaflet.opacity | Opacity Controls for Leaflet Maps |
leaflet.providers | Leaflet Providers |
leafletCN | An R Gallery for China and Other Geojson Choropleth Map in Leaflet |
leafletR | Interactive Web-Maps Based on the Leaflet JavaScript Library |
leafpm | Leaflet Map Plugin for Drawing and Editing |
leafpop | Include Tables, Images and Graphs in Leaflet Pop-Ups |
leafR | Calculates the Leaf Area Index (LAD) and Other Related Functions |
leafSTAR | Silhouette to Area Ratio of Tilted Surfaces |
leafsync | Small Multiples for Leaflet Web Maps |
leaftime | 'Leaflet-timeline' Plugin for Leaflet |
leanpubr | 'Leanpub' API Interface |
LEANR | Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes |
LEAP | Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering |
LEAPFrOG | Likelihood Estimation of Admixture in Parents From Offspring Genotypes |
leapp | latent effect adjustment after primary projection |
leaps | Regression Subset Selection |
LeArEst | Border and Area Estimation of Data Measured with Additive Error |
LearnBayes | Functions for Learning Bayesian Inference |
LearnGeom | Learning Plane Geometry |
learningr | Data and Functions to Accompany the Book "Learning R" |
LearningRlab | Statistical Learning Functions |
learNN | Examples of Neural Networks |
learnPopGen | Population Genetic Simulations & Numerical Analysis |
learnr | Interactive Tutorials for R |
learnrbook | Datasets for Aphalo's "Learn R" Book |
learnstats | An Interactive Environment for Learning Statistics |
leastcostpath | Modelling Pathways and Movement Potential Within a Landscape (Version 1.7.4) |
ledger | Utilities for Importing Data from Plain Text Accounting Files |
leerSIECyL | Read Data from the SIE |
lefko3 | Historical and Ahistorical Population Projection Matrix Analysis |
legco | Accessing Hong Kong Legislative Council API |
legislatoR | Interface to the Comparative Legislators Database |
LEGIT | Latent Environmental & Genetic InTeraction (LEGIT) Model |
legocolors | Official Lego Color Palettes |
leiden | R Implementation of Leiden Clustering Algorithm |
leiv | Bivariate Linear Errors-In-Variables Estimation |
LeMaRns | Length-Based Multispecies Analysis by Numerical Simulation |
lemon | Freshing Up your 'ggplot2' Plots |
lenses | Elegant Data Manipulation with Lenses |
leri | Access Landscape Evaporative Response Index Raster Data |
lero.lero | Generate 'Lero Lero' Quotes |
lessR | Less Code, More Results |
lest | Vectorised Nested if-else Statements Similar to CASE WHEN in 'SQL' |
lestat | A Package for Learning Statistics |
letsR | Data Handling and Analysis in Macroecology |
lexicon | Lexicons for Text Analysis |
lexiconPT | Lexicons for Portuguese Text Analysis |
LexisNexisTools | Working with Files from 'LexisNexis' |
LexisPlotR | Plot Lexis Diagrams for Demographic Purposes |
lexRankr | Extractive Summarization of Text with the LexRank Algorithm |
lfactors | Factors with Levels |
lfda | Local Fisher Discriminant Analysis |
LFDR.MLE | Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation |
LFDREmpiricalBayes | Estimating Local False Discovery Rates Using Empirical Bayes Methods |
lfe | Linear Group Fixed Effects |
lfl | Linguistic Fuzzy Logic |
lfmm | Latent Factor Mixed Models |
lfstat | Calculation of Low Flow Statistics for Daily Stream Flow Data |
lg | Locally Gaussian Distributions: Estimation and Methods |
lgarch | Simulation and Estimation of Log-GARCH Models |
lgcp | Log-Gaussian Cox Process |
LGEWIS | Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies |
lgr | A Fully Featured Logging Framework |
lgrdata | Example Datasets for a Learning Guide to R |
LGRF | Set-Based Tests for Genetic Association in Longitudinal Studies |
lgtdl | A Set of Methods for Longitudinal Data Objects |
LHD | Latin Hypercube Designs (LHDs) Algorithms |
lhmixr | Fit Sex-Specific Life History Models with Missing Classifications |
lhs | Latin Hypercube Samples |
liayson | Linking Singe-Cell Transcriptomes Atween Contemporary Subpopulation Genomes |
libcoin | Linear Test Statistics for Permutation Inference |
libgeos | Open Source Geometry Engine ('GEOS') C API |
LiblineaR | Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library |
LiblineaR.ACF | Linear Classification with Online Adaptation of Coordinate Frequencies |
LibOPF | Design of Optimum-Path Forest Classifiers |
Libra | Linearized Bregman Algorithms for Generalized Linear Models |
librarian | Install, Update, Load Packages from CRAN, 'GitHub', and 'Bioconductor' in One Step |
librarysnapshot | Library Snapshot for Packages and Dependencies in Use by Current Session |
libsoc | Read, Create and Write 'PharmML' Standard Output (so) XML Files |
libstableR | Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions |
LICORS | Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data |
lidR | Airborne LiDAR Data Manipulation and Visualization for Forestry Applications |
lifecontingencies | Financial and Actuarial Mathematics for Life Contingencies |
lifecourse | Quantification of Lifecourse Fluidity |
lifecycle | Manage the Life Cycle of your Package Functions |
LifeHist | Life History Models of Individuals |
lifelogr | Life Logging |
LifeTables | Two-Parameter HMD Model Life Table System |
lift | Compute the Top Decile Lift and Plot the Lift Curve |
liftLRD | Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series |
liftr | Containerize R Markdown Documents for Continuous Reproducibility |
lifx | Control 'LIFX' Smart Light Bulbs |
liger | Lightweight Iterative Geneset Enrichment |
LightningR | Tools for Communication with Lightning-Viz Server |
lightr | Read Spectrometric Data and Metadata |
lightsout | Implementation of the 'Lights Out' Puzzle Game |
LIHNPSD | Poisson Subordinated Distribution |
likelihood | Methods for Maximum Likelihood Estimation |
likelihoodAsy | Functions for Likelihood Asymptotics |
likelihoodExplore | Likelihood Exploration |
likeLTD | Tools to Evaluate DNA Profile Evidence |
likert | Analysis and Visualization Likert Items |
lillies | Estimation of Life Years Lost |
LilRhino | For Implementation of Feed Reduction, Learning Examples, NLP and Code Management |
LIM | Linear Inverse Model examples and solution methods |
lime | Local Interpretable Model-Agnostic Explanations |
limitplot | Jitter/CI Plot with Ordered Points Below the Limit of Detection |
limSolve | Solving Linear Inverse Models |
lin.eval | Perform Polynomial Evaluation of Linearity |
linbin | Binning and Plotting of Linearly Referenced Data |
LinCal | Static Univariate Frequentist and Bayesian Linear Calibration |
LindenmayeR | Functions to Explore L-Systems (Lindenmayer Systems) |
lindia | Automated Linear Regression Diagnostic |
LindleyPowerSeries | Lindley Power Series Distribution |
LindleyR | The Lindley Distribution and Its Modifications |
linear.tools | Manipulate Formulas and Evaluate Marginal Effects |
linearOrdering | Methods of Linear Ordering of Data |
linearQ | Linear Algorithm for Simulating Quantiles in Multiscale Change-Point Segmentation Problem |
LinearRegressionMDE | Minimum Distance Estimation in Linear Regression Model |
lineartestr | Linear Specification Testing |
linemap | Line Maps |
lineqGPR | Gaussian Process Regression Models with Linear Inequality Constraints |
linERR | Linear Excess Relative Risk Model |
lineup | Lining Up Two Sets of Measurements |
lingtypology | Linguistic Typology and Mapping |
linguisticsdown | Easy Linguistics Document Writing with R Markdown |
link2GI | Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools |
LinkageMapView | Plot Linkage Group Maps with Quantitative Trait Loci |
linkcomm | Tools for Generating, Visualizing, and Analysing Link Communities in Networks |
LinkedGASP | Linked Emulator of a Coupled System of Simulators |
LinkedMatrix | Column-Linked and Row-Linked Matrices |
linkim | Linkage information based genotype imputation method |
linkprediction | Link Prediction Methods |
linkR | 3D Lever and Linkage Mechanism Modeling |
linkspotter | Bivariate Correlations Calculation and Visualization |
linl | 'linl' is not 'Letter' |
linLIR | linear Likelihood-based Imprecise Regression |
linpk | Generate Concentration-Time Profiles from Linear PK Systems |
linprog | Linear Programming / Optimization |
LinRegInteractive | Interactive Interpretation of Linear Regression Models |
LINselect | Selection of Linear Estimators |
lintools | Manipulation of Linear Systems of (in)Equalities |
lintr | A 'Linter' for R Code |
LipidMS | Lipid Annotation for LC-MS/MS DIA Data |
LipidMSdata | 'LipidMS' Data |
lipidomeR | Integrative Visualizations of the Lipidome |
liqueueR | Implements Queue, PriorityQueue and Stack Classes |
liquidSVM | A Fast and Versatile SVM Package |
lira | LInear Regression in Astronomy |
lisa | Color Palettes from Color Lisa |
lisp | List-processing à la SRFI-1 |
lisrelToR | Import output from LISREL into R |
list | Statistical Methods for the Item Count Technique and List Experiment |
listarrays | A Toolbox for Working with R Arrays in a Functional Programming Style |
listcomp | List Comprehensions |
listdown | Create R Markdown from Lists |
listdtr | List-Based Rules for Dynamic Treatment Regimes |
listenv | Environments Behaving (Almost) as Lists |
LIStest | Tests of independence based on the Longest Increasing Subsequence |
listviewer | 'htmlwidget' for Interactive Views of R Lists |
listWithDefaults | List with Defaults |
liteq | Lightweight Portable Message Queue Using 'SQLite' |
litteR | Litter Analysis |
littler | R at the Command-Line via 'r' |
liureg | Liu Regression with Liu Biasing Parameters and Statistics |
live | Local Interpretable (Model-Agnostic) Visual Explanations |
livechatR | R Wrapper for LiveChat REST API |
ljr | Logistic Joinpoint Regression |
llama | Leveraging Learning to Automatically Manage Algorithms |
llbayesireg | The L-Logistic Bayesian Regression |
lle | Locally linear embedding |
lllcrc | Local Log-linear Models for Capture-Recapture |
LLM | Logit Leaf Model Classifier for Binary Classification |
llogistic | The L-Logistic Distribution |
LLSR | Data Analysis of Liquid-Liquid Systems using R |
lm.beta | Add Standardized Regression Coefficients to lm-Objects |
lm.br | Linear Model with Breakpoint |
lmboot | Bootstrap in Linear Models |
lmds | Landmark Multi-Dimensional Scaling |
lme4 | Linear Mixed-Effects Models using 'Eigen' and S4 |
lmec | Linear Mixed-Effects Models with Censored Responses |
lmeInfo | Information Matrices for 'lmeStruct' and 'glsStruct' Objects |
lmem.qtler | Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis |
lmeNB | Compute the Personalized Activity Index Based on a Negative Binomial Model |
lmeNBBayes | Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model |
LMERConvenienceFunctions | Model Selection and Post-hoc Analysis for (G)LMER Models |
lmeresampler | Bootstrap Methods for Nested Linear Mixed-Effects Models |
lmerTest | Tests in Linear Mixed Effects Models |
lmeSplines | Add smoothing spline modelling capability to nlme |
LMest | Generalized Latent Markov Models |
lmeVarComp | Testing for a Subset of Variance Components in Linear Mixed Models |
lmf | Functions for estimation and inference of selection in age-structured populations |
LMfilteR | Filter Methods for Parameter Estimation in Linear Regression Models |
lmfor | Functions for Forest Biometrics |
lmm | Linear Mixed Models |
lmmot | Multiple Ordinal Tobit (MOT) Model |
lmmpar | Parallel Linear Mixed Model |
lmms | Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data |
lmodel2 | Model II Regression |
lmom | L-Moments |
lmomco | L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions |
Lmoments | L-Moments and Quantile Mixtures |
lmomPi | (Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom' |
lmomRFA | Regional Frequency Analysis using L-Moments |
lmPerm | Permutation Tests for Linear Models |
lmQCM | An Algorithm for Gene Co-Expression Analysis |
lmreg | Data and Functions Used in Linear Models and Regression with R: An Integrated Approach |
lmridge | Linear Ridge Regression with Ridge Penalty and Ridge Statistics |
lmSubsets | Exact Variable-Subset Selection in Linear Regression |
lmSupport | Support for Linear Models |
lmtest | Testing Linear Regression Models |
lmtp | Non-Parametric Causal Effects of Feasible Interventions Based on Modified Treatment Policies |
lmvar | Linear Regression with Non-Constant Variances |
lmviz | A Package to Visualize Linear Models Features and Play with Them |
LN0SCIs | Simultaneous CIs for Ratios of Means of Log-Normal Populations with Zeros |
lncDIFF | Long Non-Coding RNA Differential Expression Analysis |
LncFinder | LncRNA Identification and Analysis Using Heterologous Features |
LncMod | Predicting Modulator and Functional/Survival Analysis |
LncPath | Identifying the Pathways Regulated by LncRNA Sets of Interest |
LNIRT | LogNormal Response Time Item Response Theory Models |
loa | Lattice Options and Add-Ins |
loadr | Cleaner Workspaces with Shared Variable Environments |
lobstr | Visualize R Data Structures with Trees |
LocalControl | Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence |
LocalControlStrategy | Local Control Strategy for Robust Analysis of Cross-Sectional Data |
localgauss | Estimating Local Gaussian Parameters |
localICE | Local Individual Conditional Expectation |
localIV | Estimation of Marginal Treatment Effects using Local Instrumental Variables |
localModel | LIME-Based Explanations with Interpretable Inputs Based on Ceteris Paribus Profiles |
localsolver | R API to LocalSolver |
locfdr | Computes Local False Discovery Rates |
LocFDRPois | Functions for Performing Local FDR Estimation when Null and Alternative are Poisson |
locfit | Local Regression, Likelihood and Density Estimation |
locits | Test of Stationarity and Localized Autocovariance |
Lock5Data | Datasets for "Statistics: UnLocking the Power of Data" |
Lock5withR | Datasets for 'Statistics: Unlocking the Power of Data' |
locpol | Kernel Local Polynomial Regression |
locStra | Fast Implementation of (Local) Population Stratification Methods |
loder | Dependency-Free Access to PNG Image Files |
lodGWAS | Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection |
lodi | Limit of Detection Imputation for Single-Pollutant Models |
lodr | Linear Model Fitting with LOD Covariates |
loe | Local Ordinal Embedding |
loewesadditivity | Loewe's Additivity |
log4r | A Fast and Lightweight Logging System for R, Based on 'log4j' |
LOGAN | Log File Analysis in International Large-Scale Assessments |
logbin | Relative Risk Regression Using the Log-Binomial Model |
LogConcDEAD | Log-Concave Density Estimation in Arbitrary Dimensions |
logconcens | Maximum Likelihood Estimation of a log-Concave Density Based on Censored Data |
logcondens | Estimate a Log-Concave Probability Density from Iid Observations |
logcondens.mode | Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode |
logcondiscr | Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations |
logger | A Lightweight, Modern and Flexible Logging Utility |
logging | R Logging Package |
loggit | Modern Logging for the R Ecosystem |
logiBin | Binning Variables to Use in Logistic Regression |
LOGICOIL | LOGICOIL: multi-state prediction of coiled-coil oligomeric state |
LogicReg | Logic Regression |
logihist | Combined Graphs for Logistic Regression |
logistf | Firth's Bias-Reduced Logistic Regression |
logistic4p | Logistic Regression with Misclassification in Dependent Variables |
LogisticDx | Diagnostic Tests for Models with a Binomial Response |
logisticPCA | Binary Dimensionality Reduction |
logisticRR | Adjusted Relative Risk from Logistic Regression |
LogitNet | Infer network based on binary arrays using regularized logistic regression |
logitnorm | Functions for the Logitnormal Distribution |
logKDE | Computing Log-Transformed Kernel Density Estimates for Positive Data |
loglognorm | Double log normal distribution functions |
logmult | Log-Multiplicative Models, Including Association Models |
lognorm | Functions for the Lognormal Distribution |
logNormReg | log Normal Linear Regression |
logOfGamma | Natural Logarithms of the Gamma Function for Large Values |
logr | Creates Log Files |
LogrankA | Logrank Test for Aggregated Survival Data |
LogrankPower | Log-Rank Test Power Calculation |
logspline | Routines for Logspline Density Estimation |
lokern | Kernel Regression Smoothing with Local or Global Plug-in Bandwidth |
lolog | Latent Order Logistic Graph Models |
lolR | Linear Optimal Low-Rank Projection |
lomb | Lomb-Scargle Periodogram |
LongCART | Recursive Partitioning for Longitudinal Data and Right Censored Data Using Baseline Covariates |
longCatEDA | Package for Plotting Categorical Longitudinal and Time-Series Data |
longclust | Model-Based Clustering and Classification for Longitudinal Data |
longitudinal | Analysis of Multiple Time Course Data |
longitudinalcascade | Longitudinal Cascade |
longitudinalData | Longitudinal Data |
longmemo | Statistics for Long-Memory Processes (Book Jan Beran), and Related Functionality |
LongMemoryTS | Long Memory Time Series |
longpower | Sample Size Calculations for Longitudinal Data |
longROC | Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores |
longRPart2 | Recursive Partitioning of Longitudinal Data |
longurl | Expand Short 'URLs' |
loo | Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models |
lookupTable | Look-Up Tables using S4 |
loon | Interactive Statistical Data Visualization |
loon.data | Data Used to Illustrate 'Loon' Functionality |
loon.ggplot | Making 'ggplot2' Plots Interactive with 'loon' and Vice Versa |
loop | loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology |
LoopAnalyst | A Collection of Tools to Conduct Levins' Loop Analysis |
LoopDetectR | Comprehensive Feedback Loop Detection in ODE Models |
loopr | Uses an Archive to Amend Previous Stages of a Pipe using Current Output |
LoopRig | Integration and Analysis of Chromatin Loop Data |
loose.rock | Tools for Survival Analysis and Data Science |
LOPART | Labeled Optimal Partitioning |
lordif | Logistic Ordinal Regression Differential Item Functioning using IRT |
lorec | LOw Rand and sparsE Covariance matrix estimation |
lorentz | The Lorentz Transform in Relativistic Physics |
lori | Imputation of Count Data using Side Information |
LOST | Missing Morphometric Data Simulation and Estimation |
LotkasLaw | Runs Lotka's Law which is One of the Special Applications of Zipf's Law |
lotri | A Simple Way to Specify Symmetric, Block Diagonal Matrices |
lowmemtkmeans | Low Memory Use Trimmed K-Means |
lowpassFilter | Lowpass Filtering |
LowRankQP | Low Rank Quadratic Programming |
LowWAFOMNX | Low WAFOM Niederreiter-Xing Sequence |
LowWAFOMSobol | Low WAFOM Sobol Sequence |
LPBkg | Detecting New Signals under Background Mismodelling |
lpbrim | LP-BRIM Bipartite Modularity |
lpc | Lassoed Principal Components for Testing Significance of Features |
LPCM | Local Principal Curve Methods |
lpdensity | Local Polynomial Density Estimation and Inference |
LPGraph | Nonparametric Smoothing of Laplacian Graph Spectra |
lpint | Local polynomial estimators of intensity function or its derivatives |
lpirfs | Local Projections Impulse Response Functions |
LPKsample | LP Nonparametric High Dimensional K-Sample Comparison |
lplyr | 'dplyr' Verbs for Lists and Other Verbs for Data Frames |
LPM | Linear Parametric Models Applied to Hydrological Series |
lpme | Nonparametric Estimation of Measurement Error Models |
LPmerge | Merging Linkage Maps by Linear Programming |
lpmodeler | Modeler for linear programs (LP) and mixed integer linear programs (MILP) |
LPower | Calculates Power, Sample Size, or Detectable Effect for Longitudinal Analyses |
LPRelevance | Relevance-Integrated Statistical Inference Engine |
lpridge | Local Polynomial (Ridge) Regression |
LPS | Linear Predictor Score, for Binary Inference from Multiple Continuous Variables |
lpSolve | Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs |
lpSolveAPI | R Interface to 'lp_solve' Version 5.5.2.0 |
LPStimeSeries | Learned Pattern Similarity and Representation for Time Series |
LPTime | LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling |
LPWC | Lag Penalized Weighted Correlation for Time Series Clustering |
lqmm | Linear Quantile Mixed Models |
lqr | Robust Linear Quantile Regression |
LRcontrast | Dose Response Signal Detection under Model Uncertainty |
lrequire | Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars |
lrgs | Linear Regression by Gibbs Sampling |
lrmest | Different Types of Estimators to Deal with Multicollinearity |
LRQMM | Fitting Linear Quantile Regression Mixed Models with Relationship Matrix |
LRTH | A Likelihood Ratio Test Accounting for Genetic Heterogeneity |
LS2W | Locally Stationary Two-Dimensional Wavelet Process Estimation Scheme |
LS2Wstat | A Multiscale Test of Spatial Stationarity for LS2W Processes |
lsa | Latent Semantic Analysis |
LSAfun | Applied Latent Semantic Analysis (LSA) Functions |
LSAmitR | Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R' |
lsasim | Functions to Facilitate the Simulation of Large Scale Assessment Data |
lsbclust | Least-Squares Bilinear Clustering for Three-Way Data |
lsbs | Bandwidth Selection for Level Sets and HDR Estimation |
LSC | Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data |
LSD | Lots of Superior Depictions |
lsdbc | Locally Scaled Density Based Clustering |
LSDinterface | Reading LSD Results (.res) Files |
LSDsensitivity | Sensitivity Analysis Tools for LSD |
lsdv | Least square dummy variable regression |
lshorth | The Length of the Shorth |
lsl | Latent Structure Learning |
lslx | Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood or Least Squares |
lsm | Estimation of the log Likelihood of the Saturated Model |
lsmeans | Least-Squares Means |
LSMonteCarlo | American options pricing with Least Squares Monte Carlo method |
lspartition | Nonparametric Estimation and Inference Procedures using Partitioning-Based Least Squares Regression |
LSPFP | Lysate and Secretome Peptide Feature Plotter |
lspline | Linear Splines with Convenient Parametrisations |
lspls | LS-PLS Models |
lsplsGlm | Classification using LS-PLS for Logistic Regression |
lsr | Companion to "Learning Statistics with R" |
LSRS | Land Surface Remote Sensing |
lss2 | The Accelerated Failure Time Model to Right Censored Data Based on Least-Squares Principle |
ltable | Easy to Make (Lazy) Tables |
ltbayes | Simulation-Based Bayesian Inference for Latent Traits of Item Response Models |
ltm | Latent Trait Models under IRT |
ltmix | Left-Truncated Mixtures of Gamma, Weibull, and Lognormal Distributions |
ltmle | Longitudinal Targeted Maximum Likelihood Estimation |
LTPDvar | LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables |
LTRCforests | Ensemble Methods for Survival Data with Time-Varying Covariates |
LTRCtrees | Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data |
ltsa | Linear Time Series Analysis |
ltsbase | Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method |
ltsk | Local Time Space Kriging |
ltsspca | Sparse Principal Component Based on Least Trimmed Squares |
ltxsparklines | Lightweight Sparklines for a LaTeX Document |
lubridate | Make Dealing with Dates a Little Easier |
lucid | Printing Floating Point Numbers in a Human-Friendly Format |
LUCIDus | Latent Unknown Clustering with Integrated Data |
ludic | Linkage Using Diagnosis Codes |
lue | Light Use Efficiency Model to Estimate Biomass and YIELD with and Without Vapour Pressure Deficit |
lulcc | Land Use Change Modelling in R |
lumberjack | Track Changes in Data |
Luminescence | Comprehensive Luminescence Dating Data Analysis |
lunar | Lunar Phase & Distance, Seasons and Other Environmental Factors |
lutz | Look Up Time Zones of Point Coordinates |
luzlogr | Lightweight Logging for R Scripts |
lvec | Out of Memory Vectors |
LVGP | Latent Variable Gaussian Process Modeling with Qualitative and Quantitative Input Variables |
lvm4net | Latent Variable Models for Networks |
lvmcomp | Stochastic EM Algorithms for Latent Variable Models with a High-Dimensional Latent Space |
lvnet | Latent Variable Network Modeling |
lvplot | Letter Value 'Boxplots' |
LW1949 | An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949) |
lwgeom | Bindings to Selected 'liblwgeom' Functions for Simple Features |
lxb | Fast LXB File Reader |
lymphclon | Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates |
LZeroSpikeInference | Exact Spike Train Inference via L0 Optimization |
m2b | Movement to Behaviour Inference using Random Forest |
m2r | Interface to 'Macaulay2' |
M2SMF | Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis |
M3 | Reading M3 files |
mable | Maximum Approximate Bernstein/Beta Likelihood Estimation |
maboost | Binary and Multiclass Boosting Algorithms |
MAc | Meta-Analysis with Correlations |
macc | Mediation Analysis of Causality under Confounding |
machina | Machina Time Series Generation and Backtesting |
MachineShop | Machine Learning Models and Tools |
machQA | QA Machina Indicators |
macleish | Retrieve Data from MacLeish Field Station |
MAclinical | Class prediction based on microarray data and clinical parameters |
MAd | Meta-Analysis with Mean Differences |
mada | Meta-Analysis of Diagnostic Accuracy |
maddison | Maddison Project Database |
maditr | Fast Data Aggregation, Modification, and Filtering with Pipes and 'data.table' |
madness | Automatic Differentiation of Multivariate Operations |
MADPop | MHC Allele-Based Differencing Between Populations |
madr | Model Averaged Double Robust Estimation |
madrat | May All Data be Reproducible and Transparent (MADRaT) * |
mads | Multi-Analysis Distance Sampling |
madsim | A Flexible Microarray Data Simulation Model |
Maeswrap | Wrapper Functions for MAESTRA/MAESPA |
mafs | Multiple Automatic Forecast Selection |
magclass | Data Class and Tools for Handling Spatial-Temporal Data |
magic | Create and Investigate Magic Squares |
magicaxis | Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support |
magicfor | Magic Functions to Obtain Results from for Loops |
magick | Advanced Graphics and Image-Processing in R |
magickGUI | GUI Tools for Interactive Image Processing with 'magick' |
magicLamp | 'WeMo Switch' Smart Plug Utilities |
MAGNAMWAR | A Pipeline for Meta-Genome Wide Association |
magree | Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers |
magrittr | A Forward-Pipe Operator for R |
maGUI | A Graphical User Interface for Microarray Data Analysis and Annotation |
maic | Matching-Adjusted Indirect Comparison |
Sending Email Notifications from R | |
mailR | A Utility to Send Emails from R |
mailtoR | Creates a Friendly User Interface for Emails Sending in 'shiny' |
MAINT.Data | Model and Analyse Interval Data |
majesticR | R Interface to Access the 'Majestic' API |
MajKMeans | k-Means Algorithm with a Majorization-Minimization Method |
makedummies | Create Dummy Variables from Categorical Data |
MakefileR | Create 'Makefiles' Using R |
makeFlow | Visualizing Sequential Classifications |
makeProject | Creates an empty package framework for the LCFD format |
maketools | Exploring and Testing the Toolchain and System Libraries |
malan | MAle Lineage ANalysis |
malani | Machine Learning Assisted Network Inference |
malariaAtlas | An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atlas Project' |
MALDIquant | Quantitative Analysis of Mass Spectrometry Data |
MALDIquantForeign | Import/Export Routines for 'MALDIquant' |
mallet | A wrapper around the Java machine learning tool MALLET |
MAMS | Designing Multi-Arm Multi-Stage Studies |
MAMSE | Calculation of Minimum Averaged Mean Squared Error (MAMSE) Weights |
managelocalrepo | Manage a CRAN-Style Local Repository |
MANCIE | Matrix Analysis and Normalization by Concordant Information Enhancement |
mand | Multivariate Analysis for Neuroimaging Data |
mandelbrot | Generates Views on the Mandelbrot Set |
manet | Multiple Allocation Model for Actor-Event Networks |
mangoTraining | Mango Solutions Training Datasets |
Mangrove | Risk Prediction on Trees |
manhattanly | Interactive Q-Q and Manhattan Plots Using 'plotly.js' |
manhplot | The Manhattan++ Plot |
manifestoR | Access and Process Data and Documents of the Manifesto Project |
ManifoldOptim | An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization |
manipulate | Interactive Plots for RStudio |
manipulateWidget | Add Even More Interactivity to Interactive Charts |
ManlyMix | Manly Mixture Modeling and Model-Based Clustering |
MANOVA.RM | Resampling-Based Analysis of Multivariate Data and Repeated Measures Designs |
manymodelr | Build and Tune Several Models |
ManyTests | Multiple Testing Procedures of Cox (2011) and Wong and Cox (2007) |
MaOEA | Many Objective Evolutionary Algorithm |
maotai | Tools for Matrix Algebra, Optimization and Inference |
MAP | Multimodal Automated Phenotyping |
Map2NCBI | Mapping Markers to the Nearest Genomic Feature |
MAPA | Multiple Aggregation Prediction Algorithm |
mapcan | Tools for Plotting Canadian Choropleth Maps and Choropleth Alternatives |
mapdata | Extra Map Databases |
mapdeck | Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl' |
mapedit | Interactive Editing of Spatial Data in R |
mapfit | A Tool for PH/MAP Parameter Estimation |
MapGAM | Mapping Smoothed Effect Estimates from Individual-Level Data |
mapi | Mapping Averaged Pairwise Information |
Mapinguari | Process-Based Biogeographical Analysis |
MAPLES | Smoothed age profile estimation |
mapmisc | Utilities for Producing Maps |
mapplots | Data Visualisation on Maps |
mapproj | Map Projections |
mapr | Visualize Species Occurrence Data |
mapReasy | Producing Administrative Boundary Map with Additional Features Embedded |
maps | Draw Geographical Maps |
mapsapi | 'sf'-Compatible Interface to 'Google Maps' APIs |
mapsFinland | Maps of Finland |
mapsRinteractive | Local Adaptation and Evaluation of Digital Soil Maps |
mapStats | Geographic Display of Survey Data Statistics |
maptools | Tools for Handling Spatial Objects |
maptpx | MAP Estimation of Topic Models |
maptree | Mapping, pruning, and graphing tree models |
mapview | Interactive Viewing of Spatial Data in R |
mAr | Multivariate AutoRegressive analysis |
mar1s | Multiplicative AR(1) with Seasonal Processes |
march | Markov Chains |
marcher | Migration and Range Change Estimation in R |
marelac | Tools for Aquatic Sciences |
MareyMap | Estimation of Meiotic Recombination Rates Using Marey Maps |
marg | Approximate Marginal Inference for Regression-Scale Models |
MargCond | Joint Marginal-Conditional Model |
MarginalMediation | Marginal Mediation |
margins | Marginal Effects for Model Objects |
marima | Multivariate ARIMA and ARIMA-X Analysis |
marindicators | Marine Ecosystem and Fishing Pressure Indicators |
markdown | Render Markdown with the C Library 'Sundown' |
markdownInput | Shiny Module for a Markdown Input with Result Preview |
marked | Mark-Recapture Analysis for Survival and Abundance Estimation |
MarketMatching | Market Matching and Causal Impact Inference |
marketr | Tidy Calculation of Marketing Metrics Plus Quick Analysis |
markmyassignment | Automatic Marking of R Assignments |
markophylo | Markov Chain Models for Phylogenetic Trees |
markovchain | Easy Handling Discrete Time Markov Chains |
Markovchart | Markov Chain-Based Cost-Optimal Control Charts |
MarkowitzR | Statistical Significance of the Markowitz Portfolio |
marl | Multivariate Analysis Based on Relative Likelihoods |
marmap | Import, Plot and Analyze Bathymetric and Topographic Data |
marqLevAlg | A Parallelized General-Purpose Optimization Based on Marquardt-Levenberg Algorithm |
MARSS | Multivariate Autoregressive State-Space Modeling |
MARX | Simulation, Estimation, Model Selection and Forecasting for MARX Models |
maSAE | Mandallaz' Model-Assisted Small Area Estimators |
mase | Model-Assisted Survey Estimators |
mashr | Multivariate Adaptive Shrinkage |
MaskJointDensity | Masking, Unmasking and Restoring Confidential Data |
mason | Build Data Structures for Common Statistical Analysis |
MASS | Support Functions and Datasets for Venables and Ripley's MASS |
Massign | Simple Matrix Construction |
MASSTIMATE | Body Mass Estimation Equations for Vertebrates |
MasterBayes | ML and MCMC Methods for Pedigree Reconstruction and Analysis |
MAT | Multidimensional Adaptive Testing |
MATA | Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval |
matahari | Spy on Your R Session |
match2C | Match One Sample using Two Criteria |
matchbook | Wrapper for the 'Matchbook' API |
Matching | Multivariate and Propensity Score Matching with Balance Optimization |
matchingMarkets | Analysis of Stable Matchings |
matchingR | Matching Algorithms in R and C++ |
MatchIt | Nonparametric Preprocessing for Parametric Causal Inference |
MatchLinReg | Combining Matching and Linear Regression for Causal Inference |
matchmaker | Flexible Dictionary-Based Cleaning |
matchMulti | Optimal Multilevel Matching using a Network Algorithm |
MatchThem | Matching and Weighting Multiply Imputed Datasets |
matconv | A Code Converter from the Matlab/Octave Language to R |
mateable | Tools to Assess Mating Potential in Space and Time |
mathgraph | Directed and Undirected Graphs |
mathjaxr | Using 'Mathjax' in Rd Files |
mathpix | Support for the 'Mathpix' API (Image to 'LaTeX') |
matie | Measuring Association and Testing Independence Efficiently |
matlab | MATLAB emulation package |
matlabr | An Interface for MATLAB using System Calls |
matlib | Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics |
matman | Material Management |
MatManlyMix | Matrix Clustering with Gaussian and Manly Mixture Models |
matpow | matrix powers |
matR | Metagenomics Analysis Tools |
matricks | Useful Tricks for Matrix Manipulation |
Matrix | Sparse and Dense Matrix Classes and Methods |
Matrix.utils | Data.frame-Like Operations on Sparse and Dense Matrix Objects |
matrixcalc | Collection of functions for matrix calculations |
MatrixCorrelation | Matrix Correlation Coefficients |
MatrixEQTL | Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations |
matrixLaplacian | Normalized Laplacian Matrix and Laplacian Map |
MatrixLDA | Penalized Matrix-Normal Linear Discriminant Analysis |
MatrixModels | Modelling with Sparse And Dense Matrices |
matrixNormal | The Matrix Normal Distribution |
matrixProfile | Matrix Profile |
matrixsampling | Simulations of Matrix Variate Distributions |
matrixStats | Functions that Apply to Rows and Columns of Matrices (and to Vectors) |
matrixStrucTest | Tests of Matrix Structure for Construct Validation |
matrixTests | Fast Statistical Hypothesis Tests on Rows and Columns of Matrices |
matsbyname | An Implementation of Matrix Mathematics |
matsindf | Matrices in Data Frames |
MatSkew | Matrix Skew-T Parameter Estimation |
MATTOOLS | Modern Calibration Functions for the Modern Analog Technique (MAT) |
MatTransMix | Clustering with Matrix Gaussian and Matrix Transformation Mixture Models |
mau | Decision Models with Multi Attribute Utility Theory |
MAVE | Methods for Dimension Reduction |
MAVIS | Meta Analysis via Shiny |
MAVTgsa | Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest |
MaXact | Exact max-type Cochran-Armitage trend test(CATT) |
maxadjAUC | Maximizing the Adjusted AUC |
MaxentVariableSelection | Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling |
maximin | Space-Filling Design under Maximin Distance |
maxLik | Maximum Likelihood Estimation and Related Tools |
maxlike | Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data |
maxmatching | Maximum Matching for General Weighted Graph |
MaxMC | Maximized Monte Carlo |
maxnet | Fitting 'Maxent' Species Distribution Models with 'glmnet' |
maxnodf | Approximate Maximisation of Nestedness in Bipartite Graphs |
MaxPro | Maximum Projection Designs |
MaxSkew | Orthogonal Data Projections with Maximal Skewness |
maxstat | Maximally Selected Rank Statistics |
maxTPR | Maximizing the TPR for a Specified FPR |
MazamaCoreUtils | Utility Functions for Production R Code |
MazamaLocationUtils | Manage Spatial Metadata for Known Locations |
MazamaSpatialUtils | Spatial Data Download and Utility Functions |
mazealls | Generate Recursive Mazes |
mazeGen | Elithorn Maze Generator |
mazeinda | Monotonic Association on Zero-Inflated Data |
MBA | Multilevel B-Spline Approximation |
mbbefd | Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling |
MBC | Multivariate Bias Correction of Climate Model Outputs |
MBCbook | Companion Package for the Book "Model-Based Clustering and Classification for Data Science" by Bouveyron et al. (2019, ISBN:9781108644181). |
MBCluster.Seq | Model-Based Clustering for RNA-seq Data |
mbclusterwise | Clusterwise Multiblock Analyses |
mbend | Matrix Bending |
MBESS | The MBESS R Package |
mbest | Moment-Based Estimation for Hierarchical Models |
MBHdesign | Spatial Designs for Ecological and Environmental Surveys |
MBI | (M)ultiple-site (B)iodiversity (I)ndices Calculator |
mbir | Magnitude-Based Inferences |
mblm | Median-Based Linear Models |
MBmca | Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R |
MBNMAdose | Run Dose-Response MBNMA Models |
MBNMAtime | Run Time-Course MBNMA Models |
mboost | Model-Based Boosting |
mboxr | Reading, Extracting, and Converting an Mbox File into a Tibble |
mbrglm | Median Bias Reduction in Binomial-Response GLMs |
MBSGS | Multivariate Bayesian Sparse Group Selection with Spike and Slab |
MBSP | Multivariate Bayesian Model with Shrinkage Priors |
mbsts | Multivariate Bayesian Structural Time Series |
mBvs | Bayesian Variable Selection Methods for Multivariate Data |
mc.heterogeneity | A Monte Carlo Based Heterogeneity Test for Meta-Analysis |
mc2d | Tools for Two-Dimensional Monte-Carlo Simulations |
MC2toPath | Translates information from netcdf files with MC2 output into inter-PVT transitions |
MCAvariants | Multiple Correspondence Analysis Variants |
mcb | Model Confidence Bounds |
MCBackscattering | Monte Carlo Simulation for Surface Backscattering |
mcBFtest | Monte Carlo Based Tests for the Behrens Fisher Problem as an Alternative to Welch's t-Approximation |
mcbiopi | Matrix Computation Based Identification of Prime Implicants |
mcc | Moment Corrected Correlation |
mcca | Multi-Category Classification Accuracy |
mccf1 | Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and the Best Threshold |
mcclust | Process an MCMC Sample of Clusterings |
mccmeiv | Analysis of Matched Case Control Data with a Mismeasured Exposure that is Accompanied by Instrumental Variables |
mccr | The Matthews Correlation Coefficient |
MCDA | Support for the Multicriteria Decision Aiding Process |
MCDM | Multi-Criteria Decision Making Methods for Crisp Data |
mcemGLM | Maximum Likelihood Estimation for Generalized Linear Mixed Models |
mcen | Multivariate Cluster Elastic Net |
mcga | Machine Coded Genetic Algorithms for Real-Valued Optimization Problems |
mcgfa | Mixtures of Contaminated Gaussian Factor Analyzers |
mcgibbsit | Warnes and Raftery's MCGibbsit MCMC diagnostic |
mcglm | Multivariate Covariance Generalized Linear Models |
mcGlobaloptim | Global optimization using Monte Carlo and Quasi Monte Carlo simulation |
mcheatmaps | Multiple matrices heatmap visualization |
MChtest | Monte Carlo Hypothesis Tests with Sequential Stopping |
MCI | Multiplicative Competitive Interaction (MCI) Model |
MCI2 | Market Area Models for Retail and Service Locations |
MCL | Markov Cluster Algorithm |
mclcar | Estimating Conditional Auto-Regressive (CAR) Models using Monte Carlo Likelihood Methods |
mcll | Monte Carlo Local Likelihood Estimation |
mclogit | Multinomial Logit Models, with or without Random Effects or Overdispersion |
mclust | Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation |
mclustcomp | Measures for Comparing Clusters |
mcmc | Markov Chain Monte Carlo |
MCMC.OTU | Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology |
MCMC.qpcr | Bayesian Analysis of qRT-PCR Data |
MCMC4Extremes | Posterior Distribution of Extreme Value Models in R |
mcmcderive | Derive MCMC Parameters |
MCMCglmm | MCMC Generalised Linear Mixed Models |
mcmcOutput | Functions to Store, Manipulate and Display Markov Chain Monte Carlo (MCMC) Output |
MCMCpack | Markov Chain Monte Carlo (MCMC) Package |
mcmcplots | Create Plots from MCMC Output |
MCMCprecision | Precision of Discrete Parameters in Transdimensional MCMC |
mcmcr | Manipulate MCMC Samples |
mcmcse | Monte Carlo Standard Errors for MCMC |
MCMCtreeR | Prepare MCMCtree Analyses and Plot Bayesian Divergence Time Analyses Estimates on Trees |
MCMCvis | Tools to Visualize, Manipulate, and Summarize MCMC Output |
mcMST | A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem |
mco | Multiple Criteria Optimization Algorithms and Related Functions |
Mcomp | Data from the M-Competitions |
mcompanion | Objects and Methods for Multi-Companion Matrices |
MConjoint | Conjoint Analysis through Averaging of Multiple Analyses |
mcp | Regression with Multiple Change Points |
mcPAFit | Estimating Preferential Attachment from a Single Network Snapshot by Markov Chain Monte Carlo |
MCPAN | Multiple Comparisons Using Normal Approximation |
mcparallelDo | A Simplified Interface for Running Commands on Parallel Processes |
MCPMod | Design and Analysis of Dose-Finding Studies |
MCPModGeneral | A Supplement to the 'DoseFinding' Package for the General Case |
MCPModPack | Simulation-Based Design and Analysis of Dose-Finding Trials |
mcprofile | Testing Generalized Linear Hypotheses for Generalized Linear Model Parameters by Profile Deviance |
mcr | Method Comparison Regression |
MCS | Model Confidence Set Procedure |
MCSim | Determine the Optimal Number of Clusters |
mcsm | Functions for Monte Carlo Methods with R |
McSpatial | Nonparametric spatial data analysis |
mcStats | Visualize Results of Statistical Hypothesis Tests |
mctest | Multicollinearity Diagnostic Measures |
MCTM | Markov Chains Transition Matrices |
mcunit | Unit Tests for MC Methods |
mcvis | Multi-Collinearity Visualization |
md | Selecting Bandwidth for Kernel Density Estimator with Minimum Distance Method |
md.log | Produces Markdown Log File with a Built-in Function Call |
mda | Mixture and Flexible Discriminant Analysis |
mDAG | Inferring Causal Network from Mixed Observational Data Using a Directed Acyclic Graph |
mdapack | Medical Data Analysis Pack |
mdatools | Multivariate Data Analysis for Chemometrics |
MDBED | Moran-Downton Bivariate Exponential Distribution |
mde | Missing Data Explorer |
mded | Measuring the Difference Between Two Empirical Distributions |
mdendro | Variable-Group Methods for Agglomerative Hierarchical Clustering |
MDFS | MultiDimensional Feature Selection |
mdftracks | Read and Write 'MTrackJ Data Files' |
mdhglm | Multivariate Double Hierarchical Generalized Linear Models |
MDimNormn | Multi-Dimensional MA Normalization for Plate Effect |
mdir.logrank | Multiple-Direction Logrank Test |
mdmb | Model Based Treatment of Missing Data |
MDMR | Multivariate Distance Matrix Regression |
mdpeer | Graph-Constrained Regression with Enhanced Regularization Parameters Selection |
MDplot | Visualising Molecular Dynamics Analyses |
MDPtoolbox | Markov Decision Processes Toolbox |
mds | Medical Devices Surveillance |
mdscore | Improved Score Tests for Generalized Linear Models |
mdsdt | Functions for Analysis of Data with General Recognition Theory |
MDSGUI | A GUI for interactive MDS in R |
MDSMap | High Density Genetic Linkage Mapping using Multidimensional Scaling |
mdsOpt | Searching for Optimal MDS Procedure for Metric and Interval-Valued Data |
MDSPCAShiny | Interactive Document for Working with Multidimensional Scaling and Principal Component Analysis |
mdsr | Complement to 'Modern Data Science with R' |
MDSS | Modeling Human Dentin Serial Sectioning |
mdthemes | Markdown Themes for 'ggplot2' |
mdw | Maximum Diversity Weighting |
meanr | Sentiment Analysis Scorer |
meanShiftR | A Computationally Efficient Mean Shift Implementation |
meantables | Make Quick Descriptive Tables for Continuous Variables |
meaRtools | Micro-Electro Array (MEA) Analysis |
measurements | Tools for Units of Measurement |
measures | Performance Measures for Statistical Learning |
measuRing | Detection and Control of Tree-Ring Widths on Scanned Image Sections |
meboot | Maximum Entropy Bootstrap for Time Series |
MEclustnet | Fit the Mixture of Experts Latent Position Cluster Model to Network Data |
MED | Mediation by Tilted Balancing |
MedDietCalc | Multi Calculator to Compute Scores of Adherence to Mediterranean Diet |
mederrRank | Bayesian Methods for Identifying the Most Harmful Medication Errors |
medExtractR | Extraction of Medication Information from Clinical Text |
medfate | Mediterranean Forest Simulation |
medflex | Flexible Mediation Analysis Using Natural Effect Models |
mediacloudr | Wrapper for the 'mediacloud.org' API |
MediaK | Calculate MeDiA_K Distance |
Mediana | Clinical Trial Simulations |
MediaNews | Media News Extraction for Text Analysis |
mediation | Causal Mediation Analysis |
mediationsens | Simulation-Based Sensitivity Analysis for Causal Mediation Studies |
medicalrisk | Medical Risk and Comorbidity Tools for ICD-9-CM Data |
medicare | Tools for Obtaining and Cleaning Medicare Public Use Files |
meditate | Meditation Timer |
meditations | Prints a Random Quote from Marcus Aurelius' Book Meditations |
MEDITS | Analysis of MEDITS-Like Survey Data |
medmod | Simple Mediation and Moderation Analysis |
MedOr | Median Ordering Statistical R package |
MEDseq | Mixtures of Exponential-Distance Models with Covariates |
MedSurvey | Mediation Analysis for Complex Surveys |
meetupapi | Access 'Meetup' API |
mefa | Multivariate Data Handling in Ecology and Biogeography |
mefa4 | Multivariate Data Handling with S4 Classes and Sparse Matrices |
Mega2R | Accessing and Processing a 'Mega2' Genetic Database |
MEGENA | Multiscale Clustering of Geometrical Network |
meifly | Interactive model exploration using GGobi |
mekko | Variable Width Bar Charts: Bar Mekko |
meltt | Matching Event Data by Location, Time and Type |
mem | The Moving Epidemic Method |
memapp | The Moving Epidemic Method Web Application |
meme | Create Meme |
memery | Internet Memes for Data Analysts |
memgene | Spatial Pattern Detection in Genetic Distance Data Using Moran's Eigenvector Maps |
memisc | Management of Survey Data and Presentation of Analysis Results |
memo | In-Memory Caching for Repeated Computations |
memochange | Testing for Structural Breaks under Long Memory and Testing for Changes in Persistence |
memoise | Memoisation of Functions |
memor | A 'rmarkdown' Template that Can be Highly Customized |
memoria | Quantifying Ecological Memory in Palaeoecological Datasets and Other Long Time-Series |
MEMSS | Data Sets from Mixed-Effects Models in S |
memuse | Memory Estimation Utilities |
MendelianRandomization | Mendelian Randomization Package |
MEPDF | Creation of Empirical Density Functions Based on Multivariate Data |
Mercator | Clustering and Visualizing Distance Matrices |
merDeriv | Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models |
mergedblocks | Merged Block Randomization |
mergeTrees | Aggregating Trees |
merlin | Mixed Effects Regression for Linear, Non-Linear and User-Defined Models |
merror | Accuracy and Precision of Measurements |
merTools | Tools for Analyzing Mixed Effect Regression Models |
MESS | Miscellaneous Esoteric Statistical Scripts |
messaging | Conveniently Issue Messages, Warnings, and Errors |
meta | General Package for Meta-Analysis |
meta4diag | Meta-Analysis for Diagnostic Test Studies |
MetaAnalyser | An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine |
MetABEL | Meta-analysis of genome-wide SNP association results |
metaBLUE | BLUE for Combining Location and Scale Information in a Meta-Analysis |
metaBMA | Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis |
metaboGSE | Gene Set Enrichment Analysis via Integration of Metabolic Networks and RNA-Seq Data |
MetabolAnalyze | Probabilistic Latent Variable Models for Metabolomic Data |
MetabolicSurv | A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature |
metabolighteR | Interface to the 'Metabolights' RESTful API |
MetaboList | Annotation of Metabolites from Liquid Chromatography-Mass Spectrometry Data |
MetabolomicsBasics | Basic Functions to Investigate Metabolomics Data Matrices |
MetaboLouise | METABOlomics LOngitudinal SimUlation Engine |
MetaboQC | Normalize Metabolomic Data using QC Signal |
metacart | Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis |
MetaClean | Detection of Low-Quality Peaks in Untargeted Metabolomics Data |
metacoder | Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data |
metacom | Analysis of the 'Elements of Metacommunity Structure' |
MetaComp | EDGE Taxonomy Assignments Visualization |
metacor | Meta-Analysis of Correlation Coefficients |
MetaCycle | Evaluate Periodicity in Large Scale Data |
metaDigitise | Extract and Summarise Data from Published Figures |
metadynminer | Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed' |
metadynminer3d | Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files from 'Plumed' |
metafolio | Metapopulation simulations for conserving salmon through portfolio optimization |
metafor | Meta-Analysis Package for R |
metaforest | Exploring Heterogeneity in Meta-Analysis using Random Forests |
metafuse | Fused Lasso Approach in Regression Coefficient Clustering |
metagam | Meta-Analysis of Generalized Additive Models |
metagear | Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis |
MetaheuristicFPA | An Implementation of Flower Pollination Algorithm in R |
metaheuristicOpt | Metaheuristic for Optimization |
MetaIntegrator | Meta-Analysis of Gene Expression Data |
MetaLandSim | Landscape and Range Expansion Simulation |
metaLik | Likelihood Inference in Meta-Analysis and Meta-Regression Models |
MetaLonDA | Metagenomics Longitudinal Differential Abundance Method |
metaMA | Meta-analysis for MicroArrays |
metamedian | Meta-Analysis of Medians |
metamer | Create Data with Identical Statistics |
metamisc | Diagnostic and Prognostic Meta-Analysis |
metaMix | Bayesian Mixture Analysis for Metagenomic Community Profiling |
metan | Multi Environment Trials Analysis |
metansue | Meta-Analysis of Studies with Non-Statistically Significant Unreported Effects |
metap | Meta-Analysis of Significance Values |
MetaPath | Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE) |
MetaPCA | MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data |
metaplot | Data-Driven Plot Design |
metaplotr | Creates CrossHairs Plots for Meta-Analyses |
metaplus | Robust Meta-Analysis and Meta-Regression |
metapost | Interface to 'MetaPost' |
metapower | Power Analysis for Meta-Analysis |
metapro | Robust P-Value Combination Methods |
metarep | Replicability-Analysis Tools for Meta-Analysis |
metaRMST | Meta-Analysis of RMSTD |
metaRNASeq | Meta-analysis of RNA-seq data |
metaSDTreg | Regression Models for Meta Signal Detection Theory |
metaSEM | Meta-Analysis using Structural Equation Modeling |
metasens | Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis |
MetaSKAT | Meta Analysis for SNP-Set (Sequence) Kernel Association Test |
MetaStan | Bayesian Meta-Analysis via 'Stan' |
MetaSubtract | Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results |
metatest | Fit and Test Metaregression Models |
metathis | HTML Metadata Tags for 'R Markdown' and 'Shiny' |
Metatron | Meta-analysis for Classification Data and Correction to Imperfect Reference |
MetaUtility | Utility Functions for Conducting and Interpreting Meta-Analyses |
metavcov | Variance-Covariance Matrix for Multivariate Meta-Analysis |
metaviz | Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis |
metawho | Meta-Analytical Implementation to Identify Who Benefits Most from Treatments |
meteo | Spatio-Temporal Analysis and Mapping of Meteorological Observations |
meteoForecast | Numerical Weather Predictions |
meteogRam | Tools for plotting meteograms |
meteoland | Landscape Meteorology Tools |
meteor | Meteorological Data Manipulation |
meteorits | Mixture-of-Experts Modeling for Complex Non-Normal Distributions |
meteR | Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE) |
MEtest | A Homogeneity Test under the Presence of Measurement Errors |
MetFns | Analysis of Visual Meteor Data |
MetGen | Stochastic Weather Generator |
Meth27QC | Meth27QC: sample quality analysis, and sample control analysis |
MethComp | Analysis of Agreement in Method Comparison Studies |
methcon5 | Identify and Rank CpG DNA Methylation Conservation Along the Human Genome |
MethodCompare | Bias and Precision Plots to Compare Two Measurements with Possibly Heteroscedastic Measurement Errors |
Methplot | Visualize the methylation patterns |
MethylCapSig | Detection of Differentially Methylated Regions using MethylCap-Seq Data |
MetNorm | Statistical Methods for Normalizing Metabolomics Data |
MeTo | Meteorological Tools |
metools | Macroeconomics Tools |
MetProc | Separate Metabolites into Likely Measurement Artifacts and True Metabolites |
metR | Tools for Easier Analysis of Meteorological Fields |
Metrics | Evaluation Metrics for Machine Learning |
metricsgraphics | Create Interactive Charts with the JavaScript 'MetricsGraphics' Library |
MetricsWeighted | Weighted Metrics, Scoring Functions and Performance Measures for Machine Learning |
metRology | Support for Metrological Applications |
metropolis | The Metropolis Algorithm |
mets | Analysis of Multivariate Event Times |
metScanR | Find, Map, and Gather Environmental Data and Metadata |
metsyn | Interface with the Meteo France Synop Data API |
mev | Multivariate Extreme Value Distributions |
mewAvg | A Fixed Memeory Moving Expanding Window Average |
mexhaz | Mixed Effect Excess Hazard Models |
mExplorer | Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data |
MF | Mitigated Fraction |
MFAg | Multiple Factor Analysis (MFA) |
mfbvar | Mixed-Frequency Bayesian VAR Models |
mfdb | MareFrame DB Querying Library |
MFDFA | MultiFractal Detrended Fluctuation Analysis |
mfe | Meta-Feature Extractor |
mfGARCH | Mixed-Frequency GARCH Models |
MFHD | Multivariate Functional Halfspace Depth |
mFilter | Miscellaneous Time Series Filters |
mFLICA | Leadership-Inference Framework for Multivariate Time Series |
mfp | Multivariable Fractional Polynomials |
MFPCA | Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains |
MFT | The Multiple Filter Test for Change Point Detection |
MfUSampler | Multivariate-from-Univariate (MfU) MCMC Sampler |
mfx | Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs |
mgarchBEKK | Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR) Processes |
MGBT | Multiple Grubbs-Beck Low-Outlier Test |
mgc | Multiscale Graph Correlation |
mgcv | Mixed GAM Computation Vehicle with Automatic Smoothness Estimation |
mgcViz | Visualisations for Generalized Additive Models |
MGDrivE | Mosquito Gene Drive Explorer |
MGL | Module Graphical Lasso |
MGLM | Multivariate Response Generalized Linear Models |
mglmn | Model Averaging for Multivariate GLM with Null Models |
mgm | Estimating Time-Varying k-Order Mixed Graphical Models |
MGMS2 | 'MGMS2' for Polymicrobial Samples |
mgpd | mgpd: Functions for multivariate generalized Pareto distribution (MGPD of Type II) |
MGRASTer | API Client for the MG-RAST Server of the US DOE KBase |
MGSDA | Multi-Group Sparse Discriminant Analysis |
mgsub | Safe, Multiple, Simultaneous String Substitution |
mGSZ | Gene set analysis based on GSZ-scoring function and asymptotic p-value |
mgwrsar | GWR and MGWR with Spatial Autocorrelation |
MHadaptive | General Markov Chain Monte Carlo for Bayesian Inference using adaptive Metropolis-Hastings sampling |
mhazard | Multivariate Survival Function Estimation and Regression |
MHCtools | Analysis of MHC Data in Non-Model Species |
mHG | Minimum-Hypergeometric Test |
MHMM | Finite Mixture of Hidden Markov Model |
mHMMbayes | Multilevel Hidden Markov Models Using Bayesian Estimation |
mhsmm | Inference for Hidden Markov and Semi-Markov Models |
mhtboot | Multiple Hypothesis Test Based on Distribution of p Values |
MHTcop | Tests Controlling the FDR / FWER under Certain Copula Models |
MHTdiscrete | Multiple Hypotheses Testing for Discrete Data |
MHTmult | Multiple Hypotheses Testing for Multiple Families/Groups Structure |
MHTrajectoryR | Bayesian Model Selection in Logistic Regression for the Detection of Adverse Drug Reactions |
mhurdle | Multiple Hurdle Tobit Models |
mi | Missing Data Imputation and Model Checking |
MIAmaxent | A Modular, Integrated Approach to Maximum Entropy Distribution Modeling |
micar | 'Mica' Data Web Portal Client |
mice | Multivariate Imputation by Chained Equations |
miceadds | Some Additional Multiple Imputation Functions, Especially for 'mice' |
micEcon | Microeconomic Analysis and Modelling |
micEconAids | Demand Analysis with the Almost Ideal Demand System (AIDS) |
micEconCES | Analysis with the Constant Elasticity of Substitution (CES) function |
micEconIndex | Price and Quantity Indices |
micEconSNQP | Symmetric Normalized Quadratic Profit Function |
miceFast | Fast Imputations Using 'Rcpp' and 'Armadillo' |
micemd | Multiple Imputation by Chained Equations with Multilevel Data |
miceMNAR | Missing not at Random Imputation Models for Multiple Imputation by Chained Equation |
miceRanger | Multiple Imputation by Chained Equations with Random Forests |
michelRodange | The Works (in Luxembourguish) of Michel Rodange |
micompr | Multivariate Independent Comparison of Observations |
miCoPTCM | Promotion Time Cure Model with Mis-Measured Covariates |
microbats | An Implementation of Bat Algorithm in R |
microbenchmark | Accurate Timing Functions |
MicroDatosEs | Utilities for Official Spanish Microdata |
microdemic | 'Microsoft Academic' API Client |
microhaplot | Microhaplotype Constructor and Visualizer |
MicroMacroMultilevel | Micro-Macro Multilevel Modeling |
micromap | Linked Micromap Plots |
micromapST | Linked Micromap Plots for General U. S. and Other Geographic Areas |
MicroNiche | Microbial Niche Measurements |
micropan | Microbial Pan-Genome Analysis |
microplot | Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel' |
microPop | Modelling Microbial Populations |
microsamplingDesign | Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis |
microseq | Basic Biological Sequence Handling |
microsynth | Synthetic Control Methods with Micro- And Meso-Level Data |
MicSim | Performing Continuous-Time Microsimulation |
MiDA | Microarray Data Analysis |
midas | Turn HTML 'Shiny' |
midasml | Estimation and Prediction Methods for High-Dimensional Mixed Frequency Time Series Data |
midasr | Mixed Data Sampling Regression |
midastouch | Multiple Imputation by Distance Aided Donor Selection |
MIDASwrappeR | Microcluster-Based Detector of Anomalies in Edge Streams |
MIDN | Nearly Exact Sample Size Calculation for Exact Powerful Nonrandomized Tests for Differences Between Binomial Proportions |
midrangeMCP | Multiples Comparisons Procedures Based on Studentized Midrange and Range Distributions |
migest | Methods for the Indirect Estimation of Bilateral Migration |
migration.indices | Migration indices |
migrbc | Production Rules Based Classification of Migration |
migui | Graphical User Interface to the 'mi' Package |
MIICD | Multiple Imputation for Interval Censored Data |
MIIVsem | Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models |
MILC | MIcrosimulation Lung Cancer (MILC) model |
miLineage | Association Tests for Microbial Lineages on a Taxonomic Tree |
milorGWAS | Mixed Logistic Regression for Genome-Wide Analysis Studies (GWAS) |
milr | Multiple-Instance Logistic Regression with LASSO Penalty |
mime | Map Filenames to MIME Types |
mimi | Main Effects and Interactions in Mixed and Incomplete Data |
MImix | Mixture summary method for multiple imputation |
MIMSunit | Algorithm to Compute Monitor Independent Movement Summary Unit (MIMS-Unit) |
mimsy | Calculate MIMS Dissolved Gas Concentrations Without Getting a Headache |
MinBAR | Determining the Minimal Background Area for Species Distribution Models |
mindicador | Indicadores Economicos de Chile (Economic Outlook for Chile) |
MindOnStats | Data sets included in Utts and Heckard's Mind on Statistics |
mindr | Convert Files Between Markdown or R Markdown Files and Mind Maps |
mineCitrus | Extract and Analyze Median Molecule Intensity from 'citrus' Output |
mined | Minimum Energy Designs |
MinEDfind | A Bayesian Design for Minimum Effective Dosing-Finding Trial |
minerva | Maximal Information-Based Nonparametric Exploration for Variable Analysis |
Miney | Implementation of the Well-Known Game to Clear Bombs from a Given Field (Matrix) |
miniCRAN | Create a Mini Version of CRAN Containing Only Selected Packages |
minidown | Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks |
miniGUI | Tcl/Tk Quick and Simple Function GUI |
minimalRSD | Minimally Changed CCD and BBD |
minimap | Create Tile Grid Maps |
minimax | Minimax distribution family |
minimaxdesign | Minimax and Minimax Projection Designs |
miniMeta | Web Application to Run Meta-Analyses |
minimist | Parse Argument Options |
Minirand | Minimization Randomization |
miniUI | Shiny UI Widgets for Small Screens |
minMSE | Implementation of the minMSE Treatment Assignment Method for One or Multiple Treatment Groups |
minpack.lm | R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds |
minqa | Derivative-free optimization algorithms by quadratic approximation |
minque | Various Linear Mixed Model Analyses |
MInt | Learn Direct Interaction Networks |
minval | MINimal VALidation for Stoichiometric Reactions |
minxent | Entropy Optimization Distributions |
mipfp | Multidimensional Iterative Proportional Fitting and Alternative Models |
MIPHENO | Mutant Identification through Probabilistic High throughput Enabled NOrmalization |
mipred | Prediction using Multiple Imputation |
miraculix | Algebraic and Statistical Functions for Genetics |
miRada | MicroRNA Microarray Data Analysis |
MiRAnorm | Adaptive Normalization for miRNA Data |
MiRKAT | Microbiome Regression-Based Analysis Tests |
MiRNAQCD | Micro-RNA Quality Control and Diagnosis |
miRNAss | Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples |
MiRSEA | 'MicroRNA' Set Enrichment Analysis |
mirt | Multidimensional Item Response Theory |
mirtCAT | Computerized Adaptive Testing with Multidimensional Item Response Theory |
miRtest | combined miRNA- and mRNA-testing |
mirtjml | Joint Maximum Likelihood Estimation for High-Dimensional Item Factor Analysis |
misaem | Linear Regression and Logistic Regression with Missing Covariates |
misc3d | Miscellaneous 3D Plots |
miscF | Miscellaneous Functions |
miscFuncs | Miscellaneous Useful Functions Including LaTeX Tables, Kalman Filtering and Development Tools |
miscIC | Misclassified Interval Censored Time-to-Event Data |
misclassGLM | Computation of Generalized Linear Models with Misclassified Covariates Using Side Information |
miscor | Miscellaneous Functions for the Correlation Coefficient |
miscset | Miscellaneous Tools Set |
miscTools | Miscellaneous Tools and Utilities |
mise | Clears the Workspace (Mise en Place) |
miselect | Variable Selection for Multiply Imputed Data |
mispr | Multiple Imputation with Sequential Penalized Regression |
MiSPU | Microbiome Based Sum of Powered Score (MiSPU) Tests |
misreport | Statistical Analysis of Misreporting on Sensitive Survey Questions |
missDeaths | Simulating and Analyzing Time to Event Data in the Presence of Population Mortality |
missForest | Nonparametric Missing Value Imputation using Random Forest |
missingHE | Missing Outcome Data in Health Economic Evaluation |
missMDA | Handling Missing Values with Multivariate Data Analysis |
MissMech | Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random |
missMethods | Methods for Missing Data |
missRanger | Fast Imputation of Missing Values |
missSBM | Handling Missing Data in Stochastic Block Models |
MiST | Mixed effects Score Test for continuous outcomes |
mistat | Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti |
mistr | Mixture and Composite Distributions |
mistral | Methods in Structural Reliability Analysis |
misty | Miscellaneous Functions 'T. Yanagida' |
MitISEM | Mixture of Student t Distributions using Importance Sampling and Expectation Maximization |
mitml | Tools for Multiple Imputation in Multilevel Modeling |
mitools | Tools for Multiple Imputation of Missing Data |
MittagLeffleR | Mittag-Leffler Family of Distributions |
miWQS | Multiple Imputation Using Weighted Quantile Sum Regression |
mix | Estimation/Multiple Imputation for Mixed Categorical and Continuous Data |
mixAK | Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering |
MixAll | Clustering and Classification using Model-Based Mixture Models |
mixAR | Mixture Autoregressive Models |
mixcat | Mixed Effects Cumulative Link and Logistic Regression Models |
mixchar | Mixture Model for the Deconvolution of Thermal Decay Curves |
mixdir | Cluster High Dimensional Categorical Datasets |
mixdist | Finite Mixture Distribution Models |
mixedClust | Co-Clustering of Mixed Type Data |
mixedMem | Tools for Discrete Multivariate Mixed Membership Models |
MixedPoisson | Mixed Poisson Models |
MixedPsy | Statistical Tools for the Analysis of Psychophysical Data |
mixedsde | Estimation Methods for Stochastic Differential Mixed Effects Models |
MixedTS | Mixed Tempered Stable Distribution |
mixEMM | A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable Missing Data |
mixexp | Design and Analysis of Mixture Experiments |
MIXFIM | Evaluation of the FIM in NLMEMs using MCMC |
MixfMRI | Mixture fMRI Clustering Analysis |
mixggm | Mixtures of Gaussian Graphical Models |
MixGHD | Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions |
mixIndependR | Genetics and Independence Testing of Mixed Genetic Panels |
mixKernel | Omics Data Integration Using Kernel Methods |
mixl | Simulated Maximum Likelihood Estimation of Mixed Logit Models for Large Datasets |
mixlink | Mixture Link Regression |
mixlm | Mixed Model ANOVA and Statistics for Education |
MixMAP | Implements the MixMAP Algorithm |
MixMatrix | Classification with Matrix Variate Normal and t Distributions |
mixmeta | An Extended Mixed-Effects Framework for Meta-Analysis |
MixOptim | Mixture Optimization Algorithm |
mixor | Mixed-Effects Ordinal Regression Analysis |
mixPHM | Mixtures of Proportional Hazard Models |
mixR | Finite Mixture Modeling for Raw and Binned Data |
mixRasch | Mixture Rasch Models with JMLE |
mixRaschTools | Plotting and Average Theta Functions for Multiple Class Mixed Rasch Models |
mixreg | Functions to Fit Mixtures of Regressions |
MixRF | A Random-Forest-Based Approach for Imputing Clustered Incomplete Data |
MixSAL | Mixtures of Multivariate Shifted Asymmetric Laplace (SAL) Distributions |
mixsep | Forensic Genetics DNA Mixture Separation |
MixSIAR | Bayesian Mixing Models in R |
MixSim | Simulating Data to Study Performance of Clustering Algorithms |
mixsmsn | Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions |
mixSPE | Mixtures of Power Exponential and Skew Power Exponential Distributions for Use in Model-Based Clustering and Classification |
mixsqp | Sequential Quadratic Programming for Fast Maximum-Likelihood Estimation of Mixture Proportions |
mixtNB | DE Analysis of RNA-Seq Data by Mixtures of NB |
mixtools | Tools for Analyzing Finite Mixture Models |
mixtox | Curve Fitting and Mixture Toxicity Assessment |
mixture | Finite Gaussian Mixture Models for Clustering and Classification |
MixtureInf | Inference for Finite Mixture Models |
MixtureRegLTIC | Mixture Regression Models for Left-Truncated and Interval-Censored Data |
mize | Unconstrained Numerical Optimization Algorithms |
mizer | Multi-Species sIZE Spectrum Modelling in R |
mkde | 2D and 3D movement-based kernel density estimates (MKDEs) |
MKdescr | Descriptive Statistics |
mkin | Kinetic Evaluation of Chemical Degradation Data |
MKinfer | Inferential Statistics |
MKLE | Maximum kernel likelihood estimation |
MKmisc | Miscellaneous Functions from M. Kohl |
mknapsack | Multiple Knapsack Problem Solver |
MKomics | Omics Data Analysis |
MKpower | Power Analysis and Sample Size Calculation |
mkssd | Efficient multi-level k-circulant supersaturated designs |
ML.MSBD | Maximum Likelihood Inference on Multi-State Trees |
mlapi | Abstract Classes for Building 'scikit-learn' Like API |
mlbench | Machine Learning Benchmark Problems |
mlbstats | Major League Baseball Player Statistics Calculator |
MLCIRTwithin | Latent Class Item Response Theory (LC-IRT) Models under Within-Item Multidimensionality |
MLCM | Maximum Likelihood Conjoint Measurement |
MLDAShiny | Interactive Document for Working with Discriminant Analysis |
mldr | Exploratory Data Analysis and Manipulation of Multi-Label Data Sets |
mldr.datasets | R Ultimate Multilabel Dataset Repository |
MLDS | Maximum Likelihood Difference Scaling |
mle.tools | Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s) |
mleap | Interface to 'MLeap' |
mlearning | Machine learning algorithms with unified interface and confusion matrices |
MLEcens | Computation of the MLE for bivariate (interval) censored data |
mlegp | Maximum Likelihood Estimates of Gaussian Processes |
mlergm | Multilevel Exponential-Family Random Graph Models |
mleur | Maximum likelihood unit root test |
MLeval | Machine Learning Model Evaluation |
mlf | Machine Learning Foundations |
mlflow | Interface to 'MLflow' |
MLGL | Multi-Layer Group-Lasso |
mlgt | Multi-Locus Geno-Typing |
mlica2 | Independent Component Analysis using Maximum Likelihood |
MLID | Multilevel Index of Dissimilarity |
mlma | Multilevel Mediation Analysis |
mlmc | Multi-Level Monte Carlo |
MLmetrics | Machine Learning Evaluation Metrics |
mlmi | Maximum Likelihood Multiple Imputation |
MLML2R | Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions |
mlmm.gwas | Pipeline for GWAS Using MLMM |
mlmmm | ML estimation under multivariate linear mixed models with missing values |
MLModelSelection | Model Selection in Multivariate Longitudinal Data Analysis |
MLMOI | Estimating Frequencies, Prevalence and Multiplicity of Infection |
mlmRev | Examples from Multilevel Modelling Software Review |
mlogit | Multinomial Logit Models |
mlogitBMA | Bayesian Model Averaging for Multinomial Logit Models |
MLPA | Multiplex Ligation-Dependent Probe Amplification Data Analysis |
mlPhaser | Multi-Locus Haplotype Phasing |
MLPUGS | Multi-Label Prediction Using Gibbs Sampling (and Classifier Chains) |
mlr | Machine Learning in R |
mlr3 | Machine Learning in R - Next Generation |
mlr3data | Collection of Machine Learning Data Sets for 'mlr3' |
mlr3db | Data Base Backend for 'mlr3' |
mlr3filters | Filter Based Feature Selection for 'mlr3' |
mlr3learners | Recommended Learners for 'mlr3' |
mlr3measures | Performance Measures for 'mlr3' |
mlr3misc | Helper Functions for 'mlr3' |
mlr3pipelines | Preprocessing Operators and Pipelines for 'mlr3' |
mlr3proba | Probabilistic Supervised Learning for 'mlr3' |
mlr3shiny | Machine Learning in 'shiny' with 'mlr3' |
mlr3tuning | Tuning for 'mlr3' |
mlr3verse | Easily Install and Load the 'mlr3' Package Family |
mlr3viz | Visualizations for 'mlr3' |
mlrCPO | Composable Preprocessing Operators and Pipelines for Machine Learning |
mlrMBO | Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions |
MLRShiny | Interactive Application for Working with Multiple Linear Regression |
MLRShiny2 | Interactive Application for Working with Multiple Linear Regression |
mlsjunkgen | Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers |
mlt | Most Likely Transformations |
mlt.docreg | Most Likely Transformations: Documentation and Regression Tests |
mltest | Classification Evaluation Metrics |
mltools | Machine Learning Tools |
mlVAR | Multi-Level Vector Autoregression |
mlxR | Simulation of Longitudinal Data |
MLZ | Mean Length-Based Estimators of Mortality using TMB |
MM | The Multiplicative Multinomial Distribution |
MM2S | Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines |
MM2Sdata | Gene Expression Datasets for the 'MM2S' Package |
MM4LMM | Inference of Linear Mixed Models Through MM Algorithm |
mma | Multiple Mediation Analysis |
MMAC | Data for Mathematical Modeling and Applied Calculus |
mmand | Mathematical Morphology in Any Number of Dimensions |
mmap | Map Pages of Memory |
mmapcharr | Memory-Map Character Files |
mmaqshiny | Explore Air-Quality Mobile-Monitoring Data |
mmc | Multivariate Measurement Error Correction |
mmcm | Modified Maximum Contrast Method |
MMDai | Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Categorical Data |
MMDvariance | Detecting Differentially Variable Genes Using the Mixture of Marginal Distributions |
mme | Multinomial Mixed Effects Models |
mmeln | Estimation of Multinormal Mixture Distribution |
MMeM | Multivariate Mixed Effects Model |
mmeta | Multivariate Meta-Analysis |
MMLR | Fitting Markov-Modulated Linear Regression Models |
mmm | an R package for analyzing multivariate longitudinal data with multivariate marginal models |
mmm2 | Multivariate marginal models with shared regression parameters |
mmmgee | Simultaneous Inference for Multiple Linear Contrasts in GEE Models |
MMMS | Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification |
mmod | Modern Measures of Population Differentiation |
mMPA | Implementation of Marker-Assisted Mini-Pooling with Algorithm |
mmpca | Integrative Analysis of Several Related Data Matrices |
mmpf | Monte-Carlo Methods for Prediction Functions |
mmpp | Various Similarity and Distance Metrics for Marked Point Processes |
mmr | Matrix Multiplication on Data.frames |
MMRcaseselection | Case Classification and Selection Based on Regression Results |
mmsample | Multivariate Matched Sampling |
mmtsne | Multiple Maps t-SNE |
MMVBVS | Missing Multivariate Bayesian Variable Selection |
MMWRweek | Convert Dates to MMWR Day, Week, and Year |
mnis | Easy Downloading Capabilities for the Members' Name Information Service |
mniw | The Matrix-Normal Inverse-Wishart Distribution |
mnj | Machine Learning and Judgement |
mnlfa | Moderated Nonlinear Factor Analysis |
mnlogit | Multinomial Logit Model |
MNLpred | Simulated Predicted Probabilities for Multinomial Logit Models |
MNLR | Interactive Shiny Presentation for Working with Multinomial Logistic Regression |
MNM | Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks |
mnonr | A Generator of Multivariate Non-Normal Random Numbers |
mnormpow | Multivariate Normal Distributions with Power Integrand |
mnormt | The Multivariate Normal and t Distributions, and Their Truncated Versions |
MNP | R Package for Fitting the Multinomial Probit Model |
mnreadR | MNREAD Parameters Estimation and Curve Plotting |
MNS | Mixed Neighbourhood Selection |
mnt | Affine Invariant Tests of Multivariate Normality |
mob | Monotonic Optimal Binning |
mobForest | Model Based Random Forest Analysis |
MobileTrigger | Run Reports, Models, and Scripts from a Mobile Device |
MoBPS | Modular Breeding Program Simulator |
mobsim | Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes |
moc | General Nonlinear Multivariate Finite Mixtures |
moc.gapbk | Multi-Objective Clustering Algorithm Guided by a-Priori Biological Knowledge |
MOCCA | Multi-Objective Optimization for Collecting Cluster Alternatives |
mockery | Mocking Library for R |
mockr | Mocking in R |
mod | Lightweight and Self-Contained Modules for Code Organization |
mod09nrt | Extraction of Bands from MODIS Surface Reflectance Product MOD09 NRT |
Modalclust | Hierarchical Modal Clustering |
modchart | A 'shiny' Module for Creating Charts of Various Types |
modcmfitr | Fit a Modified Connor-Mosimann Distribution to Elicited Quantiles in Multinomial Problems |
modeest | Mode Estimation |
modehunt | Multiscale Analysis for Density Functions |
model4you | Stratified and Personalised Models Based on Model-Based Trees and Forests |
modelbased | Estimation of Model-Based Predictions, Contrasts and Means |
modelc | A Linear Model to 'SQL' Compiler |
Modelcharts | Classification Model Charts |
modeldata | Data Sets Used Useful for Modeling Packages |
modeldb | Fits Models Inside the Database |
modelDown | Make Static HTML Website for Predictive Models |
Modeler | Classes and Methods for Training and Using Binary Prediction Models |
modelfree | Model-free estimation of a psychometric function |
ModelGood | Validation of risk prediction models |
modelgrid | A Framework for Creating, Managing and Training Multiple Caret Models |
modeLLtest | Compare Models with Cross-Validated Log-Likelihood |
ModelMap | Modeling and Map Production using Random Forest and Related Stochastic Models |
ModelMetrics | Rapid Calculation of Model Metrics |
modelObj | A Model Object Framework for Regression Analysis |
modelplotr | Plots to Evaluate the Business Performance of Predictive Models |
modelr | Modelling Functions that Work with the Pipe |
modelStudio | Interactive Studio for Explanatory Model Analysis |
modelsummary | Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready |
modeltests | Testing Infrastructure for Broom Model Generics |
modeltime | The Tidymodels Extension for Time Series Modeling |
modeltools | Tools and Classes for Statistical Models |
modelwordcloud | Model Word Clouds |
moderndive | Tidyverse-Friendly Introductory Linear Regression |
modernVA | An Implementation of Two Modern Education-Based Value-Added Models |
modest | Model-Based Dose-Escalation Trials |
modesto | Modeling and Analysis of Stochastic Systems |
modEvA | Model Evaluation and Analysis |
modgetxl | A 'shiny' Module for Reading Excel Sheets |
modi | Multivariate Outlier Detection and Imputation for Incomplete Survey Data |
modifiedmk | Modified Versions of Mann Kendall and Spearman's Rho Trend Tests |
MODIS | Acquisition and Processing of MODIS Products |
modiscloud | R tools for processing Level 2 Cloud Mask products from MODIS |
MODISSnow | Provides a Function to Download MODIS Snow Cover |
MODISTools | Interface to the 'MODIS Land Products Subsets' Web Services |
MODIStsp | A Tool for Automating Download and Preprocessing of MODIS Land Products Data |
modMax | Community Structure Detection via Modularity Maximization |
modopt.matlab | 'MatLab'-Style Modeling of Optimization Problems |
modQR | Multiple-Output Directional Quantile Regression |
ModStatR | Statistical Modelling in Action with R |
modTurPoint | Estimate ED50 Based on Modified Turning Point Method |
moduleColor | Basic Module Functions |
modules | Self Contained Units of Source Code |
modygliani | MOlecular DYnamics GLobal ANalysis |
MOEADr | Component-Wise MOEA/D Implementation |
MoEClust | Gaussian Parsimonious Clustering Models with Covariates and a Noise Component |
moezipfR | Marshall-Olkin Extended Zipf |
mogavs | Multiobjective Genetic Algorithm for Variable Selection in Regression |
mokken | Conducts Mokken Scale Analysis |
moko | Multi-Objective Kriging Optimization |
molaR | Dental Surface Complexity Measurement Tools |
MoLE | Modeling Language Evolution |
MOLHD | Multiple Objective Latin Hypercube Design |
molic | Multivariate Outlier Detection in Contingency Tables |
mombf | Bayesian Model Selection and Averaging for Non-Local and Local Priors |
momentchi2 | Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables |
momentfit | Methods of Moments |
moments | Moments, cumulants, skewness, kurtosis and related tests |
momentuHMM | Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models |
Momocs | Morphometrics using R |
MoMPCA | Inference and Clustering for Mixture of Multinomial Principal Component Analysis |
momr | Mining Metaomics Data (MetaOMineR) |
MomTrunc | Moments of Folded and Doubly Truncated Multivariate Distributions |
mondate | Keep track of dates in terms of months |
Mondrian | A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events |
MonetDB.R | Connect MonetDB to R |
mongolite | Fast and Simple 'MongoDB' Client for R |
monitoR | Acoustic Template Detection in R |
monkeylearn | Accesses the Monkeylearn API for Text Classifiers and Extractors |
monmlp | Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints |
monographaR | Taxonomic Monographs Tools |
MonoInc | Monotonic Increasing |
monomvn | Estimation for MVN and Student-t Data with Monotone Missingness |
MonoPoly | Functions to Fit Monotone Polynomials |
monoreg | Bayesian Monotonic Regression Using a Marked Point Process Construction |
monotonicity | Test for Monotonicity in Expected Asset Returns, Sorted by Portfolios |
monreg | Nonparametric Monotone Regression |
Monte.Carlo.se | Monte Carlo Standard Errors |
MonteCarlo | Automatic Parallelized Monte Carlo Simulations |
moonBook | Functions and Datasets for the Book by Keon-Woong Moon |
mopsocd | MOPSOCD: Multi-objective Particle Swarm Optimization with Crowding Distance |
MOQA | Basic Quality Data Assurance for Epidemiological Research |
MOrder | Check Time Homogeneity and Markov Chain Order |
moreparty | A Toolbox for Conditional Inference Random Forests |
morgenstemning | Color schemes compatible with red-green color perception difficulties |
morpheus | Estimate Parameters of Mixtures of Logistic Regressions |
Morpho | Calculations and Visualisations Related to Geometric Morphometrics |
morphomap | Morphometric Maps, Bone Landmarking and Cross Sectional Geometry |
morse | Modelling Tools for Reproduction and Survival Data in Ecotoxicology |
MorseGen | Simple raw data generator based on user-specified summary statistics |
mortAAR | Analysis of Archaeological Mortality Data |
MortalityGaps | The Double-Gap Life Expectancy Forecasting Model |
MortalityLaws | Parametric Mortality Models, Life Tables and HMD |
MortalitySmooth | Smoothing and Forecasting Poisson Counts with P-Splines |
MortalityTables | A Framework for Various Types of Mortality / Life Tables |
MortCast | Estimation and Projection of Age-Specific Mortality Rates |
mosaic | Project MOSAIC Statistics and Mathematics Teaching Utilities |
mosaic.find | Finding Rhythmic and Non-Rhythmic Trends in Multi-Omics Data (MOSAIC) |
mosaicCalc | Function-Based Numerical and Symbolic Differentiation and Antidifferentiation |
mosaicCore | Common Utilities for Other MOSAIC-Family Packages |
mosaicData | Project MOSAIC Data Sets |
mosaicModel | An Interface to Statistical Modeling Independent of Model Architecture |
mosmafs | Multi-Objective Simultaneous Model and Feature Selection |
MOST | Multiphase Optimization Strategy |
mosum | Moving Sum Based Procedures for Changes in the Mean |
MoTBFs | Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions |
MOTE | Effect Size and Confidence Interval Calculator |
motifcluster | Motif-Based Spectral Clustering of Weighted Directed Networks |
motmot | Models of Trait Macroevolution on Trees |
motoRneuron | Analyzing Paired Neuron Discharge Times for Time-Domain Synchronization |
moult | Models for Analysing Moult in Birds |
mountainplot | Mountain Plots, Folded Empirical Cumulative Distribution Plots |
mousetrack | Mouse-Tracking Measures from Trajectory Data |
mousetrap | Process and Analyze Mouse-Tracking Data |
move | Visualizing and Analyzing Animal Track Data |
movecost | Calculation of Accumulated Cost Surface and Least-Cost Paths Related to Human Movement Across the Landscape |
moveHMM | Animal Movement Modelling using Hidden Markov Models |
moveVis | Movement Data Visualization |
moveWindSpeed | Estimate Wind Speeds from Bird Trajectories |
movMF | Mixtures of von Mises-Fisher Distributions |
mozzie | Weekly Notified Dengue Cases in Sri Lanka |
mp | Multidimensional Projection Techniques |
mpa | CoWords Method |
mpath | Regularized Linear Models |
mpbart | Multinomial Probit Bayesian Additive Regression Trees |
MPBoost | Treatment Allocation in Clinical Trials by the Maximal Procedure |
MPCI | Multivariate Process Capability Indices (MPCI) |
mpcmp | Mean-Parametrized Conway-Maxwell Poisson (COM-Poisson) Regression |
mpcv | Multivariate Process Capability Vector |
MPDiR | Data sets and scripts for Modeling Psychophysical Data in R |
mpe | Multiple Primary Endpoints |
MPINet | The package can implement the network-based metabolite pathway identification of pathways |
MPkn | Calculations of One Discrete Model in Several Time Steps |
MPLikelihoodWB | Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters |
mplot | Graphical Model Stability and Variable Selection Procedures |
MplusAutomation | An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus |
MplusTrees | Decision Trees with Structural Equation Models Fit in 'Mplus' |
mpm | Multivariate Projection Methods |
mpMap2 | Genetic Analysis of Multi-Parent Recombinant Inbred Lines |
mpmcorrelogram | Multivariate Partial Mantel Correlogram |
mpmi | Mixed-Pair Mutual Information Estimators |
MPN | Most Probable Number and Other Microbial Enumeration Techniques |
mpoly | Symbolic Computation and More with Multivariate Polynomials |
mppa | Statistics for analysing multiple simultaneous point processes on the real line |
mppR | Multi-Parent Population QTL Analysis |
mpr | Multi-Parameter Regression (MPR) |
MPR.genotyping | Maximum Parsimony of Recombination to Infer Parental Genotypes |
MPS | Estimating Through the Maximum Product Spacing Approach |
MPSEM | Modeling Phylogenetic Signals using Eigenvector Maps |
mpspline2 | Mass-Preserving Spline Functions for Soil Data |
MPsychoR | Modern Psychometrics with R |
mpt | Multinomial Processing Tree Models |
MPTinR | Analyze Multinomial Processing Tree Models |
MPTmultiverse | Multiverse Analysis of Multinomial Processing Tree Models |
mptools | RAMAS Metapop Tools |
MPV | Data Sets from Montgomery, Peck and Vining |
MQMF | Modelling and Quantitative Methods in Fisheries |
Mqrcm | M-Quantile Regression Coefficients Modeling |
mQTL | Metabolomic Quantitative Trait Locus Mapping |
mr.raps | Two Sample Mendelian Randomization using Robust Adjusted Profile Score |
mra | Mark-Recapture Analysis |
mratios | Ratios of Coefficients in the General Linear Model |
mrbayes | Bayesian Summary Data Models for Mendelian Randomization Studies |
mrbin | Magnetic Resonance Binning, Integration and Normalization |
mrbsizeR | Scale Space Multiresolution Analysis of Random Signals |
MRCV | Methods for Analyzing Multiple Response Categorical Variables (MRCVs) |
mrds | Mark-Recapture Distance Sampling |
mreg | Fits regression models when the outcome is partially missing |
mregions | Marine Regions Data from 'Marineregions.org' |
mrf2d | Markov Random Field Models for Image Analysis |
MRFA | Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach |
MRFcov | Markov Random Fields with Additional Covariates |
mrfDepth | Depth Measures in Multivariate, Regression and Functional Settings |
mrfse | Markov Random Field Structure Estimator |
mrgsim.parallel | Simulate with 'mrgsolve' in Parallel |
mrgsolve | Simulate from ODE-Based Models |
MRH | Multi-Resolution Estimation of the Hazard Rate |
MRHawkes | Multivariate Renewal Hawkes Process |
mri | Modified Rand and Wallace Indices |
mritc | MRI Tissue Classification |
MRmediation | A Causal Mediation Method with Methylated Region (MR) as the Mediator |
mrMLM | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study |
mrMLM.GUI | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface |
MRMR | Multivariate Regression Models for Reserving |
mRMRe | "Parallelized Minimum Redundancy, Maximum Relevance (mRMR) Ensemble Feature Selection" |
mro | Multiple Correlation |
MRPC | PC Algorithm with the Principle of Mendelian Randomization |
mRpostman | IMAP Toolkit |
MRQoL | Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life |
MRReg | MDL Multiresolution Linear Regression Framework |
MRS | Multi-Resolution Scanning for Cross-Sample Differences |
MrSGUIDE | Multiple Responses Subgroup Identification using 'GUIDE' Algorithm |
MRsurv | A multiplicative-regression model for relative survival |
MRTSampleSize | A Sample Size Calculator for Micro-Randomized Trials |
ms.sev | Package for Calculation of ARMSS, Local MSSS and Global MSSS |
msae | Multivariate Fay Herriot Models for Small Area Estimation |
msaenet | Multi-Step Adaptive Estimation Methods for Sparse Regressions |
msaFACE | Moving Subset Analysis FACE |
msap | Statistical analysis for Methylation-sensitive Amplification Polymorphism data |
msaR | Multiple Sequence Alignment for R Shiny |
MSbox | Mass Spectrometry Tools |
msBP | Multiscale Bernstein Polynomials for Densities |
mschart | Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents |
MSCMT | Multivariate Synthetic Control Method Using Time Series |
MScombine | Combine Data from Positive and Negative Ionization Mode Finding Common Entities |
MSCquartets | Analyzing Gene Tree Quartets under the Multi-Species Coalescent |
mscstexta4r | R Client for the Microsoft Cognitive Services Text Analytics REST API |
mscstts | R Client for the Microsoft Cognitive Services 'Text-to-Speech' REST API |
mscsweblm4r | R Client for the Microsoft Cognitive Services Web Language Model REST API |
msd | Method of Successive Dichotomizations |
msda | Multi-Class Sparse Discriminant Analysis |
msde | Bayesian Inference for Multivariate Stochastic Differential Equations |
MsdeParEst | Parametric Estimation in Mixed-Effects Stochastic Differential Equations |
MSEtool | Management Strategy Evaluation Toolkit |
MSG | Data and Functions for the Book Modern Statistical Graphics |
MSGARCH | Markov-Switching GARCH Models |
msgl | Multinomial Sparse Group Lasso |
MSGLasso | Multivariate Sparse Group Lasso for the Multivariate Multiple Linear Regression with an Arbitrary Group Structure |
msgpackR | A library to serialize or unserialize data in MessagePack format |
msgps | Degrees of Freedom of Elastic Net, Adaptive Lasso and Generalized Elastic Net |
msgr | Extends Messages, Warnings and Errors by Adding Levels and Log Files |
msigdbr | MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format |
mSimCC | Micro Simulation Model for Cervical Cancer Prevention |
msir | Model-Based Sliced Inverse Regression |
MSIseq | Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations |
msltrend | Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records |
msm | Multi-State Markov and Hidden Markov Models in Continuous Time |
msma | Multiblock Sparse Multivariable Analysis |
msme | Functions and Datasets for "Methods of Statistical Model Estimation" |
msmtools | Building Augmented Data to Run Multi-State Models with 'msm' Package |
MSMwRA | Multivariate Statistical Methods with R Applications |
msos | Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden |
MSPRT | A Modified Sequential Probability Ratio Test (MSPRT) |
MSQC | Multivariate Statistical Quality Control |
MSRDT | Multi-State Reliability Demonstration Tests (MSRDT) |
mssm | Multivariate State Space Models |
mssqlR | MSSQL Querying using R |
msSurv | Nonparametric Estimation for Multistate Models |
MST | Multivariate Survival Trees |
mstate | Data Preparation, Estimation and Prediction in Multi-State Models |
mStats | Epidemiological Data Analysis |
mstDIF | A Collection of DIF Tests for Multistage Tests |
mSTEM | Multiple Testing of Local Extrema for Detection of Change Points |
mstherm | Analyze MS/MS Protein Melting Data |
mstknnclust | MST-kNN Clustering Algorithm |
mstR | Procedures to Generate Patterns under Multistage Testing |
mstrio | Interface for 'MicroStrategy' REST API |
msu | Multivariate Symmetric Uncertainty and Other Measurements |
MSwM | Fitting Markov Switching Models |
MTA | Multiscalar Territorial Analysis |
MTAR | Multi-Trait Analysis of Rare-Variant Association Study |
mtconnectR | Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis |
MTDrh | Mass Transportation Distance Rank Histogram |
mthapower | Sample Size and Power for Association Studies Involving Mitochondrial DNA Haplogroups |
mtk | Mexico ToolKit library (MTK) |
MTLR | Survival Prediction with Multi-Task Logistic Regression |
MTPS | Multi-Task Prediction using Stacking Algorithms |
MtreeRing | A Shiny Application for Automatic Measurements of Tree-Ring Widths on Digital Images |
MTS | All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models |
mtsdi | Multivariate Time Series Data Imputation |
MTSYS | Methods in Mahalanobis-Taguchi (MT) System |
MUACz | Generate MUAC and BMI z-Scores and Percentiles for Children and Adolescents |
MuChPoint | Multiple Change Point |
muckrock | Data on Freedom of Information Act Requests |
mudata2 | Interchange Tools for Multi-Parameter Spatiotemporal Data |
mudens | Density Estimate |
mudfold | Multiple UniDimensional unFOLDing |
mueRelativeRisk | Relative Risk Based on the Ratio of Median Unbiased Estimates |
MuFiCokriging | Multi-Fidelity Cokriging models |
muhaz | Hazard Function Estimation in Survival Analysis |
muHVT | Constructing Hierarchical Voronoi Tessellations and Overlay Heatmap for Data Analysis |
muir | Exploring Data with Tree Data Structures |
MullerPlot | Generates Muller Plot from Population/Abundance/Frequency Dynamics Data |
mulset | Multiset Intersection Generator |
MultAlloc | Optimal Allocation in Stratified Sampling |
multbxxc | Auxiliary Routines for Influx Software |
multcomp | Simultaneous Inference in General Parametric Models |
multcompView | Visualizations of Paired Comparisons |
multDM | Multivariate Version of the Diebold-Mariano Test |
multdyn | Multiregression Dynamic Models |
MultEq | Multiple Equivalence Tests and Simultaneous Confidence Intervals |
multfisher | Optimal Exact Tests for Multiple Binary Endpoints |
multgee | GEE Solver for Correlated Nominal or Ordinal Multinomial Responses |
multiApply | Apply Functions to Multiple Multidimensional Arrays or Vectors |
multiAssetOptions | Finite Difference Method for Multi-Asset Option Valuation |
multiband | Period Estimation for Multiple Bands |
MultiBD | Multivariate Birth-Death Processes |
multibiplotGUI | Multibiplot Analysis in R |
multiCA | Multinomial Cochran-Armitage Trend Test |
multicastR | A Companion to the Multi-CAST Collection |
multichull | A Generic Convex-Hull-Based Model Selection Method |
multicmp | Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution |
MultiCNVDetect | Multiple Copy Number Variation Detection |
multiColl | Collinearity Detection in a Multiple Linear Regression Model |
multicolor | Add Multiple Colors to your Console & RMarkdown Output |
multicon | Multivariate Constructs |
multicool | Permutations of Multisets in Cool-Lex Order |
multicross | A Graph-Based Test for Comparing Multivariate Distributions in the Multi Sample Framework |
multiDimBio | Multivariate Analysis and Visualization for Biological Data |
MultiFit | Multiscale Fisher's Independence Test for Multivariate Dependence |
multifluo | Dealing with Several Images of a Same Object Constituted of Different Zones |
multifwf | Read Fixed Width Format Files Containing Lines of Different Type |
MultiGHQuad | Multidimensional Gauss-Hermite Quadrature |
multigraph | Plot and Manipulate Multigraphs |
multigroup | Multigroup Data Analysis |
MultiJoin | Enables Efficient Joining of Data File on Common Fields using the Unix Utility Join |
MultiKink | Estimation and Inference for Multi-Kink Quantile Regression |
multilaterals | Transitive Index Numbers for Cross-Sections and Panel Data |
MultiLCIRT | Multidimensional Latent Class Item Response Theory Models |
multilevel | Multilevel Functions |
multilevelPSA | Multilevel Propensity Score Analysis |
multilevelTools | Multilevel and Mixed Effects Model Diagnostics and Effect Sizes |
multilinguer | Gentle Language Installer for R User |
multimark | Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks |
multiMarker | Latent Variable Model to Infer Food Intake from Multiple Biomarkers |
multimode | Mode Testing and Exploring |
multinbmod | Regression analysis of overdispersed correlated count data |
multinet | Analysis and Mining of Multilayer Social Networks |
multinets | Multilevel Networks Analysis |
multinma | Bayesian Network Meta-Analysis of Individual and Aggregate Data |
MultinomialCI | Simultaneous Confidence Intervals for Multinomial Proportions According to the Method by Sison and Glaz |
multinomineq | Bayesian Inference for Multinomial Models with Inequality Constraints |
multinomRob | Robust Estimation of Overdispersed Multinomial Regression Models |
MultiOrd | Generation of Multivariate Ordinal Variates |
multipanelfigure | Infrastructure to Assemble Multi-Panel Figures (from Grobs) |
MultiPhen | A Package to Test for Multi-Trait Association |
multiPIM | Variable Importance Analysis with Population Intervention Models |
MultipleBubbles | Test and Detection of Explosive Behaviors for Time Series |
multipleNCC | Weighted Cox-Regression for Nested Case-Control Data |
multiplex | Algebraic Tools for the Analysis of Multiple Social Networks |
MultiplierDEA | Multiplier Data Envelopment Analysis and Cross Efficiency |
multipol | Multivariate Polynomials |
multiRDPG | Multiple Random Dot Product Graphs |
multirich | Calculate Multivariate Richness via UTC and sUTC |
MultiRNG | Multivariate Pseudo-Random Number Generation |
MultiRobust | Multiply Robust Methods for Missing Data Problems |
multiROC | Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications |
MultiRR | Bias, Precision, and Power for Multi-Level Random Regressions |
multiselect | Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome |
multisensi | Multivariate Sensitivity Analysis |
MultisiteMediation | Causal Mediation Analysis in Multisite Trials |
MultiSkew | Measures, Tests and Removes Multivariate Skewness |
multisom | Clustering a Data Set using Multi-SOM Algorithm |
multispatialCCM | Multispatial Convergent Cross Mapping |
MultiSV | MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing |
multitaper | Spectral Analysis Tools using the Multitaper Method |
multivar | Penalized Estimation and Forecasting of Multiple Subject Vector Autoregressive (multi-VAR) Models |
multivariance | Measuring Multivariate Dependence Using Distance Multivariance |
MultivariateRandomForest | Models Multivariate Cases Using Random Forests |
MultiVarMI | Multiple Imputation for Multivariate Data |
MultiVarSel | Variable Selection in a Multivariate Linear Model |
multivator | A Multivariate Emulator |
multiviewtest | Hypothesis Tests for Association Between Subgroups in Two Data Views |
multiwave | Estimation of Multivariate Long-Memory Models Parameters |
multiway | Component Models for Multi-Way Data |
MultiwayRegression | Perform Tensor-on-Tensor Regression |
multiwayvcov | Multi-Way Standard Error Clustering |
MultNonParam | Multivariate Nonparametric Methods |
multxpert | Common Multiple Testing Procedures and Gatekeeping Procedures |
muma | Metabolomics Univariate and Multivariate Analysis |
MuMIn | Multi-Model Inference |
mumm | Multiplicative Mixed Models using the Template Model Builder |
munfold | Metric Unfolding |
munsell | Utilities for Using Munsell Colours |
munsellinterpol | Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB |
muRL | Mailmerge using R, LaTeX, and the Web |
murphydiagram | Murphy Diagrams for Forecast Comparisons |
muRty | Murty's Algorithm for k-Best Assignments |
MUS | Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing |
music | Learn and Experiment with Music Theory |
musica | Multiscale Climate Model Assessment |
musicNMR | Conversion of Nuclear Magnetic Resonance spectrum in audio file |
mustashe | Stash and Load Objects |
muStat | Prentice Rank Sum Test and McNemar Test |
mut | Pairwise Likelihood Ratios |
mutoss | Unified Multiple Testing Procedures |
mutossGUI | A Graphical User Interface for the MuToss Project |
mutSignatures | Decipher Mutational Signatures from Somatic Mutational Catalogs |
MuViCP | MultiClass Visualizable Classification using Combination of Projections |
MVA | An Introduction to Applied Multivariate Analysis with R |
mvabund | Statistical Methods for Analysing Multivariate Abundance Data |
MVar | Multivariate Analysis |
MVar.pt | Analise multivariada (brazilian portuguese) |
MVB | Mutivariate Bernoulli log-linear model |
MvBinary | Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution |
mvbutils | Workspace Organization, Code and Documentation Editing, Package Prep and Editing, Etc |
mvc | Multi-View Clustering |
mvcluster | Multi-View Clustering |
mvctm | Multivariate Variance Components Tests for Multilevel Data |
mvdalab | Multivariate Data Analysis Laboratory |
mvglmmRank | Multivariate Generalized Linear Mixed Models for Ranking Sports Teams |
mvinfluence | Influence Measures and Diagnostic Plots for Multivariate Linear Models |
MVisAGe | Compute and Visualize Bivariate Associations |
MVLM | Multivariate Linear Model with Analytic p-Values |
mvLSW | Multivariate, Locally Stationary Wavelet Process Estimation |
mvmesh | Multivariate Meshes and Histograms in Arbitrary Dimensions |
mvmeta | Multivariate and Univariate Meta-Analysis and Meta-Regression |
mvMISE | A General Framework of Multivariate Mixed-Effects Selection Models |
mvMonitoring | Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring |
mvMORPH | Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data |
MVN | Multivariate Normality Tests |
mvna | Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models |
MVNBayesian | Bayesian Analysis Framework for MVN (Mixture) Distribution |
mvnfast | Fast Multivariate Normal and Student's t Methods |
mvngGrAd | Moving Grid Adjustment in Plant Breeding Field Trials |
mvnormalTest | Powerful Tests for Multivariate Normality |
mvnormtest | Normality test for multivariate variables |
mvnpermute | Generate New Multivariate Normal Samples from Permutations |
mvnTest | Goodness of Fit Tests for Multivariate Normality |
MVNtestchar | Test for Multivariate Normal Distribution Based on a Characterization |
mvord | Multivariate Ordinal Regression Models |
mvoutlier | Multivariate Outlier Detection Based on Robust Methods |
mvp | Fast Symbolic Multivariate Polynomials |
mvPot | Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events |
mvprpb | Orthant Probability of the Multivariate Normal Distribution |
mvQuad | Methods for Multivariate Quadrature |
MVQuickGraphs | Quick Multivariate Graphs |
MVR | Mean-Variance Regularization |
mvrsquared | Compute the Coefficient of Determination for Vector or Matrix Outcomes |
mvrtn | Mean and Variance of Truncated Normal Distribution |
mvsf | Shapiro-Francia Multivariate Normality Test |
mvShapiroTest | Generalized Shapiro-Wilk test for multivariate normality |
mvSLOUCH | Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
mvst | Bayesian Inference for the Multivariate Skew-t Model |
MVT | Estimation and Testing for the Multivariate t-Distribution |
mvtmeta | Multivariate Meta-Analysis |
mvtnorm | Multivariate Normal and t Distributions |
mvtsplot | Multivariate Time Series Plot |
mwa | Causal Inference in Spatiotemporal Event Data |
mwaved | Multichannel Wavelet Deconvolution with Additive Long Memory Noise |
MWLasso | Penalized Moving-Window Lasso Method for Genome-Wide Association Studies |
MWRidge | Two Stage Moving-Window Ridge Method for Prediction and Estimation |
MWright | Mainardi-Wright Family of Distributions |
mwshiny | 'Shiny' for Multiple Windows |
mxkssd | Efficient mixed-level k-circulant supersaturated designs |
MXM | Feature Selection (Including Multiple Solutions) and Bayesian Networks |
mxmmod | Measurement Model of Derivatives in 'OpenMx' |
My.stepwise | Stepwise Variable Selection Procedures for Regression Analysis |
mycobacrvR | Integrative immunoinformatics for Mycobacterial diseases in R platform |
mycor | Automatic Correlation and Regression Test in a 'data.frame' |
myepisodes | MyEpisodes RSS/API functions |
Myrrix | Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable Clustering and Recommender System, Evolved from Apache Mahout |
Myrrixjars | R/Myrrix Interface Jars |
myTAI | Evolutionary Transcriptomics |
mztwinreg | Regression Models for Monozygotic Twin Data |
n1qn1 | Port of the 'Scilab' 'n1qn1' Modules for Un-constrained BFGS Optimization |
N2H4 | Handling Methods for Naver News Text Crawling |
na.tools | Comprehensive Library for Working with Missing (NA) Values in Vectors |
naaccr | Read Cancer Records in the NAACCR Format |
nabor | Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions |
NACHO | NanoString Quality Control Dashboard |
NADA | Nondetects and Data Analysis for Environmental Data |
nadiv | (Non)Additive Genetic Relatedness Matrices |
NAEPprimer | The NAEP Primer |
naijR | Operations to Ease Data Analyses Specific to Nigeria |
naivebayes | High Performance Implementation of the Naive Bayes Algorithm |
naivereg | Nonparametric Additive Instrumental Variable Estimator and Related IV Methods |
nakagami | Functions for the Nakagami Distribution |
NAM | Nested Association Mapping |
namedCapture | Named Capture Regular Expressions |
NameNeedle | Using Needleman-Wunsch to Match Sample Names |
namer | Names Your 'R Markdown' Chunks |
namespace | Provide namespace managment functions not (yet) present in base R |
nametagger | Named Entity Recognition in Texts using 'NameTag' |
nandb | Number and Brightness Image Analysis |
naniar | Data Structures, Summaries, and Visualisations for Missing Data |
nanny | High-Level Data Analysis and Manipulation in 'tidyverse' Style |
nanop | Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function |
NanoStringNorm | Normalize NanoString miRNA and mRNA Data |
nanostringr | Performs Quality Control, Data Normalization, and Batch Effect Correction for 'NanoString nCounter' Data |
nanotime | Nanosecond-Resolution Time for R |
NAPPA | Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data |
naptime | A Flexible and Robust Sys.sleep() Replacement |
nardl | Nonlinear Cointegrating Autoregressive Distributed Lag Model |
narray | Subset- And Name-Aware Array Utility Functions |
nasadata | Interface to Various NASA API's |
nasapower | NASA POWER API Client |
nasaweather | Collection of datasets from the ASA 2006 data expo |
nat | NeuroAnatomy Toolbox for Analysis of 3D Image Data |
nat.nblast | NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron Similarity and Clustering |
nat.templatebrains | NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains |
nat.utils | File System Utility Functions for 'NeuroAnatomy Toolbox' |
nationwider | Download House Price Data from Nationwide |
natmanager | Install the 'Natverse' Packages from Scratch |
natserv | 'NatureServe' Interface |
natural | Estimating the Error Variance in a High-Dimensional Linear Model |
naturalsort | Natural Ordering |
NatureSounds | Animal Sounds for Bioacustic Analysis |
nawtilus | Navigated Weighting for the Inverse Probability Weighting |
NB | Maximum Likelihood method in estimating effective population size from genetic data |
NB.MClust | Negative Binomial Model-Based Clustering |
NBAloveR | Help Basketball Data Analysis |
NBBttest | Negative Binomial Beta t-Test |
NbClust | Determining the Best Number of Clusters in a Data Set |
nbconvertR | Vignette Engine Wrapping Jupyter Notebooks |
NBDdirichlet | NBD-Dirichlet Model of Consumer Buying Behavior for Marketing Research |
NBDesign | Design and Monitoring of Clinical Trials with Negative Binomial Endpoint |
NBLDA | Negative Binomial Linear Discriminant Analysis |
nbpMatching | Functions for Optimal Non-Bipartite Matching |
NBPSeq | Negative Binomial Models for RNA-Sequencing Data |
NBR | Network-Based R-Statistics using Mixed Effects Models |
NBShiny | Interactive Document for Working with Naive Bayes Classification |
NBShiny2 | Interactive Document for Working with Naive Bayes Classification |
NBShiny3 | Interactive Document for Working with Naive Bayes Classification |
nbTransmission | Naive Bayes Transmission Analysis |
nc | Named Capture to Data Tables |
NCA | Necessary Condition Analysis |
nCal | Nonlinear Calibration |
ncappc | NCA Calculations and Population Model Diagnosis |
ncar | Noncompartmental Analysis for Pharmacokinetic Report |
ncbit | retrieve and build NBCI taxonomic data |
ncdf4 | Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files |
ncdf4.helpers | Helper Functions for Use with the 'ncdf4' Package |
ncdfgeom | 'NetCDF' Geometry and Time Series |
ncdump | Extract Metadata from 'NetCDF' Files as Data Frames |
nCDunnett | Noncentral Dunnett's Test Distribution |
ncf | Spatial Covariance Functions |
ncg | Computes the noncentral gamma function |
ncmeta | Straightforward 'NetCDF' Metadata |
NCmisc | Miscellaneous Functions for Creating Adaptive Functions and Scripts |
ncodeR | Techniques for Automated Classifiers |
nCopula | Hierarchical Archimedean Copulas Constructed with Multivariate Compound Distributions |
ncpen | Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models |
NCSampling | Nearest Centroid (NC) Sampling |
NCSCopula | Non-Central Squared Copula Models Estimation |
NCutYX | Clustering of Omics Data of Multiple Types with a Multilayer Network Representation |
ncvreg | Regularization Paths for SCAD and MCP Penalized Regression Models |
ndjson | Wicked-Fast Streaming 'JSON' ('ndjson') Reader |
ndl | Naive Discriminative Learning |
NDP | Interactive Presentation for Working with Normal Distribution |
ndtv | Network Dynamic Temporal Visualizations |
nearfar | Near-Far Matching |
neariso | Near-Isotonic Regression |
neat | Efficient Network Enrichment Analysis Test |
neatmaps | Heatmaps for Multiple Network Data |
neatRanges | Tidy Up Date/Time Ranges |
neatStats | Neat and Painless Statistical Reporting |
needmining | A Simple Needmining Implementation |
needs | Attaches and Installs Packages |
needy | needy |
NEff | Calculating Effective Sizes Based on Known Demographic Parameters of a Population |
NegBinBetaBinreg | Negative Binomial and Beta Binomial Bayesian Regression Models |
negenes | Estimating the Number of Essential Genes in a Genome |
neighbr | Classification, Regression, Clustering with K Nearest Neighbors |
neldermead | R Port of the 'Scilab' Neldermead Module |
neo2R | Neo4j to R |
neo4jshell | Querying and Managing 'Neo4J' Databases in 'R' |
neo4r | A 'Neo4J' Driver |
neonUtilities | Utilities for Working with NEON Data |
neotoma | Access to the Neotoma Paleoecological Database Through R |
nephro | Utilities for Nephrology |
NEpiC | Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals |
neptune | Interface to 'Neptune' Experiment Tracking and Management Tool |
nesRdata | National Eutrophication Survey Data |
NestedCategBayesImpute | Modeling, Imputing and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations |
NestedCohort | Survival Analysis for Cohorts with Missing Covariate Information |
nestfs | Cross-Validated (Nested) Forward Selection |
netassoc | Inference of Species Associations from Co-Occurrence Data |
netchain | Inferring Causal Effects on Collective Outcomes under Interference |
netClust | Model-Based Clustering of Network Data |
NetCluster | Clustering for networks |
netCoin | Interactive Analytic Networks |
netcom | Dynamic Network Alignment |
NetComp | Network Generation and Comparison |
netcontrol | Control Theory Methods for Networks |
NetData | Network Data for McFarland's SNA R labs |
netdep | Testing for Network Dependence |
netdiffuseR | Analysis of Diffusion and Contagion Processes on Networks |
netgen | Network Generator for Combinatorial Graph Problems |
netgsa | Network-Based Gene Set Analysis |
netgwas | Network-Based Genome Wide Association Studies |
NetIndices | Estimating network indices, including trophic structure of foodwebs in R |
netjack | Tools for Working with Samples of Networks |
NetLogoR | Build and Run Spatially Explicit Agent-Based Models |
netmeta | Network Meta-Analysis using Frequentist Methods |
NetMix | Dynamic Mixed-Membership Network Regression Model |
NetOrigin | Origin Estimation for Propagation Processes on Complex Networks |
NetPreProc | Network Pre-Processing and Normalization |
netrankr | Analyzing Partial Rankings in Networks |
netregR | Regression of Network Responses |
NetRep | Permutation Testing Network Module Preservation Across Datasets |
nets | Network Estimation for Time Series |
netSEM | Network Structural Equation Modeling |
NetSimR | Actuarial Functions for Non-Life Insurance Modelling |
netstat | Retrieve Network Statistics Including Available TCP Ports |
NetSwan | Network Strengths and Weaknesses Analysis |
NetWeaver | Graphic Presentation of Complex Genomic and Network Data Analysis |
network | Classes for Relational Data |
networkABC | Network Reverse Engineering with Approximate Bayesian Computation |
NetworkChange | Bayesian Package for Network Changepoint Analysis |
NetworkComparisonTest | Statistical Comparison of Two Networks Based on Three Invariance Measures |
networkD3 | D3 JavaScript Network Graphs from R |
NetworkDistance | Distance Measures for Networks |
networkDynamic | Dynamic Extensions for Network Objects |
networkDynamicData | Dynamic (Longitudinal) Network Datasets |
NetworkExtinction | Extinction Simulation in Food Webs |
networkGen | Network Maze Generator |
NetworkInference | Inferring Latent Diffusion Networks |
networkR | Network Analysis and Visualization |
NetworkReg | Regression Model on Network-Linked Data with Statistical Inference |
networkreporting | Tools for using Network Reporting Estimators |
NetworkRiskMeasures | Risk Measures for (Financial) Networks |
NetworkSim | Network Comparison Based on Structural Equivalence and Graphlets |
networksis | Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling |
networkTomography | Tools for network tomography |
NetworkToolbox | Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis |
networktools | Tools for Identifying Important Nodes in Networks |
networktree | Recursive Partitioning of Network Models |
neural | Neural Networks |
neuralnet | Training of Neural Networks |
NeuralNetTools | Visualization and Analysis Tools for Neural Networks |
NeuralSens | Sensitivity Analysis of Neural Networks |
neurobase | 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects |
neuroblastoma | Neuroblastoma copy number profiles |
neurocInstall | 'Neuroconductor' Installer |
neurohcp | Human 'Connectome' Project Interface |
neuroim | Data Structures and Handling for Neuroimaging Data |
neuromplex | Neural Multiplexing Analysis |
neuRosim | Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data |
neutralitytestr | Test for a Neutral Evolutionary Model in Cancer Sequencing Data |
neverhpfilter | An Alternative to the Hodrick-Prescott Filter |
Newdistns | Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions |
newFocus | True Discovery Guarantee by the New Focus Level Procedure |
NewmanOmics | Extending the Newman Studentized Range Statistic to Transcriptomics |
newsanchor | Client for the News API |
newscatcheR | Programmatically Collect Normalized News from (Almost) Any Website |
newsmap | Semi-Supervised Model for Geographical Document Classification |
newTestSurvRec | Statistical Tests to Compare Curves with Recurrent Events |
nFactors | Parallel Analysis and Other Non Graphical Solutions to the Cattell Scree Test |
nFCA | Numerical Formal Concept Analysis for Systematic Clustering |
NFP | Network Fingerprint Framework in R |
NFWdist | The Standard Distribution Functions for the 3D NFW Profile |
NGBVS | Bayesian Variable Selection for SNP Data using Normal-Gamma |
ngram | Fast n-Gram 'Tokenization' |
ngramrr | A Simple General Purpose N-Gram Tokenizer |
ngspatial | Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data |
NGSSEML | Non-Gaussian State-Space with Exact Marginal Likelihood |
NHANES | Data from the US National Health and Nutrition Examination Study |
nhanesA | NHANES Data Retrieval |
nhdplusTools | NHDPlus Tools |
nhdR | Tools for working with the National Hydrography Dataset |
nhds | National Hospital Discharge Survey 2010 Data |
nhlapi | A Minimum-Dependency 'R' Interface to the 'NHL' API |
NHLData | Scores for Every Season Since the Founding of the NHL in 1917 |
nhlscrape | Scrapes the 'NHL' API for Statistical Analysis |
nhm | Non-Homogeneous Markov and Hidden Markov Multistate Models |
NHMM | Bayesian Non-Homogeneous Markov and Mixture Models for Multiple Time Series |
NHMSAR | Non-Homogeneous Markov Switching Autoregressive Models |
NHPoisson | Modelling and Validation of Non Homogeneous Poisson Processes |
nhs.predict | Breast Cancer Survival and Therapy Benefits |
NHSRdatasets | NHS and Healthcare-Related Data for Education and Training |
nhstplot | Plot Null Hypothesis Significance Tests |
nice | Get or Set UNIX Niceness |
nicheROVER | (Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches |
nichevol | Tools for Ecological Niche Evolution Assessment Considering Uncertainty |
NightDay | Night and Day Boundary Plot Function |
nilde | Nonnegative Integer Solutions of Linear Diophantine Equations with Applications |
nima | Nima Hejazi's R Toolbox |
nimble | MCMC, Particle Filtering, and Programmable Hierarchical Modeling |
nimbleEcology | Distributions for Ecological Models in 'nimble' |
nipals | Principal Components Analysis using NIPALS or Weighted EMPCA, with Gram-Schmidt Orthogonalization |
NipponMap | Japanese Map Data and Functions |
NIPTeR | Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing |
NIRStat | Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data |
NISTnls | Nonlinear least squares examples from NIST |
NISTunits | Fundamental Physical Constants and Unit Conversions from NIST |
NITPicker | Finds the Best Subset of Points to Sample |
nitrcbot | Download Image Files from the 'NeuroImaging Tools and Resources Collaboratory' |
NitrogenUptake2016 | Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata |
nivm | Noninferiority Tests with Variable Margins |
nixmass | Snow Water Equivalent Modeling with the 'Delta.snow' Model and Empirical Regression Models |
nJira | SQL Like Query Interface for 'Jira' |
nlaR | Interface to the National Lakes Assessment |
NlcOptim | Solve Nonlinear Optimization with Nonlinear Constraints |
nlcv | Nested Loop Cross Validation |
nleqslv | Solve Systems of Nonlinear Equations |
nlgeocoder | Geocoding for the Netherlands |
NlinTS | Models for Non Linear Causality Detection in Time Series |
nlirms | Non-Life Insurance Rate-Making System |
nlist | Lists of Numeric Atomic Objects |
nlme | Linear and Nonlinear Mixed Effects Models |
nlmeODE | Non-linear mixed-effects modelling in nlme using differential equations |
nlmeU | Datasets and utility functions enhancing functionality of nlme package |
nlmixr | Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics |
nlmm | Generalized Laplace Mixed-Effects Models |
NLMR | Simulating Neutral Landscape Models |
nlmrt | Functions for Nonlinear Least Squares Solutions |
nlMS | Non-Linear Model Selection |
nloptr | R Interface to NLopt |
NLP | Natural Language Processing Infrastructure |
NLPclient | Stanford 'CoreNLP' Annotation Client |
nlpred | Estimators of Non-Linear Cross-Validated Risks Optimized for Small Samples |
NLPutils | Natural Language Processing Utilities |
nlraa | Nonlinear Regression for Agricultural Applications |
nlreg | Higher Order Inference for Nonlinear Heteroscedastic Models |
NLRoot | searching for the root of equation |
nlrr | Non-Linear Relative Risk Estimation and Plotting |
nlrx | Setup, Run and Analyze 'NetLogo' Model Simulations from 'R' via 'XML' |
nls.multstart | Robust Non-Linear Regression using AIC Scores |
nls2 | Non-linear regression with brute force |
nlsem | Fitting Structural Equation Mixture Models |
nlshelper | Convenient Functions for Non-Linear Regression |
nlshrink | Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices |
nlsMicrobio | Nonlinear regression in predictive microbiology |
nlsmsn | Fitting Nonlinear Models with Scale Mixture of Skew-Normal Distributions |
nlsr | Functions for Nonlinear Least Squares Solutions |
nlsrk | Runge-Kutta Solver for Function nls() |
nlstools | Tools for Nonlinear Regression Analysis |
NlsyLinks | Utilities and Kinship Information for Research with the NLSY |
nlt | A Nondecimated Lifting Transform for Signal Denoising |
nltm | Non-Linear Transformation Models |
nlts | Nonlinear Time Series Analysis |
nLTT | Calculate the NLTT Statistic |
nlWaldTest | Wald Test of Nonlinear Restrictions and Nonlinear CI |
nmadb | Network Meta-Analysis Database API |
NMADiagT | Network Meta-Analysis of Multiple Diagnostic Tests |
nmaINLA | Network Meta-Analysis using Integrated Nested Laplace Approximations |
NMAoutlier | Detecting Outliers in Network Meta-Analysis |
nmathresh | Thresholds and Invariant Intervals for Network Meta-Analysis |
NMF | Algorithms and Framework for Nonnegative Matrix Factorization (NMF) |
nmfgpu4R | Non-Negative Matrix Factorization (NMF) using CUDA |
NMFN | Non-negative Matrix Factorization |
NMI | Normalized Mutual Information of Community Structure in Network |
Nmisc | Miscellaneous Functions Used at 'Numeract LLC' |
nmixgof | Goodness of Fit Checks for Binomial N-Mixture Models |
NMOF | Numerical Methods and Optimization in Finance |
nmslibR | Non Metric Space (Approximate) Library |
NMVANOVA | Novice Model Variation ANOVA |
nmw | Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics |
nna | Nearest-Neighbor Analysis |
nnet | Feed-Forward Neural Networks and Multinomial Log-Linear Models |
nnetpredint | Prediction Intervals of Multi-Layer Neural Networks |
nnfor | Time Series Forecasting with Neural Networks |
nnGarrote | Non-Negative Garrote Estimation with Penalized Initial Estimators |
nngeo | k-Nearest Neighbor Join for Spatial Data |
nnlasso | Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models |
nnlib2Rcpp | A Collection of Neural Networks |
nnls | The Lawson-Hanson algorithm for non-negative least squares (NNLS) |
NNMIS | Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates |
NNS | Nonlinear Nonparametric Statistics |
nnt | The Number Needed to Treat (NNT) for Survival Endpoint |
NNTbiomarker | Calculate Design Parameters for Biomarker Validation Studies |
nnTensor | Non-Negative Tensor Decomposition |
nntrf | Supervised Data Transformation by Means of Neural Network Hidden Layer |
noaaoceans | Collect Ocean Data from NOAA |
noaastormevents | Explore NOAA Storm Events Database |
NobBS | Nowcasting by Bayesian Smoothing |
noctua | Connect to 'AWS Athena' using R 'AWS SDK' 'paws' ('DBI' Interface) |
nodbi | 'NoSQL' Database Connector |
nodeHarvest | Node Harvest for Regression and Classification |
nodiv | Compares the Distribution of Sister Clades Through a Phylogeny |
nofrills | Low-Cost Anonymous Functions |
noia | Implementation of the Natural and Orthogonal InterAction (NOIA) model |
noise | Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data |
NoiseFiltersR | Label Noise Filters for Data Preprocessing in Classification |
noisyCE2 | Cross-Entropy Optimisation of Noisy Functions |
nombre | Number Names |
nomclust | Hierarchical Cluster Analysis of Nominal Data |
NominalLogisticBiplot | Biplot representations of categorical data |
nomisr | Access 'Nomis' UK Labour Market Data |
nomnoml | Sassy 'UML' Diagrams |
nomogramEx | Extract Equations from a Nomogram |
nomogramFormula | Calculate Total Points and Probabilities for Nomogram |
NonCompart | Noncompartmental Analysis for Pharmacokinetic Data |
noncompliance | Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model |
noncomplyR | Bayesian Analysis of Randomized Experiments with Non-Compliance |
nonet | Weighted Average Ensemble without Training Labels |
nonlinearICP | Invariant Causal Prediction for Nonlinear Models |
NonlinearTSA | Nonlinear Time Series Analysis |
nonlinearTseries | Nonlinear Time Series Analysis |
nonmem2R | Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots |
nonmemica | Create and Evaluate NONMEM Models in a Project Context |
nonneg.cg | Non-Negative Conjugate-Gradient Minimizer |
nonnest2 | Tests of Non-Nested Models |
NonNorMvtDist | Multivariate Lomax (Pareto Type II) and Its Related Distributions |
nonpar | A Collection of Nonparametric Hypothesis Tests |
nonparaeff | Nonparametric Methods for Measuring Efficiency and Productivity |
Nonpareil | Metagenome Coverage Estimation and Projections for 'Nonpareil' |
NonpModelCheck | Model Checking and Variable Selection in Nonparametric Regression |
NonProbEst | Estimation in Nonprobability Sampling |
nontarget | Detecting Isotope, Adduct and Homologue Relations in LC-MS Data |
nontargetData | Quantized simulation data of isotope pattern centroids |
nopaco | Non-Parametric Concordance Coefficient |
nopp | Nash Optimal Party Positions |
nor1mix | Normal aka Gaussian (1-d) Mixture Models (S3 Classes and Methods) |
nord | Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes for 'ggplot2' |
nordklimdata1 | Dataset for Climate Analysis with Data from the Nordic Region |
norm | Analysis of multivariate normal datasets with missing values |
NORMA | Builds General Noise SVRs |
NormalBetaPrime | Normal Beta Prime Prior |
NormalGamma | Normal-gamma convolution model |
NormalLaplace | The Normal Laplace Distribution |
normalp | Routines for Exponential Power Distribution |
normalr | Normalisation of Multiple Variables in Large-Scale Datasets |
NormExpression | Normalize Gene Expression Data using Evaluated Methods |
NormPsy | Normalisation of Psychometric Tests |
NORMT3 | Evaluates complex erf, erfc, Faddeeva, and density of sum of Gaussian and Student's t |
normtest | Tests for Normality |
normwhn.test | Normality and White Noise Testing |
norris | All of Your Chuck Norris Needs |
nortest | Tests for Normality |
nortestARMA | Neyman Smooth Tests of Normality for the Errors of ARMA Models |
nortsTest | Assessing Normality of Stationary Process |
nos | Compute Node Overlap and Segregation in Ecological Networks |
nose | nose Package for R |
nosoi | A Forward Agent-Based Transmission Chain Simulator |
NostalgiR | Advanced Text-Based Plots |
not | Narrowest-Over-Threshold Change-Point Detection |
notifyme | Send Alerts to your Cellphone and Phillips Hue Lights |
notifyR | Send push notifications to your smartphone via pushover.net (ACCOUNT REQUIRED!) |
nowcasting | Predicting Economic Variables using Dynamic Factor Models |
noweb | The 'noweb' System for R |
Nozzle.R1 | Nozzle Reports |
np | Nonparametric Kernel Smoothing Methods for Mixed Data Types |
nparACT | Non-Parametric Measures of Actigraphy Data |
nparcomp | Multiple Comparisons and Simultaneous Confidence Intervals |
nparLD | Nonparametric Analysis of Longitudinal Data in Factorial Experiments |
nparMD | Nonparametric Analysis of Multivariate Data in Factorial Designs |
nparsurv | Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data |
NPBayesImputeCat | Non-Parametric Bayesian Multiple Imputation for Categorical Data |
npbr | Nonparametric Boundary Regression |
NPC | Nonparametric Combination of Hypothesis Tests |
NPCD | Nonparametric Methods for Cognitive Diagnosis |
NPCirc | Nonparametric Circular Methods |
npcopTest | Non Parametric Test for Detecting Changes in the Copula |
npcp | Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations |
npcure | Nonparametric Estimation in Mixture Cure Models |
npExact | Exact Nonparametric Hypothesis Tests for the Mean, Variance and Stochastic Inequality |
NPflow | Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data |
nph | Planning and Analysing Survival Studies under Non-Proportional Hazards |
NPHazardRate | Nonparametric Hazard Rate Estimation |
NPHMC | Sample Size Calculation for the Proportional Hazards Mixture Cure Model |
npIntFactRep | Nonparametric Interaction Tests for Factorial Designs with Repeated Measures |
nplplot | Plotting linkage and association results |
nplr | N-Parameter Logistic Regression |
npmlda | Nonparametric Models for Longitudinal Data |
NPMLEcmprsk | Type-Specific Failure Rate and Hazard Rate on Competing Risks Data |
NPMLENCC | Non-Parametric Maximum Likelihood Estimate for Cohort Samplings |
npmlreg | Nonparametric Maximum Likelihood Estimation for Random Effect Models |
npmr | Nuclear Penalized Multinomial Regression |
npmv | Nonparametric Comparison of Multivariate Samples |
NPMVCP | Nonparametric Multivariate Change Point Model |
npordtests | Nonparametric Tests for Equality of Location Against Ordered Alternatives |
NPP | Normalized Power Prior Bayesian Analysis |
nppbib | Nonparametric Partially-Balanced Incomplete Block Design Analysis |
npphen | Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data |
nprcgenekeepr | Genetic Tools for Colony Management |
npreg | Nonparametric Regression via Smoothing Splines |
npregderiv | Nonparametric Estimation of the Derivatives of a Regression Function |
npregfast | Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions |
nprobust | Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation |
nproc | Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves |
npROCRegression | Kernel-Based Nonparametric ROC Regression Modelling |
nprotreg | Nonparametric Rotations for Sphere-Sphere Regression |
NPS | Convenience Functions and Tests for Working With the Net Promoter Score (NPS) |
npsf | Nonparametric and Stochastic Efficiency and Productivity Analysis |
NPsimex | Nonparametric Smoothing for contaminated data using Simulation-Extrapolation |
npsm | Package for Nonparametric Statistical Methods using R |
npsr | Validate Instrumental Variables using NPS |
npst | Generalization of Hewitt's Seasonality Test |
npsurvSS | Sample Size and Power Calculation for Common Non-Parametric Tests in Survival Analysis |
nptest | Nonparametric Tests |
NRejections | Metrics for Multiple Testing with Correlated Outcomes |
nricens | NRI for Risk Prediction Models with Time to Event and Binary Response Data |
nsapi | Connect to the NS (Dutch Railways) API |
nsarfima | Methods for Fitting and Simulating Non-Stationary ARFIMA Models |
nscancor | Non-Negative and Sparse CCA |
NScluster | Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models |
nse | Numerical Standard Errors Computation in R |
nse2r | Fetch Data from 'National Stock Exchange (India)' |
nseval | A Clean API for Lazy and Non-Standard Evaluation |
nsga2R | Elitist Non-dominated Sorting Genetic Algorithm based on R |
nsga3 | An Implementation of Non-Dominated Sorting Genetic Algorithm III for Feature Selection |
nsgp | Non-Stationary Gaussian Process Regression |
NSM3 | Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition |
NSO1212 | National Statistical Office of Mongolia's Open Data API Handler |
nsprcomp | Non-Negative and Sparse PCA |
nsRFA | Non-Supervised Regional Frequency Analysis |
nsROC | Non-Standard ROC Curve Analysis |
nsrr | Interface to National Sleep Research Resource |
NST | Normalized Stochasticity Ratio |
NSUM | Network Scale Up Method |
NTS | Nonlinear Time Series Analysis |
nucim | Nucleome Imaging Toolbox |
NUCOMBog | NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate |
nullabor | Tools for Graphical Inference |
numbers | Number-Theoretic Functions |
numbersBR | Validate, Compare and Format Identification Numbers from Brazil |
numDeriv | Accurate Numerical Derivatives |
Numero | Statistical Framework to Define Subgroups in Complex Datasets |
numform | Tools to Format Numbers for Publication |
numGen | Number Series Generator |
numKM | Create a Kaplan-Meier Plot with Numbers at Risk |
numOSL | Numeric Routines for Optically Stimulated Luminescence Dating |
NutrienTrackeR | Food Composition Information and Dietary Assessment |
nutriNetwork | Structure Learning with Copula Graphical Model |
NVCSSL | Nonparametric Varying Coefficient Spike-and-Slab Lasso |
nvctr | The n-vector Approach to Geographical Position Calculations using an Ellipsoidal Model of Earth |
nVennR | Create n-Dimensional, Quasi-Proportional Venn Diagrams |
nvmix | Multivariate Normal Variance Mixtures |
nws | R functions for NetWorkSpaces and Sleigh |
nycflights13 | Flights that Departed NYC in 2013 |
nzelect | New Zealand Election Data |
nzilbb.labbcat | Accessing Data Stored in 'LaBB-CAT' Instances |
nzpullover | Driving Offences in New Zealand Between 2009 and 2016 |
oaColors | OpenAnalytics Colors Package |
oai | General Purpose 'Oai-PMH' Services Client |
OAIHarvester | Harvest Metadata Using OAI-PMH Version 2.0 |
oaPlots | OpenAnalytics Plots Package |
oaqc | Computation of the Orbit-Aware Quad Census |
Oarray | Arrays with Arbitrary Offsets |
oasis | Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI) |
OasisR | Outright Tool for the Analysis of Spatial Inequalities and Segregation |
oaxaca | Blinder-Oaxaca Decomposition |
obAnalytics | Limit Order Book Analytics |
OBASpatial | Objective Bayesian Analysis for Spatial Regression Models |
obfuscatoR | Obfuscation Game Designs |
objectProperties | A factory of self-describing properties |
objectremover | 'RStudio' Addin for Removing Objects from the Global Environment Based on Patterns and Object Type |
objectSignals | objectSignals |
obliqueRF | Oblique Random Forests from Recursive Linear Model Splits |
obliqueRSF | Oblique Random Forests for Right-Censored Time-to-Event Data |
OBMbpkg | Estimate the Population Size for the Mb Capture-Recapture Model |
obs.agree | An R package to assess agreement between observers |
Observation | Collect and Process Physical Activity Direct Observation Data |
observer | Observe and Check your Data |
OBsMD | Objective Bayesian Model Discrimination in Follow-Up Designs |
obsSens | Sensitivity analysis for Observational studies |
oc | Optimal Classification Roll Call Analysis Software |
OCA | Optimal Capital Allocations |
occ | Estimates PET Neuroreceptor Occupancies |
ocd | High-Dimensional Multiscale Online Changepoint Detection |
oce | Analysis of Oceanographic Data |
oceanis | Cartography for Statistical Analysis |
oceanmap | A Plotting Toolbox for 2D Oceanographic Data |
OceanView | Visualisation of Oceanographic Data and Model Output |
oceanwaves | Ocean Wave Statistics |
ocedata | Oceanographic Data Sets for 'oce' Package |
ockc | Order Constrained Solutions in k-Means Clustering |
oclust | Gaussian Model-Based Clustering with Outliers |
OCNet | Optimal Channel Networks |
ocomposition | Regression for Rank-Indexed Compositional Data |
ocp | Bayesian Online Changepoint Detection |
ocs4R | Interface to Open Collaboration Services (OCS) REST API |
OData | R Helper for OData Web Services |
ODB | Open Document Databases (.odb) Management |
odbc | Connect to ODBC Compatible Databases (using the DBI Interface) |
odds.converter | Betting Odds Conversion |
odds.n.ends | Odds Ratios, Contingency Table, and Model Significance from a Generalized Linear Model Object |
oddsratio | Odds Ratio Calculation for GAM(M)s & GLM(M)s |
oddstream | Outlier Detection in Data Streams |
odeintr | C++ ODE Solvers Compiled on-Demand |
ODEnetwork | Network of Differential Equations |
ODEsensitivity | Sensitivity Analysis of Ordinary Differential Equations |
odin | ODE Generation and Integration |
odk | Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame |
odpc | One-Sided Dynamic Principal Components |
odr | Optimal Design and Statistical Power of Multilevel Randomized Trials |
ODS | Statistical Methods for Outcome-Dependent Sampling Designs |
OECD | Search and Extract Data from the OECD |
oem | Orthogonalizing EM: Penalized Regression for Big Tall Data |
oenb | Tools for the OeNB Data Web Service |
officedown | Enhanced 'R Markdown' Format for 'Word' and 'PowerPoint' |
officer | Manipulation of Microsoft Word and PowerPoint Documents |
offlineChange | Detect Multiple Change Points from Time Series |
ofGEM | A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data |
OGI | Objective General Index |
oglmx | Estimation of Ordered Generalized Linear Models |
ohenery | Modeling of Ordinal Random Variables via Softmax Regression |
Ohit | OGA+HDIC+Trim and High-Dimensional Linear Regression Models |
OHPL | Ordered Homogeneity Pursuit Lasso for Group Variable Selection |
ohtadstats | Tomoka Ohta D Statistics |
OIdata | Data sets and supplements (OpenIntro) |
oii | Crosstab and Statistical Tests for OII MSc Stats Course |
OjaNP | Multivariate Methods Based on the Oja Median and Related Concepts |
ojsr | Crawler and Scraper for Open Journal System ('OJS') |
okcupiddata | OkCupid Profile Data for Introductory Statistics and Data Science Courses |
okmesonet | Retrieve Oklahoma Mesonet climatological data |
olctools | Open Location Code Handling in R |
OligoSpecificitySystem | Oligo Specificity System |
ollggamma | Odd Log-Logistic Generalized Gamma Probability Distribution |
olr | Optimal Linear Regression |
OLScurve | OLS growth curve trajectories |
olsrr | Tools for Building OLS Regression Models |
omd | filter the molecular descriptors for QSAR |
OmicKriging | Poly-Omic Prediction of Complex TRaits |
omics | '–omics' Data Analysis Toolbox |
OmicsPLS | Data Integration with Two-Way Orthogonal Partial Least Squares |
omicwas | Cell-Type-Specific Association Testing in Bulk Omics Experiments |
Omisc | Univariate Bootstrapping and Other Things |
OmnibusFisher | A Modified Fisher’s Method to Test Overall Gene-Level Effect |
omopr | OMOP CDM Databases using the Tidyverse |
ompr | Model and Solve Mixed Integer Linear Programs |
ompr.roi | A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI') |
omu | A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection |
OnAge | Test of Between-Group Differences in the Onset of Senescence |
OncoBayes2 | Bayesian Logistic Regression for Oncology Dose-Escalation Trials |
oncomodel | Maximum likelihood tree models for oncogenesis |
Oncotree | Estimating oncogenetic trees |
oncrawlR | Machine Learning for S.E.O |
OneArmPhaseTwoStudy | Planning, Conducting, and Analysing Single-Arm Phase II Studies |
onehot | Fast Onehot Encoding for Data.frames |
onelogin | Interact with the 'OneLogin' API |
onemap | Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses |
onemapsgapi | R Wrapper for the 'OneMap.Sg API' |
OneR | One Rule Machine Learning Classification Algorithm with Enhancements |
OneStep | One-Step Maximum Likelihood Estimation |
ONETr | Efficient Authenticated Interaction with the O*NET API |
OneTwoSamples | Deal with one and two (normal) samples |
onewaytests | One-Way Tests in Independent Groups Designs |
onion | Octonions and Quaternions |
onlineCOV | Online Change Point Detection in High-Dimensional Covariance Structure |
onlinePCA | Online Principal Component Analysis |
onlineVAR | Online Fitting of Time-Adaptive Lasso Vector Auto Regression |
onls | Orthogonal Nonlinear Least-Squares Regression |
onnx | R Interface to 'ONNX' |
ontologyIndex | Functions for Reading Ontologies into R |
ontologyPlot | Functions for Visualising Sets of Ontological Terms |
ontologySimilarity | Functions for Calculating Ontological Similarities |
OOBCurve | Out of Bag Learning Curve |
oolong | Create Validation Tests for Automated Content Analysis |
OOmisc | Ozgur-Ozlem Miscellaneous |
oompaBase | Class Unions, Matrix Operations, and Color Schemes for OOMPA |
oompaData | Data to Illustrate OOMPA Algorithms |
OOR | Optimistic Optimization in R |
opalr | 'Opal' Data Repository Client and 'DataSHIELD' Utils |
OpasnetUtils | Opasnet Modelling Environment Utility Functions |
OPDOE | Optimal Design of Experiments |
openadds | Client to Access 'Openaddresses' Data |
openair | Tools for the Analysis of Air Pollution Data |
openblender | Request <https://openblender.io> API Services |
opencage | Interface to the OpenCage API |
opencastR | 'Opencast' External API Package |
OpenCL | Interface allowing R to use OpenCL |
opencpu | Producing and Reproducing Results |
openCR | Open Population Capture-Recapture |
opencv | Bindings to 'OpenCV' Computer Vision Library |
opendatatoronto | Access the City of Toronto Open Data Portal |
opendotaR | Interface for OpenDota API |
openEBGM | EBGM Disproportionality Scores for Adverse Event Data Mining |
OpenImageR | An Image Processing Toolkit |
openintro | Data Sets and Supplemental Functions from 'OpenIntro' Textbooks and Labs |
OpenLand | Quantitative Analysis and Visualization of LUCC |
openmetrics | A 'Prometheus' Client for R Using the 'OpenMetrics' Format |
OpenML | Open Machine Learning and Open Data Platform |
OpenMPController | Control Number of OpenMP Threads Dynamically |
OpenMx | Extended Structural Equation Modelling |
openNLP | Apache OpenNLP Tools Interface |
openNLPdata | Apache OpenNLP Jars and Basic English Language Models |
OpenRepGrid | Tools to Analyze Repertory Grid Data |
OpenRepGrid.ic | Interpretive Clustering for Repertory Grids |
openssl | Toolkit for Encryption, Signatures and Certificates Based on OpenSSL |
openSTARS | An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS' |
OpenStreetMap | Access to Open Street Map Raster Images |
opentraj | Tools for Creating and Analysing Air Trajectory Data |
opentripplanner | Setup and connect to 'OpenTripPlanner' |
openVA | Automated Method for Verbal Autopsy |
openxlsx | Read, Write and Edit xlsx Files |
opera | Online Prediction by Expert Aggregation |
operator.tools | Utilities for Working with R's Operators |
operators | Additional Binary Operators |
OPI | Open Perimetry Interface |
Opportunistic | Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network |
oppr | Optimal Project Prioritization |
ops | Optimal Power Space Transformation |
Opt5PL | Optimal Designs for the 5-Parameter Logistic Model |
optAUC | Optimal Combinations of Diagnostic Tests Based on AUC |
optband | 'surv' Object Confidence Bands Optimized by Area |
optbdmaeAT | Optimal Block Designs for Two-Colour cDNA Microarray Experiments |
optBiomarker | Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules |
optCluster | Determine Optimal Clustering Algorithm and Number of Clusters |
optDesignSlopeInt | Optimal Designs for Estimating the Slope Divided by the Intercept |
optextras | Tools to Support Optimization Possibly with Bounds and Masks |
OptGS | Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes |
OptHedging | Estimation of value and hedging strategy of call and put options |
opticskxi | OPTICS K-Xi Density-Based Clustering |
opticut | Likelihood Based Optimal Partitioning and Indicator Species Analysis |
optifunset | Set Options if Unset |
optigrab | Command-Line Parsing for an R World |
optim.functions | Standard Benchmark Optimization Functions |
OptimalCutpoints | Computing Optimal Cutpoints in Diagnostic Tests |
OptimalDesign | A Toolbox for Computing Efficient Designs of Experiments |
optimalThreshold | Bayesian Methods for Optimal Threshold Estimation |
OptimalTiming | Optimal Timing Identification |
OptimaRegion | Confidence Regions for Optima |
optimbase | R port of the Scilab optimbase module |
optimCheck | Graphical and Numerical Checks for Mode-Finding Routines |
OptimClassifier | Create the Best Train for Classification Models |
optimization | Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints |
optimos.prime | Optimos Prime Helps Calculate Autoecological Data for Biological Species |
optimParallel | Parallel Version of the L-BFGS-B Optimization Method |
optimr | A Replacement and Extension of the 'optim' Function |
optimsimplex | R Port of the 'Scilab' Optimsimplex Module |
optimStrat | Choosing the Sample Strategy |
optimus | Model Based Diagnostics for Multivariate Cluster Analysis |
optimx | Expanded Replacement and Extension of the 'optim' Function |
OptInterim | Optimal Two and Three Stage Designs for Single-Arm and Two-Arm Randomized Controlled Trials with a Long-Term Binary Endpoint |
optinterv | Optimal Intervention |
optional | Optional Types and Pattern Matching |
OptionPricing | Option Pricing with Efficient Simulation Algorithms |
optionstrat | Utilizes the Black-Scholes Option Pricing Model to Perform Strategic Option Analysis and Plot Option Strategies |
optiRum | Financial Functions & More |
optiscale | Optimal Scaling |
optiSel | Optimum Contribution Selection and Population Genetics |
optiSolve | Linear, Quadratic, and Rational Optimization |
OptM | Estimating the Optimal Number of Migration Edges from 'Treemix' |
optmatch | Functions for Optimal Matching |
optparse | Command Line Option Parser |
optpart | Optimal Partitioning of Similarity Relations |
optR | Optimization Toolbox for Solving Linear Systems |
optrcdmaeAT | Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments |
optrees | Optimal Trees in Weighted Graphs |
OptSig | Optimal Level of Significance for Regression and Other Statistical Tests |
optweight | Targeted Stable Balancing Weights Using Optimization |
opusminer | OPUS Miner Algorithm for Filtered Top-k Association Discovery |
OpVaR | Statistical Methods for Modelling Operational Risk |
ora | Convenient Tools for Working with Oracle Databases |
orca | Computation of Graphlet Orbit Counts in Sparse Graphs |
ORCI | Several confidence intervals for the odds ratio |
orclus | Subspace Clustering Based on Arbitrarily Oriented Projected Cluster Generation |
ORCME | Order Restricted Clustering for Microarray Experiments |
Orcs | Omnidirectional R Code Snippets |
orcutt | Estimate Procedure in Case of First Order Autocorrelation |
ordcrm | Likelihood-Based Continual Reassessment Method (CRM) Dose Finding Designs |
ordDisp | Separating Location and Dispersion in Ordinal Regression Models |
orddom | Ordinal Dominance Statistics |
ORdensity | Identification of Differentially Expressed Genes |
ORDER2PARENT | Estimate parent distributions with data of several order statistics |
orderbook | Orderbook visualization/Charting software |
ordering | Test, Check, Verify, Investigate the Monotonic Properties of Vectors |
orderly | Lightweight Reproducible Reporting |
orders | Sampling from Order Statistics of New Families of Distributions |
orderstats | Efficiently Generates Random Order Statistic Variables |
OrdFacReg | Least Squares, Logistic, and Cox-Regression with Ordered Predictors |
ordiBreadth | Ordinated Diet Breadth |
ordinal | Regression Models for Ordinal Data |
ordinalClust | Ordinal Data Clustering, Co-Clustering and Classification |
ordinalCont | Ordinal Regression Analysis for Continuous Scales |
ordinalForest | Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables |
ordinalgmifs | Ordinal Regression for High-Dimensional Data |
ordinalLBM | Co-Clustering of Ordinal Data via Latent Continuous Random Variables |
OrdinalLogisticBiplot | Biplot representations of ordinal variables |
ordinalNet | Penalized Ordinal Regression |
ordinalpattern | Tests Based on Ordinal Patterns |
ordinalRR | Analysis of Repeatability and Reproducibility Studies with Ordinal Measurements |
OrdMonReg | Compute least squares estimates of one bounded or two ordered isotonic regression curves |
OrdNor | Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions |
ordPens | Selection and/or Smoothing of Ordinal Predictors |
ore | An R Interface to the Onigmo Regular Expression Library |
ores | Connector to the Objective Revision Evaluation Service (ORES) |
orf | Ordered Random Forests |
org | Organising Projects |
OrgMassSpecR | Organic Mass Spectrometry |
orgR | Analyse Text Files Created by Emacs' Org mode |
orgutils | Helper Functions for Org Files |
ORIClust | Order-restricted Information Criterion-based Clustering Algorithm |
orientlib | Support for Orientation Data |
origami | Generalized Framework for Cross-Validation |
OriGen | Fast Spatial Ancestry via Flexible Allele Frequency Surfaces |
originr | Fetch Species Origin Data from the Web |
ORION | Ordinal Relations |
orloca | Operations Research LOCational Analysis Models |
orloca.es | Spanish version of orloca package. Modelos de localizacion en investigacion operativa |
ORMDR | ORMDR |
ormPlot | Advanced Plotting of Ordinal Regression Models |
oro.dicom | Rigorous - DICOM Input / Output |
oro.nifti | Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output |
oro.pet | Rigorous - Positron Emission Tomography |
orQA | Order Restricted Assessment Of Microarray Titration Experiments |
orsifronts | Southern Ocean Frontal Distributions (Orsi) |
orsk | Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information |
orthoDr | Semi-Parametric Dimension Reduction Models Using Orthogonality Constrained Optimization |
orthogonalsplinebasis | Orthogonal B-Spline Basis Functions |
OrthoPanels | Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects |
orthopolynom | Collection of functions for orthogonal and orthonormal polynomials |
oRus | Operational Research User Stories |
osc | Orthodromic Spatial Clustering |
OscillatorGenerator | Generation of Customizable, Discretized Time Series of Oscillating Species |
OSCV | One-Sided Cross-Validation |
osd | Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data |
osDesign | Design and analysis of observational studies |
OSDR | Finds an Optimal System of Distinct Representatives |
osfr | Interface to the 'Open Science Framework' ('OSF') |
oshka | Recursive Quoted Language Expansion |
osmar | OpenStreetMap and R |
osmdata | Import 'OpenStreetMap' Data as Simple Features or Spatial Objects |
osmose | Object Oriented Simulator of Marine Ecosystems |
osmplotr | Bespoke Images of 'OpenStreetMap' Data |
OSMscale | Add a Scale Bar to 'OpenStreetMap' Plots |
OSNMTF | Orthogonal Sparse Non-Negative Matrix Tri-Factorization |
osqp | Quadratic Programming Solver using the 'OSQP' Library |
osrm | Interface Between R and the OpenStreetMap-Based Routing Service OSRM |
osrmr | Wrapper for the 'OSRM' API |
OSTSC | Over Sampling for Time Series Classification |
ot | 'Open Tracing' |
OTclust | Mean Partition, Uncertainty Assessment, Cluster Validation and Visualization Selection for Cluster Analysis |
OTE | Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation |
otinference | Inference for Optimal Transport |
otp | One Time Password Generation and Verification |
otpr | An R Wrapper for the 'OpenTripPlanner' REST API |
otrimle | Robust Model-Based Clustering |
OTRselect | Variable Selection for Optimal Treatment Decision |
otsad | Online Time Series Anomaly Detectors |
otuSummary | Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres |
OTUtable | North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions |
otvPlots | Over Time Variable Plots |
ouch | Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
outbreaker2 | Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data |
outbreaks | A Collection of Disease Outbreak Data |
outcomerate | AAPOR Survey Outcome Rates |
outForest | Multivariate Outlier Detection and Replacement |
OutlierDC | Outlier Detection using quantile regression for Censored Data |
OutlierDetection | Outlier Detection |
OutlierDM | Outlier Detection for Multi-replicated High-throughput Data |
outliers | Tests for outliers |
OutliersO3 | Draws Overview of Outliers (O3) Plots |
outliertree | Explainable Outlier Detection Through Decision Tree Conditioning |
OutrankingTools | Functions for Solving Multiple-criteria Decision-making Problems |
outreg | Regression Table for Publication |
outsider.base | Base Package for 'Outsider' |
OUwie | Analysis of Evolutionary Rates in an OU Framework |
ouxy | Model of Adaptive Trait Evolution |
overdisp | Overdispersion in Count Data Multiple Regression Analysis |
overlap | Estimates of Coefficient of Overlapping for Animal Activity Patterns |
overlapping | Estimation of Overlapping in Empirical Distributions |
overlapptest | Test Overlapping of Polygons Against Random Rotation |
overture | Tools for Writing MCMC |
overviewR | Easily Extracting Information About Your Data |
owd | Open Working Directory |
owdbr | Open Welfare Data Brazil |
OWEA | Optimal Weight Exchange Algorithm for Optimal Designs for Three Models |
OwenQ | Owen Q-Function |
owmr | OpenWeatherMap API Wrapper |
ows4R | Interface to OGC Web-Services (OWS) |
oxcAAR | Interface to 'OxCal' Radiocarbon Calibration |
oxcovid19 | An R API to the Oxford COVID-19 Database |
OxyBS | Processing of Oxy-Bisulfite Microarray Data |
oysteR | Scans R Projects for Vulnerable Third Party Dependencies |
oz | Plot the Australian Coastline and States |
ozmaps | Australia Maps |
p2distance | Welfare's Synthetic Indicator |
p3state.msm | Analyzing survival data |
pa | Performance Attribution for Equity Portfolios |
PabonLasso | Pabon Lasso Graphs and Comparing Situations of a Unit in Two Different Times |
PAC | Partition-Assisted Clustering and Multiple Alignments of Networks |
pacbpred | PAC-Bayesian Estimation and Prediction in Sparse Additive Models |
pack | Convert values to/from raw vectors |
packageDiff | Compare R Package Differences |
packagefinder | Comfortable Search for R Packages on CRAN Directly from the R Console |
packageRank | Computation and Visualization of Package Download Counts and Percentiles |
packagetrackr | Track R Package Downloads from RStudio's CRAN Mirror |
packcircles | Circle Packing |
packClassic | Toy example of Pack Classic |
packHV | A few Useful Functions for Statisticians |
packMBPLSDA | Multi-Block Partial Least Squares Discriminant Analysis |
packrat | A Dependency Management System for Projects and their R Package Dependencies |
packS4 | Toy Example of S4 Package |
PACLasso | Penalized and Constrained Lasso Optimization |
pacman | Package Management Tool |
paco | Procrustes Application to Cophylogenetic Analysis |
pacotest | Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas |
pact | Predictive Analysis of Clinical Trials |
PACVr | Plastome Assembly Coverage Visualization |
Pade | Padé Approximant Coefficients |
padr | Quickly Get Datetime Data Ready for Analysis |
paf | Attributable Fraction Function for Censored Survival Data |
pafdR | Book Companion for Processing and Analyzing Financial Data with R |
PAFit | Generative Mechanism Estimation in Temporal Complex Networks |
PAFway | Pairwise Association of Functional Annotations |
pagedown | Paginate the HTML Output of R Markdown with CSS for Print |
pagenum | Put Page Numbers on Graphics |
pageviews | An API Client for Wikimedia Traffic Data |
PAGI | The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways |
PAGWAS | Pathway Analysis Methods for Genomewide Association Data |
painter | Creation and Manipulation of Color Palettes |
paintmap | Plotting Paintmaps |
pairedCI | Confidence intervals for the ratio of locations and for the ratio of scales of two paired samples |
PairedData | Paired Data Analysis |
pairheatmap | A tool for comparing heatmaps |
pairsD3 | D3 Scatterplot Matrices |
PairViz | Visualization using Graph Traversal |
pairwise | Rasch Model Parameters by Pairwise Algorithm |
pairwiseCI | Confidence Intervals for Two Sample Comparisons |
pairwiseComparisons | Multiple Pairwise Comparison Tests |
PairwiseD | Pairing Up Units and Vectors in Panel Data Setting |
pak | Another Approach to Package Installation |
PakPC2017 | Pakistan Population Census 2017 |
PakPMICS2014Ch | Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan |
PakPMICS2014HH | Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan |
PakPMICS2014HL | Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan |
PakPMICS2014Wm | Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan |
PakPMICS2018 | Multiple Indicator Cluster Survey (MICS) 2017-18 Data for Punjab, Pakistan |
PakPMICS2018bh | Multiple Indicator Cluster Survey (MICS) 2017-18 Birth History of Children Questionnaire Data for Punjab, Pakistan |
PakPMICS2018fs | Multiple Indicator Cluster Survey (MICS) 2017-18 Children Age 5-17 Questionnaire Data for Punjab, Pakistan |
PakPMICS2018hh | Multiple Indicator Cluster Survey (MICS) 2017-18 Household Questionnaire Data for Punjab, Pakistan |
PakPMICS2018mm | Multiple Indicator Cluster Survey (MICS) 2017-18 Maternal Mortality Questionnaire Data for Punjab, Pakistan |
PakPMICS2018mn | Multiple Indicator Cluster Survey (MICS) 2017-18 Men Questionnaire Data for Punjab, Pakistan |
palaeoSig | Significance Tests for Palaeoenvironmental Reconstructions |
palasso | Paired Lasso Regression |
paleobioDB | Download and Process Data from the Paleobiology Database |
paleofire | Analysis of Charcoal Records from the Global Charcoal Database |
paleoMAS | Paleoecological Analysis |
paleomorph | Geometric Morphometric Tools for Paleobiology |
paleotree | Paleontological and Phylogenetic Analyses of Evolution |
paleoTS | Analyze Paleontological Time-Series |
paletteer | Comprehensive Collection of Color Palettes |
palettesForR | GPL Palettes Copied from 'Gimp' and 'Inkscape' |
palettetown | Use Pokemon Inspired Colour Palettes |
palinsol | Insolation for Palaeoclimate Studies |
palm | Fitting Point Process Models via the Palm Likelihood |
palmerpenguins | Palmer Archipelago (Antarctica) Penguin Data |
palmtree | Partially Additive (Generalized) Linear Model Trees |
palr | Colour Palettes for Data |
pals | Color Palettes, Colormaps, and Tools to Evaluate Them |
PAMA | Rank Aggregation with Partition Mallows Model |
pamctdp | Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns |
PAmeasures | Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data |
pamm | Power Analysis for Random Effects in Mixed Models |
pammtools | Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis |
pampe | Implementation of the Panel Data Approach Method for Program Evaluation |
pamr | Pam: Prediction Analysis for Microarrays |
pan | Multiple Imputation for Multivariate Panel or Clustered Data |
pAnalysis | Benchmarking and Rescaling R2 using Noise Percentile Analysis |
PanCanVarSel | Pan-Cancer Variable Selection |
PANDA | Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations |
pander | An R 'Pandoc' Writer |
pandocfilters | Pandoc Filters for R |
panelaggregation | Aggregate Longitudinal Survey Data |
panelAR | Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation |
PanelCount | Random Effects and/or Sample Selection Models for Panel Count Data |
Paneldata | Linear models for panel data |
PanelMatch | Matching Methods for Causal Inference with Time-Series Cross-Sectional Data |
panelr | Regression Models and Utilities for Repeated Measures and Panel Data |
panelvar | Panel Vector Autoregression |
panelView | Visualizing Panel Data |
panelWranglR | Panel Data Wrangling Tools |
pangaear | Client for the 'Pangaea' Database |
PanJen | A Semi-Parametric Test for Specifying Functional Form |
papayar | View Medical Research Images using the Papaya JavaScript Library |
papeR | A Toolbox for Writing Pretty Papers and Reports |
paperplanes | Distance Recordings from a Paper Plane Folding/Flying Experiment |
parade | Pen's Income Parades |
paradox | Define and Work with Parameter Spaces for Complex Algorithms |
parallelDist | Parallel Distance Matrix Computation using Multiple Threads |
ParallelLogger | Support for Parallel Computation, Logging, and Function Automation |
parallelMap | Unified Interface to Parallelization Back-Ends |
parallelML | A Parallel-Voting Algorithm for many Classifiers |
ParallelPC | Paralellised Versions of Constraint Based Causal Discovery Algorithms |
parallelSVM | A Parallel-Voting Version of the Support-Vector-Machine Algorithm |
ParallelTree | Visualizing Multilevel Data |
parameters | Processing of Model Parameters |
paramGUI | A Shiny GUI for some Parameter Estimation Examples |
ParamHelpers | Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning |
paramhetero | Numeric and Visual Comparisons of Heterogeneity in Parametric Models |
paramlink | Parametric Linkage and Other Pedigree Analysis in R |
params | Simplify Parameters |
paramtest | Run a Function Iteratively While Varying Parameters |
paran | Horn's Test of Principal Components/Factors |
ParBayesianOptimization | Parallel Bayesian Optimization of Hyperparameters |
parboost | Distributed Model-Based Boosting |
parcats | Interactive Parallel Categories Diagrams for 'easyalluvial' |
parcoords | 'Htmlwidget' for 'd3.js' Parallel Coordinates Chart |
ParDNAcopy | Parallel implementation of the "segment" function of package "DNAcopy" |
Pareto | The Pareto, Piecewise Pareto and Generalized Pareto Distribution |
ParetoPosStable | Computing, Fitting and Validating the PPS Distribution |
parfm | Parametric Frailty Models |
parlitools | Tools for Analysing UK Politics |
parma | Portfolio Allocation and Risk Management Applications |
parmigene | Parallel Mutual Information Estimation for Gene Network Reconstruction |
parmsurvfit | Parametric Models for Survival Data |
paropt | Parameter Optimizing of ODE-Systems |
parsec | Partial Orders in Socio-Economics |
parsedate | Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats |
parsemsf | Parse ThermoFisher MSF Files and Estimate Protein Abundances |
parsetools | Parse Tools |
parSim | Parallel Simulation Studies |
parsnip | A Common API to Modeling and Analysis Functions |
PartCensReg | Estimation and Diagnostics for Partially Linear Censored Regression Models Based on Heavy-Tailed Distributions |
partDSA | Partitioning Using Deletion, Substitution, and Addition Moves |
partialAR | Partial Autoregression |
partialCI | Partial Cointegration |
Partiallyoverlapping | Partially Overlapping Samples Tests |
partialOR | Partial Odds Ratio |
particles | A Graph Based Particle Simulator Based on D3-Force |
partition | Agglomerative Partitioning Framework for Dimension Reduction |
partitionBEFsp | Methods for Calculating the Loreau & Hector 2001 BEF Partition |
partitionComparison | Implements Measures for the Comparison of Two Partitions |
partitionMap | Partition Maps |
partitionMetric | Compute a distance metric between two partitions of a set |
partitions | Additive Partitions of Integers |
partools | Tools for the 'Parallel' Package |
partsm | Periodic Autoregressive Time Series Models |
party | A Laboratory for Recursive Partytioning |
partykit | A Toolkit for Recursive Partytioning |
parviol | Parviol |
parzer | Parse Messy Geographic Coordinates |
PAS | Polygenic Analysis System (PAS) |
PASenseWear | Summarize Daily Physical Activity from 'SenseWear' Accelerometer Data |
pass.lme | Power and Sample Size for Linear Mixed Effect Models |
PASSED | Calculate Power and Sample Size for Two Sample Mean Tests |
PAsso | Assessing the Partial Association Between Ordinal Variables |
passport | Travel Smoothly Between Country Name and Code Formats |
passt | Probability Associator Time (PASS-T) |
password | Create Random Passwords |
pastecs | Package for Analysis of Space-Time Ecological Series |
pastis | Phylogenetic Assembly with Soft Taxonomic Inferences |
PASWR | PROBABILITY and STATISTICS WITH R |
PASWR2 | Probability and Statistics with R, Second Edition |
patchDVI | Package to Patch '.dvi' or '.synctex' Files |
patchSynctex | Communication Between Editor and Viewer for Literate Programs |
patchwork | The Composer of Plots |
patentsview | An R Client to the 'PatentsView' API |
pathdiagram | Basic Functions for Drawing Path Diagrams |
pathfindR | Enrichment Analysis Utilizing Active Subnetworks |
pathfindR.data | Data Package for 'pathfindR' |
pathlibr | OO Path Manipulation in R |
pathmapping | Compute Deviation and Correspondence Between Spatial Paths |
paths | An Imputation Approach to Estimating Path-Specific Causal Effects |
PathSelectMP | Backwards Variable Selection for Paths using M Plus |
patPRO | Visualizing Temporal Microbiome Data |
patrick | Parameterized Unit Testing |
patternator | Feature Extraction from Female Brown Anole Lizard Dorsal Patterns |
PatternClass | Class-Focused Pattern Metric Comparisons using Simulation |
patternize | Quantification of Color Pattern Variation |
patternplot | Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots using Patterns, Colors and Images |
Patterns | Deciphering Biological Networks with Patterned Heterogeneous Measurements |
PAutilities | Streamline Physical Activity Research |
pauwels2014 | Bayesian Experimental Design for Systems Biology |
pavo | Perceptual Analysis, Visualization and Organization of Spectral Colour Data |
pawacc | Physical Activity with Accelerometers |
PAWL | Implementation of the PAWL algorithm |
paws | Amazon Web Services Software Development Kit |
paws.analytics | Amazon Web Services Analytics Services |
paws.application.integration | Amazon Web Services Application Integration Services |
paws.common | Paws Low-Level Amazon Web Services API |
paws.compute | Amazon Web Services Compute Services |
paws.cost.management | Amazon Web Services Cost Management Services |
paws.customer.engagement | Amazon Web Services Customer Engagement Services |
paws.database | Amazon Web Services Database Services |
paws.machine.learning | Amazon Web Services Machine Learning Services |
paws.management | Amazon Web Services Management & Governance Services |
paws.networking | Amazon Web Services Networking & Content Delivery Services |
paws.security.identity | Amazon Web Services Security, Identity, & Compliance Services |
paws.storage | Amazon Web Services Storage Services |
pbapply | Adding Progress Bar to '*apply' Functions |
pbatR | Pedigree/Family-Based Genetic Association Tests Analysis and Power |
PBD | Protracted Birth-Death Model of Diversification |
pbdBASE | Programming with Big Data – Base Wrappers for Distributed Matrices |
pbdMPI | Programming with Big Data – Interface to MPI |
pbdNCDF4 | Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files |
pbdPROF | Programming with Big Data – MPI Profiling Tools |
pbdRPC | Programming with Big Data – Remote Procedure Call |
pbdSLAP | Programming with Big Data – Scalable Linear Algebra Packages |
pbdZMQ | Programming with Big Data – Interface to 'ZeroMQ' |
PBIBD | Partially Balanced Incomplete Block Designs |
PBImisc | A Set of Datasets Used in My Classes or in the Book 'Modele Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych' |
pbivnorm | Vectorized Bivariate Normal CDF |
pbixr | Access Data and Metadata from 'Microsoft' 'Power BI' Documents |
pbkrtest | Parametric Bootstrap and Kenward Roger Based Methods for Mixed Model Comparison |
pbm | Protein Binding Models |
pbmcapply | Tracking the Progress of Mc*pply with Progress Bar |
PBNPA | Permutation Based Non-Parametric Analysis of CRISPR Screen Data |
pbo | Probability of Backtest Overfitting |
pBrackets | Plot Brackets |
PBRF | The Probability of Being in Response Function and Its Variance Estimates |
pbs | Periodic B Splines |
PBSadmb | ADMB for R Using Scripts or GUI |
PBSddesolve | Solver for Delay Differential Equations |
PBSmapping | Mapping Fisheries Data and Spatial Analysis Tools |
PBSmodelling | GUI Tools Made Easy: Interact with Models and Explore Data |
pbv | Probabilities for Bivariate Normal Distribution |
pca3d | Three Dimensional PCA Plots |
PCA4TS | Segmenting Multiple Time Series by Contemporaneous Linear Transformation |
PCA4you | PCA Plotting in a User Friendly Way |
pcaBootPlot | Create 2D Principal Component Plots with Bootstrapping |
pcadapt | Fast Principal Component Analysis for Outlier Detection |
PCADSC | Tools for Principal Component Analysis-Based Data Structure Comparisons |
pcal | Calibration of P-Values for Point Null Hypothesis Testing |
pcaL1 | L1-Norm PCA Methods |
pcalg | Methods for Graphical Models and Causal Inference |
pCalibrate | Bayesian Calibrations of p-Values |
pcalls | Pricing of Different Types of Call |
PCAmatchR | Match Cases to Controls Based on Genotype Principal Components |
PCAmixdata | Multivariate Analysis of Mixed Data |
pcaPP | Robust PCA by Projection Pursuit |
pccc | Pediatric Complex Chronic Conditions |
PCDimension | Finding the Number of Significant Principal Components |
pcdpca | Dynamic Principal Components for Periodically Correlated Functional Time Series |
pcds | Proximity Catch Digraphs and Their Applications |
PCDSpline | Semiparametric regression analysis of panel count data using monotone splines |
pcensmix | Model Fitting to Progressively Censored Mixture Data |
pcev | Principal Component of Explained Variance |
pcFactorStan | Stan Models for the Paired Comparison Factor Model |
PCFAM | Computation of Ancestry Scores with Mixed Families and Unrelated Individuals |
pcg | Preconditioned Conjugate Gradient Algorithm for solving Ax=b |
pcgen | Reconstruction of Causal Networks for Data with Random Genetic Effects |
PCGSE | Principal Component Gene Set Enrichment |
pch | Piecewise Constant Hazards Models for Censored and Truncated Data |
pchc | Bayesian Network Learning with the PCHC Algorithm |
PCICt | Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
pcIRT | IRT Models for Polytomous and Continuous Item Responses |
pcmabc | Approximate Bayesian Computations for Phylogenetic Comparative Methods |
PCMBase | Simulation and Likelihood Calculation of Phylogenetic Comparative Models |
PCMBaseCpp | Fast Likelihood Calculation for Phylogenetic Comparative Models |
PCMRS | Model Response Styles in Partial Credit Models |
pcnetmeta | Patient-Centered Network Meta-Analysis |
pco | Panel Cointegration Tests |
pCODE | Estimation of an Ordinary Differential Equation Model by Parameter Cascade Method |
PCovR | Principal Covariates Regression |
PCPS | Principal Coordinates of Phylogenetic Structure |
pcr | Analyzing Real-Time Quantitative PCR Data |
PCRedux | Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit |
PCS | Calculate the probability of correct selection (PCS) |
pcse | Panel-Corrected Standard Error Estimation in R |
PCSinR | Parallel Constraint Satisfaction Networks in R |
pct | Propensity to Cycle Tool |
pcts | Periodically Correlated and Periodically Integrated Time Series |
pdc | Permutation Distribution Clustering |
pder | Panel Data Econometrics with R |
pdfCluster | Cluster Analysis via Nonparametric Density Estimation |
PDFEstimator | Nonparametric Probability Density Estimator |
pdfetch | Fetch Economic and Financial Time Series Data from Public Sources |
pdfminer | Read Portable Document Format (PDF) Files |
pdfsearch | Search Tools for PDF Files |
pdftables | Programmatic Conversion of PDF Tables |
pdftools | Text Extraction, Rendering and Converting of PDF Documents |
pdist | Partitioned Distance Function |
PDM | Photogrammetric Distances Measurer |
pdmod | Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena |
PDN | Personalized Disease Network |
pdp | Partial Dependence Plots |
PdPDB | Pattern Discovery in PDB Structures of Metalloproteins |
pdqr | Work with Custom Distribution Functions |
PDQutils | PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations |
pdR | Threshold Model and Unit Root Tests in Cross-Section and Time Series Data |
pds3 | Manipulate PDS3 ODL Files |
PDSCE | Positive definite sparse covariance estimators |
PDShiny | 'Probability Distribution Shiny' |
pdSpecEst | An Analysis Toolbox for Hermitian Positive Definite Matrices |
pdynmc | Moment Condition Based Estimation of Linear Dynamic Panel Data Models |
Peacock.test | Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests |
peacots | Periodogram Peaks in Correlated Time Series |
PeakError | Compute the Annotation Error of Peak Calls |
peakPick | Peak Picking Methods Inspired by Biological Data |
peakRAM | Monitor the Total and Peak RAM Used by an Expression or Function |
PeakSegDisk | Disk-Based Constrained Change-Point Detection |
PeakSegDP | Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data |
PeakSegJoint | Joint Peak Detection in Several ChIP-Seq Samples |
PeakSegOptimal | Optimal Segmentation Subject to Up-Down Constraints |
pear | Package for Periodic Autoregression Analysis |
pearson7 | Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2 |
PearsonDS | Pearson Distribution System |
PearsonICA | Independent component analysis using score functions from the Pearson system |
pec | Prediction Error Curves for Risk Prediction Models in Survival Analysis |
PedCNV | An implementation for association analysis with CNV data |
pedgene | Gene-Level Statistics for Pedigree Data |
pedigree | Pedigree functions |
pedigreemm | Pedigree-based mixed-effects models |
pedigreeTools | Versatile Functions for Working with Pedigrees |
pedmut | Mutation Models for Pedigree Likelihood Computations |
pedometrics | Miscellaneous Pedometric Tools |
pedprobr | Probability Computations on Pedigrees |
pedquant | Public Economic Data and Quantitative Analysis |
pedSimulate | Pedigree, Genetic Merit and Phenotype Simulation |
pedtools | Creating and Working with Pedigrees and Marker Data |
PeerPerformance | Luck-Corrected Peer Performance Analysis in R |
pegas | Population and Evolutionary Genetics Analysis System |
PEGroupTesting | Population Proportion Estimation using Group Testing |
PEIP | Geophysical Inverse Theory and Optimization |
PELVIS | Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae |
PEMM | A Penalized EM algorithm incorporating missing-data mechanism |
pems.utils | Portable Emissions (and Other Mobile) Measurement System Utilities |
penalized | L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
penalizedLDA | Penalized Classification using Fisher's Linear Discriminant |
penalizedSVM | Feature Selection SVM using Penalty Functions |
penaltyLearning | Penalty Learning |
pencopulaCond | Estimating Non-Simplified Vine Copulas Using Penalized Splines |
PenCoxFrail | Regularization in Cox Frailty Models |
pendensity | Density Estimation with a Penalized Mixture Approach |
penDvine | Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines |
PenIC | Semiparametric Regression Analysis of Interval-Censored Data using Penalized Splines |
penMSM | Estimating Regularized Multi-state Models Using L1 Penalties |
penPHcure | Variable Selection in PH Cure Model with Time-Varying Covariates |
pense | Penalized Elastic Net S/MM-Estimator of Regression |
pensim | Simulation of High-Dimensional Data and Parallelized Repeated Penalized Regression |
peperr | Parallelised Estimation of Prediction Error |
peppm | Piecewise Exponential Distribution with Random Time Grids |
pepr | Reading Portable Encapsulated Projects |
PepSAVIms | PepSAVI-MS Data Analysis |
peptider | Evaluation of Diversity in Nucleotide Libraries |
Peptides | Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
pequod | Moderated Regression Package |
perARMA | Periodic Time Series Analysis |
Perc | Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network |
perccal | Implementing Double Bootstrap Linear Regression Confidence Intervals Using the 'perc-cal' Method |
perccalc | Estimate Percentiles from an Ordered Categorical Variable |
perfectphyloR | Reconstruct Perfect Phylogenies from DNA Sequence Data |
PerFit | Person Fit |
PerfMeas | PerfMeas: Performance Measures for ranking and classification tasks |
performance | Assessment of Regression Models Performance |
PerformanceAnalytics | Econometric Tools for Performance and Risk Analysis |
performanceEstimation | An Infra-Structure for Performance Estimation of Predictive Models |
pergola | Toolbox for Polyploid Genetic Data |
peRiodiCS | Functions for Generating Periodic Curves |
PeriodicTable | Periodic Table of the Elements |
periscope | Enterprise Streamlined 'Shiny' Application Framework |
perm | Exact or Asymptotic permutation tests |
PermAlgo | Permutational Algorithm to Simulate Survival Data |
PerMallows | Permutations and Mallows Distributions |
permGPU | Using GPUs in Statistical Genomics |
permGS | Permutational Group Sequential Test for Time-to-Event Data |
permimp | Conditional Permutation Importance |
permPATH | Permutation Based Gene Expression Pathway Analysis |
permubiome | A Permutation Based Test for Biomarker Discovery in Microbiome Data |
permuco | Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals |
permutations | The Symmetric Group: Permutations of a Finite Set |
permute | Functions for Generating Restricted Permutations of Data |
permutes | Permutation Tests for Time Series Data |
perry | Resampling-based prediction error estimation for regression models |
PerseusR | Perseus R Interop |
persiandictionary | English to Persian dictionary |
PersianStemmer | Persian Stemmer for Text Analysis |
PersomicsArray | Automated Persomics Array Image Extraction |
personalized | Estimation and Validation Methods for Subgroup Identification and Personalized Medicine |
personograph | Pictographic Representation of Treatment Effects |
personr | Test Your Personality |
perspectev | Permutation of Species During Turnover Events |
peRspective | Interface to the 'Perspective' API |
perturb | Tools for Evaluating Collinearity |
perturbR | Random Perturbation of Count Matrices |
pesel | Automatic Estimation of Number of Principal Components in PCA |
PetfindeR | 'Petfinder' API Wrapper |
petitr | Relative Growth Rate |
petrinetR | Building, Visualizing, Exporting and Replaying Petri Nets |
petro.One | Statistics and Text Mining for Oil and Gas Papers from OnePetro Metadata |
pewdata | Reproducible Retrieval of Pew Research Center Datasets |
pexm | Loading a JAGS Module for the Piecewise Exponential Distribution |
pez | Phylogenetics for the Environmental Sciences |
pfa | Estimates False Discovery Proportion Under Arbitrary Covariance Dependence |
pgam | Poisson-Gamma Additive Models |
pgdraw | Generate Random Samples from the Polya-Gamma Distribution |
PGEE | Penalized Generalized Estimating Equations in High-Dimension |
pgee.mixed | Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes |
pgirmess | Spatial Analysis and Data Mining for Field Ecologists |
pglm | Panel Generalized Linear Models |
pGLS | Generalized Least Square in comparative Phylogenetics |
PGM2 | Nested Resolvable Designs and their Associated Uniform Designs |
pGMGM | Estimating Multiple Gaussian Graphical Models (GGM) in Penalized Gaussian Mixture Models (GMM) |
pgmm | Parsimonious Gaussian Mixture Models |
pgnorm | The p-Generalized Normal Distribution |
pGPx | Pseudo-Realizations for Gaussian Process Excursions |
pgraph | Build Dependency Graphs using Projection |
PGRdup | Discover Probable Duplicates in Plant Genetic Resources Collections |
pgsc | Computes Powell's Generalized Synthetic Control Estimator |
ph2bayes | Bayesian Single-Arm Phase II Designs |
ph2bye | Phase II Clinical Trial Design Using Bayesian Methods |
ph2mult | Phase II Clinical Trial Design for Multinomial Endpoints |
phangorn | Phylogenetic Reconstruction and Analysis |
pharmaRTF | Enhanced RTF Wrapper for Use with Existing Table Packages |
PharmPow | Pharmacometric Power calculations for mixed study designs |
Phase123 | Simulating and Conducting Phase 123 Trials |
Phase12Compare | Simulates SPSO and Efftox Phase 12 Trials with Correlated Outcomes |
phase1PRMD | Personalized Repeated Measurement Design for Phase I Clinical Trials |
phase1RMD | Repeated Measurement Design for Phase I Clinical Trial |
phaseR | Phase Plane Analysis of One- And Two-Dimensional Autonomous ODE Systems |
phateR | PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
phd | Permutation Testing in High-Dimensional Linear Models |
pheatmap | Pretty Heatmaps |
PHEindicatormethods | Common Public Health Statistics and their Confidence Intervals |
phenability | Nonparametric Stability Analysis |
phenesse | Estimate Phenological Metrics using Presence-Only Data |
phenex | Auxiliary Functions for Phenological Data Analysis |
PHENIX | Phenotypic Integration Index |
phenmod | Auxiliary functions for phenological data processing, modelling and result handling |
phenModel | Insect Phenology Model Evaluation Based on Daily Temperatures |
pheno | Auxiliary functions for phenological data analysis |
phenocamapi | Interacting with the PhenoCam Data and API |
phenocamr | Facilitates 'PhenoCam' Data Access and Time Series Post-Processing |
phenoCDM | Continuous Development Models for Incremental Time-Series Analysis |
phenofit | Extract Remote Sensing Vegetation Phenology |
phenology | Tools to Manage a Parametric Function that Describes Phenology |
phenomap | Projecting Satellite-Derived Phenology in Space |
phenopix | Process Digital Images of a Vegetation Cover |
Phenotype | A Tool for Phenotypic Data Processing |
PhenotypeSimulator | Flexible Phenotype Simulation from Different Genetic and Noise Models |
PHeval | Evaluation of the Proportional Hazards Assumption with a Standardized Score Process |
phia | Post-Hoc Interaction Analysis |
phiDelta | Tool for Phi Delta Analysis of Features |
philentropy | Similarity and Distance Quantification Between Probability Functions |
PHInfiniteEstimates | Tools for Inference in the Presence of a Monotone Likelihood |
phm | Phrase Mining |
phonenumber | Convert Letters to Numbers and Back as on a Telephone Keypad |
phonfieldwork | Linguistic Phonetic Fieldwork Tools |
phonics | Phonetic Spelling Algorithms |
phonR | Tools for Phoneticians and Phonologists |
phonTools | Tools for Phonetic and Acoustic Analyses |
photobiology | Photobiological Calculations |
photobiologyFilters | Spectral Transmittance Data for Filters |
photobiologyInOut | Read Spectral and Logged Data from Foreign Files |
photobiologyLamps | Spectral Irradiance Data for Lamps |
photobiologyLEDs | Spectral Data for Light-Emitting-Diodes |
photobiologyPlants | Plant Photobiology Related Functions and Data |
photobiologySensors | Spectral Response Data for Light Sensors |
photobiologySun | Data for Sunlight Spectra |
photobiologyWavebands | Waveband Definitions for UV, VIS, and IR Radiation |
photosynthesis | Model C3 Photosynthesis |
phreeqc | R Interface to Geochemical Modeling Software |
phuassess | Proportional Habitat Use Assessment |
phuse | Web Application Framework for 'PhUSE' Scripts |
PhViD | PharmacoVigilance Signal Detection |
Phxnlme | Run Phoenix NLME and Perform Post-Processing |
phybreak | Analysis of Outbreaks with Sequence Data |
phyclust | Phylogenetic Clustering (Phyloclustering) |
phyext2 | An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase' |
PhyInformR | Rapid Calculation of Phylogenetic Information Content |
phylin | Spatial Interpolation of Genetic Data |
phylobase | Base Package for Phylogenetic Structures and Comparative Data |
phylocanvas | Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library |
phyloclim | Integrating Phylogenetics and Climatic Niche Modeling |
phylocomr | Interface to 'Phylocom' |
PhylogeneticEM | Automatic Shift Detection using a Phylogenetic EM |
PHYLOGR | Functions for Phylogenetically Based Statistical Analyses |
phylogram | Dendrograms for Evolutionary Analysis |
phyloland | Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework |
phylolm | Phylogenetic Linear Regression |
PhyloMeasures | Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures |
phylometrics | Estimating Statistical Errors of Phylogenetic Metrics |
phylopath | Perform Phylogenetic Path Analysis |
phyloregion | Biogeographic Regionalization and Macroecology |
phyloseqGraphTest | Graph-Based Permutation Tests for Microbiome Data |
phylosignal | Exploring the Phylogenetic Signal in Continuous Traits |
phylotate | Phylogenies with Annotations |
phylotools | Phylogenetic Tools for Eco-Phylogenetics |
phyloTop | Calculating Topological Properties of Phylogenies |
phyr | Model Based Phylogenetic Analysis |
phyreg | The Phylogenetic Regression of Grafen (1989) |
PhysActBedRest | Marks Periods of 'Bedrest' in Actigraph Accelerometer Data |
PhysicalActivity | Process Accelerometer Data for Physical Activity Measurement |
physiology | Calculate physiologic characteristics of awake and anesthetized adults, children and infants |
PhySortR | A Fast, Flexible Tool for Sorting Phylogenetic Trees |
phytools | Phylogenetic Tools for Comparative Biology (and Other Things) |
phytotools | Phytoplankton Production Tools |
picante | Integrating Phylogenies and Ecology |
picasso | Pathwise Calibrated Sparse Shooting Algorithm |
pid | Process Improvement using Data |
PieceExpIntensity | Bayesian Model to Find Changepoints Based on Rates and Count Data |
piecepackr | Board Game Graphics |
piecewiseSEM | Piecewise Structural Equation Modeling |
piggyback | Managing Larger Data on a GitHub Repository |
PIGShift | Polygenic Inverse Gamma Shifts |
Pijavski | Global Univariate Minimization |
pillar | Coloured Formatting for Columns |
pim | Fit Probabilistic Index Models |
pimeta | Prediction Intervals for Random-Effects Meta-Analysis |
pinbasic | Fast and Stable Estimation of the Probability of Informed Trading (PIN) |
pinfsc50 | Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
pingers | Identify, Ping, and Log Internet Provider Connection Data |
pingr | Check if a Remote Computer is Up |
pinnacle.API | A Wrapper for the Pinnacle API |
pinnacle.data | Market Odds Data from Pinnacle |
pinochet | Data About the Victims of the Pinochet Regime, 1973-1990 |
pinp | 'pinp' is not 'PNAS' |
pins | Pin, Discover and Share Resources |
PINSPlus | Clustering Algorithm for Data Integration and Disease Subtyping |
pinyin | Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other Codes |
pipe.design | Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design |
pipefittr | Convert Nested Functions to Pipes |
pipeGS | Permutation p-Value Estimation for Gene Set Tests |
pipeliner | Machine Learning Pipelines for R |
pipeR | Multi-Paradigm Pipeline Implementation |
PIPS | Predicted Interval Plots |
pirate | Generated Effect Modifier |
piratings | Calculate Pi Ratings for Teams Competing in Sport Matches |
piRF | Prediction Intervals for Random Forests |
pisaRT | Small Example Response and Response Time Data from PISA 2015 |
pitchRx | Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing 'pitchfx' |
piton | Parsing Expression Grammars in Rcpp |
pivmet | Pivotal Methods for Bayesian Relabelling and k-Means Clustering |
PivotalR | A Fast, Easy-to-Use Tool for Manipulating Tables in Databases and a Wrapper of MADlib |
pivotaltrackR | A Client for the 'Pivotal Tracker' API |
pivottabler | Create Pivot Tables |
pixels | Tools for Working with Image Pixels |
pixiedust | Tables so Beautifully Fine-Tuned You Will Believe It's Magic |
pixmap | Bitmap Images (“Pixel Maps”) |
PK | Basic Non-Compartmental Pharmacokinetics |
PKconverter | The Parameter Converter of the Pharmacokinetic Models |
pkgbuild | Find Tools Needed to Build R Packages |
pkgcache | Cache 'CRAN'-Like Metadata and R Packages |
pkgcond | Classed Error and Warning Conditions |
pkgconfig | Private Configuration for 'R' Packages |
pkgdown | Make Static HTML Documentation for a Package |
pkgfilecache | Download and Manage Optional Package Data |
pkggraph | A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories |
pkgKitten | Create Simple Packages Which Do not Upset R Package Checks |
pkgload | Simulate Package Installation and Attach |
pkgmaker | Development Utilities for R Packages |
pkgndep | Check the Heaviness of Package Dependencies |
pkgnet | Get Network Representation of an R Package |
pkgsearch | Search and Query CRAN R Packages |
pkgverse | Build a Meta-Package Universe |
PKI | Public Key Infrastucture for R Based on the X.509 Standard |
pkmon | Least-Squares Estimator under k-Monotony Constraint for Discrete Functions |
PKNCA | Perform Pharmacokinetic Non-Compartmental Analysis |
PKPDmodels | Pharmacokinetic/pharmacodynamic models |
pkr | Pharmacokinetics in R |
PKreport | A reporting pipeline for checking population pharmacokinetic model assumption |
pks | Probabilistic Knowledge Structures |
pKSEA | Prediction-Based Kinase-Substrate Enrichment Analysis |
pksensi | Global Sensitivity Analysis in Physiologically Based Kinetic Modeling |
plac | A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data |
placer | PLastic ACcumulation Estimate using R (PLACER) |
PlackettLuce | Plackett-Luce Models for Rankings |
plainview | Plot Raster Images Interactively on a Plain HTML Canvas |
plan | Tools for Project Planning |
planar | Multilayer Optics |
PlaneGeometry | Plane Geometry |
Planesmuestra | Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD 414 Acceptance Sampling Plan |
planets | Simple and Accessible Data from all Known Planets |
planor | Generation of Regular Factorial Designs |
plantecophys | Modelling and Analysis of Leaf Gas Exchange Data |
plantecowrap | Enhancing Capabilities of 'plantecophys' |
plaqr | Partially Linear Additive Quantile Regression |
PlasmaMutationDetector | Tumor Mutation Detection in Plasma |
Plasmidprofiler | Visualization of Plasmid Profile Results |
Plasmode | 'Plasmode' Simulation |
plater | Read, Tidy, and Display Data from Microtiter Plates |
platetools | Tools and Plots for Multi-Well Plates |
PlayerRatings | Dynamic Updating Methods for Player Ratings Estimation |
plde | Penalized Log-Density Estimation Using Legendre Polynomials |
pleiades | Interface to the 'Pleiades' 'Archeological' Database |
pleio | Pleiotropy Test for Multiple Traits on a Genetic Marker |
plethem | Population Life Course Exposure to Health Effects Modeling |
plfm | Probabilistic Latent Feature Analysis |
plgp | Particle Learning of Gaussian Processes |
plink | IRT Separate Calibration Linking Methods |
plinkFile | 'PLINK' (and 'GCTA') File Helpers |
plinkQC | Genotype Quality Control with 'PLINK' |
PLIS | Multiplicity control using Pooled LIS statistic |
plm | Linear Models for Panel Data |
PLMIX | Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings |
PLmixed | Estimate (Generalized) Linear Mixed Models with Factor Structures |
plmm | Partially Linear Mixed Effects Model |
pln | Polytomous Logit-Normit (Graded Logistic) Model Estimation |
PLNmodels | Poisson Lognormal Models |
plogr | The 'plog' C++ Logging Library |
PLordprob | Multivariate Ordered Probit Model via Pairwise Likelihood |
plot.matrix | Visualizes a Matrix as Heatmap |
plot3D | Plotting Multi-Dimensional Data |
plot3Drgl | Plotting Multi-Dimensional Data - Using 'rgl' |
plot3logit | Ternary Plots for Trinomial Regression Models |
PlotContour | Plot Contour Line |
plotdap | Easily Visualize Data from 'ERDDAP' Servers via the 'rerddap' Package |
plotfunctions | Various Functions to Facilitate Visualization of Data and Analysis |
plotGMM | Tools for Visualizing Gaussian Mixture Models |
plothelper | New Plots Based on 'ggplot2' and Functions to Create Regular Shapes |
plotKML | Visualization of Spatial and Spatio-Temporal Objects in Google Earth |
plotluck | 'ggplot2' Version of "I'm Feeling Lucky!" |
plotly | Create Interactive Web Graphics via 'plotly.js' |
plotlyGeoAssets | Render 'Plotly' Maps without an Internet Connection |
plotMCMC | MCMC Diagnostic Plots |
plotMElm | Plot Marginal Effects from Linear Models |
plotmm | Tidy Tools for Visualizing Mixture Models |
plotmo | Plot a Model's Residuals, Response, and Partial Dependence Plots |
plotpc | Plot Principal Component Histograms Around a Scatter Plot |
PlotPrjNetworks | Useful Networking Tools for Project Management |
plotprotein | Development of Visualization Tools for Protein Sequence |
PlotRegionHighlighter | Creates an envelope that surrounds a set of points plotted in a two dimensional space |
plotrix | Various Plotting Functions |
plotROC | Generate Useful ROC Curve Charts for Print and Interactive Use |
plotrr | Making Visual Exploratory Data Analysis with Nested Data Easier |
plotscale | Scale Graphics Devices Using Plot Dimensions |
plotSEMM | Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models |
plotwidgets | Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots |
plpoisson | Prediction Limits for Poisson Distribution |
plRasch | Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation |
PLRModels | Statistical inference in partial linear regression models |
pls | Partial Least Squares and Principal Component Regression |
PLSbiplot1 | The Partial Least Squares (PLS) Biplot |
plsdepot | Partial Least Squares (PLS) Data Analysis Methods |
plsdof | Degrees of Freedom and Statistical Inference for Partial Least Squares Regression |
plsgenomics | PLS Analyses for Genomics |
plsmod | Model Wrappers for Projection Methods |
plsmselect | Linear and Smooth Predictor Modelling with Penalisation and Variable Selection |
plsr | Pleasure - Partial Least Squares Analysis with Permutation Testing |
plsRbeta | Partial Least Squares Regression for Beta Regression Models |
plsRcox | Partial Least Squares Regression for Cox Models and Related Techniques |
plsRglm | Partial Least Squares Regression for Generalized Linear Models |
plsVarSel | Variable Selection in Partial Least Squares |
pltesim | Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence |
plu | Pluralize Phrases |
plugdensity | Plug-in Kernel Density Estimation |
plumber | An API Generator for R |
plumbr | Mutable and dynamic data models |
pluralize | Pluralize and 'Singularize' Any (English) Word |
plus | Penalized Linear Unbiased Selection |
pluscode | Encoder for Google 'Pluscodes' |
plusser | A Google+ Interface for R |
plyr | Tools for Splitting, Applying and Combining Data |
pm4py | Interface to the 'PM4py' Process Mining Library |
PMA | Penalized Multivariate Analysis |
pmc | Phylogenetic Monte Carlo |
pmcgd | pmcgd |
PMCMR | Calculate Pairwise Multiple Comparisons of Mean Rank Sums |
PMCMRplus | Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended |
pmd | Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis |
pmdplyr | 'dplyr' Extension for Common Panel Data Maneuvers |
pmhtutorial | Minimal Working Examples for Particle Metropolis-Hastings |
pMineR | Processes Mining in Medicine |
PML | Penalized Multi-Band Learning for Circadian Rhythm Analysis Using Actigraphy |
pmml | Generate PMML for Various Models |
pmmlTransformations | Transforms Input Data from a PMML Perspective |
pmpp | Posterior Mean Panel Predictor |
pmr | Probability Models for Ranking Data |
pmsampsize | Calculates the Minimum Sample Size Required for Developing a Multivariable Prediction Model |
pmultinom | One-Sided Multinomial Probabilities |
PMwR | Portfolio Management with R |
pmxTools | Pharmacometric and Pharmacokinetic Toolkit |
PNADcIBGE | Downloading, Reading and Analysing PNADC Microdata |
png | Read and write PNG images |
pnmtrem | Probit-Normal Marginalized Transition Random Effects Models |
pnn | Probabilistic neural networks |
PNWColors | Color Palettes Inspired by Nature in the US Pacific Northwest |
PoA | Finds the Price of Anarchy for Routing Games |
POCRE | Penalized Orthogonal-Components Regression |
pocrm | Dose Finding in Drug Combination Phase I Trials Using PO-CRM |
POD | Probability of Detection for Qualitative PCR Methods |
POET | Principal Orthogonal ComplEment Thresholding (POET) Method |
pogit | Bayesian Variable Selection for a Poisson-Logistic Model |
PogromcyDanych | PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People |
poibin | The Poisson Binomial Distribution |
PoiClaClu | Classification and Clustering of Sequencing Data Based on a Poisson Model |
poilog | Poisson lognormal and bivariate Poisson lognormal distribution |
POINT | Protein Structure Guided Local Test |
pointblank | Validation of Local and Remote Data Tables |
pointdensityP | Point Density for Geospatial Data |
PointFore | Interpretation of Point Forecasts as State-Dependent Quantiles and Expectiles |
pointr | Working Comfortably with Pointers and Shortcuts to R Objects |
pointRes | Analyzing Pointer Years and Components of Resilience |
poio | Input/Output Functionality for "PO" and "POT" Message Translation Files |
PoisBinNonNor | Data Generation with Poisson, Binary and Continuous Components |
poisbinom | A Faster Implementation of the Poisson-Binomial Distribution |
PoisBinOrd | Data Generation with Poisson, Binary and Ordinal Components |
PoisBinOrdNonNor | Generation of Up to Four Different Types of Variables |
PoisBinOrdNor | Data Generation with Poisson, Binary, Ordinal and Normal Components |
poisDoubleSamp | Confidence Intervals with Poisson Double Sampling |
poisFErobust | Poisson Fixed Effects Robust |
poismf | Factorization of Sparse Counts Matrices Through Poisson Likelihood |
PoisNonNor | Simultaneous Generation of Count and Continuous Data |
PoisNor | Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals |
poisson | Simulating Homogenous & Non-Homogenous Poisson Processes |
poisson.glm.mix | Fit high dimensional mixtures of Poisson GLMs |
PoissonBinomial | Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions |
poissonMT | Robust M-Estimators Based on Transformations for Poisson Model |
PoissonPCA | Poisson-Noise Corrected PCA |
poissonreg | Model Wrappers for Poisson Regression |
PoissonSeq | Significance analysis of sequencing data based on a Poisson log linear model |
poistweedie | Poisson-Tweedie exponential family models |
poker | Play Texas Hold Em Poker |
polAr | Argentina Political Analysis |
polaroid | Create Hex Stickers with 'shiny' |
poLCA | Polytomous variable Latent Class Analysis |
policytree | Policy Learning via Doubly Robust Empirical Welfare Maximization over Trees |
poliscidata | Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition |
polished | Authentication and Administration for 'shiny' Apps |
polite | Be Nice on the Web |
politeness | Detecting Politeness Features in Text |
politicaldata | Tools for Acquiring and Analyzing Political Data |
pollen | Analysis of Aerobiological Data |
pollimetry | Estimate Pollinator Body Size and Co-Varying Ecological Traits |
pollster | Calculate Crosstab and Topline Tables of Weighted Survey Data |
pollstR | Client for the HuffPost Pollster API |
polmineR | Verbs and Nouns for Corpus Analysis |
polspline | Polynomial Spline Routines |
polyaAeppli | Implementation of the Polya-Aeppli distribution |
polyapost | Simulating from the Polya Posterior |
Polychrome | Qualitative Palettes with Many Colors |
polyclip | Polygon Clipping |
polycor | Polychoric and Polyserial Correlations |
polyCub | Cubature over Polygonal Domains |
polyfreqs | Bayesian Population Genomics in Autopolyploids |
polyglot | Learn Foreign Language Vocabulary |
polylabelr | Find the Pole of Inaccessibility (Visual Center) of a Polygon |
polymapR | Linkage Analysis in Outcrossing Polyploids |
polyMatrix | Infrastructure for Manipulation Polynomial Matrices |
polynom | A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations |
PolynomF | Polynomials in R |
PolyPatEx | Paternity Exclusion in Autopolyploid Species |
polyPK | The Pharmacokinetics (PK) of Multi-Component Drugs Using a Metabolomics Approach |
polypoly | Helper Functions for Orthogonal Polynomials |
polyRAD | Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids |
polyreg | Polynomial Regression |
polysat | Tools for Polyploid Microsatellite Analysis |
polySegratio | Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids |
polySegratioMM | Bayesian Mixture Models for Marker Dosage in Autopolyploids |
PolyTrend | Trend Classification Algorithm |
polywog | Bootstrapped Basis Regression with Oracle Model Selection |
pom | POM - Patch Occupancy Models |
POMaSPU | Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU) |
pomdp | Solver for Partially Observable Markov Decision Processes (POMDP) |
Pomic | Pattern Oriented Modelling Information Criterion |
pomp | Statistical Inference for Partially Observed Markov Processes |
pompom | Person-Oriented Method and Perturbation on the Model |
pooh | Partial Orders and Relations |
pool | Object Pooling |
PooledMeanGroup | Pooled Mean Group Estimation of Dynamic Heterogenous Panels |
poolfstat | Computing F-Statistics from Pool-Seq Data |
pooling | Fit Poolwise Regression Models |
poolr | Methods for Pooling P-Values from (Dependent) Tests |
poolVIM | Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance |
poorman | A Poor Man's Base R Copy of 'dplyr' Verbs |
pop | A Flexible Syntax for Population Dynamic Modelling |
popbio | Construction and Analysis of Matrix Population Models |
popdemo | Demographic Modelling Using Projection Matrices |
POPdemog | Plot Population Demographic History |
PopED | Population (and Individual) Optimal Experimental Design |
popEpi | Functions for Epidemiological Analysis using Population Data |
PopGenKit | Useful functions for (batch) file conversion and data resampling in microsatellite datasets |
PopGenome | An Efficient Swiss Army Knife for Population Genomic Analyses |
popgenr | Accompaniment to the Book Population Genetics with R: An Introduction for Life Scientists |
PopGenReport | A Simple Framework to Analyse Population and Landscape Genetic Data |
popkin | Estimate Kinship and FST under Arbitrary Population Structure |
popKorn | For interval estimation of mean of selected populations |
poplite | Tools for Simplifying the Population and Querying of SQLite Databases |
poppr | Genetic Analysis of Populations with Mixed Reproduction |
popprxl | Read GenAlEx Files Directly from Excel |
popReconstruct | Reconstruct Human Populations of the Recent Past |
popsom | Functions for Constructing and Evaluating Self-Organizing Maps |
poptrend | Estimate Smooth and Linear Trends from Population Count Survey Data |
populationPDXdesign | Designing Population PDX Studies |
PopVar | Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation |
porridge | Ridge-Type Penalized Estimation of a Potpourri of Models |
PortalHacienda | Acceder Con R a Los Datos Del Portal De Hacienda |
portfolio.optimization | Contemporary Portfolio Optimization |
PortfolioAnalysis | Portfolio Optimization Methods |
PortfolioAnalytics | Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios |
portfolioBacktest | Automated Backtesting of Portfolios over Multiple Datasets |
PortfolioEffectEstim | High Frequency Price Estimators by PortfolioEffect |
PortfolioEffectHFT | High Frequency Portfolio Analytics by PortfolioEffect |
PortfolioOptim | Small/Large Sample Portfolio Optimization |
PortRisk | Portfolio Risk Analysis |
portsort | Factor-Based Portfolio Sorts |
PoSI | Valid Post-Selection Inference for Linear LS Regression |
PostcodesioR | API Wrapper Around 'Postcodes.io' |
postDoubleR | Post Double Selection with Double Machine Learning |
posterdown | Generate PDF Conference Posters Using R Markdown |
PosteriorBootstrap | Non-Parametric Sampling with Parallel Monte Carlo |
postGIStools | Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases |
postHoc | Tools for Post-Hoc Analysis |
postinfectious | Estimating the Incubation Period Distribution of Post-Infectious Syndrome |
postlightmercury | Parses Web Pages using Postlight Mercury |
postlogic | Infix and Postfix Logic Operators |
POT | Generalized Pareto Distribution and Peaks Over Threshold |
potts | Markov Chain Monte Carlo for Potts Models |
PottsUtils | Utility Functions of the Potts Models |
pould | Phased or Unphased Linkage Disequilibrium |
POUMM | The Phylogenetic Ornstein-Uhlenbeck Mixed Model |
povcalnetR | Client for the 'Povcalnet' API |
powdist | Power and Reversal Power Distributions |
powdR | Full Pattern Summation of X-Ray Powder Diffraction Data |
PoweR | Computation of Power and Level Tables for Hypothesis Tests |
Power2Stage | Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies |
powerAnalysis | Power Analysis in Experimental Design |
powerbydesign | Power Estimates for ANOVA Designs |
powerCompRisk | Power Analysis Tool for Joint Testing Hazards with Competing Risks Data |
powerEQTL | Power and Sample Size Calculation for eQTL Analysis |
powerGWASinteraction | Power Calculations for GxE and GxG Interactions for GWAS |
poweRlaw | Analysis of Heavy Tailed Distributions |
powerlmm | Power Analysis for Longitudinal Multilevel Models |
powerMediation | Power/Sample Size Calculation for Mediation Analysis |
PowerNormal | Power Normal Distribution |
powerpkg | Power analyses for the affected sib pair and the TDT design |
powerplus | Exponentiation Operations |
powerSurvEpi | Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies |
PowerTOST | Power and Sample Size for (Bio)Equivalence Studies |
PowerUpR | Power Analysis Tools for Multilevel Randomized Experiments |
PP | Person Parameter Estimation |
PP3 | Three-Dimensional Exploratory Projection Pursuit |
ppcc | Probability Plot Correlation Coefficient Test |
PPCI | Projection Pursuit for Cluster Identification |
ppclust | Probabilistic and Possibilistic Cluster Analysis |
ppcong | Interfacing with ProPublica's 'Congress' API |
ppcor | Partial and Semi-Partial (Part) Correlation |
ppcSpatial | Spatial Analysis of Pakistan Population Census |
PPforest | Projection Pursuit Classification Forest |
ppgam | Generalised Additive Point Process Models |
ppgmmga | Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms |
ppitables | Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI) |
ppmHR | Privacy-Protecting Hazard Ratio Estimation in Distributed Data Networks |
ppmlasso | Point Process Models with LASSO Penalties |
PPMR | Probabilistic Two Sample Mendelian Randomization |
PPQplan | Process Performance Qualification (PPQ) Plans in Chemistry, Manufacturing and Controls (CMC) Statistical Analysis |
PPRL | Privacy Preserving Record Linkage |
pps | Functions for PPS sampling |
ppsbm | Clustering in Longitudinal Networks |
PPtree | Projection pursuit classification tree |
PPtreeViz | Projection Pursuit Classification Tree Visualization |
pqantimalarials | web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa |
PQLseq | Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies |
prabclus | Functions for Clustering and Testing of Presence-Absence, Abundance and Multilocus Genetic Data |
pracma | Practical Numerical Math Functions |
PracTools | Tools for Designing and Weighting Survey Samples |
pragma | Provides a pragma / directive / keyword syntax for R |
prais | Prais-Winsten Estimator for AR(1) Serial Correlation |
praise | Praise Users |
praktikum | Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu |
praznik | Tools for Information-Based Feature Selection |
prc | Paired Response Curve |
prcbench | Testing Workbench for Precision-Recall Curves |
prclust | Penalized Regression-Based Clustering Method |
prcr | Person-Centered Analysis |
pre | Prediction Rule Ensembles |
precautionary | Safety Diagnostics for Dose-Escalation Trial Designs |
precintcon | Precipitation Intensity, Concentration and Anomaly Analysis |
precisely | Estimate Sample Size Based on Precision Rather than Power |
PreciseSums | Accurate Floating Point Sums and Products |
precommit | Pre-Commit Hooks |
precrec | Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves |
PredCRG | Computational Prediction of Proteins Encoded by Circadian Genes |
predhy | Genomic Prediction of Hybrid Performance |
predict3d | Draw Three Dimensional Predict Plot Using Package 'rgl' |
PredictABEL | Assessment of Risk Prediction Models |
prediction | Tidy, Type-Safe 'prediction()' Methods |
predictionInterval | Prediction Interval Functions for Assessing Replication Study Results |
PredictionR | Prediction for Future Data from any Continuous Distribution |
PredictiveRegression | Prediction Intervals for Three Basic Statistical Models |
predictmeans | Calculate Predicted Means for Linear Models |
predictoR | Predictive Data Analysis System |
predictrace | Predict the Race of a Given Surname Using Census Data |
predkmeans | Covariate Adaptive Clustering |
predmixcor | Classification rule based on Bayesian mixture models with feature selection bias corrected |
PredPsych | Predictive Approaches in Psychology |
predReliability | Estimates Reliability of Individual Supervised Learning Predictions |
predtoolsTS | Time Series Prediction Tools |
prefeR | R Package for Pairwise Preference Elicitation |
preference | 2-Stage Preference Trial Design and Analysis |
prefmod | Utilities to Fit Paired Comparison Models for Preferences |
PreKnitPostHTMLRender | Pre-Knitting Processing and Post HTML-Rendering Processing |
PReMiuM | Dirichlet Process Bayesian Clustering, Profile Regression |
prepdat | Preparing Experimental Data for Statistical Analysis |
prepplot | Prepare Figure Region for Base Graphics |
PreProcess | Basic Functions for Pre-Processing Microarrays |
PREPShiny | Interactive Document for Preprocessing the Dataset |
preputils | Utilities for Preparation of Data Analysis |
prereg | R Markdown Templates to Preregister Scientific Studies |
PresenceAbsence | Presence-Absence Model Evaluation |
presens | Interface for PreSens Fiber Optic Data |
presentes | Registry of Victims of State Terrorism in Argentina |
preseqR | Predicting Species Accumulation Curves |
PResiduals | Probability-Scale Residuals and Residual Correlations |
presmTP | Methods for Transition Probabilities |
presser | Lightweight Web Server for Testing |
prettyB | Pretty Base Graphics |
prettycode | Pretty Print R Code in the Terminal |
prettydoc | Creating Pretty Documents from R Markdown |
prettyGraphs | Publication-Quality Graphics |
prettymapr | Scale Bar, North Arrow, and Pretty Margins in R |
prettyR | Pretty Descriptive Stats |
prettyunits | Pretty, Human Readable Formatting of Quantities |
prevalence | Tools for Prevalence Assessment Studies |
prevederer | Wrapper for the 'Prevedere' API |
PrevMap | Geostatistical Modelling of Spatially Referenced Prevalence Data |
prevR | Estimating Regional Trends of a Prevalence from a DHS |
prevtoinc | Prevalence to Incidence Calculations for Point-Prevalence Studies in a Nosocomial Setting |
pRF | Permutation Significance for Random Forests |
priceR | Economics and Pricing Tools |
pricesensitivitymeter | Van Westendorp Price Sensitivity Meter Analysis |
prim | Patient Rule Induction Method (PRIM) |
PRIMAL | Parametric Simplex Method for Sparse Learning |
primefactr | Use Prime Factorization for Computations |
primePCA | Projected Refinement for Imputation of Missing Entries in PCA |
primer | Functions and Data for the Book, A Primer of Ecology with R |
primerTree | Visually Assessing the Specificity and Informativeness of Primer Pairs |
primes | Generate and Test for Prime Numbers |
PRIMME | Eigenvalues and Singular Values and Vectors from Large Matrices |
PRIMsrc | PRIM Survival Regression Classification |
princurve | Fits a Principal Curve in Arbitrary Dimension |
prinsimp | Finding and plotting simple basis vectors for multivariate data |
printr | Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format |
prioGene | Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information |
PriorCD | Prioritizing Cancer Drugs for Interested Cancer |
PriorGen | Generates Prior Distributions for Proportions |
prioritizr | Systematic Conservation Prioritization in R |
prioritizrdata | Conservation Planning Datasets |
prioritylasso | Analyzing Multiple Omics Data with an Offset Approach |
prism | Access Data from the Oregon State Prism Climate Project |
PRISM.forecast | Penalized Regression with Inferred Seasonality Module - Forecasting Unemployment Initial Claims using 'Google Trends' Data |
PRISMA | Protocol Inspection and State Machine Analysis |
prismadiagramR | Creates a Prisma Diagram using 'DiagrammeR' |
PRISMAstatement | Plot Flow Charts According to the "PRISMA" Statement |
prismatic | Color Manipulation Tools |
prisonbrief | Downloads and Parses World Prison Brief Data |
prithulib | Perform Random Experiments |
PrivateLR | Differentially Private Regularized Logistic Regression |
prLogistic | Estimation of Prevalence Ratios using Logistic Models |
prnsamplr | Permanent Random Number Sampling |
pro | Point-Process Response Model for Optogenetics |
prob | Elementary Probability on Finite Sample Spaces |
probably | Tools for Post-Processing Class Probability Estimates |
ProbBayes | Probability and Bayesian Modeling |
ProbeDeveloper | Develop Hybridization Probes |
probemod | Statistical Tools for Probing Moderation Effects |
probFDA | Probabilistic Fisher Discriminant Analysis |
ProbForecastGOP | Probabilistic weather forecast using the GOP method |
probhat | Multivariate Generalized Kernel Smoothing and Related Statistical Methods |
ProbMarg | Computing Logit & Probit Predicted Probabilities & Marginal Effects |
probout | Unsupervised Multivariate Outlier Probabilities for Large Datasets |
PROBShiny | Interactive Document for Working with Basic Probability |
ProbYX | Inference for the Stress-Strength Model R = P(Y<X) |
pROC | Display and Analyze ROC Curves |
proccalibrad | Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT |
ProcData | Process Data Analysis |
processanimateR | Process Map Token Replay Animation |
processcheckR | Rule-Based Conformance Checking of Business Process Event Data |
processmapR | Construct Process Maps Using Event Data |
processmonitR | Building Process Monitoring Dashboards |
processR | Implementation of the 'PROCESS' Macro |
processx | Execute and Control System Processes |
ProcMod | Informative Procrustean Matrix Correlation |
ProDenICA | Product Density Estimation for ICA using tilted Gaussian density estimates |
prodest | Production Function Estimation |
prodigenr | Research Project Directory Generator |
prodlim | Product-Limit Estimation for Censored Event History Analysis |
productivity | Indices of Productivity Using Data Envelopment Analysis (DEA) |
productplots | Product Plots for R |
prof.tree | An Alternative Display Profiling Data as Tree Structure |
ProfessR | Grades Setting and Exam Maker |
profExtrema | Compute and Visualize Profile Extrema Functions |
proffer | Profile R Code and Visualize with 'Pprof' |
profile | Read, Manipulate, and Write Profiler Data |
ProfileLikelihood | Profile Likelihood for a Parameter in Commonly Used Statistical Models |
profileModel | Profiling Inference Functions for Various Model Classes |
profileR | Profile Analysis of Multivariate Data in R |
ProFit | Fit Projected 2D Profiles to Galaxy Images |
profmem | Simple Memory Profiling for R |
ProFound | Photometry Tools |
ProfoundData | Downloading and Exploring Data from the PROFOUND Database |
profr | An Alternative Display for Profiling Information |
proftools | Profile Output Processing Tools for R |
profvis | Interactive Visualizations for Profiling R Code |
progenyClust | Finding the Optimal Cluster Number Using Progeny Clustering |
prognosticROC | Prognostic ROC curves for evaluating the predictive capacity of a binary test |
progress | Terminal Progress Bars |
progressr | A Inclusive, Unifying API for Progress Updates |
PROJ | Generic Coordinate System Transformations Using 'PROJ' |
proj4 | A simple interface to the PROJ.4 cartographic projections library |
ProjectionBasedClustering | Projection Based Clustering |
projections | Project Future Case Incidence |
ProjectManagement | Management of Deterministic and Stochastic Projects |
projects | A Project Infrastructure for Researchers |
ProjectTemplate | Automates the Creation of New Statistical Analysis Projects |
projmgr | Task Tracking and Project Management with GitHub |
projpred | Projection Predictive Feature Selection |
ProliferativeIndex | Calculates and Analyzes the Proliferative Index |
PROMETHEE | Preference Ranking Organization METHod for Enrichment of Evaluations |
promises | Abstractions for Promise-Based Asynchronous Programming |
promote | Client for the 'Alteryx Promote' API |
promotionImpact | Analysis & Measurement of Promotion Effectiveness |
prop.comb.RR | Analyzing Combination of Proportions and Relative Risk |
propagate | Propagation of Uncertainty |
PropCIs | Various Confidence Interval Methods for Proportions |
PropClust | Propensity Clustering and Decomposition |
properties | Parse 'Java' Properties Files for 'R Service Bus' Applications |
prophet | Automatic Forecasting Procedure |
proportion | Inference on Single Binomial Proportion and Bayesian Computations |
propOverlap | Feature (gene) selection based on the Proportional Overlapping Scores |
propr | Calculating Proportionality Between Vectors of Compositional Data |
PropScrRand | Propensity score methods for assigning treatment in randomized trials |
proPubBills | 'ProPublica' U.S. Congress Bills API Wrapper |
ProPublicaR | Access Functions for ProPublica's APIs |
PROreg | Patient Reported Outcomes Regression Analysis |
PROscorer | Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments |
PROscorerTools | Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures |
PROsetta | Linking Patient-Reported Outcomes Measures |
prospectr | Miscellaneous Functions for Processing and Sample Selection of Spectroscopic Data |
PROSPER | Simulation of Weed Population Dynamics |
protag | Search Tagged Peptides & Draw Highlighted Mass Spectra |
ProteinDescriptors | Generates Various Protein Descriptors for Machine Learning Algorithms |
proteomicdesign | Optimization of a multi-stage proteomic study |
proteomics | Statistical Analysis of High Throughput Proteomics Data |
proto | Prototype Object-Based Programming |
protoclass | Interpretable classification with prototypes |
protoclust | Hierarchical Clustering with Prototypes |
PROTOLIDAR | PRocess TOol LIdar DAta in R |
protolite | Highly Optimized Protocol Buffer Serializers |
proton | The Proton Game |
prototest | Inference on Prototypes from Clusters of Features |
protr | Generating Various Numerical Representation Schemes for Protein Sequences |
ProTrackR | Manipulate and Play 'ProTracker' Modules |
protViz | Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics |
proustr | Tools for Natural Language Processing in French |
provenance | Statistical Toolbox for Sedimentary Provenance Analysis |
provGraphR | Creates Adjacency Matrices for Lineage Searches |
provParseR | Pulls Information from Prov.Json Files |
provSummarizeR | Summarizes Provenance Related to Inputs and Outputs of a Script or Console Commands |
provViz | Provenance Visualizer |
proxy | Distance and Similarity Measures |
proxyC | Computes Proximity in Large Sparse Matrices |
prozor | Minimal Protein Set Explaining Peptide Spectrum Matches |
prrd | Parallel Runs of Reverse Depends |
PRROC | Precision-Recall and ROC Curves for Weighted and Unweighted Data |
PRSim | Stochastic Simulation of Streamflow Time Series using Phase Randomization |
pRSR | Test of Periodicity using Response Surface Regression |
pryr | Tools for Computing on the Language |
Przewodnik | Datasets and Functions Used in the Book 'Przewodnik po Pakiecie R' |
ps | List, Query, Manipulate System Processes |
PSAgraphics | Propensity Score Analysis Graphics |
psbcGroup | Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors |
PSCBS | Analysis of Parent-Specific DNA Copy Numbers |
pscl | Political Science Computational Laboratory |
pscore | Standardizing Physiological Composite Risk Endpoints |
psd | Adaptive, Sine-Multitaper Power Spectral Density and Cross Spectrum Estimation |
psda | Polygonal Symbolic Data Analysis |
psData | Download Regularly Maintained Political Science Data Sets |
pse | Parameter Space Exploration with Latin Hypercubes |
pseudo | Computes Pseudo-Observations for Modeling |
pseudorank | Pseudo-Ranks |
pseval | Methods for Evaluating Principal Surrogates of Treatment Response |
PSF | Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm |
psfmi | Prediction Model Selection and Performance Evaluation in Multiple Imputed Datasets |
psgp | Projected Spatial Gaussian Process Methods |
pSI | Specificity Index Statistic |
psica | Decision Tree Analysis for Probabilistic Subgroup Identification with Multiple Treatments |
psidR | Build Panel Data Sets from PSID Raw Data |
PSIMEX | SIMEX Algorithm on Pedigree Structures |
PSLM2015 | Pakistan Social and Living Standards Measurement Survey 2014-15 |
pso | Particle Swarm Optimization |
psoptim | Particle Swarm Optimization |
pspearman | Spearman's rank correlation test |
pspline | Penalized Smoothing Splines |
pspline.inference | Estimation of Characteristics of Seasonal and Sporadic Infectious Disease Outbreaks Using Generalized Additive Modeling with Penalized Basis Splines |
PSPManalysis | Analysis of Physiologically Structured Population Models |
pssm | Piecewise Exponential Model for Time to Progression and Time from Progression to Death |
PSSMCOOL | Features Extracted from Position Specific Scoring Matrix (PSSM) |
pssmooth | Flexible and Efficient Evaluation of Principal Surrogates/Treatment Effect Modifiers |
psSubpathway | Flexible Identification of Phenotype-Specific Subpathways |
PST | Probabilistic Suffix Trees and Variable Length Markov Chains |
Pstat | Assessing Pst Statistics |
pstest | Specification Tests for Parametric Propensity Score Models |
PsumtSim | Simulations of grouped responses relative to baseline |
PSW | Propensity Score Weighting Methods for Dichotomous Treatments |
PSweight | Propensity Score Weighting for Causal Inference |
psy | Various procedures used in psychometry |
psych | Procedures for Psychological, Psychometric, and Personality Research |
psychmeta | Psychometric Meta-Analysis Toolkit |
psycho | Efficient and Publishing-Oriented Workflow for Psychological Science |
psychometric | Applied Psychometric Theory |
psychomix | Psychometric Mixture Models |
psychonetrics | Structural Equation Modeling and Confirmatory Network Analysis |
psychotools | Psychometric Modeling Infrastructure |
psychotree | Recursive Partitioning Based on Psychometric Models |
psychReport | Reproducible Reports in Psychology |
psychrolib | Psychrometric Properties of Moist and Dry Air |
psychTools | Tools to Accompany the 'psych' Package for Psychological Research |
PsyControl | CUSUM Person Fit Statistics |
psymonitor | Real Time Monitoring of Asset Markets: Bubbles and Crisis |
psyosphere | Analyse GPS Data |
psyphy | Functions for analyzing psychophysical data in R |
psyverse | Decentralized Unequivocality in Psychological Science |
PTAk | Principal Tensor Analysis on k Modes |
PTE | Personalized Treatment Evaluator |
pterrace | Persistence Terrace for Topological Data Analysis |
ptest | Periodicity Tests in Short Time Series |
ptinpoly | Point-in-Polyhedron Test (2D and 3D) |
ptmixed | Poisson-Tweedie Generalized Linear Mixed Model |
PtProcess | Time Dependent Point Process Modelling |
pts2polys | Construct Polygons Summarising the Location and Variability of Point Sets |
ptsuite | Tail Index Estimation for Power Law Distributions |
ptvapi | Access the 'Public Transport Victoria' Timetable API |
ptw | Parametric Time Warping |
ptwikiwords | Words Used in Portuguese Wikipedia |
PTwins | Percentile Estimation of Fetal Weight for Twins by Chorionicity |
PTXQC | Quality Report Generation for MaxQuant and mzTab Results |
ptycho | Bayesian Variable Selection with Hierarchical Priors |
PubBias | Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53 |
pubchunks | Fetch Sections of XML Scholarly Articles |
pubh | A Toolbox for Public Health and Epidemiology |
PublicationBias | Sensitivity Analysis for Publication Bias in Meta-Analyses |
publipha | Bayesian Meta-Analysis with Publications Bias and P-Hacking |
Publish | Format Output of Various Routines in a Suitable Way for Reports and Publication |
pubmed.mineR | Text Mining of PubMed Abstracts |
pubmedR | Gathering Metadata About Publications, Grants, Clinical Trials from 'PubMed' Database |
PubMedWordcloud | 'Pubmed' Word Clouds |
pubtatordb | Create and Query a Local 'PubTator' Database |
PUlasso | High-Dimensional Variable Selection with Presence-Only Data |
pullword | R Interface to Pullword Service |
pulseTD | Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data |
pumilioR | Pumilio in R |
puniform | Meta-Analysis Methods Correcting for Publication Bias |
PUPAIM | A Collection of Physical and Chemical Adsorption Isotherm Models |
PupillometryR | A Unified Pipeline for Pupillometry Data |
PupilPre | Preprocessing Pupil Size Data |
PurBayes | Bayesian Estimation of Tumor Purity and Clonality |
pureseqtmr | Predict Transmembrane Protein Topology |
purge | Purge Training Data from Models |
purging | Simple Method for Purging Mediation Effects among Independent Variables |
purrr | Functional Programming Tools |
purrrlyr | Tools at the Intersection of 'purrr' and 'dplyr' |
Pursuit | Projection Pursuit |
pushbar | Create Sliders for 'Shiny' |
pushoverr | Send Push Notifications using Pushover |
puzzle | Assembling Data Sets for Non-Linear Mixed Effects Modeling |
PVAClone | Population Viability Analysis with Data Cloning |
pvaluefunctions | Creates and Plots P-Value Functions, S-Value Functions, Confidence Distributions and Confidence Densities |
pvar | Calculation and Application of p-Variation |
pvclass | P-Values for Classification |
pvclust | Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling |
PVR | Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve |
pvsR | An R package to interact with the Project Vote Smart API for scientific research |
PWD | Time Series Regression Using the Power Weighted Densities (PWD) Approach |
PWEALL | Design and Monitoring of Survival Trials Accounting for Complex Situations |
PWFSLSmoke | Utilities for Working with Air Quality Monitoring Data |
pwr | Basic Functions for Power Analysis |
pwr2 | Power and Sample Size Analysis for One-way and Two-way ANOVA Models |
pwr2ppl | Power Analyses for Common Designs (Power to the People) |
pwrAB | Power Analysis for AB Testing |
pwrFDR | FDR Power |
pwrRasch | Statistical Power Simulation for Testing the Rasch Model |
pwt | Penn World Table (Versions 5.6, 6.x, 7.x) |
pwt8 | Penn World Table (Version 8.x) |
pwt9 | Penn World Table (Version 9.x) |
pxR | PC-Axis with R |
pxweb | R Interface to PXWEB APIs |
PxWebApiData | PX-Web Data by API |
pycno | Pycnophylactic Interpolation |
pyinit | Pena-Yohai Initial Estimator for Robust S-Regression |
pyMTurkR | A Client for the 'MTurk' Requester API |
pyramid | Draw Population Pyramid |
pysd2r | API to 'Python' Library 'pysd' |
PythonInR | Use 'Python' from Within 'R' |
pzfx | Read and Write 'GraphPad Prism' Files |
qad | Quantification of Asymmetric Dependence |
QAIG | Automatic Item Generator for Quantitative Multiple-Choice Items |
qap | Heuristics for the Quadratic Assignment Problem (QAP) |
qat | Quality Assurance Toolkit |
QBAsyDist | Asymmetric Distributions and Quantile Estimation |
qboxplot | Quantile-Based Boxplot |
QCA | Qualitative Comparative Analysis |
QCAfalsePositive | Tests for Type I Error in Qualitative Comparative Analysis (QCA) |
qcapower | Estimate Power and Required Sample Size in QCA |
QCApro | Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis |
QCAtools | Helper Functions for QCA in R |
qcc | Quality Control Charts |
qccrs | Quality Control Charts under Repetitive Sampling |
QCEWAS | Fast and Easy Quality Control of EWAS Results Files |
QCGWAS | Quality Control of Genome Wide Association Study results |
qcQpcr | Histone ChIP-Seq qPCR Analyzer |
qcr | Quality Control Review |
QCSimulator | A 5-Qubit Quantum Computing Simulator |
QCSIS | Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation |
qcv | Quantifying Construct Validity |
qdap | Bridging the Gap Between Qualitative Data and Quantitative Analysis |
qdapDictionaries | Dictionaries and Word Lists for the 'qdap' Package |
qdapRegex | Regular Expression Removal, Extraction, and Replacement Tools |
qdapTools | Tools for the 'qdap' Package |
QDComparison | Modern Nonparametric Tools for Two-Sample Quantile and Distribution Comparisons |
qdm | Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments |
QFASA | Quantitative Fatty Acid Signature Analysis |
qfasar | Quantitative Fatty Acid Signature Analysis in R |
QFRM | Pricing of Vanilla and Exotic Option Contracts |
qgam | Smooth Additive Quantile Regression Models |
QGameTheory | Quantum Game Theory Simulator |
qGaussian | The q-Gaussian Distribution |
qgcomp | Quantile G-Computation |
qgg | Statistical Tools for Quantitative Genetic Analyses |
QGglmm | Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models |
qgraph | Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation |
qgshiny | A 'shiny' Application for Active Learning Instruction in Introductory Quantitative Genetics |
qgtools | Generalized Quantitative Genetics Data Analyses |
qha | Qualitative Harmonic Analysis |
QHOT | QTL Hotspot Detection |
qicharts | Quality Improvement Charts |
qicharts2 | Quality Improvement Charts |
qif | Quadratic Inference Function |
qiitr | R Interface to Qiita API |
qkerntool | Q-Kernel-Based and Conditionally Negative Definite Kernel-Based Machine Learning Tools |
qlcMatrix | Utility Sparse Matrix Functions for Quantitative Language Comparison |
qLearn | Estimation and inference for Q-learning |
QLearning | Reinforcement Learning using the Q Learning Algorithm |
qmap | Statistical Transformations for Post-Processing Climate Model Output |
qmethod | Analysis of Subjective Perspectives Using Q Methodology |
qmix | Finite Quantile Mixture Models |
qMRI | Methods for Quantitative Magnetic Resonance Imaging ('qMRI') |
qmrparser | Parser combinator in R |
qoma.smuggler | Transport Data and Commands Across the 'FAME' / 'R' Border |
qpcR | Modelling and Analysis of Real-Time PCR Data |
qpdf | Split, Combine and Compress PDF Files |
qpmadr | Interface to the 'qpmad' Quadratic Programming Solver |
qqman | Q-Q and Manhattan Plots for GWAS Data |
QQperm | Permutation Based QQ Plot and Inflation Factor Estimation |
qqplotr | Quantile-Quantile Plot Extensions for 'ggplot2' |
qqtest | Self Calibrating Quantile-Quantile Plots for Visual Testing |
qqvases | Animated Normal Quantile-Quantile Plots |
QRAGadget | A 'Shiny' Gadget for Interactive 'QRA' Visualizations |
qrage | Tools that Create D3 JavaScript Force Directed Graph from R |
qrandom | True Random Numbers using the ANU Quantum Random Numbers Server |
QRank | A Novel Quantile Regression Approach for eQTL Discovery |
qrcm | Quantile Regression Coefficients Modeling |
qrcode | QRcode Generator for R |
QRegVCM | Quantile Regression in Varying-Coefficient Models |
qrencoder | Quick Response Code (QR Code) / Matrix Barcode Creator |
QRISK3 | 10-Year Cardiovascular Disease Risk Calculator (QRISK3 2017) |
qrjoint | Joint Estimation in Linear Quantile Regression |
qrLMM | Quantile Regression for Linear Mixed-Effects Models |
QRM | Provides R-Language Code to Examine Quantitative Risk Management Concepts |
qrmdata | Data Sets for Quantitative Risk Management Practice |
qrmix | Quantile Regression Mixture Models |
qrmtools | Tools for Quantitative Risk Management |
qrng | (Randomized) Quasi-Random Number Generators |
qrNLMM | Quantile Regression for Nonlinear Mixed-Effects Models |
qrnn | Quantile Regression Neural Network |
qs | Quick Serialization of R Objects |
QSARdata | Quantitative Structure Activity Relationship (QSAR) Data Sets |
qsort | Scoring Q-Sort Data |
qsub | Running Commands Remotely on 'Gridengine' Clusters |
qte | Quantile Treatment Effects |
qtl | Tools for Analyzing QTL Experiments |
QTL.gCIMapping | QTL Genome-Wide Composite Interval Mapping |
QTL.gCIMapping.GUI | QTL Genome-Wide Composite Interval Mapping with Graphical User Interface |
qtl2 | Quantitative Trait Locus Mapping in Experimental Crosses |
qtl2convert | Convert Data among QTL Mapping Packages |
qtl2fst | Database Storage of Genotype Probabilities for QTL Mapping |
qtl2pleio | Testing Pleiotropy in Multiparental Populations |
qtlbook | Datasets for the R/qtl Book |
qtlc | Densitometric Analysis of Thin-Layer Chromatography Plates |
qtlcharts | Interactive Graphics for QTL Experiments |
qtlDesign | Design of QTL experiments |
qtlhot | Inference for QTL Hotspots |
qtlmt | Tools for Mapping Multiple Complex Traits |
qtlnet | Causal Inference of QTL Networks |
QTLRel | Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees |
QTOCen | Quantile-Optimal Treatment Regimes with Censored Data |
Qtools | Utilities for Quantiles |
QuACN | QuACN: Quantitative Analysis of Complex Networks |
quad | Exact permutation moments of quadratic form statistics |
quadmatrix | Solving Quadratic Matrix Equations |
quadmesh | Quadrangle Mesh |
quadprog | Functions to Solve Quadratic Programming Problems |
quadprogXT | Quadratic Programming with Absolute Value Constraints |
quadrupen | Sparsity by Worst-Case Quadratic Penalties |
qualCI | Causal Inference with Qualitative and Ordinal Information on Outcomes |
QualInt | Test for Qualitative Interactions |
qualityTools | Statistical Methods for Quality Science |
qualmap | Opinionated Approach for Digitizing Semi-Structured Qualitative GIS Data |
qualpalr | Automatic Generation of Qualitative Color Palettes |
qualtRics | Download 'Qualtrics' Survey Data |
qualV | Qualitative Validation Methods |
qualvar | Implements Indices of Qualitative Variation Proposed by Wilcox (1973) |
QUALYPSO | Partitioning Uncertainty Components of an Incomplete Ensemble of Climate Projections |
qualypsoss | Uncertainties of Climate Projections using Smoothing Splines |
Quandl | API Wrapper for Quandl.com |
quantable | Streamline Descriptive Analysis of Quantitative Data Matrices |
quantdates | Manipulate Dates for Finance |
quanteda | Quantitative Analysis of Textual Data |
quanteda.textmodels | Scaling Models and Classifiers for Textual Data |
quantification | Quantification of Qualitative Survey Data |
QuantifQuantile | Estimation of Conditional Quantiles using Optimal Quantization |
quantileDA | Quantile Classifier |
QuantileGradeR | Quantile-Adjusted Restaurant Grading |
QuantileNPCI | Nonparametric Confidence Intervals for Quantiles |
quantilogram | Cross-Quantilogram |
quantities | Quantity Calculus for R Vectors |
quantkriging | Quantile Kriging for Stochastic Simulations with Replication |
quantmod | Quantitative Financial Modelling Framework |
QuantNorm | Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection |
quantoptr | Algorithms for Quantile- And Mean-Optimal Treatment Regimes |
QuantPsyc | Quantitative Psychology Tools |
quantreg | Quantile Regression |
quantreg.nonpar | Nonparametric Series Quantile Regression |
quantregForest | Quantile Regression Forests |
quantregGrowth | Growth Charts via Regression Quantiles |
quantregRanger | Quantile Regression Forests for 'ranger' |
quantspec | Quantile-Based Spectral Analysis of Time Series |
QuantTools | Enhanced Quantitative Trading Modelling |
QuantumClone | Clustering Mutations using High Throughput Sequencing (HTS) Data |
QuantumOps | Performs Common Linear Algebra Operations Used in Quantum Computing and Implements Quantum Algorithms |
quarrint | Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks |
Quartet | Comparison of Phylogenetic Trees Using Quartet and Split Measures |
QuasiSeq | Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood |
QuClu | Quantile-Based Clustering Algorithms |
queryparser | Translate 'SQL' Queries into 'R' Expressions |
questionr | Functions to Make Surveys Processing Easier |
queuecomputer | Computationally Efficient Queue Simulation |
queueing | Analysis of Queueing Networks and Models |
quhomology | Calculation of Homology of Quandles, Racks, Biquandles and Biracks |
quickblock | Quick Threshold Blocking |
quickmapr | Quickly Map and Explore Spatial Data |
quickmatch | Quick Generalized Full Matching |
quickPlot | A System of Plotting Optimized for Speed and Modularity |
quickpsy | Fits Psychometric Functions for Multiple Groups |
quickReg | Build Regression Models Quickly and Display the Results Using 'ggplot2' |
quickregression | Quick Linear Regression |
quiddich | QUick IDentification of DIagnostic CHaracters |
quietR | Simplify Output Verbosity |
quint | Qualitative Interaction Trees |
quokar | Quantile Regression Outlier Diagnostics with K Left Out Analysis |
quotedargs | A Way of Writing Functions that Quote their Arguments |
quRan | Complete Text of the Qur'an |
qvcalc | Quasi Variances for Factor Effects in Statistical Models |
qwraps2 | Quick Wraps 2 |
QZ | Generalized Eigenvalues and QZ Decomposition |
r.blip | Bayesian Network Learning Improved Project |
R.cache | Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations |
R.devices | Unified Handling of Graphics Devices |
R.filesets | Easy Handling of and Access to Files Organized in Structured Directories |
R.huge | Methods for Accessing Huge Amounts of Data [deprecated] |
R.matlab | Read and Write MAT Files and Call MATLAB from Within R |
R.methodsS3 | S3 Methods Simplified |
R.oo | R Object-Oriented Programming with or without References |
R.rsp | Dynamic Generation of Scientific Reports |
R.SamBada | Processing Pipeline for 'SamBada' from Pre- To Post-Processing |
R.temis | Integrated Text Mining Solution |
R.utils | Various Programming Utilities |
R0 | Estimation of R0 and Real-Time Reproduction Number from Epidemics |
R1magic | Compressive Sampling: Sparse Signal Recovery Utilities |
R2019nCoV | Analysis of 2019-nCoV Virus |
R2Addhaz | R2 Measure of Explained Variation under the Additive Hazards Model |
R2admb | 'ADMB' to R Interface Functions |
R2BayesX | Estimate Structured Additive Regression Models with 'BayesX' |
R2BEAT | Multistage Allocation |
r2d2 | Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution |
r2d3 | Interface to 'D3' Visualizations |
R2DGC | Multiple Peak Alignment for 2D Gas Chromatography Mass Spectrometry Metabolomics Analysis |
r2dictionary | A Mini-Dictionary for 'R' and 'Markdown' Writing |
r2dii.analysis | Tools to Calculate Climate Targets for Financial Portfolios |
r2dii.data | Datasets to Align Financial Markets with Climate Goals |
r2dii.match | Tools to Match Financial Portfolios with Climate Data |
r2dRue | 2d Rain Use Efficience model |
R2DT | Translation of Base R-Like Functions for 'data.table' Objects |
r2glmm | Computes R Squared for Mixed (Multilevel) Models |
R2HTML | HTML Exportation for R Objects |
R2jags | Using R to Run 'JAGS' |
R2MLwiN | Running 'MLwiN' from Within R |
R2OpenBUGS | Running OpenBUGS from R |
r2pmml | Convert R Models to PMML |
R2PPT | Simple R Interface to Microsoft PowerPoint using rcom or RDCOMClient |
r2rtf | Easily Create Presentation-Ready Rich Text Format (RTF) Table and Figure |
r2shortcode | Shorten Package Function Names |
r2sundials | Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem |
R2SWF | Convert R Graphics to Flash Animations |
R2ucare | Goodness-of-Fit Tests for Capture-Recapture Models |
R2wd | Write MS-Word documents from R |
R2WinBUGS | Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS' |
R330 | An R package for Stats 330 |
r3PG | Simulating Forest Growth using the 3-PG Model |
R3port | Report Functions to Create HTML and PDF Files |
R4CouchDB | A R Convenience Layer for CouchDB 2.0 |
r4lineups | Statistical Inference on Lineup Fairness |
r4ss | R Code for Stock Synthesis |
r511 | Work with the Bay Area Transportation Commission Application Programming Interface |
R6 | Encapsulated Classes with Reference Semantics |
R62S3 | Automatic Method Generation from R6 |
R6DS | R6 Reference Class Based Data Structures |
r6extended | Extension for 'R6' Base Class |
rabhit | Inference Tool for Antibody Haplotype |
rabi | Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies |
RAC | R Package for Aqua Culture |
RaceID | Identification of Cell Types and Inference of Lineage Trees from Single-Cell RNA-Seq Data |
raceland | Pattern-Based Zoneless Method for Analysis and Visualization of Racial Topography |
racir | Rapid A/Ci Response (RACiR) Data Analysis |
RAD | Fit RAD models to biological data |
RADanalysis | Normalization and Study of Rank Abundance Distributions |
radar | Fundamental Formulas for Radar |
radarBoxplot | Implementation of the Radar-Boxplot |
radarchart | Radar Chart from 'Chart.js' |
RadData | Nuclear Decay Data for Dosimetric Calculations - ICRP 107 |
radiant | Business Analytics using R and Shiny |
radiant.basics | Basics Menu for Radiant: Business Analytics using R and Shiny |
radiant.data | Data Menu for Radiant: Business Analytics using R and Shiny |
radiant.design | Design Menu for Radiant: Business Analytics using R and Shiny |
radiant.model | Model Menu for Radiant: Business Analytics using R and Shiny |
radiant.multivariate | Multivariate Menu for Radiant: Business Analytics using R and Shiny |
radiomics | 'Radiomic' Image Processing Toolbox |
RadioSonde | Tools for plotting skew-T diagrams and wind profiles |
radir | Inverse-Regression Estimation of Radioactive Doses |
radix | 'R Markdown' Format for Scientific and Technical Writing |
radlibs | Build Your Own Madlibs! |
radmixture | Calculate Population Stratification |
RadOnc | Analytical Tools for Radiation Oncology |
radsafer | Radiation Safety |
RadTran | Radon and Soil Gas Transport in 2D Porous Medium |
Radviz | Project Multidimensional Data in 2D Space |
RAdwords | Loading Google Adwords Data into R |
rafalib | Convenience Functions for Routine Data Exploration |
ragg | Graphic Devices Based on AGG |
RagGrid | A Wrapper of the 'JavaScript' Library 'agGrid' |
rags2ridges | Ridge Estimation of Precision Matrices from High-Dimensional Data |
ragt2ridges | Ridge Estimation of Vector Auto-Regressive (VAR) Processes |
ragtop | Pricing Equity Derivatives with Extensions of Black-Scholes |
RAhrefs | 'Ahrefs' API R Interface |
rai | Revisiting-Alpha-Investing for Polynomial Regression |
rainbow | Bagplots, Boxplots and Rainbow Plots for Functional Data |
RAINBOWR | Genome-Wide Association Study with SNP-Set Methods |
raincin | Ranking with Incomplete Information |
raincpc | Obtain and Analyze Daily Rainfall Data from the USA Climate Prediction Center (CPC) |
rainette | The Reinert Method for Textual Data Clustering |
RainfallErosivityFactor | The Rainfall-Runoff Erosivity Factor |
rainfarmr | Stochastic Precipitation Downscaling with the RainFARM Method |
rakeR | Easy Spatial Microsimulation (Raking) in R |
ralger | Easy Web Scraping |
rAltmetric | Retrieves Altmerics Data for Any Published Paper from 'Altmetric.com' |
RAM | R for Amplicon-Sequencing-Based Microbial-Ecology |
Ramble | Parser Combinator for R |
Rambo | The Random Subgraph Model |
rAmCharts | JavaScript Charts Tool |
ramchoice | Estimation and Inference in Random Attention Models |
RAMClustR | Mass Spectrometry Metabolomics Feature Clustering and Interpretation |
ramcmc | Robust Adaptive Metropolis Algorithm |
ramify | Additional Matrix Functionality |
ramlegacy | Download and Read RAM Legacy Stock Assessment Database |
RAMP | Regularized Generalized Linear Models with Interaction Effects |
RAMpath | Structural Equation Modeling Using the Reticular Action Model (RAM) Notation |
ramps | Bayesian Geostatistical Modeling with RAMPS |
ramsvm | Reinforced Angle-Based Multicategory Support Vector Machines |
randaes | Random number generator based on AES cipher |
randcorr | Generate a Random p x p Correlation Matrix |
randgeo | Generate Random 'WKT' or 'GeoJSON' |
RandMeta | Efficient Numerical Algorithm for Exact Inference in Meta Analysis |
randNames | Package Provides Access to Fake User Data |
randnet | Random Network Model Selection and Parameter Tuning |
random | True Random Numbers using RANDOM.ORG |
random.polychor.pa | A Parallel Analysis with Polychoric Correlation Matrices |
RandomCoefficients | Adaptive Estimation in the Linear Random Coefficients Models |
randomcoloR | Generate Attractive Random Colors |
RandomFields | Simulation and Analysis of Random Fields |
RandomFieldsUtils | Utilities for the Simulation and Analysis of Random Fields |
randomForest | Breiman and Cutler's Random Forests for Classification and Regression |
randomForestExplainer | Explaining and Visualizing Random Forests in Terms of Variable Importance |
randomForestSRC | Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC) |
randomGLM | Random General Linear Model Prediction |
randomizationInference | Flexible Randomization-Based Inference |
randomizeBE | Create a Random List for Crossover Studies |
randomizeR | Randomization for Clinical Trials |
randomizr | Easy-to-Use Tools for Common Forms of Random Assignment and Sampling |
randomLCA | Random Effects Latent Class Analysis |
randomNames | Generate Random Given and Surnames |
randomsearch | Random Search for Expensive Functions |
randomUniformForest | Random Uniform Forests for Classification, Regression and Unsupervised Learning |
RandPro | Random Projection with Classification |
randquotes | Get Random Quotes from Quotes on Design API |
randtests | Testing randomness in R |
randtoolbox | Toolbox for Pseudo and Quasi Random Number Generation and Random Generator Tests |
RandVar | Implementation of Random Variables |
rangeBuilder | Occurrence Filtering, Geographic and Taxonomic Standardization and Generation of Species Range Polygons |
rangeMapper | A Platform for the Study of Macro-Ecology of Life History Traits |
rangeModelMetadata | Provides Templates for Metadata Files Associated with Species Range Models |
ranger | A Fast Implementation of Random Forests |
RanglaPunjab | Displays Palette of 5 Colors |
RankAggreg | Weighted Rank Aggregation |
Rankcluster | Model-Based Clustering for Multivariate Partial Ranking Data |
rankdist | Distance Based Ranking Models |
rankFD | Rank-Based Tests for General Factorial Designs |
rankhazard | Rank-Hazard Plots |
RankingProject | The Ranking Project: Visualizations for Comparing Populations |
RankResponse | Ranking Responses in a Single Response Question or a Multiple Response Question |
RANKS | Ranking of Nodes with Kernelized Score Functions |
RANN | Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric |
RAP | Reversal Association Pattern |
rapbase | Base Functions and Resources for Rapporteket |
rapiclient | Dynamic OpenAPI/Swagger Client |
RApiDatetime | R API Datetime |
rapidjsonr | 'Rapidjson' C++ Header Files |
RapidPolygonLookup | POLYGON LOOKUP USING KD TREES |
RAPIDR | Reliable Accurate Prenatal non-Invasive Diagnosis R package |
rapidxmlr | 'Rapidxml' C++ Header Files |
RApiSerialize | R API Serialization |
RaPKod | Random Projection Kernel Outlier Detector |
RAppArmor | Bindings to AppArmor and Security Related Linux Tools |
rappdirs | Application Directories: Determine Where to Save Data, Caches, and Logs |
rapport | A Report Templating System |
rapportools | Miscellaneous (stats) helper functions with sane defaults for reporting |
RaProR | Calculate Sketches using Random Projections to Reduce Large Data Sets |
RAPTOR | Row and Position Tracheid Organizer |
raptr | Representative and Adequate Prioritization Toolkit in R |
Raquifer | Estimate the Water Influx into Hydrocarbon Reservoirs |
rare | Linear Model with Tree-Based Lasso Regularization for Rare Features |
Rarefy | Rarefaction Methods |
rareGE | Testing Gene-Environment Interaction for Rare Genetic Variants |
rareNMtests | Ecological and biogeographical null model tests for comparing rarefaction curves |
Rarity | Calculation of Rarity Indices for Species and Assemblages of Species |
rarms | Access Data from the USDA ARMS Data API |
rARPACK | Solvers for Large Scale Eigenvalue and SVD Problems |
RaschSampler | Rasch Sampler |
rasclass | Supervised Raster Image Classification |
rase | Range Ancestral State Estimation for Phylogeography and Comparative Analyses |
RaSEn | Random Subspace Ensemble Classification |
raster | Geographic Data Analysis and Modeling |
rasterdiv | Diversity Indices for Numerical Matrices |
rasterDT | Fast Raster Summary and Manipulation |
rasterImage | An Improved Wrapper of image() |
rasterize | Rasterize Graphical Output |
rasterKernelEstimates | Kernel Based Estimates on in-Memory Raster Images |
rasterList | A Raster Where Cells are Generic Objects |
rasterly | Easily and Rapidly Generate Raster Image Data with Support for 'Plotly.js' |
rasterpdf | Plot Raster Graphics in PDF Files |
rasterVis | Visualization Methods for Raster Data |
Rata | Automated Test Assembly |
ratelimitr | Rate Limiting for R |
ratematrix | Bayesian Estimation of the Evolutionary Rate Matrix |
rateratio.test | Exact rate ratio test |
raters | A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables |
ratesci | Confidence Intervals for Comparisons of Binomial or Poisson Rates |
RATest | Randomization Tests |
RAthena | Connect to 'AWS Athena' using 'Boto3' ('DBI' Interface) |
RatingScaleReduction | Rating Scale Reduction Procedure |
RationalExp | Rationalizing Rational Expectations. Tests and Deviations |
rationalfun | Manipulation of Rational Functions |
ratios | Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants |
ratPASTA | Processing Acoustic Startle Experimental Data |
rattle | Graphical User Interface for Data Science in R |
rattle.data | Rattle Datasets |
ravelRy | An Interface to the 'Ravelry' API |
rAverage | Parameter Estimation for the Averaging Model of Information Integration Theory |
rAvis | Interface to the Bird-Watching Dataset Proyecto AVIS |
raw | R Actuarial Workshops |
rawKS | Easily Get True-Positive Rate and False-Positive Rate and KS Statistic |
rawr | Retrieve Raw R Code from Popular Tutorials and Websites |
raws.profile | Managing Profiles on Amazon Web Service |
rayimage | Image Processing for Simulated Cameras |
rayrender | Build and Raytrace 3D Scenes |
rayshader | Create Maps and Visualize Data in 2D and 3D |
rbacon | Age-Depth Modelling using Bayesian Statistics |
rbart | Bayesian Trees for Conditional Mean and Variance |
RBaseX | 'BaseX' Client |
rBayesianOptimization | Bayesian Optimization of Hyperparameters |
Rbeast | Bayesian Change-Point Detection and Time Series Decomposition |
rbefdata | BEFdata R package |
rbenchmark | Benchmarking routine for R |
Rbent | Robust Bent Line Regression |
RBesT | R Bayesian Evidence Synthesis Tools |
rBeta2009 | The Beta Random Number and Dirichlet Random Vector Generating Functions |
RBF | Robust Backfitting |
rbgm | Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model |
Rbgs | Reading and Background Subtraction in Videos |
rbhl | Interface to the 'Biodiversity' 'Heritage' Library |
rbi | Interface to 'LibBi' |
rbi.helpers | 'RBi' Helper Functions |
rBiasCorrection | Correct Bias in DNA Methylation Analyses |
rbibutils | Convert Between Bibliography Formats |
rbin | Tools for Binning Data |
rbiom | Read/Write, Transform, and Summarize 'BIOM' Data |
rbiorxiv | Client for the 'bioRxiv' API |
rbiouml | Interact with BioUML Server |
rbison | Interface to the 'USGS' 'BISON' API |
rbit | Binary Indexed Tree |
Rbitcoin | R & bitcoin integration |
rbitcoinchartsapi | R Package for the BitCoinCharts.com API |
RBitmoji | An R Wrapper to the Overly Complicated 'Bitmoji' API |
RblDataLicense | R Interface to 'Bloomberg Data License' |
Rblpapi | R Interface to 'Bloomberg' |
rblt | Bio-Logging Toolbox |
rBMF | Boolean Matrix Factorization |
rbmn | Handling Linear Gaussian Bayesian Networks |
RBMRB | BMRB Data Access and Visualization |
RBNZ | Download Data from the Reserve Bank of New Zealand Website |
rbokeh | R Interface for Bokeh |
Rborist | Extensible, Parallelizable Implementation of the Random Forest Algorithm |
rbounds | Perform Rosenbaum bounds sensitivity tests for matched and unmatched data |
RBPcurve | The Residual-Based Predictiveness Curve |
rbraries | Interface to the 'Libraries.io' API |
rbridge | Restricted Bridge Estimation |
rbscCI | Blyth-Still-Casella Confidence Interval |
rbtc | Bitcoin API |
RBtest | Regression-Based Approach for Testing the Type of Missing Data |
rbtt | Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data |
rbundler | Rbundler manages an application's dependencies systematically and repeatedly |
rbvs | Ranking-Based Variable Selection |
rbw | Residual Balancing Weights for Marginal Structural Models |
RCA | Relational Class Analysis |
RCAL | Regularized Calibrated Estimation |
RCALI | Calculation of the Integrated Flow of Particles Between Polygons |
Rcan | Cancer Registry Data Analysis and Visualisation |
rcane | Different Numeric Optimizations to Estimate Parameter Coefficients |
rcanvec | Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada |
Rcapture | Loglinear Models for Capture-Recapture Experiments |
RCarb | Dose Rate Modelling of Carbonate-Rich Samples |
rcarbon | Calibration and Analysis of Radiocarbon Dates |
rcartocolor | 'CARTOColors' Palettes |
RCassandra | R/Cassandra interface |
rCAT | Conservation Assessment Tools |
rCBA | CBA Classifier |
rcbalance | Large, Sparse Optimal Matching with Refined Covariate Balance |
rcbsubset | Optimal Subset Matching with Refined Covariate Balance |
rcc | Parametric Bootstrapping to Control Rank Conditional Coverage |
rccdates | Date Functions for Swedish Cancer Data |
rccmisc | Miscellaneous R Functions for Swedish Regional Cancer Centers |
rcdd | Computational Geometry |
rcdk | Interface to the 'CDK' Libraries |
rcdklibs | The CDK Libraries Packaged for R |
RCEIM | R Cross Entropy Inspired Method for Optimization |
RcellData | Example Dataset for 'Rcell' Package |
Rcereal | C++11 Header Files for 'cereal' |
RcextTools | Analytical Procedures in Support of Brazilian Public Sector External Auditing |
Rcgmin | Conjugate Gradient Minimization of Nonlinear Functions |
rchallenge | A Simple Data Science Challenge System |
rcheology | Data on Base Packages for Current and Previous Versions of R |
rchess | Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection |
rchie | A Parser for 'ArchieML' |
RchivalTag | Analyzing Archival Tagging Data |
Rchoice | Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters |
rChoiceDialogs | rChoiceDialogs collection |
RChronoModel | Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal |
rcicr | Reverse-Correlation Image-Classification Toolbox |
RCircos | Circos 2D Track Plot |
rcites | R Interface to the Species+ Database |
rcitoid | Client for 'Citoid' |
RClickhouse | A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support |
rClinicalCodes | R tools for integrating with the www.clinicalcodes.org repository |
rclipboard | Shiny/R Wrapper for 'clipboard.js' |
RClone | Partially Clonal Populations Analysis |
RclusTool | Graphical Toolbox for Clustering and Classification of Data Frames |
rCMA | R-to-Java Interface for 'CMA-ES' |
rcmdcheck | Run 'R CMD check' from 'R' and Capture Results |
Rcmdr | R Commander |
RcmdrMisc | R Commander Miscellaneous Functions |
RcmdrPlugin.aRnova | R Commander Plug-in for Repeated-Measures ANOVA |
RcmdrPlugin.BiclustGUI | 'Rcmdr' Plug-in GUI for Biclustering |
RcmdrPlugin.BWS1 | R Commander Plug-in for Case 1 (Object Case) Best-Worst Scaling |
RcmdrPlugin.coin | Rcmdr Coin Plug-In |
RcmdrPlugin.depthTools | R commander Depth Tools Plug-In |
RcmdrPlugin.DoE | R Commander Plugin for (industrial) Design of Experiments |
RcmdrPlugin.EACSPIR | Plugin de R-Commander para el Manual 'EACSPIR' |
RcmdrPlugin.EBM | Rcmdr Evidence Based Medicine Plug-in Package |
RcmdrPlugin.EcoVirtual | Rcmdr EcoVirtual Plugin |
RcmdrPlugin.Export | Export R Output to LaTeX or HTML |
RcmdrPlugin.EZR | R Commander Plug-in for the EZR (Easy R) Package |
RcmdrPlugin.FactoMineR | Graphical User Interface for FactoMineR |
RcmdrPlugin.FuzzyClust | R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means and Gustafson Kessel) |
RcmdrPlugin.GWRM | R Commander Plug-in for Fitting Generalized Waring Regression Models |
RcmdrPlugin.HH | Rcmdr Support for the HH Package |
RcmdrPlugin.IPSUR | An IPSUR Plugin for the R Commander |
RcmdrPlugin.KMggplot2 | R Commander Plug-in for Data Visualization with 'ggplot2' |
RcmdrPlugin.lfstat | 'Rcmdr' Plug-in for Low Flow Analysis |
RcmdrPlugin.MA | Graphical User Interface for Conducting Meta-Analyses in R |
RcmdrPlugin.MPAStats | R Commander Plug-in for MPA Statistics |
RcmdrPlugin.NMBU | R Commander Plug-in for University Level Applied Statistics |
RcmdrPlugin.orloca | A GUI for Planar Location Problems |
RcmdrPlugin.PcaRobust | R Commander Plug-in for Robust Principal Component Analysis |
RcmdrPlugin.plotByGroup | Rcmdr plots by group using lattice |
RcmdrPlugin.pointG | Graphical POINT of view for questionnaire data Rcmdr Plug-In |
RcmdrPlugin.qual | Rcmdr plugin for quality control course |
RcmdrPlugin.RiskDemo | R Commander Plug-in for Risk Demonstration |
RcmdrPlugin.RMTCJags | R MTC Jags 'Rcmdr' Plugin |
RcmdrPlugin.ROC | Rcmdr Receiver Operator Characteristic Plug-In PACKAGE |
RcmdrPlugin.sampling | Tools for sampling in Official Statistical Surveys |
RcmdrPlugin.SCDA | Rcmdr Plugin for Designing and Analyzing Single-Case Experiments |
RcmdrPlugin.SLC | SLC Rcmdr Plug-in |
RcmdrPlugin.sos | Efficiently search the R help pages |
RcmdrPlugin.steepness | Steepness Rcmdr Plug-in |
RcmdrPlugin.survival | R Commander Plug-in for the 'survival' Package |
RcmdrPlugin.sutteForecastR | 'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR' |
RcmdrPlugin.TeachingDemos | Rcmdr Teaching Demos Plug-in |
RcmdrPlugin.TeachStat | RCommander Plugin for Teaching Statistical Methods |
RcmdrPlugin.temis | Graphical Integrated Text Mining Solution |
RcmdrPlugin.UCA | UCA Rcmdr Plug-in |
RcmdrPlugin.WorldFlora | R Commander Plug-in for the 'WorldFlora' Package |
rco | The R Code Optimizer |
RColetum | Access your Coletum's Data from API |
Rcolombos | Interface to Colombos Compendia using the Exposed REST API |
RColorBrewer | ColorBrewer Palettes |
rcompanion | Functions to Support Extension Education Program Evaluation |
RConics | Computations on Conics |
rcoreoa | Client for the CORE API |
rcorpora | A Collection of Small Text Corpora of Interesting Data |
rcosmo | Cosmic Microwave Background Data Analysis |
Rcplex | R Interface to CPLEX |
RCPmod | Regions of Common Profiles Modelling with Mixtures-of-Experts |
Rcpp | Seamless R and C++ Integration |
Rcpp11 | R and C++11 |
RcppAlgos | High Performance Tools for Combinatorics and Computational Mathematics |
RcppAnnoy | 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors |
RcppAPT | 'Rcpp' Interface to the APT Package Manager |
RcppArmadillo | 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library |
RcppBDT | Rcpp bindings for the Boost Date_Time library |
RcppBigIntAlgos | Factor Big Integers with the Quadratic Sieve |
RcppCCTZ | 'Rcpp' Bindings for the 'CCTZ' Library |
RcppClassic | Deprecated 'classic' 'Rcpp' 'API' |
RcppClassicExamples | Examples using 'RcppClassic' to Interface R and C++ |
RcppCNPy | Read-Write Support for 'NumPy' Files via 'Rcpp' |
RcppCWB | 'Rcpp' Bindings for the 'Corpus Workbench' ('CWB') |
RcppDate | 'date' C++ Header Library for Date and Time Functionality |
RcppDE | Global Optimization by Differential Evolution in C++ |
RcppDist | 'Rcpp' Integration of Additional Probability Distributions |
RcppDL | Deep Learning Methods via Rcpp |
RcppDynProg | 'Rcpp' Dynamic Programming |
RcppEigen | 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library |
RcppEigenAD | Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce First and Second Order Partial Derivatives |
RcppEnsmallen | Header-Only C++ Mathematical Optimization Library for 'Armadillo' |
RcppExamples | Examples using 'Rcpp' to Interface R and C++ |
RcppFaddeeva | 'Rcpp' Bindings for the 'Faddeeva' Package |
RcppGetconf | 'Rcpp' Interface for Querying System Configuration Variables |
RcppGreedySetCover | Greedy Set Cover |
RcppGSL | 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices |
RcppHMM | Rcpp Hidden Markov Model |
RcppHNSW | 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors |
RcppHungarian | Solves Minimum Cost Bipartite Matching Problems |
RcppMeCab | 'rcpp' Wrapper for 'mecab' Library |
RcppMLPACK | 'Rcpp' Integration for the 'MLPACK' Library |
RcppMsgPack | 'MsgPack' C++ Header Files and Interface Functions for R |
RcppNLoptExample | 'Rcpp' Package Illustrating Header-Only Access to 'NLopt' |
RcppNumerical | 'Rcpp' Integration for Numerical Computing Libraries |
RcppParallel | Parallel Programming Tools for 'Rcpp' |
RcppProgress | An Interruptible Progress Bar with OpenMP Support for C++ in R Packages |
RcppQuantuccia | R Bindings to the 'Quantuccia' Header-Only Essentials of 'QuantLib' |
RcppRedis | 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library |
RcppRoll | Efficient Rolling / Windowed Operations |
RcppSimdJson | 'Rcpp' Bindings for the 'simdjson' Header-Only Library for 'JSON' Parsing |
RcppSMC | Rcpp Bindings for Sequential Monte Carlo |
RcppStreams | 'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing |
RcppThread | R-Friendly Threading in C++ |
RcppTN | Rcpp-Based Truncated Normal Distribution RNG and Family |
RcppTOML | 'Rcpp' Bindings to Parser for Tom's Obvious Markup Language |
RcppUUID | Generating Universally Unique Identificators |
RcppXPtrUtils | XPtr Add-Ons for 'Rcpp' |
RcppXsimd | Xsimd C++ Header-Only Library Files |
RcppXts | Interface the xts API via Rcpp |
RcppZiggurat | 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations |
Rcrawler | Web Crawler and Scraper |
rcreds | Securely Use Credentials Within R Scripts |
rcrimeanalysis | An Implementation of Crime Analysis Methods |
RCriteo | Loading Criteo Data into R |
Rcriticor | Pierre-Goldwin Correlogram |
rCRM | Regularized Continual Reassessment Method |
RCRnorm | An Integrated Regression Model for Normalizing 'NanoString nCounter' Data |
rcrossref | Client for Various 'CrossRef' 'APIs' |
rcrtan | Criterion-Referenced Test Analysis |
rcrypt | Symmetric File Encryption Using GPG |
Rcsdp | R Interface to the CSDP Semidefinite Programming Library |
RCSF | Airborne LiDAR Filtering Method Based on Cloth Simulation |
Rcssplot | Styling of Graphics using Cascading Style Sheets |
RCT | Assign Treatments, Power Calculations, Balances, Impact Evaluation of Experiments |
rcube | Simulations and Visualizations of Rubik's Cube (with Mods) |
RCurl | General Network (HTTP/FTP/...) Client Interface for R |
RCzechia | Spatial Objects of the Czech Republic |
Rd2md | Markdown Reference Manuals |
Rd2roxygen | Convert Rd to 'Roxygen' Documentation |
RDataCanvas | Basic Runtime Support for Datacanvas.io |
rdatacite | Client for the 'DataCite' API |
rdataretriever | R Interface to the Data Retriever |
rdbnomics | Download DBnomics Data |
Rdca | DCA Tools for Decline Rate Analysis and EUR Forecast |
rdd | Regression Discontinuity Estimation |
rddensity | Manipulation Testing Based on Density Discontinuity |
rddtools | Toolbox for Regression Discontinuity Design ('RDD') |
rde | Reproducible Data Embedding |
rDEA | Robust Data Envelopment Analysis (DEA) for R |
rDecode | Descent-Based Calibrated Optimal Direct Estimation |
rdefra | Interact with the UK AIR Pollution Database from DEFRA |
rdetools | Relevant Dimension Estimation (RDE) in Feature Spaces |
rdflib | Tools to Manipulate and Query Semantic Data |
rdfp | An Implementation of the 'DoubleClick for Publishers' API |
RDFTensor | Different Tensor Factorization (Decomposition) Techniques for RDF Tensors (Three-Mode-Tensors) |
rdhs | API Client and Dataset Management for the Demographic and Health Survey (DHS) Data |
rdi | Repertoire Dissimilarity Index |
rdian | Client Library for The Guardian |
Rdice | A Collection of Functions to Experiment Dice Rolls |
RDIDQ | It perform Quality check on data |
RDieHarder | R Interface to the 'DieHarder' RNG Test Suite |
Rdimtools | Dimension Reduction and Estimation Methods |
rdist | Calculate Pairwise Distances |
Rdistance | Distance-Sampling Analyses for Density and Abundance Estimation |
rdiversity | Measurement and Partitioning of Similarity-Sensitive Biodiversity |
rdlocrand | Local Randomization Methods for RD Designs |
RDML | Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files |
rdmulti | Analysis of RD Designs with Multiple Cutoffs or Scores |
rDNAse | Generating Various Numerical Representation Schemes of DNA Sequences |
rdnb | R Interface to the 'Deutsche Nationalbibliothek (German National Library) API' |
rdoc | Colourised R Documentation |
RDocumentation | Integrate R with 'RDocumentation' |
RDota2 | An R Steam API Client for Valve's Dota2 |
rDotNet | Low-Level Interface to the '.NET' Virtual Machine Along the Lines of the R C/Call API |
rdoxygen | Create Doxygen Documentation for Source Code |
Rdpack | Update and Manipulate Rd Documentation Objects |
rdpower | Power Calculations for RD Designs |
rdrobust | Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs |
Rdroolsjars | Rdrools JARs |
rdrop2 | Programmatic Interface to the 'Dropbox' API |
Rdrw | Univariate and Multivariate Damped Random Walk Processes |
rdryad | Access for Dryad Web Services |
RDS | Respondent-Driven Sampling |
Rdsdp | R Interface to DSDP Semidefinite Programming Library |
Rdsm | Threads Environment for R |
RDSTK | An R wrapper for the Data Science Toolkit API |
RDStreeboot | RDS Tree Bootstrap Method |
Rdta | Data Transforming Augmentation for Linear Mixed Models |
rdtLite | Provenance Collector |
Rdtq | Density Tracking by Quadrature |
Rduino | A Microcontroller Interface |
rdwd | Select and Download Climate Data from 'DWD' (German Weather Service) |
rdwplus | An Implementation of IDW-PLUS |
reactable | Interactive Data Tables Based on 'React Table' |
reactlog | Reactivity Visualizer for 'shiny' |
reactR | React Helpers |
ReacTran | Reactive Transport Modelling in 1d, 2d and 3d |
read.dbc | Read Data Stored in DBC (Compressed DBF) Files |
read.gb | Open GenBank Files |
readABF | Loads Axon Binary Files |
readabs | Download and Tidy Time Series Data from the Australian Bureau of Statistics |
readbitmap | Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF) |
readBrukerFlexData | Reads Mass Spectrometry Data in Bruker *flex Format |
readbulk | Read and Combine Multiple Data Files |
ReadDIM | Read ESA SNAP Processed Raster Format in R |
reader | Suite of Functions to Flexibly Read Data from Files |
readHAC | Read Acoustic HAC Format |
readit | Effortlessly Read Any Rectangular Data |
readJDX | Import Data in the JCAMP-DX Format |
readMLData | Reading Machine Learning Benchmark Data Sets in Different Formats |
readmnist | Read MNIST Dataset |
readMzXmlData | Reads Mass Spectrometry Data in mzXML Format |
readobj | Fast Reader for 'Wavefront' OBJ 3D Scene Files |
readODS | Read and Write ODS Files |
readOffice | Read Text Out of Modern Office Files |
readr | Read Rectangular Text Data |
readroper | Simply Read ASCII Single and Multicard Polling Datasets |
readsdmx | Read SDMX-XML Data |
readsdr | Translate Models from System Dynamics Software into 'R' |
readstata13 | Import 'Stata' Data Files |
readtext | Import and Handling for Plain and Formatted Text Files |
readtextgrid | Read in a 'Praat' 'TextGrid' File |
readthat | Read Text Data |
readwritesqlite | Enhanced Reading and Writing for 'SQLite' Databases |
readxl | Read Excel Files |
readxlsb | Read 'Excel' Binary (.xlsb) Workbooks |
RealVAMS | Multivariate VAM Fitting |
reams | Resampling-Based Adaptive Model Selection |
Rearrangement | Monotonize Point and Interval Functional Estimates by Rearrangement |
REAT | Regional Economic Analysis Toolbox |
REBayes | Empirical Bayes Estimation and Inference |
rebird | R Client for the eBird Database of Bird Observations |
rebmix | Finite Mixture Modeling, Clustering & Classification |
rebus | Build Regular Expressions in a Human Readable Way |
rebus.base | Core Functionality for the 'rebus' Package |
rebus.datetimes | Date and Time Extensions for the 'rebus' Package |
rebus.numbers | Numeric Extensions for the 'rebus' Package |
rebus.unicode | Unicode Extensions for the 'rebus' Package |
RECA | Relevant Component Analysis for Supervised Distance Metric Learning |
recapr | Two Event Mark-Recapture Experiment |
recexcavAAR | 3D Reconstruction of Archaeological Excavations |
rechonest | R Interface to Echo Nest API |
ReCiPa | Redundancy Control in Pathways databases |
recipes | Preprocessing Tools to Create Design Matrices |
reclin | Record Linkage Toolkit |
recluster | Ordination Methods for the Analysis of Beta-Diversity Indices |
recmap | Compute the Rectangular Statistical Cartogram |
recoder | A Simple and Flexible Recoder |
recombinator | Recombinate Nested Lists to Dataframes |
recommenderlab | Lab for Developing and Testing Recommender Algorithms |
recommenderlabBX | Book-Crossing Dataset (BX) for 'recommenderlab' |
recommenderlabJester | Jester Dataset for 'recommenderlab' |
Recon | Computational Tools for Economics |
reconstructr | Session Reconstruction and Analysis |
recorder | Toolkit to Validate New Data for a Predictive Model |
RecordLinkage | Record Linkage Functions for Linking and Deduplicating Data Sets |
Records | Record Values and Record Times |
RecordTest | Inference Tools Based on Record Statistics |
recosystem | Recommender System using Matrix Factorization |
RecurRisk | Recurrence Risk Assessment Tool |
recurse | Computes Revisitation Metrics for Trajectory Data |
red | IUCN Redlisting Tools |
reda | Recurrent Event Data Analysis |
ReDaMoR | Relational Data Modeler |
REdaS | Companion Package to the Book 'R: Einführung durch angewandte Statistik' |
redcapAPI | Interface to 'REDCap' |
REDCapExporter | Automated Construction of R Data Packages from REDCap Projects |
REDCapR | Interaction Between R and REDCap |
RedditExtractoR | Reddit Data Extraction Toolkit |
reddPrec | Reconstruction of Daily Data - Precipitation |
REddyProc | Post Processing of (Half-)Hourly Eddy-Covariance Measurements |
REddyProcNCDF | Reading Data from NetCDF Files for 'REddyProc' |
redist | Markov Chain Monte Carlo Methods for Redistricting Simulation |
redland | RDF Library Bindings in R |
redlistr | Tools for the IUCN Red List of Ecosystems and Species |
rEDM | Empirical Dynamic Modeling ('EDM') |
Redmonder | Microsoft(r)-Inspired Color Palettes |
redR | REgularization by Denoising (RED) |
redux | R Bindings to 'hiredis' |
REEMtree | Regression Trees with Random Effects for Longitudinal (Panel) Data |
ref.ICAR | Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data |
referenceIntervals | Reference Intervals |
RefFreeEWAS | EWAS using Reference-Free DNA Methylation Mixture Deconvolution |
refinr | Cluster and Merge Similar Values Within a Character Vector |
RefManageR | Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management |
refnr | Refining Data Table Using a Set of Formulas |
refset | Subsets with Reference Semantics |
refuge | Locate Trans and Intersex-Friendly Toilets |
refund | Regression with Functional Data |
refund.shiny | Interactive Plotting for Functional Data Analyses |
regclass | Tools for an Introductory Class in Regression and Modeling |
RegClust | Cluster analysis via regression coefficients |
REGENT | Risk Estimation for Genetic and Environmental Traits |
regexPipes | Wrappers Around 'base::grep()' for Use with Pipes |
regexSelect | Regular Expressions in 'shiny' Select Lists |
regexTestR | A 'Shiny' App to Test Regular Expressions in an R Environment |
reghelper | Helper Functions for Regression Analysis |
regions | Processing Regional Statistics |
registr | Curve Registration for Exponential Family Functional Data |
registry | Infrastructure for R Package Registries |
reglogit | Simulation-Based Regularized Logistic Regression |
regmed | Regularized Mediation Analysis |
regmedint | Regression-Based Causal Mediation Analysis with an Interaction Term |
regnet | Network-Based Regularization for Generalized Linear Models |
regplot | Enhanced Regression Nomogram Plot |
regpro | Nonparametric Regression |
regrap | Reverse Graphical Approaches |
regress | Gaussian Linear Models with Linear Covariance Structure |
RegressionFactory | Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions |
regressoR | Regression Data Analysis System |
regrrr | Toolkit for Compiling, (Post-Hoc) Testing, and Plotting Regression Results |
regRSM | Random Subspace Method (RSM) for Linear Regression |
RegSDC | Information Preserving Regression-Based Tools for Statistical Disclosure Control |
regsem | Regularized Structural Equation Modeling |
regspec | Non-Parametric Bayesian Spectrum Estimation for Multirate Data |
regsubseq | Detect and Test Regular Sequences and Subsequences |
regtest | Regression testing |
regtools | Regression and Classification Tools |
RegularizedSCA | Regularized Simultaneous Component Based Data Integration |
rehh | Searching for Footprints of Selection using 'Extended Haplotype Homozygosity' Based Tests |
rehh.data | Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests |
rehydratoR | Downloads Tweets from a List of Tweet IDs |
reinforcedPred | Reinforced Risk Prediction with Budget Constraint |
reinforcelearn | Reinforcement Learning |
ReinforcementLearning | Model-Free Reinforcement Learning |
ReIns | Functions from "Reinsurance: Actuarial and Statistical Aspects" |
reinstallr | Search and Install Missing Packages |
reinsureR | Reinsurance Treaties Application |
rel | Reliability Coefficients |
rela | Item Analysis Package with Standard Errors |
relabeLoadings | Relabel Loadings from MCMC Output for Confirmatory Factor Analysis |
relaimpo | Relative Importance of Regressors in Linear Models |
relatable | Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations |
Relatedness | Maximum Likelihood Estimation of Relatedness using EM Algorithm |
relations | Data Structures and Algorithms for Relations |
relaxo | Relaxed Lasso |
reldist | Relative Distribution Methods |
Relectoral | Electoral Analysis |
relen | Compute Relative Entropy |
relevent | Relational Event Models |
Relexon | Explore the UK's National Power Grid Datasets |
relgam | Reluctant Generalized Additive Models |
Reliability | Functions for estimating parameters in software reliability models |
reliaR | Package for some probability distributions |
relimp | Relative Contribution of Effects in a Regression Model |
RelimpPCR | Relative Importance PCA Regression |
relMix | Relationship Inference for DNA Mixtures |
relSim | Relative Simulator |
relsurv | Relative Survival |
RelValAnalysis | Relative Value Analysis |
rem | Relational Event Models (REM) |
rematch | Match Regular Expressions with a Nicer 'API' |
rematch2 | Tidy Output from Regular Expression Matching |
remedy | 'RStudio' Addins to Simplify 'Markdown' Writing |
remindR | Insert and Extract "Reminders" from Function Comments |
rEMM | Extensible Markov Model for Modelling Temporal Relationships Between Clusters |
remMap | Regularized Multivariate Regression for Identifying Master Predictors |
remote | Empirical Orthogonal Teleconnections in R |
remoter | Remote R: Control a Remote R Session from a Local One |
remotes | R Package Installation from Remote Repositories, Including 'GitHub' |
remss | Refining Evaluation Methodology on Stage System |
rENA | Epistemic Network Analysis |
REndo | Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables |
Renext | Renewal Method for Extreme Values Extrapolation |
renpow | Renewable Power Systems and the Environment |
rentrez | 'Entrez' in R |
renv | Project Environments |
Renvlp | Computing Envelope Estimators |
RenvModule | Interface to Allow Full Use of the Environment Modules System for Unix |
ReorderCluster | Reordering the dendrogram according to the class labels |
RepaymentPlan | Calculation of Mortgage Plan or Repayment Plan |
repeated | Non-Normal Repeated Measurements Models |
RepeatedHighDim | Global tests for expression data of high-dimensional sets of molecular features |
repec | Access RePEc Data Through API |
repfdr | Replicability Analysis for Multiple Studies of High Dimension |
REPLesentR | Presentations in the REPL |
Replicate | Statistical Metrics for Multisite Replication Studies |
replicateBE | Average Bioequivalence with Expanding Limits (ABEL) |
replicatedpp2w | Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns |
Replication | Test Replications by Means of the Prior Predictive p-Value |
replicationInterval | Replication Interval Functions |
Repliscope | Replication Timing Profiling using DNA Copy Number |
repmis | Miscellaneous Tools for Reproducible Research |
repo | A Data-Centered Data Flow Manager |
RepoGenerator | Generates a Project and Repo for Easy Initialization of a Workshop |
repolr | Repeated Measures Proportional Odds Logistic Regression |
reportr | A General Message and Error Reporting System |
reportReg | An Easy Way to Report Regression Analysis |
reportROC | An Easy Way to Report ROC Analysis |
reporttools | Generate LaTeX Tables of Descriptive Statistics |
REPPlab | R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit |
repr | Serializable Representations |
represent | Determine the representativity of two multidimensional data sets |
represtools | Reproducible Research Tools |
reprex | Prepare Reproducible Example Code via the Clipboard |
reproducer | Reproduce Statistical Analyses and Meta-Analyses |
reproducible | A Set of Tools that Enhance Reproducibility Beyond Package Management |
reproj | Coordinate System Transformations for Generic Map Data |
REPTILE | Regulatory DNA Element Prediction |
repurrrsive | Examples of Recursive Lists and Nested or Split Data Frames |
reqres | Powerful Classes for HTTP Requests and Responses |
REQS | R/EQS Interface |
request | High Level 'HTTP' Client |
requireR | R Source Code Modularizer |
rerddap | General Purpose Client for 'ERDDAP' Servers |
rerddapXtracto | Extracts Environmental Data from 'ERDDAP' Web Services |
REREFACT | Reordering and/or Reflecting Factors for Simulation Studies with Exploratory Factor Analysis |
reReg | Recurrent Event Regression |
rerf | Randomer Forest |
resample | Resampling Functions |
resampledata | Data Sets for Mathematical Statistics with Resampling in R |
rescue | Bootstrap Imputation for Single-Cell RNA-Seq Data |
reservoir | Tools for Analysis, Design, and Operation of Water Supply Storages |
reshape | Flexibly Reshape Data |
reshape2 | Flexibly Reshape Data: A Reboot of the Reshape Package |
ResistorArray | Electrical Properties of Resistor Networks |
resourcer | Resource Resolver |
ResourceSelection | Resource Selection (Probability) Functions for Use-Availability Data |
respirometry | Tools for Conducting and Analyzing Respirometry Experiments |
RESS | Integrates R and Essentia |
REST | RcmdrPlugin Easy Script Templates |
restatapi | Search and Retrieve Data from Eurostat Database |
restfulr | R Interface to RESTful Web Services |
restimizeapi | Functions for Working with the 'www.estimize.com' Web Services |
restlos | Robust Estimation of Location and Scatter |
restorepoint | Debugging with Restore Points |
restrictedMVN | Multivariate Normal Restricted by Affine Constraints |
restriktor | Restricted Statistical Estimation and Inference for Linear Models |
RestRserve | A Framework for Building HTTP API |
resumer | Build Resumes with R |
rethinker | RethinkDB Client |
reticulate | Interface to 'Python' |
retimes | Reaction Time Analysis |
retistruct | Retinal Reconstruction Program |
retractcheck | Retraction Scanner |
retrodesign | Tools for Type S (Sign) and Type M (Magnitude) Errors |
retrosheet | Import Professional Baseball Data from 'Retrosheet' |
retry | Repeated Evaluation |
reutils | Talk to the NCBI EUtils |
reval | Repeated Function Evaluation for Sensitivity Analysis |
revdbayes | Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis |
revealedPrefs | Revealed Preferences and Microeconomic Rationality |
revealjs | R Markdown Format for 'reveal.js' Presentations |
RevEcoR | Reverse Ecology Analysis on Microbiome |
revengc | Reverse Engineering Summarized Data |
reverseR | Linear Regression Stability to Significance Reversal |
revgeo | Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing |
revss | Robust Estimation in Very Small Samples |
revtools | Tools to Support Evidence Synthesis |
revulyticsR | Connect to Your 'Revulytics' Data |
reweight | Adjustment of Survey Respondent Weights |
rewie | Data Preparation and Diagnostics for Random Effects Within Estimator |
rex | Friendly Regular Expressions |
Rexperigen | R Interface to Experigen |
rexpokit | R Wrappers for EXPOKIT; Other Matrix Functions |
Rfacebook | Access to Facebook API via R |
rfacebookstat | Load Data from Facebook API Marketing |
Rfast | A Collection of Efficient and Extremely Fast R Functions |
Rfast2 | A Collection of Efficient and Extremely Fast R Functions II |
rFDSN | Get Seismic Data from the International Federation of Digital Seismograph Networks |
RfEmpImp | Multiple Imputation using Chained Random Forests |
rFerns | Random Ferns Classifier |
RFGLS | Rapid Feasible Generalized Least Squares |
rFIA | Space-Time Estimation of Forest Variables using the FIA Database |
rfigshare | An R Interface to 'figshare' |
RFinanceYJ | RFinanceYJ |
rfinterval | Predictive Inference for Random Forests |
rfishbase | R Interface to 'FishBase' |
RFishBC | Back-Calculation of Fish Length |
rfisheries | 'Programmatic Interface to the 'openfisheries.org' API' |
rfishnet2 | Exploratory Data Analysis for FishNet2 Data |
Rfit | Rank-Based Estimation for Linear Models |
rflexscan | The Flexible Spatial Scan Statistic |
rflights | Query Plane Tickets using the 'Kiwi' API |
RFLPtools | Tools to analyse RFLP data |
rfm | Recency, Frequency and Monetary Value Analysis |
RFmerge | Merging of Satellite Datasets with Ground Observations using Random Forests |
rfml | MarkLogic NoSQL Database Server in-Database Analytics for R |
rfoaas | R Interface to 'FOAAS' |
RFOC | Graphics for Spherical Distributions and Earthquake Focal Mechanisms |
Rfolding | The Folding Test of Unimodality |
RForcecom | Data Integration Feature for Force.com and Salesforce.com |
rfordummies | Code Examples to Accompany the Book "R for Dummies" |
rforensicbatwing | BATWING for Calculating Forensic Trace-Suspect Match Probabilities |
RFormatter | R Source Code Formatter |
rfPermute | Estimate Permutation p-Values for Random Forest Importance Metrics |
Rfractran | A 'FRACTRAN' Interpreter and Some Helper Functions |
RFreak | R/FrEAK interface |
rFSA | Feasible Solution Algorithm for Finding Best Subsets and Interactions |
Rfssa | Functional Singular Spectrum Analysis |
rfUtilities | Random Forests Model Selection and Performance Evaluation |
rfVarImpOOB | Unbiased Variable Importance for Random Forests |
rfviz | Interactive Visualization Tool for Random Forests |
RGA | A Google Analytics API Client |
Rga4gh | An Interface to the GA4GH API |
rgabriel | Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot |
rGammaGamma | Gamma convolutions for methylation array background correction |
Rgb | The R Genome Browser |
rgbif | Interface to the Global 'Biodiversity' Information Facility API |
RGBM | LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction |
Rgbp | Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data |
RGCCA | Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data |
RGCxGC | Preprocessing and Multivariate Analysis of Bidimensional Gas Chromatography Data |
rgdal | Bindings for the 'Geospatial' Data Abstraction Library |
rgdax | Wrapper for 'Coinbase Pro (GDAX)' Cryptocurrency Exchange |
RGeckoboard | R API for Geckoboard |
rGEDI | NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing |
rgen | Random Sampling Distribution C++ Routines for Armadillo |
RGenData | Generates Multivariate Nonnormal Data and Determines How Many Factors to Retain |
RGENERATE | Tools to Generate Vector Time Series |
RGENERATEPREC | Tools to Generate Daily-Precipitation Time Series |
RGenetics | R packages for genetics research |
rgenius | Get 'Genius' API Lyrics |
rgenoud | R Version of GENetic Optimization Using Derivatives |
RGeode | Geometric Density Estimation |
rgeolocate | IP Address Geolocation |
rgeopat2 | Additional Functions for 'GeoPAT' 2 |
rgeoprofile | Geographic Profiling Methods for Serial Crime Analysis |
rgeos | Interface to Geometry Engine - Open Source ('GEOS') |
rgexf | Build, Import and Export GEXF Graph Files |
RGF | Regularized Greedy Forest |
rgho | Access WHO Global Health Observatory Data from R |
RGIFT | Create quizzes in GIFT Format |
RGISTools | Handling Multiplatform Satellite Images |
rgl | 3D Visualization Using OpenGL |
rglobi | R Interface to Global Biotic Interactions |
Rglpk | R/GNU Linear Programming Kit Interface |
rglwidget | 'rgl' in 'htmlwidgets' Framework |
rGoodData | GoodData API Client Package |
RGoogleAnalytics | R Wrapper for the Google Analytics API |
RGoogleAnalyticsPremium | Unsampled Data in R for Google Analytics Premium Accounts |
RGoogleFit | R Interface to Google Fit API |
RgoogleMaps | Overlays on Static Maps |
rgoogleslides | R Interface to Google Slides |
rgr | Applied Geochemistry EDA |
RGraphics | Data and Functions from the Book R Graphics, Third Edition |
rgrass7 | Interface Between GRASS 7 Geographical Information System and R |
RGreenplum | Interface to 'Greenplum' Database |
rGroovy | Groovy Language Integration |
rgsp | Repetitive Group Sampling Plan Based on Cpk |
RGtk2 | R Bindings for Gtk 2.8.0 and Above |
rgw | Goodman-Weare Affine-Invariant Sampling |
RH2 | DBI/RJDBC Interface to H2 Database |
rhandsontable | Interface to the 'Handsontable.js' Library |
RHawkes | Renewal Hawkes Process |
rHealthDataGov | Retrieve data sets from the HealthData.gov data API |
rhierbaps | Clustering Genetic Sequence Data Using the HierBAPS Algorithm |
rhli | An R Implementation of the FIS MarketMap C-Toolkit |
rhmc | Hamiltonian Monte Carlo |
rhmmer | Utilities Parsing 'HMMER' Results |
RHMS | Hydrologic Modelling System for R Users |
rhnerm | Random Heteroscedastic Nested Error Regression |
rhoR | Rho for Inter Rater Reliability |
rhosp | Side Effect Risks in Hospital : Simulation and Estimation |
Rhpc | Permits *apply() Style Dispatch for 'HPC' |
RHPCBenchmark | Benchmarks for High-Performance Computing Environments |
RhpcBLASctl | Control the Number of Threads on 'BLAS' |
rHpcc | Interface between HPCC and R |
RHRV | Heart Rate Variability Analysis of ECG Data |
RHT | Regularized Hotelling's T-square Test for Pathway (Gene Set) Analysis |
rhub | Connect to 'R-hub' |
rhymer | Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words |
ri | ri: R package for performing randomization-based inference for experiments |
ri2 | Randomization Inference for Randomized Experiments |
RI2by2 | Randomization Inference for Treatment Effects on a Binary Outcome |
RIA | Radiomics Image Analysis Toolbox for Medial Images |
ribd | Pedigree-based Relatedness Coefficients |
ribiosUtils | Utilities from and Interface to the Bioinfo-C (BIOS) Library |
ricegeneann | Gene Annotation of Rice (Oryza Sativa L.spp.japonica) |
riceidconverter | Convert Biological ID from RAP or MSU to SYMBOL for Oryza Sativa |
riceware | A Diceware Passphrase Implementation |
rich | Computes and Compares Species Richnesses |
RichR | Enrichment for Diseases in a Set of Genes |
RIdeogram | Drawing SVG Graphics to Visualize and Map Genome-Wide Data on Idiograms |
ridge | Ridge Regression with Automatic Selection of the Penalty Parameter |
RidgeFusion | R Package for Ridge Fusion in Statistical Learning |
ridigbio | Interface to the iDigBio Data API |
Ridit | Ridit Analysis (An extension of the Kruskal-Wallis Test.) |
ridittools | Useful Functions for Ridit Analysis |
riem | Accesses Weather Data from the Iowa Environment Mesonet |
RiemBase | Functions and C++ Header Files for Computation on Manifolds |
RiemBaseExt | Extension to 'RiemBase' Package |
RiemGrassmann | Inference, Learning, and Optimization on Grassmann Manifold |
RiemStiefel | Inference, Learning, and Optimization on Stiefel Manifold |
Riex | IEX Stocks and Market Data |
rif | Client for 'Neuroscience' Information Framework 'APIs' |
rifle | Sparse Generalized Eigenvalue Problem |
RIFS | Random Iterated Function System (RIFS) |
riingo | An R Interface to the 'Tiingo' Stock Price API |
rijkspalette | Create Colour Palettes Based on Famous Artworks from the Rijksmuseum |
Rilostat | ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service |
RImageJROI | Read 'ImageJ' Region of Interest (ROI) Files |
RImagePalette | Extract the Colors from Images |
RImpact | Calculates Measures of Scholarly Impact |
ring | Circular / Ring Buffers |
RInno | An Installation Framework for Shiny Apps |
RInside | C++ Classes to Embed R in C++ (and C) Applications |
RInSp | R Individual Specialization (RInSp) |
Rinstapkg | An Implementation of the 'Instagram' API Using Tidy Principles |
rIntervalTree | An Interval Tree Tool for Real Numbers |
rintrojs | Wrapper for the 'Intro.js' Library |
rio | A Swiss-Army Knife for Data I/O |
rioja | Analysis of Quaternary Science Data |
rIP | Detects Fraud in Online Surveys by Tracing, Scoring, and Visualizing IP Addresses |
Rip46 | Utils for IP4 and IP6 Addresses |
ripe | Rerun 'Magrittr' Pipelines |
Rirt | Data Analysis and Parameter Estimation Using Item Response Theory |
RISCA | Causal Inference and Prediction in Cohort-Based Analyses |
rise | Conduct RISE Analysis |
rIsing | High-Dimensional Ising Model Selection |
Risk | Computes 26 Financial Risk Measures for Any Continuous Distribution |
riskclustr | Functions to Study Etiologic Heterogeneity |
riskCommunicator | G-Computation to Estimate Interpretable Epidemiological Effects |
riskParityPortfolio | Design of Risk Parity Portfolios |
RiskPortfolios | Computation of Risk-Based Portfolios |
riskPredictClustData | Assessing Risk Predictions for Clustered Data |
riskR | Risk Management |
riskRegression | Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks |
risksetROC | Riskset ROC curve estimation from censored survival data |
riskSimul | Risk Quantification for Stock Portfolios under the T-Copula Model |
riskyr | Rendering Risk Literacy more Transparent |
RISmed | Download Content from NCBI Databases |
Ritc | Isothermal Titration Calorimetry (ITC) Data Analysis |
ritis | Integrated Taxonomic Information System Client |
RItools | Randomization Inference Tools |
riv | Robust Instrumental Variables Estimator |
RiverBuilder | River Generation for Given Data Sets |
riverdist | River Network Distance Computation and Applications |
RiverLoad | Load Estimation of River Compounds with Different Methods |
rivernet | Read, Analyze and Plot River Networks |
riverplot | Sankey or Ribbon Plots |
rivervis | River Visualisation Tool |
Rivivc | In vitro in vivo correlation linear level A |
rivr | Steady and Unsteady Open-Channel Flow Computation |
rjade | A Clean, Whitespace-Sensitive Template Language for Writing HTML |
RJafroc | Analyzing Diagnostic Observer Performance Studies |
rjags | Bayesian Graphical Models using MCMC |
rJava | Low-Level R to Java Interface |
rjazz | Official Client for 'Jazz' |
RJDBC | Provides Access to Databases Through the JDBC Interface |
RJDemetra | Interface to 'JDemetra+' Seasonal Adjustment Software |
rjdmarkdown | 'rmarkdown' Extension for Formatted 'RJDemetra' Outputs |
rjdqa | Quality Assessment for Seasonal Adjustment |
rje | Miscellaneous Useful Functions for Statistics |
rjmcmc | Reversible-Jump MCMC Using Post-Processing |
rJPSGCS | R-Interface to Gene Drop Simulation from JPSGCS |
RJSDMX | R Interface to SDMX Web Services |
rjson | JSON for R |
rjsonapi | Consumer for APIs that Follow the JSON API Specification |
RJSONIO | Serialize R Objects to JSON, JavaScript Object Notation |
RJSplot | Interactive Graphs with R |
rjstat | Handle 'JSON-stat' Format in R |
rjwsacruncher | Interface to the 'JWSACruncher' of 'JDemetra+' |
rJython | R interface to Python via Jython |
rkafka | Using Apache 'Kafka' Messaging Queue Through 'R' |
rkafkajars | External Jars Required for Package 'rkafka' |
RKEA | R/KEA Interface |
RKEAjars | R/KEA Interface Jars |
RKEEL | Using KEEL in R Code |
RKEELdata | Datasets from 'KEEL' for it Use in 'RKEEL' |
RKEELjars | Java Executable .jar Files for 'RKEEL' |
RKelly | Translate Odds and Probabilities |
rkeops | Kernel Operations on the GPU, with Autodiff, without Memory Overflows |
RKHSMetaMod | Ridge Group Sparse Optimization Problem for Estimation of a Meta Model Based on Reproducing Kernel Hilbert Spaces |
rKIN | (Kernel) Isotope Niche Estimation |
RkMetrics | Hybrid Mortality Estimation |
rknn | Random KNN Classification and Regression |
Rknots | Topological Analysis of Knotted Proteins, Biopolymers and 3D Structures |
rKolada | Access Data from the 'Kolada' Database in R |
RKorAPClient | 'KorAP' Web Service Client Package |
rkt | Mann-Kendall Test, Seasonal and Regional Kendall Tests |
RKUM | Robust Kernel Unsupervised Methods |
rkvo | Read Key/Value Pair Observations |
Rlab | Functions and Datasets Required for ST370 class |
Rlabkey | Data Exchange Between R and 'LabKey' Server |
rLakeAnalyzer | Lake Physics Tools |
rlang | Functions for Base Types and Core R and 'Tidyverse' Features |
rlas | Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data |
rlc | Create Interactive Linked Charts with Minimal Code |
rld | Analyze and Design Repeated Low-Dose Challenge Experiments |
Rlda | Bayesian LDA for Mixed-Membership Clustering Analysis |
rLDCP | Text Generation from Data |
RLeafAngle | Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients |
rleafmap | Interactive Maps with R and Leaflet |
rlecuyer | R Interface to RNG with Multiple Streams |
rless | Leaner Style Sheets |
rlfsm | Simulations and Statistical Inference for Linear Fractional Stable Motions |
rLFT | Processing Linear Features |
Rlgt | Bayesian Exponential Smoothing Models with Trend Modifications |
Rlibeemd | Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN) |
rLiDAR | LiDAR Data Processing and Visualization |
rLindo | R Interface to LINDO API |
Rlinkedin | Access to the LinkedIn API via R |
Rlinsolve | Iterative Solvers for (Sparse) Linear System of Equations |
rlist | A Toolbox for Non-Tabular Data Manipulation |
rlmDataDriven | Robust Regression with Data Driven Tuning Parameter |
rlme | Rank-Based Estimation and Prediction in Random Effects Nested Models |
Rlof | R Parallel Implementation of Local Outlier Factor(LOF) |
RLogicalOps | Process Logical Operations |
RLRsim | Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models |
RLT | Reinforcement Learning Trees |
rLTP | R Interface to the 'LTP'-Cloud Service |
RLumCarlo | Monte-Carlo Methods for Simulating Luminescence Phenomena |
RLumShiny | 'Shiny' Applications for the R Package 'Luminescence' |
rly | 'Lex' and 'Yacc' |
RM.weights | Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood |
RM2 | Revenue Management and Pricing Package |
RM2006 | RiskMetrics 2006 Methodology |
rma.exact | Exact Confidence Intervals for Random Effects Meta-Analyses |
RMaCzek | Czekanowski's Diagrams |
rmaf | Refined Moving Average Filter |
Rmagic | MAGIC - Markov Affinity-Based Graph Imputation of Cells |
rmake | Makefile Generator for R Analytical Projects |
RMallow | Fit Multi-Modal Mallows' Models to Ranking Data |
Rmalschains | Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R |
rmangal | 'Mangal' Client |
rmapshaper | Client for 'mapshaper' for 'Geospatial' Operations |
rmapzen | Client for 'Mapzen' and Related Map APIs |
rmargint | Robust Marginal Integration Procedures |
RMariaDB | Database Interface and 'MariaDB' Driver |
RmarineHeatWaves | Detect Marine Heat Waves and Marine Cold Spells |
RMark | R Code for Mark Analysis |
rmarkdown | Dynamic Documents for R |
rmatio | Read and Write 'Matlab' Files |
RMAWGEN | Multi-Site Auto-Regressive Weather GENerator |
Rmbal | Estimate Original Hydrocarbon in Place and Reservoir Performance |
rmcfs | The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery |
rmcorr | Repeated Measures Correlation |
rmd | Easily Install and Load the R Markdown Family |
rmda | Risk Model Decision Analysis |
rmdcev | Multiple Discrete-Continuous Extreme Value (MDCEV) Model |
rmdfiltr | 'Lua' filters for R Markdown |
rmdformats | HTML Output Formats and Templates for 'rmarkdown' Documents |
rmdHelpers | Helper Functions for Rmd Documents |
rmdpartials | Partial 'rmarkdown' Documents to Prettify your Reports |
rmdplugr | Plugins for R Markdown Formats |
rmdshower | 'R' 'Markdown' Format for 'shower' Presentations |
rMEA | Synchrony in Motion Energy Analysis (MEA) Time-Series |
RmecabKo | An 'Rcpp' Interface for Eunjeon Project |
RMediation | Mediation Analysis Confidence Intervals |
rmeta | Meta-Analysis |
rmetalog | R Implementation of the Metalog Distribution |
rmetasim | An Individual-Based Population Genetic Simulation Environment |
rmgarch | Multivariate GARCH Models |
rmi | Mutual Information Estimators |
rminer | Data Mining Classification and Regression Methods |
rmio | Provides 'mio' C++11 Header Files |
Rmisc | Rmisc: Ryan Miscellaneous |
Rmixmod | Classification with Mixture Modelling |
RmixmodCombi | Combining Mixture Components for Clustering |
RMixpanel | API for Mixpanel |
RMixtComp | Mixture Models with Heterogeneous and (Partially) Missing Data |
RMixtCompIO | Mixture Models with Heterogeneous and (Partially) Missing Data |
RMixtCompUtilities | Utility Functions for 'MixtComp' Outputs |
RMKdiscrete | Sundry Discrete Probability Distributions |
RMKL | Multiple Kernel Learning for Classification or Regression Problems |
RMOA | Connect R with MOA for Massive Online Analysis |
RMOAjars | External jars Required for Package RMOA |
rModeling | A Framework of Cross-Validation |
rmonad | A Monadic Pipeline System |
rMorningStar | Mutual Funds Performance Metrics |
Rmosek | The R to MOSEK Optimization Interface |
Rmpfr | R MPFR - Multiple Precision Floating-Point Reliable |
Rmpi | Interface (Wrapper) to MPI (Message-Passing Interface) |
RMPSH | Recursive Modified Pattern Search on Hyper-Rectangle |
rmpw | Causal Mediation Analysis Using Weighting Approach |
rMR | Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions |
rmRNAseq | RNA-Seq Analysis for Repeated-Measures Data |
rms | Regression Modeling Strategies |
rms.gof | Root-mean-square goodness-of-fit test for simple null hypothesis |
rmsb | Bayesian Regression Modeling Strategies |
rmsfact | Amazing Random Facts About the World's Greatest Hacker |
rmsfuns | Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors |
Rmst | Computerized Adaptive Multistage Testing |
RMThreshold | Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis |
RMTL | Regularized Multi-Task Learning |
RMTstat | Distributions, Statistics and Tests derived from Random Matrix Theory |
rmumps | Wrapper for MUMPS Library |
rmutil | Utilities for Nonlinear Regression and Repeated Measurements Models |
rMVP | Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS Tool |
rmweather | Tools to Conduct Meteorological Normalisation on Air Quality Data |
RMySQL | Database Interface and 'MySQL' Driver for R |
rmytarget | Load Data from 'MyTarget API v2' |
RNAseqNet | Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation |
rnaseqWrapper | Wrapper for several R packages and scripts to automate RNA-seq analysis |
RNAsmc | RNA Secondary Structure Module Mining, Comparison and Plotting |
rnassqs | Access the NASS 'Quick Stats' API |
RNAstructureModuleMiner | RNA Secondary Structure Comparison and Module Mining |
rnaturalearth | World Map Data from Natural Earth |
rnaturalearthdata | World Vector Map Data from Natural Earth Used in 'rnaturalearth' |
RnavGraphImageData | Image Data Used in the Loon Package Demos |
RNaviCell | Visualization of High-Throughput Data on Large-Scale Biological Networks |
rnbp | Wrapper for the National Bank of Poland API |
RNCBIEUtilsLibs | EUtils libraries for use in the R environment |
RNCEP | Obtain, Organize, and Visualize NCEP Weather Data |
rncl | An Interface to the Nexus Class Library |
RND | Risk Neutral Density Extraction Package |
rNeighborGWAS | Testing Neighbor Effects in Marker-Based Regressions |
rNeighborQTL | Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects |
RNentropy | Entropy Based Method for the Detection of Significant Variation in Gene Expression Data |
rneos | XML-RPC Interface to NEOS |
rnetcarto | Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R) |
RNetCDF | Interface to 'NetCDF' Datasets |
RNetLogo | Provides an Interface to the Agent-Based Modelling Platform 'NetLogo' |
RNewsflow | Tools for Comparing Text Messages Across Time and Media |
RNeXML | Semantically Rich I/O for the 'NeXML' Format |
RNGforGPD | Random Number Generation for Generalized Poisson Distribution |
rngSetSeed | Seeding the Default RNG with a Numeric Vector |
rngtools | Utility Functions for Working with Random Number Generators |
rngWELL | Toolbox for WELL Random Number Generators |
rngwell19937 | Random number generator WELL19937a with 53 or 32 bit output |
RNHANES | Facilitates Analysis of CDC NHANES Data |
RNifti | Fast R and C++ Access to NIfTI Images |
RNiftyReg | Image Registration Using the 'NiftyReg' Library |
Rnightly | A Wrapper of the 'JavaScript' Library 'Nightly' |
rNMF | Robust Nonnegative Matrix Factorization |
Rnmr1D | Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra |
rnn | Recurrent Neural Network |
rnoaa | 'NOAA' Weather Data from R |
rNOMADS | An R Interface to the NOAA Operational Model Archive and Distribution System |
RNOmni | Rank Normal Transformation Omnibus Test |
rnpn | Interface to the National 'Phenology' Network 'API' |
rnr | Rosenbaum and Rubin Sensitivity |
RNRCS | Download NRCS Data |
rnrfa | UK National River Flow Archive Data from R |
Rnumerai | Interface to the Numerai Machine Learning Tournament API |
roadoi | Find Free Versions of Scholarly Publications via Unpaywall |
ROAuth | R Interface For OAuth |
RobAStBase | Robust Asymptotic Statistics |
RobAStRDA | Interpolation Grids for Packages of the 'RobASt' - Family of Packages |
robcbi | Conditionally Unbiased Bounded Influence Estimates |
robCompositions | Compositional Data Analysis |
robcor | Robust Correlations |
robcp | Robust Change-Point Tests |
roben | Robust Bayesian Variable Selection for Gene-Environment Interactions |
robeth | R Functions for Robust Statistics |
robets | Forecasting Time Series with Robust Exponential Smoothing |
RobExtremes | Optimally Robust Estimation for Extreme Value Distributions |
robfilter | Robust Time Series Filters |
robFitConGraph | Graph-Constrained Robust Covariance Estimation |
RobGARCHBoot | Robust Bootstrap Forecast Densities for GARCH Models |
robin | ROBustness in Network |
RobinHood | Interface for the RobinHood.com No Commission Investing Platform |
robis | Ocean Biodiversity Information System (OBIS) Client |
RobLox | Optimally Robust Influence Curves and Estimators for Location and Scale |
RobLoxBioC | Infinitesimally Robust Estimators for Preprocessing -Omics Data |
RoBMA | Robust Bayesian Meta-Analyses |
robmed | (Robust) Mediation Analysis |
robmixglm | Robust Generalized Linear Models (GLM) using Mixtures |
RobMixReg | Robust Mixture Regression |
Robocoap | Generation of Dynamic Coappearance Matrices Within Texts |
robotstxt | A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker |
RobPer | Robust Periodogram and Periodicity Detection Methods |
robreg3S | Three-Step Regression and Inference for Cellwise and Casewise Contamination |
robregcc | Robust Regression with Compositional Covariates |
RobRex | Optimally Robust Influence Curves for Regression and Scale |
RobRSVD | Robust Regularized Singular Value Decomposition |
RobStatTM | Robust Statistics: Theory and Methods |
robsurvey | Robust Survey Statistics Estimation |
robumeta | Robust Variance Meta-Regression |
robust | Port of the S+ "Robust Library" |
RobustAFT | Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case |
robustarima | Robust ARIMA Modeling |
robustbase | Basic Robust Statistics |
RobustBayesianCopas | Robust Bayesian Copas Selection Model |
robustBLME | Robust Bayesian Linear Mixed-Effects Models using ABC |
RobustCalibration | Robust Calibration of Imperfect Mathematical Models |
robustDA | Robust Mixture Discriminant Analysis |
robustETM | Robust Methods using Exponential Tilt Model |
robustfa | An Object Oriented Solution for Robust Factor Analysis |
robustgam | Robust Estimation for Generalized Additive Models |
RobustGaSP | Robust Gaussian Stochastic Process Emulation |
robustHD | Robust Methods for High-Dimensional Data |
RobustLinearReg | Robust Linear Regressions |
robustlmm | Robust Linear Mixed Effects Models |
robustMVMR | Perform the Robust Multivariable Mendelian Randomization Analysis |
robustrank | Robust Rank-Based Tests |
RobustRankAggreg | Methods for robust rank aggregation |
robustrao | An Extended Rao-Stirling Diversity Index to Handle Missing Data |
robustreg | Robust Regression Functions |
robustsae | Robust Bayesian Small Area Estimation |
robustSingleCell | Robust Clustering of Single Cell RNA-Seq Data |
robustX | 'eXtra' / 'eXperimental' Functionality for Robust Statistics |
robvis | Visualize the Results of Risk-of-Bias (ROB) Assessments |
rocc | ROC Based Classification |
roccv | ROC for Cross Validation Results |
ROCit | Performance Assessment of Binary Classifier with Visualization |
rock | Reproducible Open Coding Kit |
rockchalk | Regression Estimation and Presentation |
RockFab | Rock fabric and strain analysis tools |
rocNIT | Non-Inferiority Test for Paired ROC Curves |
ROCnReg | ROC Curve Inference with and without Covariates |
rococo | Robust Rank Correlation Coefficient and Test |
ROCR | Visualizing the Performance of Scoring Classifiers |
ROCS | Receiver Operating Characteristics Surface |
rocsvm.path | The Entire Solution Paths for ROC-SVM |
rocTree | Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree |
ROCwoGS | Non-parametric estimation of ROC curves without Gold Standard Test |
Rodam | Wrapper Functions for 'ODAM' (Open Data for Access and Mining) Web Services |
RODBC | ODBC Database Access |
RODBCDBI | Provides Access to Databases Through the ODBC Interface |
rodd | Optimal Discriminating Designs |
rODE | Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes |
rodeo | A Code Generator for ODE-Based Models |
rodham | Fetch Hillary Rodham Clinton's Emails |
RODM | R interface to Oracle Data Mining |
ROI | R Optimization Infrastructure |
ROI.models.globalOptTests | 'ROI' Optimization Problems Based on 'globalOptTests' |
ROI.models.miplib | R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances |
ROI.models.netlib | 'ROI' Optimization Problems Based on 'NETLIB-LP' |
ROI.plugin.alabama | 'alabama' Plug-in for the 'R' Optimization Infrastructure |
ROI.plugin.clp | 'Clp (Coin-or linear programming)' Plugin for the 'R' Optimization Interface |
ROI.plugin.cplex | ROI Plug-in CPLEX |
ROI.plugin.deoptim | 'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface |
ROI.plugin.ecos | 'ECOS' Plugin for the 'R' Optimization Infrastructure |
ROI.plugin.glpk | 'ROI' Plug-in 'GLPK' |
ROI.plugin.lpsolve | 'lp_solve' Plugin for the 'R' Optimization Infrastructure |
ROI.plugin.msbinlp | 'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface |
ROI.plugin.neos | 'NEOS' Plug-in for the 'R' Optimization Interface |
ROI.plugin.nloptr | 'nloptr' Plug-in for the 'R' Optimization Infrastructure |
ROI.plugin.optimx | 'optimx' Plug-in for the 'R' Optimization Infrastructure |
ROI.plugin.qpoases | 'qpOASES' Plugin for the 'R' Optimization Infrastructure |
ROI.plugin.quadprog | ROI Plug-in {quadprog} |
ROI.plugin.scs | 'SCS' Plug-in for the 'R' Optimization Infrastructure |
ROI.plugin.symphony | ROI Plug-in SYMPHONY |
roll | Rolling and Expanding Statistics |
rollbar | Error Tracking and Logging |
rolldown | R Markdown Output Formats for Storytelling |
rollmatch | Rolling Entry Matching |
rollRegres | Fast Rolling and Expanding Window Linear Regression |
roloc | Convert Colour Specification to Colour Name |
rolocISCCNBS | A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation |
ROlogit | Fit Rank-Ordered Logit (RO-Logit) Model |
rolr | Finding Optimal Three-Group Splits Based on a Survival Outcome |
RolWinMulCor | Subroutines to Estimate Rolling Window Multiple Correlation |
rolypoly | Identifying Trait-Relevant Functional Annotations |
ROMDB | Get 'OMDB' API Multiple Information |
ROMIplot | Plots Surfaces of Rates of Mortality Improvement |
RonFHIR | Read and Search Interface to the 'HL7 FHIR' REST API |
Rook | Rook - a web server interface for R |
roots | Reconstructing Ordered Ontogenic Trajectories |
RootsExtremaInflections | Finds Roots, Extrema and Inflection Points of a Curve |
rootSolve | Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations |
rootWishart | Distribution of Largest Root for Single and Double Wishart Settings |
ROP | Regression Optimized: Numerical Approach for Multivariate Classification and Regression Trees |
rope | Model Selection with FDR Control of Selected Variables |
ropenaq | Accesses Air Quality Data from the Open Data Platform OpenAQ |
ropenblas | Download, Compile and Link 'OpenBLAS' Library with R |
ROpenCVLite | Install 'OpenCV' |
ropendata | Query and Download 'Rapid7' 'Cybersecurity' Data Sets |
ROpenDota | Access OpenDota Services in R |
ROpenFIGI | R Interface to OpenFIGI |
ropensecretsapi | R Package for the OpenSecrets.org API |
ROpenWeatherMap | R Interface to OpenWeatherMap API |
roperators | Additional Operators to Help you Write Cleaner R Code |
ropercenter | Reproducible Data Retrieval from the Roper Center Data Archive |
Ropj | Import Origin(R) Project Files |
roprov | Low-Level Support for Provenance Capture Between in-Memory R Objects |
ROptEst | Optimally Robust Estimation |
ROptEstOld | Optimally Robust Estimation - Old Version |
roptim | General Purpose Optimization in R using C++ |
roptions | Option Strategies and Valuation |
ROptRegTS | Optimally Robust Estimation for Regression-Type Models |
ROptSpace | Matrix Reconstruction from a Few Entries |
ROracle | OCI Based Oracle Database Interface for R |
rorcid | Interface to the 'Orcid.org' API |
rorqual.morpho | Morphological Allometry of Rorquals |
rorutadis | Robust Ordinal Regression UTADIS |
ROSE | ROSE: Random Over-Sampling Examples |
Rosenbrock | Extended Rosenbrock-Type Densities for Markov Chain Monte Carlo (MCMC) Sampler Benchmarking |
rosetta | Parallel Use of Statistical Packages in Teaching |
rosetteApi | 'Rosette' API |
rosm | Plot Raster Map Tiles from Open Street Map and Other Sources |
rospca | Robust Sparse PCA using the ROSPCA Algorithm |
rosqp | Quadratic Programming Solver using the 'OSQP' Library |
rosr | Create Reproducible Research Projects |
rotasym | Tests for Rotational Symmetry on the Hypersphere |
rotationForest | Fit and Deploy Rotation Forest Models |
rotations | Working with Rotation Data |
Rothermel | Rothermel fire spread model for R |
rotl | Interface to the 'Open Tree of Life' API |
rotor | Log Rotation and Conditional Backups |
RoughSetKnowledgeReduction | Simplification of Decision Tables using Rough Sets |
RoughSets | Data Analysis Using Rough Set and Fuzzy Rough Set Theories |
round | Rounding to Decimal Digits |
RoundAndRound | Plot Objects Moving in Orbits |
roundhouse | An R Wrapper to the 'ICNDb' API |
Routliers | Robust Outliers Detection |
routr | A Simple Router for HTTP and WebSocket Requests |
roxut | Document Unit Tests Roxygen-Style |
roxygen2 | In-Line Documentation for R |
roxygen2md | 'Roxygen' to 'Markdown' |
roxytest | Various Tests with 'roxygen2' |
royston | Royston's H Test: Multivariate Normality Test |
rPACI | Placido Analysis of Corneal Irregularity |
rPackedBar | Packed Bar Charts with 'plotly' |
rpact | Confirmatory Adaptive Clinical Trial Design and Analysis |
rPAex | Automatic Detection of Experimental Unit in Precision Agriculture |
RPANDA | Phylogenetic ANalyses of DiversificAtion |
rpanel | Simple Interactive Controls for R using the 'tcltk' Package |
rpart | Recursive Partitioning and Regression Trees |
rpart.LAD | Least Absolute Deviation Regression Trees |
rpart.plot | Plot 'rpart' Models: An Enhanced Version of 'plot.rpart' |
rpart.utils | Tools for parsing and manipulating rpart objects, including generating machine readable rules |
rpartitions | Code for integer partitioning |
rpartScore | Classification trees for ordinal responses |
rpatrec | Recognising Visual Charting Patterns in Time Series Data |
rpca | RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components |
rpcdsearch | Tools for the Construction of Clinical Code Lists for Primary Care Database Studies |
RPCLR | RPCLR (Random-Penalized Conditional Logistic Regression) |
Rpdb | Read, Write, Visualize and Manipulate PDB Files |
rpdo | Pacific Decadal Oscillation Index Data |
RpeakChrom | Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak |
RPEClust | Random Projection Ensemble Clustering Algorithm |
RPEGLMEN | Gamma and Exponential Generalized Linear Models with Elastic Net Penalty |
RPEIF | Computation and Plots of Influence Functions for Risk and Performance Measures |
RPEnsemble | Random Projection Ensemble Classification |
RPESE | Estimates of Standard Errors for Risk and Performance Measures |
RPEXE.RPEXT | Reduced Piecewise Exponential Estimate/Test Software |
rpf | Response Probability Functions |
rpg | Easy Interface to Advanced PostgreSQL Features |
Rphylip | An R interface for PHYLIP |
Rphylopars | Phylogenetic Comparative Tools for Missing Data and Within-Species Variation |
rphylopic | Get 'Silhouettes' of 'Organisms' from 'Phylopic' |
rpicosat | R Bindings for the 'PicoSAT' SAT Solver |
rpinterest | Access Pinterest API |
rpivotTable | Build Powerful Pivot Tables and Dynamically Slice & Dice your Data |
rplos | Interface to the Search API for 'PLoS' Journals |
rplotengine | R as a Plotting Engine |
rpls | Robust Partial Least Squares |
rplum | Bayesian Age-Depth Modelling of '210Pb'-Dated Cores |
RPMG | Graphical User Interface (GUI) for Interactive R Analysis Sessions |
RPMM | Recursively Partitioned Mixture Model |
rpmodel | P-Model |
rpms | Recursive Partitioning for Modeling Survey Data |
rpnf | Point and Figure Package |
Rpoet | 'PoetryDB' API Wrapper |
Rpolyhedra | Polyhedra Database |
Rpoppler | PDF Tools Based on Poppler |
rportfolio | Portfolio Theory |
rportfolios | Random Portfolio Generation |
rpostgis | R Interface to a 'PostGIS' Database |
rpostgisLT | Managing Animal Movement Data with 'PostGIS' and R |
RPostgres | 'Rcpp' Interface to 'PostgreSQL' |
RPostgreSQL | R Interface to the 'PostgreSQL' Database System |
rPowerSampleSize | Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate |
RPPairwiseDesign | Resolvable partially pairwise balanced design and Space-filling design via association scheme |
RPPanalyzer | Reads, Annotates, and Normalizes Reverse Phase Protein Array Data |
rpql | Regularized PQL for Joint Selection in GLMMs |
rPraat | Interface to Praat |
rpredictit | Interface to the 'PredictIt' API |
rPref | Database Preferences and Skyline Computation |
RPresto | DBI Connector to Presto |
rprev | Estimating Disease Prevalence from Registry Data |
rprime | Functions for Working with 'Eprime' Text Files |
rprintf | Adaptive Builder for Formatted Strings |
RProbSup | Calculates Probability of Superiority |
Rprofet | WOE Transformation and Scorecard Builder |
rprojroot | Finding Files in Project Subdirectories |
RProtoBuf | R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3) |
RPS | Resistant Procrustes Superimposition |
RPscoring | Relative Placement Algorithm |
rpsftm | Rank Preserving Structural Failure Time Models |
rpst | Recursive Partitioning Survival Trees |
rpsychi | Statistics for psychiatric research |
RPtests | Goodness of Fit Tests for High-Dimensional Linear Regression Models |
rptR | Repeatability Estimation for Gaussian and Non-Gaussian Data |
rpubchem | An Interface to the PubChem Collection |
RPublica | ProPublica API Client |
rpubs | Extract Code Block from Rpubs Article |
RPushbullet | R Interface to the Pushbullet Messaging Service |
Rpvt | Estimate the PVT Properties of Reservoir Fluids |
RPyGeo | ArcGIS Geoprocessing via Python |
rQCC | Robust Quality Control Chart |
rqdatatable | 'rquery' for 'data.table' |
RQEntangle | Quantum Entanglement of Bipartite System |
rqPen | Penalized Quantile Regression |
Rquake | Seismic Hypocenter Determination |
RQuantLib | R Interface to the 'QuantLib' Library |
Rquefts | Quantitative Evaluation of the Native Fertility of Tropical Soils |
rquery | Relational Query Generator for Data Manipulation at Scale |
rr | Statistical Methods for the Randomized Response Technique |
rr2 | R2s for Regression Models |
Rramas | Matrix Population Models |
rRAP | Real-Time Adaptive Penalization for Streaming Lasso Models |
rrapply | Revisiting Base Rapply |
rrat | Robust Regression with Asymmetric Heavy-Tail Noise Distributions |
RRate | Estimating Replication Rate for Genome-Wide Association Studies |
Rraven | Connecting R and 'Raven' Sound Analysis Software |
rrBLUP | Ridge Regression and Other Kernels for Genomic Selection |
rrcov | Scalable Robust Estimators with High Breakdown Point |
rrcov3way | Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data |
rrcovHD | Robust Multivariate Methods for High Dimensional Data |
rrcovNA | Scalable Robust Estimators with High Breakdown Point for Incomplete Data |
rrd | Import Data from a RRD (Round Robin Database) File |
Rrdrand | 'DRNG' on Intel CPUs with the 'RdRand' Instruction for R |
rrecsys | Environment for Evaluating Recommender Systems |
rredis | "Redis" Key/Value Database Client |
rredlist | 'IUCN' Red List Client |
RRedshiftSQL | R Interface to the 'Redshift' Database |
rrefine | R Client for OpenRefine API |
rreg | Visualization for Norwegian Health Quality Registries |
Rrelperm | Generate Two- And Three-Phase Relative Permeability Estimates |
rrepast | Invoke 'Repast Simphony' Simulation Models |
rres | Realized Relatedness Estimation and Simulation |
RRF | Regularized Random Forest |
RRI | Residual Randomization Inference for Regression Models |
rriskDistributions | Fitting Distributions to Given Data or Known Quantiles |
rrlda | Robust Regularized Linear Discriminant Analysis |
RRNA | Secondary Structure Plotting for RNA |
rroad | Road Condition Analysis |
rRofex | Interface to 'Matba Rofex' Trading API |
rromeo | Access Publisher Copyright & Self-Archiving Policies via the 'SHERPA/RoMEO' API |
rrpack | Reduced-Rank Regression |
RRphylo | Phylogenetic Ridge Regression Methods for Comparative Studies |
RRPP | Linear Model Evaluation with Randomized Residuals in a Permutation Procedure |
rrr | Reduced-Rank Regression |
RRreg | Correlation and Regression Analyses for Randomized Response Data |
RRRR | Online Robust Reduced-Rank Regression Estimation |
rrscale | Robust Re-Scaling to Better Recover Latent Effects in Data |
rrtable | Reproducible Research with a Table of R Codes |
RRTCS | Randomized Response Techniques for Complex Surveys |
rrum | Bayesian Estimation of the Reduced Reparameterized Unified Model with Gibbs Sampling |
RSA | Response Surface Analysis |
RSADBE | Data related to the book "R Statistical Application Development by Example" |
rsae | Robust Small Area Estimation |
RSAGA | SAGA Geoprocessing and Terrain Analysis |
Rsagacmd | Linking R with the Open-Source 'SAGA-GIS' Software |
RSAlgaeR | Builds Empirical Remote Sensing Models of Water Quality Variables and Analyzes Long-Term Trends |
rsample | General Resampling Infrastructure |
Rsampletrees | MCMC Sampling of Gene Genealogies Conditional on Genetic Data |
Rsampling | Ports the Workflow of "Resampling Stats" Add-in to R |
RSarules | Random Sampling Association Rules from a Transaction Dataset |
rsatscan | Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software |
RSauceLabs | R Wrapper for 'SauceLabs' REST API |
RSBJson | Handle R Requests from R Service Bus Applications with JSON Payloads |
rSCA | An R Package for Stepwise Cluster Analysis |
RSCABS | Rao-Scott Cochran-Armitage by Slices Trend Test |
rscala | Bridge Between 'R' and 'Scala' with Callbacks |
RSCAT | Shadow-Test Approach to Computerized Adaptive Testing |
RScelestial | Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference |
rscimark | SciMark 2.0 Benchmark for Scientific and Numerical Computing |
RSclient | Client for Rserve |
Rsconctdply | Deploys Multiple 'Shiny' Apps using Configuration File |
rsconnect | Deployment Interface for R Markdown Documents and Shiny Applications |
rscontract | Generic implementation of the 'RStudio' connections contract |
rscopus | Scopus Database 'API' Interface |
rscorecard | A Method to Download Department of Education College Scorecard Data |
RSDA | R to Symbolic Data Analysis |
rsdepth | Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis |
rsdmx | Tools for Reading SDMX Data and Metadata |
RSE | Number of Newly Discovered Rare Species Estimation |
rSEA | Simultaneous Enrichment Analysis |
RSeed | Borenstein Analysis |
rseedcalc | Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing |
RSEIS | Seismic Time Series Analysis Tools |
RSelenium | R Bindings for 'Selenium WebDriver' |
rsem | Robust Structural Equation Modeling with Missing Data and Auxiliary Variables |
RSentiment | Analyse Sentiment of English Sentences |
Rserve | Binary R server |
rsf | Report of Statistical Findings in 'bookdown' |
rSFA | Slow Feature Analysis in R |
RSGHB | Functions for Hierarchical Bayesian Estimation: A Flexible Approach |
rSHAPE | Simulated Haploid Asexual Population Evolution |
RSiena | Siena - Simulation Investigation for Empirical Network Analysis |
RsimMosaic | R Simple Image Mosaic Creation Library |
rsimsum | Analysis of Simulation Studies Including Monte Carlo Error |
rsinaica | Download Data from Mexico's Air Quality Information System |
RSIP | Remote Sensing and Image Processing |
RSiteCatalyst | R Client for Adobe Analytics API V1.4 |
RSKC | Robust Sparse K-Means |
rskey | Create Custom 'Rstudio' Keyboard Shortcuts |
rsleep | Analysis of Sleep Data |
rslp | A Stemming Algorithm for the Portuguese Language |
rslurm | Submit R Calculations to a 'Slurm' Cluster |
rsm | Response-Surface Analysis |
RSmartlyIO | Loading Facebook and Instagram Advertising Data from 'Smartly.io' |
Rsmlx | R Speaks 'Monolix' |
RSNNS | Neural Networks using the Stuttgart Neural Network Simulator (SNNS) |
rsnps | Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web |
RSNPset | Efficient Score Statistics for Genome-Wide SNP Set Analysis |
RSocrata | Download or Upload 'Socrata' Data Sets |
Rsolnp | General Non-Linear Optimization |
rsolr | R to Solr Interface |
rspa | Adapt Numerical Records to Fit (in)Equality Restrictions |
rSPARCS | Sites, Population, and Records Cleaning Skills |
rsparkling | R Interface for H2O Sparkling Water |
rsparse | Statistical Learning on Sparse Matrices |
Rspc | Nelson Rules for Control Charts |
rSPDE | Rational Approximations of Fractional Stochastic Partial Differential Equations |
RSpectra | Solvers for Large-Scale Eigenvalue and SVD Problems |
RSpincalc | Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors |
rspiro | Implementation of Spirometry Equations |
Rspotify | Access to Spotify API |
rsppfp | R's Shortest Path Problem with Forbidden Subpaths |
RSPS | RNA-Seq Power Simulation |
rsq | R-Squared and Related Measures |
RSQL | Database Agnostic Package to Generate and Process 'SQL' Queries in R |
RSQLite | 'SQLite' Interface for R |
RSqlParser | Parse 'SQL' Statements |
rSQM | Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping |
RsqMed | Total Mediation Effect Size Measure (R-Squared Measure) under Moderate or High-Dimensional Mediator Settings |
Rssa | A Collection of Methods for Singular Spectrum Analysis |
RSSampling | Ranked Set Sampling |
RSSL | Implementations of Semi-Supervised Learning Approaches for Classification |
RSSOP | Simulation of Supply Reservoir Systems using Standard Operation Policy |
rstack | Stack Data Type as an 'R6' Class |
rstackdeque | Persistent Fast Amortized Stack and Queue Data Structures |
rstan | R Interface to Stan |
rstanarm | Bayesian Applied Regression Modeling via Stan |
rstanemax | Emax Model Analysis with 'Stan' |
rstantools | Tools for Developing R Packages Interfacing with 'Stan' |
rstap | Spatial Temporal Aggregated Predictor Models via 'stan' |
RStata | A Bit of Glue Between R and Stata |
rstatix | Pipe-Friendly Framework for Basic Statistical Tests |
rstatscn | R Interface for China National Data |
rstiefel | Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold |
RStoolbox | Tools for Remote Sensing Data Analysis |
RStorm | Simulate and Develop Streaming Processing |
rstpm2 | Smooth Survival Models, Including Generalized Survival Models |
rstream | Streams of Random Numbers |
RStripe | A Convenience Interface for the Stripe Payment API |
rstudioapi | Safely Access the RStudio API |
rsubgroup | Subgroup Discovery and Analytics |
RSuite | Supports Developing, Building and Deploying R Solution |
rsurface | Design of Rotatable Central Composite Experiments and Response Surface Analysis |
rsurfer | Manipulating 'Freesurfer' Generated Data |
Rsurrogate | Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information |
RSurveillance | Design and Analysis of Disease Surveillance Activities |
RSurvey | Geographic Information System Application |
rsvd | Randomized Singular Value Decomposition |
rsvg | Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays |
RSvgDevice | An R SVG graphics device |
RSVGTipsDevice | An R SVG Graphics Device with Dynamic Tips and Hyperlinks |
RSwissMaps | Plot and Save Customised Swiss Maps |
Rsymphony | SYMPHONY in R |
rSymPy | R Interface to SymPy Computer Algebra System |
rsyncrosim | The R Interface to 'SyncroSim' |
rsyntax | Extract Semantic Relations from Text by Querying and Reshaping Syntax |
rsyslog | Interface to the 'syslog' System Logger |
rt | Interface to the 'Request Tracker' API |
rt.test | Robustified t-Test |
rt3 | Tic-Tac-Toe Package for R |
rTableICC | Random Generation of Contingency Tables |
rtape | Manage and manipulate large collections of R objects stored as tape-like files |
Rtauchen | Discretization of AR(1) Processes |
RTaxometrics | Taxometric Analysis |
RTCC | Detecting Trait Clustering in Environmental Gradients |
RTConnect | Tools for analyzing sales report files of iTunes Connect |
RTD | Simple TD API Client |
RTDE | Robust Tail Dependence Estimation |
rtdists | Response Time Distributions |
rtematres | The rtematres API package |
rtemps | R Templates for Reproducible Data Analyses |
rTensor | Tools for Tensor Analysis and Decomposition |
rTephra | Tephra Transport Modeling |
rtext | R6 Objects for Text and Data |
RTextTools | Automatic Text Classification via Supervised Learning |
RTextureMetrics | Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices |
rtf | Rich Text Format (RTF) Output |
rticles | Article Formats for R Markdown |
rtide | Tide Heights |
rties | Modeling Interpersonal Dynamics |
rtiff | Read and Write TIFF Files |
rtika | R Interface to 'Apache Tika' |
rtimicropem | Supports the Analysis of RTI MicroPEM Output Files |
rtip | Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data |
rtist | A Color Palette Generator |
rtk | Rarefaction Tool Kit |
rtkore | 'STK++' Core Library Integration to 'R' using 'Rcpp' |
RTL | Risk Tool Library |
rtmpt | Fitting RT-MPT Models |
Rtnmin | Truncated Newton Function Minimization with Bounds Constraints |
rtodoist | Create and Manage Todolist using 'Todoist.com' API |
RTOMO | Visualization for Seismic Tomography |
rtop | Interpolation of Data with Variable Spatial Support |
rTorch | R Bindings to 'PyTorch' |
Rtrack | Spatial Navigation Strategy Analysis |
RTransferEntropy | Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy |
rtrek | Datasets and Functions Relating to Star Trek |
rtrends | Analyze Download Logs from the CRAN RStudio Mirror |
RTriangle | Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator |
rtrim | Trends and Indices for Monitoring Data |
rTRNG | Advanced and Parallel Random Number Generation via 'TRNG' |
rts | Raster Time Series Analysis |
rtsdata | R Time Series Intelligent Data Storage |
Rtsne | T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation |
rtson | Typed JSON |
rtsplot | Time Series Plot |
Rttf2pt1 | 'ttf2pt1' Program |
RtutoR | Shiny Apps for Plotting and Exploratory Analysis |
Rtwalk | The R Implementation of the 't-walk' MCMC Algorithm |
rtweet | Collecting Twitter Data |
rtype | A strong type system for R |
rtypeform | Interface to 'typeform' Results |
rubias | Bayesian Inference from the Conditional Genetic Stock Identification Model |
rucm | Implementation of Unobserved Components Model (UCM) |
rucrdtw | R Bindings for the UCR Suite |
rugarch | Univariate GARCH Models |
ruimtehol | Learn Text 'Embeddings' with 'Starspace' |
ruin | Simulation of Various Risk Processes |
ruler | Tidy Data Validation Reports |
rules | Model Wrappers for Rule-Based Models |
rUnemploymentData | Data and Functions for USA State and County Unemployment Data |
runes | Convert Strings to Elder Futhark Runes |
RUnit | R Unit Test Framework |
Runiversal | Runiversal - Package for converting R objects to Java variables and XML |
runjags | Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS |
runner | Running Operations for Vectors |
runonce | Run Once and Save Result |
runstats | Fast Computation of Running Statistics for Time Series |
Runuran | R Interface to the 'UNU.RAN' Random Variate Generators |
rusda | Interface to USDA Databases |
rusk | Beautiful Graphical Representation of Multiplication Tables on a Modular Circle |
rust | Ratio-of-Uniforms Simulation with Transformation |
ruta | Implementation of Unsupervised Neural Architectures |
rutifier | Chilean Rol Unico Tributario |
ruv | Detect and Remove Unwanted Variation using Negative Controls |
rv | Simulation-Based Random Variable Objects |
RVAideMemoire | Testing and Plotting Procedures for Biostatistics |
rvalues | R-Values for Ranking in High-Dimensional Settings |
Rvcg | Manipulations of Triangular Meshes Based on the 'VCGLIB' API |
rvcheck | R/Package Version Check |
RVenn | Set Operations for Many Sets |
RVerbalExpressions | Create Regular Expressions Easily |
rversions | Query 'R' Versions, Including 'r-release' and 'r-oldrel' |
rvertnet | Search 'Vertnet', a 'Database' of Vertebrate Specimen Records |
rvest | Easily Harvest (Scrape) Web Pages |
RVFam | Rare Variants Association Analyses with Family Data |
rvg | R Graphics Devices for Vector Graphics Output |
rvgtest | Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators |
rvHPDT | Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees |
RVideoPoker | Play Video Poker with R |
RViennaCL | 'ViennaCL' C++ Header Files |
rviewgraph | Animated Graph Layout Viewer |
rvinecopulib | High Performance Algorithms for Vine Copula Modeling |
rvkstat | Interface to API 'vk.com' |
rvmethod | Radial Velocity Method for Detecting Exoplanets |
Rvmmin | Variable Metric Nonlinear Function Minimization |
Rvoterdistance | Calculates the Distance Between Voter and Multiple Polling Locations |
RVowpalWabbit | R Interface to the Vowpal Wabbit |
rvTDT | population control weighted rare-variants TDT |
RVtests | Rare Variant Tests |
rwalkr | API to Melbourne Pedestrian Data |
Rwave | Time-Frequency Analysis of 1-D Signals |
rwavelet | Wavelet Analysis |
rWBclimate | A package for accessing World Bank climate data |
RWBP | Detects spatial outliers using a Random Walk on Bipartite Graph |
rwc | Random Walk Covariance Models |
RWDataPlyr | Read and Manipulate Data from 'RiverWare' |
RWebLogo | plotting custom sequence logos |
rwebstat | Download Data from the Webstat API |
RWeka | R/Weka Interface |
RWekajars | R/Weka Interface Jars |
rwfec | R Wireless, Forward Error Correction |
rwhatsapp | Import and Handling for 'WhatsApp' Chat Logs |
Rwhois | WHOIS Server Querying |
RWiener | Wiener Process Distribution Functions |
RWildbook | Interface for the 'Wildbook' Wildlife Data Management Framework |
rWind | Download, Edit and Include Wind and Sea Currents Data in Ecological and Evolutionary Analysis |
RWinEdt | R Interface to 'WinEdt' |
Rwinsteps | Running Winsteps in R |
rWishart | Random Wishart Matrix Generation |
Rwofost | WOFOST Crop Growth Simulation Model |
Rwordseg | Chinese Word Segmentation |
rworldmap | Mapping Global Data |
rworldxtra | Country boundaries at high resolution |
RWsearch | Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One Download |
rwstats | Chinese Character Frequency in Real World |
rwt | Rice Wavelet Toolbox wrapper |
rwty | R We There Yet? Visualizing MCMC Convergence in Phylogenetics |
rwunderground | R Interface to Weather Underground API |
RxCEcolInf | 'R x C Ecological Inference With Optional Incorporation of Survey Information' |
RXKCD | Get XKCD Comic from R |
RXMCDA | Functions to Parse and Create XMCDA Files |
Rxnat | Queries and Extracts Images from Extensible Neuroimaging Archive Toolkit Public/Private Datasets |
RxnSim | Functions to Compute Chemical Reaction Similarity |
RxODE | Facilities for Simulating from ODE-Based Models |
rxSeq | Combined Total and Allele Specific Reads Sequencing Study |
RXshrink | Maximum Likelihood Shrinkage using Generalized Ridge or Least Angle Regression Methods |
rxylib | Import XY-Data into R |
Ryacas | R Interface to the 'Yacas' Computer Algebra System |
Ryacas0 | Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System) |
ryandexdirect | Load Data From 'Yandex Direct' |
RYandexTranslate | R Interface to Yandex Translate API |
rym | R Interface to Yandex Metrica API |
RYoudaoTranslate | R package provide functions to translate English words into Chinese |
ryouready | Companion to the Forthcoming Book - R you Ready? |
rYoutheria | Access to the YouTheria Mammal Trait Database |
rysgran | Grain size analysis, textural classifications and distribution of unconsolidated sediments |
RZabbix | R Module for Working with the 'Zabbix API' |
RZigZag | Zig-Zag Sampler |
rzmq | R Bindings for 'ZeroMQ' |
RZooRoH | Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes |
s2 | Spherical Geometry Operators Using the S2 Geometry Library |
s20x | Functions for University of Auckland Course STATS 201/208 Data Analysis |
s2dv | A Set of Common Tools for Seasonal to Decadal Verification |
s2dverification | Set of Common Tools for Forecast Verification |
s2net | The Generalized Semi-Supervised Elastic-Net |
S2sls | Spatial Two Stage Least Squares Estimation |
s4vd | Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection |
saasCNV | Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data |
sabarsi | Background Removal and Spectrum Identification for SERS Data |
sabre | Spatial Association Between Regionalizations |
sac | Semiparametric Analysis of Changepoint |
saccades | Detection of Fixations in Eye-Tracking Data |
SACCR | SA Counterparty Credit Risk under Basel III |
SACOBRA | Self-Adjusting COBRA |
SADEG | Stability Analysis in Differentially Expressed Genes |
SADISA | Species Abundance Distributions with Independent-Species Assumption |
sadists | Some Additional Distributions |
sads | Maximum Likelihood Models for Species Abundance Distributions |
sae | Small Area Estimation |
saeeb | Small Area Estimation for Count Data |
saeME | Small Area Estimation with Measurement Error |
saemix | Stochastic Approximation Expectation Maximization (SAEM) Algorithm |
saeRobust | Robust Small Area Estimation |
saery | Small Area Estimation for Rao and Yu Model |
saeSim | Simulation Tools for Small Area Estimation |
SAFD | Statistical Analysis of Fuzzy Data |
safeBinaryRegression | Safe Binary Regression |
safedata | Interface to Data from the SAFE Project |
safer | Encrypt and Decrypt Strings, R Objects and Files |
safetyGraphics | Create Interactive Graphics Related to Clinical Trial Safety |
SAGMM | Clustering via Stochastic Approximation and Gaussian Mixture Models |
sAIC | Akaike Information Criterion for Sparse Estimation |
sail | Sparse Additive Interaction Learning |
SailoR | An Extension of the Taylor Diagram to Two-Dimensional Vector Data |
SALES | Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms |
salesforcer | An Implementation of 'Salesforce' APIs Using Tidy Principles |
salso | Sequentially-Allocated Latent Structure Optimization |
SALTSampler | Efficient Sampling on the Simplex |
salty | Turn Clean Data into Messy Data |
SAM | Sparse Additive Modelling |
SAMBA | Selection and Misclassification Bias Adjustment for Logistic Regression Models |
sambia | A Collection of Techniques Correcting for Sample Selection Bias |
samc | Spatial Absorbing Markov Chains |
SAMM | Some Algorithms for Mixed Models |
samon | Sensitivity Analysis for Missing Data |
Sample.Size | Sample size calculation |
sampler | Sample Design, Drawing & Data Analysis Using Data Frames |
SamplerCompare | A Framework for Comparing the Performance of MCMC Samplers |
sampleSelection | Sample Selection Models |
samplesize | Sample Size Calculation for Various t-Tests and Wilcoxon-Test |
SampleSize4ClinicalTrials | Sample Size Calculation for the Comparison of Means or Proportions in Phase III Clinical Trials |
samplesize4surveys | Sample Size Calculations for Complex Surveys |
samplesizeCMH | Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test |
samplesizelogisticcasecontrol | Sample Size Calculations for Case-Control Studies |
SampleSizeMeans | Sample size calculations for normal means |
SampleSizeProportions | Calculating sample size requirements when estimating the difference between two binomial proportions |
sampling | Survey Sampling |
SamplingBigData | Sampling Methods for Big Data |
samplingbook | Survey Sampling Procedures |
samplingDataCRT | Sampling Data Within Different Study Designs for Cluster Randomized Trials |
samplingEstimates | Sampling Estimates |
SamplingStrata | Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys |
samplingVarEst | Sampling Variance Estimation |
sampSurf | Sampling Surface Simulation for Areal Sampling Methods |
samr | SAM: Significance Analysis of Microarrays |
SAMUR | Stochastic Augmentation of Matched Data Using Restriction Methods |
SAMURAI | Sensitivity Analysis of a Meta-analysis with Unpublished but Registered Analytical Investigations |
samurais | Statistical Models for the Unsupervised Segmentation of Time-Series ('SaMUraiS') |
sand | Statistical Analysis of Network Data with R, 2nd Edition |
sandwich | Robust Covariance Matrix Estimators |
SanFranBeachWater | Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data |
sanitizers | C/C++ source code to trigger Address and Undefined Behaviour Sanitizers |
sanityTracker | Keeps Track of all Performed Sanity Checks |
sankey | Illustrate the Flow of Information or Material |
sankeywheel | Create Dependency Wheels and Sankey Diagrams |
sanon | Stratified Analysis with Nonparametric Covariable Adjustment |
santaR | Short Asynchronous Time-Series Analysis |
santoku | A Versatile Cutting Tool |
sanzo | Color Palettes Based on the Works of Sanzo Wada |
sapfluxnetr | Working with 'Sapfluxnet' Project Data |
SAPP | Statistical Analysis of Point Processes |
saqgetr | Import Air Quality Monitoring Data in a Fast and Easy Way |
SAR | Smart Adaptive Recommendations |
sara4r | An R-GUI for Spatial Analysis of Surface Runoff using the NRCS-CN Method |
sarima | Simulation and Prediction with Seasonal ARIMA Models |
SARP.compo | Network-Based Interpretation of Changes in Compositional Data |
SARP.moodle | XML Output Functions for Easy Creation of Moodle Questions |
sarp.snowprofile | Snow Profile Analysis for Snowpack and Avalanche Research |
sars | Fit and Compare Species-Area Relationship Models Using Multimodel Inference |
sarsop | Approximate POMDP Planning Software |
sas7bdat | SAS Database Reader (experimental) |
SAScii | Import ASCII files directly into R using only a SAS input script |
sasLM | 'SAS' Linear Model |
sasMap | Static 'SAS' Code Analysis |
SASmarkdown | 'SAS' Markdown |
SASmixed | Data sets from "SAS System for Mixed Models" |
SASPECT | Significant AnalysiS of PEptide CounTs |
sass | Syntactically Awesome Style Sheets ('Sass') |
SASxport | Read and Write 'SAS' 'XPORT' Files |
sate | Scientific Analysis of Trial Errors (SATE) |
satellite | Handling and Manipulating Remote Sensing Data |
satscanMapper | 'SaTScan' (TM) Results Mapper |
saturnin | Spanning Trees Used for Network Inference |
SAutomata | Inference and Learning in Stochastic Automata |
SAVE | Bayesian Emulation, Calibration and Validation of Computer Models |
SAVER | Single-Cell RNA-Seq Gene Expression Recovery |
saves | Fast load variables |
saws | Small-Sample Adjustments for Wald Tests Using Sandwich Estimators |
sazedR | Parameter-Free Domain-Agnostic Season Length Detection in Time Series |
SBdecomp | Estimation of the Proportion of SB Explained by Confounders |
sBF | Smooth Backfitting |
sbfc | Selective Bayesian Forest Classifier |
sbgcop | Semiparametric Bayesian Gaussian Copula Estimation and Imputation |
sBIC | Computing the Singular BIC for Multiple Models |
sbioPN | sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets |
sbl | Sparse Bayesian Learning for QTL Mapping and Genome-Wide Association Studies |
sbm | Stochastic Blockmodels |
SBmedian | Scalable Bayes with Median of Subset Posteriors |
sbmSDP | Semidefinite Programming for Fitting Block Models of Equal Block Sizes |
SBMSplitMerge | Inference for a Generalised SBM with a Split Merge Sampler |
sboost | Machine Learning with AdaBoost on Decision Stumps |
sbpiper | Data Analysis Functions for 'SBpipe' Package |
SBRect | Detecting structural breaks using rectangle covering (non-parametric method) |
SBSA | Simplified Bayesian Sensitivity Analysis |
SBSDiff | Satorra-Bentler Scaled Chi-Squared Difference Test |
sbtools | USGS ScienceBase Tools |
sbw | Stable Balancing Weights for Causal Inference and Estimation with Incomplete Outcome Data |
scaffolder | Scaffolding Interfaces to Packages in Other Programming Languages |
scagnostics | Compute scagnostics - scatterplot diagnostics |
scaleboot | Approximately Unbiased P-Values via Multiscale Bootstrap |
Scalelink | Create Scale Linkage Scores |
scales | Scale Functions for Visualization |
scalpel | Processes Calcium Imaging Data |
scalreg | Scaled Sparse Linear Regression |
scam | Shape Constrained Additive Models |
scan | Single-Case Data Analyses for Single and Multiple Baseline Designs |
scanstatistics | Space-Time Anomaly Detection using Scan Statistics |
scape | Statistical Catch-at-Age Plotting Environment |
scar | Shape-Constrained Additive Regression: a Maximum Likelihood Approach |
scaRabee | Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models |
SCAT | Summary Based Conditional Association Test |
scatr | Create Scatter Plots with Marginal Density or Box Plots |
scatterD3 | D3 JavaScript Scatterplot from R |
scattermore | Scatterplots with More Points |
scatterpie | Scatter Pie Plot |
scatterplot3d | 3D Scatter Plot |
SCBiclust | Identifies Mean, Variance, and Hierarchically Clustered Biclusters |
scBio | Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data |
SCBmeanfd | Simultaneous Confidence Bands for the Mean of Functional Data |
scbursts | Single Channel Bursts Analysis |
SCCI | Stochastic Complexity-Based Conditional Independence Test for Discrete Data |
scclust | Size-Constrained Clustering |
sccr | The Self-Consistent, Competing Risks (SC-CR) Algorithms |
SCCS | The Self-Controlled Case Series Method |
scdensity | Shape-Constrained Kernel Density Estimation |
scdhlm | Estimating Hierarchical Linear Models for Single-Case Designs |
scDIFtest | Item-Wise Score-Based DIF Detection |
scenario | Construct Reduced Trees with Predefined Nodal Structures |
SCEPtER | Stellar CharactEristics Pisa Estimation gRid |
SCEPtERbinary | Stellar CharactEristics Pisa Estimation gRid for Binary Systems |
SCGLR | Supervised Component Generalized Linear Regression |
scgwr | Scalable Geographically Weighted Regression |
schoenberg | Tools for 12-Tone Musical Composition |
scholar | Analyse Citation Data from Google Scholar |
schoolmath | Functions and datasets for math used in school |
schoRsch | Tools for Analyzing Factorial Experiments |
schrute | The Entire Transcript from the Office in Tidy Format |
schumaker | Schumaker Shape-Preserving Spline |
SCI | Standardized Climate Indices Such as SPI, SRI or SPEI |
scico | Colour Palettes Based on the Scientific Colour-Maps |
scidb | An R Interface to SciDB |
scientoText | Text & Scientometric Analytics |
scifigure | Visualize 'Reproducibility' and 'Replicability' in a Comparison of Scientific Studies |
SCINA | A Semi-Supervised Category Identification and Assignment Tool |
sciplot | Scientific Graphing Functions for Factorial Designs |
scipub | Summarize Data for Scientific Publication |
SciViews | SciViews - Main package |
sclero | Measure Growth Patterns and Align Sampling Spots in Photographs |
scLink | Inferring Functional Gene Co-Expression Networks from Single Cell Data |
sclr | Scaled Logistic Regression |
SCMA | Single-Case Meta-Analysis |
scmamp | Statistical Comparison of Multiple Algorithms in Multiple Problems |
scMappR | Single Cell Mapper |
scModels | Fitting Discrete Distribution Models to Count Data |
scoper | Spectral Clustering-Based Method for Identifying B Cell Clones |
scopr | Read Ethoscope Data |
SCOR | Spherically Constrained Optimization Routine |
score | A Package to Score Behavioral Questionnaires |
scorecard | Credit Risk Scorecard |
scorecardModelUtils | Credit Scorecard Modelling Utils |
ScoreGGUM | Score Persons Using the Generalized Graded Unfolding Model |
scorepeak | Peak Functions for Peak Detection in Univariate Time Series |
ScorePlus | Implementation of SCORE, SCORE+ and Mixed-SCORE |
SCORER2 | SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences |
scoring | Proper Scoring Rules |
scoringRules | Scoring Rules for Parametric and Simulated Distribution Forecasts |
scoringutils | Utilities for Scoring and Assessing Predictions |
SCORPIUS | Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data |
ScottKnott | The ScottKnott Clustering Algorithm |
ScottKnottESD | The Scott-Knott Effect Size Difference (ESD) Test |
scout | Implements the Scout Method for Covariance-Regularized Regression |
SCOUTer | Simulate Controlled Outliers |
scPDSI | Calculation of the Conventional and Self-Calibrating Palmer Drought Severity Index |
SCperf | Functions for Planning and Managing Inventories in a Supply Chain |
scpm | An R Package for Spatial Smoothing |
SCPME | Shrinking Characteristics of Precision Matrix Estimators |
ScrabbleScore | Calculates Scrabble score for strings |
scraEP | Scrape European Parliament Careers |
scrapeR | Tools for Scraping Data from HTML and XML Documents |
ScreenClean | Screen and clean variable selection procedures |
scrime | Analysis of High-Dimensional Categorical Data Such as SNP Data |
scriptests | Transcript-Based Unit Tests that are Easy to Create and Maintain |
scriptexec | Execute Native Scripts |
scriptName | Determine a Script's Filename from Within the Script Itself |
scriptuRs | Complete Text of the LDS Scriptures |
scrm | Simulating the Evolution of Biological Sequences |
scRNAtools | Single Cell RNA Sequencing Data Analysis Tools |
scrobbler | Download 'Scrobbles' from 'Last.fm' |
scrollrevealR | Animate 'shiny' Elements when They Scroll into View using the 'scrollrevealjs' Library |
SCRSELECT | Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model |
SCRT | Single-Case Randomization Tests |
scrubr | Clean Biological Occurrence Records |
scrypt | Key Derivation Functions for R Based on Scrypt |
scs | Splitting Conic Solver |
scTenifoldNet | Construct and Compare scGRN from Single-Cell Transcriptomic Data |
SCtools | Extensions for Synthetic Controls Analysis |
sctransform | Variance Stabilizing Transformations for Single Cell UMI Data |
scuba | Diving Calculations and Decompression Models |
scUtils | Utility Functions for Single-Cell RNA Sequencing Data |
SCVA | Single-Case Visual Analysis |
sda | Shrinkage Discriminant Analysis and CAT Score Variable Selection |
SDaA | Sampling: Design and Analysis |
sdafilter | Symmetrized Data Aggregation |
SDALGCP | Spatially Discrete Approximation to Log-Gaussian Cox Processes for Aggregated Disease Count Data |
SDAR | Stratigraphic Data Analysis |
sdat | Signal Detection via Adaptive Test |
sdcHierarchies | Create and (Interactively) Modify Nested Hierarchies |
sdcMicro | Statistical Disclosure Control Methods for Anonymization of Data and Risk Estimation |
sdcSpatial | Statistical Disclosure Control for Spatial Data |
sdcTable | Methods for Statistical Disclosure Control in Tabular Data |
sdcTarget | Statistical Disclosure Control Substitution Matrix Calculator |
SDD | Serial Dependence Diagrams |
SDDE | Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks |
sddpack | Semidiscrete Decomposition |
sde | Simulation and Inference for Stochastic Differential Equations |
sdef | Synthesizing List of Differentially Expressed Features |
SDEFSR | Subgroup Discovery with Evolutionary Fuzzy Systems |
sdglinkage | Synthetic Data Generation for Linkage Methods Development |
SDLfilter | Filtering and Assessing the Sample Size of Tracking Data |
sdm | Species Distribution Modelling |
SDMPlay | Species Distribution Modelling Playground |
sdmpredictors | Species Distribution Modelling Predictor Datasets |
SDMtune | Species Distribution Model Selection |
sdmvspecies | Create Virtual Species for Species Distribution Modelling |
sdols | Summarizing Distributions of Latent Structures |
sdPrior | Scale-Dependent Hyperpriors in Structured Additive Distributional Regression |
sdprisk | Measures of Risk for the Compound Poisson Risk Process with Diffusion |
sdpt3r | Semi-Definite Quadratic Linear Programming Solver |
SDraw | Spatially Balanced Samples of Spatial Objects |
sdStaf | Species Distribution and Stability Future Models |
SDT | Self-Determination Theory Measures |
sdtoolkit | Scenario Discovery Tools to Support Robust Decision Making |
SEA | Segregation Analysis |
seacarb | Seawater Carbonate Chemistry |
seagull | Lasso, Group Lasso, and Sparse-Group Lasso for Mixed Models |
sealasso | Standard Error Adjusted Adaptive Lasso |
searchable | Tools for Custom Searches / Subsets / Slices of Named R Objects |
searchConsoleR | Google Search Console R Client |
searcher | Query Search Interfaces |
SearchTrees | Spatial Search Trees |
seas | Seasonal Analysis and Graphics, Especially for Climatology |
SEAsic | Score Equity Assessment- summary index computation |
season | Seasonal Analysis of Health Data |
seasonal | R Interface to X-13-ARIMA-SEATS |
seasonalview | Graphical User Interface for Seasonal Adjustment |
seastests | Seasonality Tests |
seawaveQ | SEAWAVE-Q Model |
SECFISH | Disaggregate Variable Costs |
SEchart | SEchart |
SecKW | The SecKW Distribution |
SECP | Statistical Estimation of Cluster Parameters (SECP) |
secr | Spatially Explicit Capture-Recapture |
secrdesign | Sampling Design for Spatially Explicit Capture-Recapture |
secret | Share Sensitive Information in R Packages |
secrettext | Encrypt Text Using a Shifting Substitution Cipher |
secrlinear | Spatially Explicit Capture-Recapture for Linear Habitats |
secsse | Several Examined and Concealed States-Dependent Speciation and Extinction |
secure | Sequential Co-Sparse Factor Regression |
securitytxt | Identify and Parse Web Security Policies Files |
secuTrialR | Handling of Data from the Clinical Data Management System 'secuTrial' |
see | Visualisation Toolbox for 'easystats' and Extra Geoms, Themes and Color Palettes for 'ggplot2' |
seeclickfixr | Access Data from the SeeClickFix Web API |
SeedCalc | Seed Germination and Seedling Growth Indexes |
seedCCA | Seeded Canonical Correlation Analysis |
seeds | Estimate Hidden Inputs using the Dynamic Elastic Net |
seedwater | Models for Drying and Soaking Kinetics of Seeds |
seer | Feature-Based Forecast Model Selection |
SEER2R | reading and writing SEER*STAT data files |
SEERaBomb | SEER and Atomic Bomb Survivor Data Analysis Tools |
SeerMapper | A Quick Way to Map U.S. Rates and Data of U.S. States, Counties, Census Tracts, or Seer Registries using 2000 and 2010 U.S. Census Boundaries |
SeerMapper2010East | Supplemental U.S. 2010 Census Tract Boundaries for 20 Eastern States (including DC and PR) without Registries for 'SeerMapper' |
SeerMapper2010Regs | Supplemental U.S. 2010 Census Tract Boundaries for 19 States with Seer Registries for 'SeerMapper' |
SeerMapper2010West | Supplemental U.S. 2010 Census Tract Boundaries for 13 Western States without Seer Registries for 'SeerMapper' |
SeerMapperEast | Supplemental U.S. 2000 Census Tract Boundaries for 20 States, District and Territory without Seer Registries that are East of the Mississippi River for Use with 'SeerMapper' Package |
SeerMapperRegs | Supplemental U.S. 2000 Census Tract Boundaries for 19 States with Seer Registries for 'SeerMapper' |
SeerMapperWest | Supplemental U.S. 2000 Census Tract Boundaries for 13 Western States without Seer Registries for 'SeerMapper' |
seewave | Sound Analysis and Synthesis |
seg | Measuring Spatial Segregation |
segclust2d | Bivariate Segmentation/Clustering Methods and Tools |
SegCorr | Detecting Correlated Genomic Regions |
SegEnvIneq | Environmental Inequality Indices Based on Segregation Measures |
segmag | Determine Event Boundaries in Event Segmentation Experiments |
segmented | Regression Models with Break-Points / Change-Points Estimation |
segmenTier | Similarity-Based Segmentation of Multidimensional Signals |
segmentr | Segment Data With Maximum Likelihood |
segMGarch | Multiple Change-Point Detection for High-Dimensional GARCH Processes |
segRDA | Modeling Non-Continuous Linear Responses of Ecological Data |
segregation | Entropy-Based Segregation Indices |
seismic | Predict Information Cascade by Self-Exciting Point Process |
seismicRoll | Fast Rolling Functions for Seismology using 'Rcpp' |
sejmRP | An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office |
Sejong | KoNLP static dictionaries and Sejong project resources |
SEL | Semiparametric elicitation |
selac | Selection Models for Amino Acid and/or Codon Evolution |
Select | Determines Species Probabilities Based on Functional Traits |
selectapref | Analysis of Field and Laboratory Foraging |
SelectBoost | A General Algorithm to Enhance the Performance of Variable Selection Methods in Correlated Datasets |
selectiongain | A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection |
selectiveInference | Tools for Post-Selection Inference |
selectMeta | Estimation of Weight Functions in Meta Analysis |
selectr | Translate CSS Selectors to XPath Expressions |
selectspm | Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit |
SeleMix | Selective Editing via Mixture Models |
seleniumPipes | R Client Implementing the W3C WebDriver Specification |
SELF | A Structural Equation Embedded Likelihood Framework for Causal Discovery |
selfea | Select Features Reliably with Cohen's Effect Sizes |
selfingTree | Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing |
SelvarMix | Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis |
sem | Structural Equation Models |
semantic.dashboard | Dashboard with Semantic UI Support for Shiny |
Semblance | A Data-Driven Similarity Kernel on Probability Spaces |
semdiag | Structural equation modeling diagnostics |
semdrw | 'SEM Shiny' |
semds | Structural Equation Multidimensional Scaling |
semEff | Automatic Calculation of Effects for Piecewise Structural Equation Models |
semiArtificial | Generator of Semi-Artificial Data |
SemiCompRisks | Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data |
SEMID | Identifiability of Linear Structural Equation Models |
SemiMarkov | Multi-States Semi-Markov Models |
seminr | Domain-Specific Language for Building and Estimating Structural Equation Models |
SemiPar | Semiparametic Regression |
SEMModComp | Model Comparisons for SEM |
semnar | Constructing and Interacting with Databases of Presentations |
SemNeT | Methods and Measures for Semantic Network Analysis |
SemNetCleaner | An Automated Cleaning Tool for Semantic and Linguistic Data |
SemNetDictionaries | Dictionaries for the 'SemNetCleaner' Package |
semnova | Latent Repeated Measures ANOVA |
semPlot | Path Diagrams and Visual Analysis of Various SEM Packages' Output |
semPLS | Structural Equation Modeling Using Partial Least Squares |
semPower | Power Analyses for SEM |
SEMrushR | R Interface to Access the 'SEMrush' API |
SEMsens | A Tool for Sensitivity Analysis in Structural Equation Modeling |
semsfa | Semiparametric Estimation of Stochastic Frontier Models |
semTable | Structural Equation Modeling Tables |
semTools | Useful Tools for Structural Equation Modeling |
semtree | Recursive Partitioning for Structural Equation Models |
semver | 'Semantic Versioning V2.0.0' Parser |
semverutils | Semantic Version Utilities |
sen2r | Find, Download and Process Sentinel-2 Data |
sendmailR | send email using R |
sendplot | Tool for sending interactive plots with tool-tip content |
sensemakr | Sensitivity Analysis Tools for Regression Models |
sensibo.sky | Access to 'Sensibo Sky' API V2 for Air Conditioners Remote Control |
sensiPhy | Sensitivity Analysis for Comparative Methods |
sensitivity | Global Sensitivity Analysis of Model Outputs |
sensitivity2x2xk | Sensitivity Analysis for 2x2xk Tables in Observational Studies |
sensitivityCalibration | A Calibrated Sensitivity Analysis for Matched Observational Studies |
SensitivityCaseControl | Sensitivity Analysis for Case-Control Studies |
sensitivityfull | Sensitivity Analysis for Full Matching in Observational Studies |
sensitivitymult | Sensitivity Analysis for Observational Studies with Multiple Outcomes |
sensitivitymv | Sensitivity Analysis in Observational Studies |
sensitivitymw | Sensitivity analysis using weighted M-statistics |
sensitivityPStrat | Principal Stratification Sensitivity Analysis Functions |
sensmediation | Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects |
sensobol | Computation of High-Order Sobol' Sensitivity Indices |
SensoMineR | Sensory Data Analysis |
sensory | Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm |
sensR | Thurstonian Models for Sensory Discrimination |
SenSrivastava | Datasets from Sen & Srivastava |
senstrat | Sensitivity Analysis for Stratified Observational Studies |
SensusR | Sensus Analytics |
sentencepiece | Text Tokenization using Byte Pair Encoding and Unigram Modelling |
SentimentAnalysis | Dictionary-Based Sentiment Analysis |
sentimentr | Calculate Text Polarity Sentiment |
sentometrics | An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction |
sentryR | Send Errors and Messages to 'Sentry' |
separationplot | Separation Plots |
seplyr | Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks |
SeqAlloc | Sequential Allocation for Prospective Experiments |
seqCBS | Copy Number Profiling using Sequencing and CBS |
seqDesign | Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints |
SeqDetect | Sequence and Latent Process Detector |
seqest | Sequential Method for Classification and Generalized Estimating Equations Problem |
SeqFeatR | A Tool to Associate FASTA Sequences and Features |
seqgendiff | RNA-Seq Generation/Modification for Simulation |
seqhandbook | Miscellaneous Tools for Sequence Analysis |
seqHMM | Mixture Hidden Markov Models for Social Sequence Data and Other Multivariate, Multichannel Categorical Time Series |
seqICP | Sequential Invariant Causal Prediction |
seqinr | Biological Sequences Retrieval and Analysis |
SeqKat | Detection of Kataegis |
SeqMADE | Network Module-Based Model in the Differential Expression Analysis for RNA-Seq |
seqmagick | Sequence Manipulation Utilities |
seqminer | Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
seqmon | Group Sequential Design Class for Clinical Trials |
SeqNet | Generate RNA-Seq Data from Gene-Gene Association Networks |
seqRFLP | Simulation and visualization of restriction enzyme cutting pattern from DNA sequences |
seqtest | Sequential Triangular Test |
sequence | Analysis of Sequences of Events |
sequences | Generic and Biological Sequences |
SequenceSpikeSlab | Exact Bayesian Model Selection Methods for the Sparse Normal Sequence Model |
Sequential | Exact Sequential Analysis for Poisson and Binomial Data |
SequentialDesign | Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data |
sequenza | Copy Number Estimation from Tumor Genome Sequencing Data |
sequoia | Pedigree Inference from SNPs |
sergeant | Tools to Transform and Query Data with Apache Drill |
serial | The Serial Interface Package |
seriation | Infrastructure for Ordering Objects Using Seriation |
serieslcb | Lower Confidence Bounds for Binomial Series System |
seroincidence | Estimating Infection Rates from Serological Data |
serpstatr | 'Serpstat' API Wrapper |
serrsBayes | Bayesian Modelling of Raman Spectroscopy |
servosphereR | Analyze Data Generated from Syntech Servosphere Trials |
servr | A Simple HTTP Server to Serve Static Files or Dynamic Documents |
sesem | Spatially Explicit Structural Equation Modeling |
session | Functions for interacting with, saving and restoring R sessions |
sessioninfo | R Session Information |
set | Set Operation |
set6 | R6 Mathematical Sets Interface |
SetMethods | Functions for Set-Theoretic Multi-Method Research and Advanced QCA |
SETPath | Spiked Eigenvalue Test for Pathway data |
SetRank | Advanced Gene Set Enrichment Analysis |
setRNG | Set (Normal) Random Number Generator and Seed |
sets | Sets, Generalized Sets, Customizable Sets and Intervals |
setter | Mutators that Work with Pipes |
SetTest | Group Testing Procedures for Signal Detection and Goodness-of-Fit |
settings | Software Option Settings Manager for R |
Seurat | Tools for Single Cell Genomics |
sever | Customise 'Shiny' Disconnected Screens and Error Messages |
severity | Mayo's Post-data Severity Evaluation |
sf | Simple Features for R |
sfa | Stochastic Frontier Analysis |
sfadv | Advanced Methods for Stochastic Frontier Analysis |
sfc | Substance Flow Computation |
sfdct | Constrained Triangulation for Simple Features |
sFFLHD | Sequential Full Factorial-Based Latin Hypercube Design |
sfheaders | Converts Between R Objects and Simple Feature Objects |
sfinx | Straightforward Filtering Index for AP-MS Data Analysis (SFINX) |
SFS | Similarity-First Search Seriation Algorithm |
sfsmisc | Utilities from 'Seminar fuer Statistik' ETH Zurich |
sft | Functions for Systems Factorial Technology Analysis of Data |
SFtools | Space Filling Based Tools for Data Mining |
SGB | Simplicial Generalized Beta Regression |
SGCS | Spatial Graph Based Clustering Summaries for Spatial Point Patterns |
sgd | Stochastic Gradient Descent for Scalable Estimation |
sgee | Stagewise Generalized Estimating Equations |
sgeostat | An Object-Oriented Framework for Geostatistical Modeling in S+ |
SGL | Fit a GLM (or Cox Model) with a Combination of Lasso and Group Lasso Regularization |
sglasso | Lasso Method for RCON(V,E) Models |
sglg | Fitting Semi-Parametric Generalized log-Gamma Regression Models |
sglOptim | Generic Sparse Group Lasso Solver |
sglr | An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test |
sgmcmc | Stochastic Gradient Markov Chain Monte Carlo |
sgmodel | Solves a Generic Stochastic Growth Model with a Representative Agent |
sGMRFmix | Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection |
sgof | Multiple Hypothesis Testing |
SGP | Student Growth Percentiles & Percentile Growth Trajectories |
SGPdata | Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses |
sgPLS | Sparse Group Partial Least Square Methods |
sgpv | Calculate Second-Generation p-Values and Associated Measures |
sgr | Sample Generation by Replacement |
sgt | Skewed Generalized T Distribution Tree |
shades | Simple Colour Manipulation |
shadow | Geometric Shadow Calculations |
shadowtext | Shadow Text Grob and Layer |
shallot | Random Partition Distribution Indexed by Pairwise Information |
shape | Functions for Plotting Graphical Shapes, Colors |
ShapeChange | Change-Point Estimation using Shape-Restricted Splines |
shapefiles | Read and Write ESRI Shapefiles |
ShapePattern | Tools for Analyzing Shapes and Patterns |
shapeR | Collection and Analysis of Otolith Shape Data |
ShapeRotator | Standardised Rigid Rotations of Articulated Three-Dimensional Structures |
shapes | Statistical Shape Analysis |
ShapeSelectForest | Shape Selection for Landsat Time Series of Forest Dynamics |
SHAPforxgboost | SHAP Plots for 'XGBoost' |
shapper | Wrapper of Python Library 'shap' |
shar | Species-Habitat Associations |
sharpData | Data Sharpening |
SharpeR | Statistical Significance of the Sharpe Ratio |
sharpeRratio | Moment-Free Estimation of Sharpe Ratios |
sharpr2 | Estimating Regulatory Scores and Identifying ATAC-STARR Data |
sharpshootR | A Soil Survey Toolkit |
sharx | Models and Data Sets for the Study of Species-Area Relationships |
shazam | Immunoglobulin Somatic Hypermutation Analysis |
SHELF | Tools to Support the Sheffield Elicitation Framework |
shelltrace | Bivalve Growth and Trace Element Accumulation Model |
ShiftConvolvePoibin | Exactly Computing the Tail of the Poisson-Binomial Distribution |
shiftR | Fast Enrichment Analysis via Circular Permutations |
ShiftShareSE | Inference in Regressions with Shift-Share Structure |
shinipsum | Lorem-Ipsum Helper Function for 'shiny' Prototyping |
shiny | Web Application Framework for R |
shiny.i18n | Shiny Applications Internationalization |
shiny.info | 'shiny' Info |
shiny.router | Basic Routing for Shiny Web Applications |
shiny.semantic | Semantic UI Support for Shiny |
shinyAce | Ace Editor Bindings for Shiny |
shinyaframe | 'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame' |
shinyalert | Easily Create Pretty Popup Messages (Modals) in 'Shiny' |
shinyanimate | Animation for 'shiny' Elements |
shinybootstrap2 | Bootstrap 2 Web Components for Use with Shiny |
shinybrms | Graphical User Interface ('Shiny' App) for Package 'brms' |
shinyBS | Twitter Bootstrap Components for Shiny |
shinybusy | Busy Indicator for 'Shiny' Applications |
shinycssloaders | Add Loading Animations to a 'shiny' Output While It's Recalculating |
shinycustomloader | Custom Loader for Shiny Outputs |
shinyCyJS | Create Interactive Network Visualizations in R and 'shiny' |
shinydashboard | Create Dashboards with 'Shiny' |
shinydashboardPlus | Add More 'AdminLTE2' Components to 'shinydashboard' |
shinydisconnect | Show a Nice Message When a 'Shiny' App Disconnects or Errors |
shinyDND | Shiny Drag-n-Drop |
shinyEffects | Customize Your Web Apps with Fancy Effects |
shinyEventLogger | Logging Events in Shiny Apps |
shinyFeedback | Display User Feedback in Shiny Apps |
shinyFiles | A Server-Side File System Viewer for Shiny |
shinyglide | Glide Component for Shiny Applications |
shinyHeatmaply | Deploy 'heatmaply' using 'shiny' |
shinyhelper | Easily Add Markdown Help Files to 'shiny' App Elements |
shinyhttr | Progress Bars for Downloads in 'shiny' Apps |
ShinyImage | Image Manipulation, with an Emphasis on Journaling |
ShinyItemAnalysis | Test and Item Analysis via Shiny |
shinyjqui | 'jQuery UI' Interactions and Effects for Shiny |
shinyjs | Easily Improve the User Experience of Your Shiny Apps in Seconds |
shinyKGode | An Interactive Application for ODE Parameter Inference Using Gradient Matching |
shinyKnobs | A Collection of Knob Inputs for 'shiny' |
shinyloadtest | Load Test Shiny Applications |
shinylogs | Record Everything that Happens in a 'Shiny' Application |
shinyLP | Bootstrap Landing Home Pages for Shiny Applications |
shinymanager | Authentication Management for 'Shiny' Applications |
shinymaterial | Implement Material Design in Shiny Applications |
shinyMatrix | Shiny Matrix Input Field |
shinyML | Compare H20 or Spark Supervised Regression Models Using Shiny App |
shinyMobile | Mobile Ready 'shiny' Apps with Standalone Capabilities |
shinyMolBio | Molecular Biology Visualization Tools for 'Shiny' Apps |
shinyNotes | Shiny Module for Taking Free-Form Notes |
shinyobjects | Access Reactive Data Interactively |
shinypanels | Shiny Layout with Collapsible Panels |
shinyr | Data Insights Through Inbuilt R Shiny App |
shinyrecap | Shiny User Interface for Multiple Source Capture Recapture Models |
shinyrecipes | Gadget to Use the Data Preprocessing 'recipes' Package Interactively |
shinyreforms | Add Forms to your 'Shiny' App |
shinyRGL | Shiny Wrappers for RGL |
shinySearchbar | Shiny Searchbar - An Input Widget for Highlighting Text and More |
shinyservicebot | Servicebot 'Shiny' Integration |
shinyShortcut | Creates an Executable Shortcut for Shiny Applications |
shinySIR | Interactive Plotting for Mathematical Models of Infectious Disease Spread |
shinystan | Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models |
shinytest | Test Shiny Apps |
ShinyTester | Functions to Minimize Bonehead Moves While Working with 'shiny' |
shinythemes | Themes for Shiny |
shinyTime | A Time Input Widget for Shiny |
shinytoastr | Notifications from 'Shiny' |
shinyTree | jsTree Bindings for Shiny |
shinyWidgets | Custom Inputs Widgets for Shiny |
shinyypr | Run Ypr Shiny App |
SHIP | SHrinkage covariance Incorporating Prior knowledge |
shipunov | Miscellaneous Functions from Alexey Shipunov |
shock | Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models |
shopifyr | An R Interface to the Shopify API |
shortcuts | Useful Shortcuts to Interact with 'RStudio' Scripts |
ShortForm | Automatic Short Form Creation |
shorts | Short Sprints |
shotGroups | Analyze Shot Group Data |
showimage | Show an Image on an 'R' Graphics Device |
showtext | Using Fonts More Easily in R Graphs |
showtextdb | Font Files for the 'showtext' Package |
shp2graph | Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object |
shrink | Global, Parameterwise and Joint Shrinkage Factor Estimation |
ShrinkCovMat | Shrinkage Covariance Matrix Estimators |
shrinkTVP | Efficient Bayesian Inference for Time-Varying Parameter Models with Shrinkage |
SHT | Statistical Hypothesis Testing Toolbox |
shuffle | The Shuffle Estimator for Explainable Variance |
shuffleCI | Confidence Intervals Compared via Shuffling |
shutterstock | Access 'Shutterstock' REST API |
SI | Stochastic Integrating |
siar | Stable Isotope Analysis in R |
SIBER | Stable Isotope Bayesian Ellipses in R |
SIBERG | Systematic Identification of Bimodally Expressed Genes Using RNAseq Data |
sicegar | Analysis of Single-Cell Viral Growth Curves |
SID | Structural Intervention Distance |
sideChannelAttack | Side Channel Attack |
SIDES | Subgroup Identification Based on Differential Effect Search |
sidier | Substitution and Indel Distances to Infer Evolutionary Relationships |
sidrar | An Interface to IBGE's SIDRA API |
siebanxicor | Query Data Series from Bank of Mexico |
SiER | Signal Extraction Approach for Sparse Multivariate Response Regression |
sievePH | Sieve Analysis Methods for Proportional Hazards Models |
sievetest | Laboratory Sieve Test Reporting Functions |
SIfEK | Statistical Inference for Enzyme Kinetics |
sig | Print Function Signatures |
sigclust | Statistical Significance of Clustering |
SightabilityModel | Wildlife Sightability Modeling |
sigInt | Estimate the Parameters of a Discrete Crisis-Bargaining Game |
sigmajs | Interface to 'Sigma.js' Graph Visualization Library |
sigmaNet | Render Graphs Using 'Sigma.js' |
sigminer | Extract, Analyze and Visualize Signatures for Genomic Variations |
sigmoid | Sigmoid Functions for Machine Learning |
SIGN | Similarity Identification in Gene Expression |
Signac | Analysis of Single-Cell Chromatin Data |
signal | Signal Processing |
signalHsmm | Predict Presence of Signal Peptides |
SignifReg | Consistent Significance Controlled Variable Selection in Linear Regression |
signmedian.test | Perform Exact Sign Test and Asymptotic Sign Test in Large Samples |
signnet | Methods to Analyse Signed Networks |
signs | Insert Proper Minus Signs |
SigOptR | R API Wrapper for SigOpt |
sigora | Signature Overrepresentation Analysis |
sigQC | Quality Control Metrics for Gene Signatures |
sigr | Succinct and Correct Statistical Summaries for Reports |
SigTree | Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree |
SII | Calculate ANSI S3.5-1997 Speech Intelligibility Index |
siland | Spatial Influence of Landscape |
SILGGM | Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks |
silicate | Common Forms for Complex Hierarchical and Relational Data Structures |
SILM | Simultaneous Inference for Linear Models |
Sim.DiffProc | Simulation of Diffusion Processes |
Sim.PLFN | Simulation of Piecewise Linear Fuzzy Numbers |
sim1000G | Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes |
sim2Dpredictr | Simulate Outcomes Using Spatially Dependent Design Matrices |
simba | A Collection of functions for similarity analysis of vegetation data |
SimBIID | Simulation-Based Inference Methods for Infectious Disease Models |
simboot | Simultaneous Inference for Diversity Indices |
simcdm | Simulate Cognitive Diagnostic Model ('CDM') Data |
SimComp | Simultaneous Comparisons for Multiple Endpoints |
SimCop | Simulate from Arbitrary Copulae |
SimCorMultRes | Simulates Correlated Multinomial Responses |
SimCorrMix | Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions |
simctest | Safe Implementation of Monte Carlo Tests |
SimDesign | Structure for Organizing Monte Carlo Simulation Designs |
SimDissolution | Modeling and Assessing Similarity of Drug Dissolutions Profiles |
simdistr | Assessment of Data Trial Distributions According to the Carlisle-Stouffer Method |
simecol | Simulation of Ecological (and Other) Dynamic Systems |
simEd | Simulation Education |
simest | Constrained Single Index Model Estimation |
SimEUCartelLaw | Simulation of Legal Exemption System for European Cartel Law |
simex | SIMEX- And MCSIMEX-Algorithm for Measurement Error Models |
simexaft | simexaft |
simExam | Generate Simulated Data for IRT-Enabled Exams |
simfinR | Import Financial Data from the 'SimFin' Project |
simFrame | Simulation framework |
simglm | Simulate Models Based on the Generalized Linear Model |
SimHaz | Simulated Survival and Hazard Analysis for Time-Dependent Exposure |
simhelpers | Helper Functions for Simulation Studies |
SimilaR | R Source Code Similarity Evaluation |
SimilarityMeasures | Trajectory Similarity Measures |
Simile | Interact with Simile Models |
SimInf | A Framework for Data-Driven Stochastic Disease Spread Simulations |
simIReff | Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores |
simITS | Analysis via Simulation of Interrupted Time Series (ITS) Data |
SimJoint | Simulate Joint Distribution |
simLife | Simulation of Fatigue Lifetimes |
simmer | Discrete-Event Simulation for R |
simmer.bricks | Helper Methods for 'simmer' Trajectories |
simmer.plot | Plotting Methods for 'simmer' |
simml | Single-Index Models with Multiple-Links |
simMP | Simulate Somatic Mutations in Cancer Genomes from Mutational Processes |
simmr | A Stable Isotope Mixing Model |
SIMMS | Subnetwork Integration for Multi-Modal Signatures |
simMSM | Simulation of Event Histories for Multi-State Models |
SimMultiCorrData | Simulation of Correlated Data with Multiple Variable Types |
simode | Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching |
simone | Statistical Inference for MOdular NEtworks (SIMoNe) |
simPATHy | A Method for Simulating Data from Perturbed Biological Pathways |
simPH | Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models |
SimPhe | Tools to Simulate Phenotype(s) with Epistatic Interaction |
simpleboot | Simple Bootstrap Routines |
simpleCache | Simply Caching R Objects |
simplecolors | Access Color Names Using a Standardized Nomenclature |
simplegraph | Simple Graph Data Types and Basic Algorithms |
simpleNeural | An Easy to Use Multilayer Perceptron |
simplePHENOTYPES | Simulation of Pleiotropic, Linked and Epistatic Phenotypes |
simpleRCache | Simple R Cache |
simpleSetup | Set Up R Source Code Files for Use on Multiple Machines |
SimpleTable | Bayesian Inference and Sensitivity Analysis for Causal Effects from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured Confounding |
simplevis | Simple Visualisation with 'ggplot2' and 'leaflet' Wrappers |
simplexreg | Regression Analysis of Proportional Data Using Simplex Distribution |
SimplicialCubature | Integration of Functions Over Simplices |
SimplifyStats | Simplifies Pairwise Statistical Analyses |
simPop | Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information |
Simpsons | Detecting Simpson's Paradox |
simputation | Simple Imputation |
simr | Power Analysis for Generalised Linear Mixed Models by Simulation |
SimRAD | Simulations to Predict the Number of RAD and GBS Loci |
SimReg | Similarity Regression |
simrel | Simulation of Multivariate Linear Model Data |
SiMRiv | Simulating Multistate Movements in River/Heterogeneous Landscapes |
SimRVPedigree | Simulate Pedigrees Ascertained for a Rare Disease |
SimRVSequences | Simulate Genetic Sequence Data for Pedigrees |
simsalapar | Tools for Simulation Studies in Parallel |
SimSCRPiecewise | 'Simulates Univariate and Semi-Competing Risks Data Given Covariates and Piecewise Exponential Baseline Hazards' |
simsem | SIMulated Structural Equation Modeling |
SimSeq | Nonparametric Simulation of RNA-Seq Data |
simsl | Single-Index Models with a Surface-Link |
simstandard | Generate Standardized Data |
simstudy | Simulation of Study Data |
simSummary | Simulation summary |
simsurv | Simulate Survival Data |
simTargetCov | Data Transformation or Simulation with Empirical Covariance Matrix |
simtimer | Datetimes as Integers for Discrete-Event Simulations |
SimTimeVar | Simulate Longitudinal Dataset with Time-Varying Correlated Covariates |
simTool | Conduct Simulation Studies with a Minimal Amount of Source Code |
simts | Time Series Analysis Tools |
simukde | Simulation with Kernel Density Estimation |
simulator | An Engine for Running Simulations |
simule | A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models |
SimVitD | Simulation Tools for Planning Vitamin D Studies |
SIN | A SINful Approach to Selection of Gaussian Graphical Markov Models |
sinaplot | An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes |
sindyr | Sparse Identification of Nonlinear Dynamics |
sinew | Create 'roxygen2' Skeleton with Information from Function Script |
SingleCaseES | A Calculator for Single-Case Effect Sizes |
singleCellHaystack | Finding Needles (=differentially Expressed Genes) in Haystacks (=single Cell Data) |
sinib | Sum of Independent Non-Identical Binomial Random Variables |
SinIW | The SinIW Distribution |
sinx | Sino Xmen Said |
siplab | Spatial Individual-Plant Modelling |
sirad | Functions for Calculating Daily Solar Radiation and Evapotranspiration |
SIRE | Finding Feedback Effects in SEM and Testing for Their Significance |
sirt | Supplementary Item Response Theory Models |
sirus | Stable and Interpretable RUle Set |
SIS | Sure Independence Screening |
sisal | Sequential Input Selection Algorithm |
SISIR | Sparse Interval Sliced Inverse Regression |
sismonr | Simulation of in Silico Multi-Omic Networks |
sistec | Tools to Analyze 'Sistec' Datasets |
sisVIVE | Some Invalid Some Valid Instrumental Variables Estimator |
sitar | Super Imposition by Translation and Rotation Growth Curve Analysis |
SiteAdapt | Site Adaptation of Solar Irradiance Modeled Series |
SitesInterest | Inferring an Animal's Sites of Interest from High Resolution Data |
siteymlgen | Automatically Generate _site.yml File for 'R Markdown' |
SITH | A Spatial Model of Intra-Tumor Heterogeneity |
sitmo | Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files |
sitools | Format a number to a string with SI prefix |
sitree | Single Tree Simulator |
sitreeE | Sitree Extensions |
SixSigma | Six Sigma Tools for Quality Control and Improvement |
SizeEstimation | Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model |
sizeMat | Estimate Size at Sexual Maturity |
SiZer | Significant Zero Crossings |
sjdbc | JDBC Driver Interface |
sjlabelled | Labelled Data Utility Functions |
sjmisc | Data and Variable Transformation Functions |
sjPlot | Data Visualization for Statistics in Social Science |
sjstats | Collection of Convenient Functions for Common Statistical Computations |
SK | Segment-Based Ordinary Kriging and Segment-Based Regression Kriging for Spatial Prediction |
SKAT | SNP-Set (Sequence) Kernel Association Test |
skda | Sparse (Multicategory) Kernel Discriminant Analysis |
skedastic | Heteroskedasticity Diagnostics for Linear Regression Models |
skeletor | An R Package Skeleton Generator |
skellam | Densities and Sampling for the Skellam Distribution |
sketcher | Pencil Sketch Effect |
SkewHyperbolic | The Skew Hyperbolic Student t-Distribution |
skewlmm | Scale Mixture of Skew-Normal Linear Mixed Models |
skewt | The Skewed Student-t Distribution |
Skillings.Mack | The Skillings-Mack Test Statistic for Block Designs with Missing Observations |
skimr | Compact and Flexible Summaries of Data |
sklarsomega | Measuring Agreement Using Sklar's Omega Coefficient |
skm | Selective k-Means |
skmeans | Spherical k-Means Clustering |
skpr | Design of Experiments Suite: Generate and Evaluate Optimal Designs |
Sky | Canopy Openness Analyzer Package |
skynet | Generates Networks from BTS Data |
slackr | Send Messages, Images, R Objects and Files to 'Slack' Channels/Users |
slam | Sparse Lightweight Arrays and Matrices |
SLC | Slope and level change |
sld | Estimation and Use of the Quantile-Based Skew Logistic Distribution |
SLDAssay | Software for Analyzing Limiting Dilution Assays |
sleekts | 4253H, Twice Smoothing |
sleepr | Analyse Activity and Sleep Behaviour |
sleepwalk | Interactively Explore Dimension-Reduced Embeddings |
SLEMI | Statistical Learning Based Estimation of Mutual Information |
Sleuth2 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)" |
Sleuth3 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)" |
slfm | Fitting a Bayesian Sparse Latent Factor Model in Gene Expression Analysis |
slga | Data Access Tools for the Soil and Landscape Grid of Australia |
SLHD | Maximin-Distance (Sliced) Latin Hypercube Designs |
SLICER | Selective Locally Linear Inference of Cellular Expression Relationships |
slickR | Create Interactive Carousels with the JavaScript 'Slick' Library |
SLIDE | Single Cell Linkage by Distance Estimation is SLIDE |
slider | Sliding Window Functions |
slideview | Compare Raster Images Side by Side with a Slider |
slim | Singular Linear Models for Longitudinal Data |
slimrec | Sparse Linear Method to Predict Ratings and Top-N Recommendations |
slippymath | Slippy Map Tile Tools |
slm | Stationary Linear Models |
sloop | Helpers for 'OOP' in R |
SLOPE | Sorted L1 Penalized Estimation |
slouch | Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses |
slowraker | A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm |
slp | Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers |
slurmR | A Lightweight Wrapper for 'Slurm' |
sm | Smoothing Methods for Nonparametric Regression and Density Estimation |
smaa | Stochastic Multi-Criteria Acceptability Analysis |
smacof | Multidimensional Scaling |
smacpod | Statistical Methods for the Analysis of Case-Control Point Data |
smallarea | Fits a Fay Herriot Model |
SmallCountRounding | Small Count Rounding of Tabular Data |
smam | Statistical Modeling of Animal Movements |
smapr | Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data |
SMARTAR | Sequential Multiple Assignment Randomized Trial and Adaptive Randomization |
smartdata | Data Preprocessing |
SmartEDA | Summarize and Explore the Data |
SmarterPoland | Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl |
smartmap | Smartly Create Maps from R Objects |
SMARTp | Sample Size for SMART Designs in Non-Surgical Periodontal Trials |
smartR | Spatial Management and Assessment of Demersal Resources for Trawl Fisheries |
SmartSifter | Online Unsupervised Outlier Detection Using Finite Mixtures with Discounting Learning Algorithms |
smartsizer | Power Analysis for a SMART Design |
SmartSVA | Fast and Robust Surrogate Variable Analysis |
smatr | (Standardised) Major Axis Estimation and Testing Routines |
smbinning | Scoring Modeling and Optimal Binning |
SMC | Sequential Monte Carlo (SMC) Algorithm |
SmCCNet | Sparse Multiple Canonical Correlation Network Analysis Tool |
smcfcs | Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification |
smco | A simple Monte Carlo optimizer using adaptive coordinate sampling |
SMCRM | Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012) |
smcure | Fit Semiparametric Mixture Cure Models |
smdata | Data to Accompany Smithson & Merkle, 2013 |
SMDIC | Identification of Somatic Mutation-Driven Immune Cells |
smds | Symbolic Multidimensional Scaling |
smerc | Statistical Methods for Regional Counts |
SMFI5 | R functions and data from Chapter 5 of 'Statistical Methods for Financial Engineering' |
SMFilter | Filtering Algorithms for the State Space Models on the Stiefel Manifold |
smfsb | Stochastic Modelling for Systems Biology |
smicd | Statistical Methods for Interval-Censored Data |
smirnov | Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book |
SmithWilsonYieldCurve | Smith-Wilson Yield Curve Construction |
SMITIDstruct | Data Structure and Manipulations Tool for Host and Viral Population |
SMITIDvisu | Visualize Data for Host and Viral Population from 'SMITIDstruct' using HTMLwidgets |
SMLE | Joint Feature Screening via Sparse MLE |
SMLoutliers | Outlier Detection Using Statistical and Machine Learning Methods |
SMM | Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models |
SMMA | Soft Maximin Estimation for Large Scale Array-Tensor Models |
SMMT | The Swiss Municipality Merger Tool Maps Municipalities Over Time |
SMNCensReg | Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions |
smnet | Smoothing for Stream Network Data |
smog | Structural Modeling by using Overlapped Group Penalty |
smoke | Small Molecule Octet/BLI Kinetics Experiment |
smoof | Single and Multi-Objective Optimization Test Functions |
smooth | Forecasting Using State Space Models |
smoothAPC | Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects |
smoothedLasso | Smoothed LASSO Regression via Nesterov Smoothing |
smoother | Functions Relating to the Smoothing of Numerical Data |
SmoothHazard | Estimation of Smooth Hazard Models for Interval-Censored Data with Applications to Survival and Illness-Death Models |
smoothHR | Smooth Hazard Ratio Curves Taking a Reference Value |
smoothie | Two-dimensional Field Smoothing |
smoothmest | Smoothed M-estimators for 1-dimensional location |
smoothr | Smooth and Tidy Spatial Features |
smoothROCtime | Smooth Time-Dependent ROC Curve Estimation |
smoothSurv | Survival Regression with Smoothed Error Distribution |
smoothtail | Smooth Estimation of GPD Shape Parameter |
SmoothWin | Soft Windowing on Linear Regression |
smoots | Nonparametric Estimation of the Trend and Its Derivatives in TS |
smotefamily | A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE |
smovie | Some Movies to Illustrate Concepts in Statistics |
smpic | Creates Images Sized for Social Media |
SMPracticals | Practicals for Use with Davison (2003) Statistical Models |
SMR | Externally Studentized Midrange Distribution |
sms | Spatial Microsimulation |
smss | Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences" |
smurf | Sparse Multi-Type Regularized Feature Modeling |
SMUT | Multi-SNP Mediation Intersection-Union Test |
SMVar | Structural Model for variances |
sn | The Skew-Normal and Related Distributions Such as the Skew-t |
sna | Tools for Social Network Analysis |
snahelper | 'RStudio' Addin for Network Analysis and Visualization |
snakecase | Convert Strings into any Case |
SnakesAndLaddersAnalysis | Play and Analyse the Game of Snakes and Ladders |
snappier | Compress and Decompress 'Snappy' Encoded Data |
snapshot | Gadget N-body cosmological simulation code snapshot I/O utilities |
snem | EM Algorithm for Multivariate Skew-Normal Distribution with Overparametrization |
snfa | Smooth Non-Parametric Frontier Analysis |
SNFtool | Similarity Network Fusion |
snht | Standard Normal Homogeneity Test |
snipEM | Snipping Methods for Robust Estimation and Clustering |
snn | Stabilized Nearest Neighbor Classifier |
snnR | Sparse Neural Networks for Genomic Selection in Animal Breeding |
snotelr | Calculate and Visualize 'SNOTEL' Snow Data and Seasonality |
snow | Simple Network of Workstations |
SnowballC | Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library |
snowboot | Bootstrap Methods for Network Inference |
snowfall | Easier cluster computing (based on snow) |
snowflakes | Random Snowflake Generator |
snowFT | Fault Tolerant Simple Network of Workstations |
snp.plotter | snp.plotter |
snpar | Supplementary Non-parametric Statistics Methods |
SNPassoc | SNPs-based whole genome association studies |
snpEnrichment | SNPs Enrichment Analysis |
SNPknock | Knockoffs for Hidden Markov Models and Genetic Data |
snplist | Tools to Create Gene Sets |
sNPLS | NPLS Regression with L1 Penalization |
SNPmaxsel | Maximally selected statistics for SNP data |
SNPMClust | Bivariate Gaussian Genotype Clustering and Calling for Illumina Microarrays |
snpReady | Preparing Genotypic Datasets in Order to Run Genomic Analysis |
snpStatsWriter | Flexible writing of snpStats objects to flat files |
sns | Stochastic Newton Sampler (SNS) |
SNscan | Scan Statistics in Social Networks |
SNSequate | Standard and Nonstandard Statistical Models and Methods for Test Equating |
SOAR | Memory management in R by delayed assignments |
sobir | Significance of Boundaries |
sobolnp | Nonparametric Sobol Estimator with Bootstrap Bandwidth |
SobolSequence | Sobol Sequences with Better Two-Dimensional Projections |
soc.ca | Specific Correspondence Analysis for the Social Sciences |
socceR | Evaluating Sport Tournament Predictions |
SocEpi | Health Inequality Analysis |
social | Social Autocorrelation |
socialmixr | Social Mixing Matrices for Infectious Disease Modelling |
SocialNetworks | Generates social networks based on distance |
SocialPosition | Social Position Indicators Construction Toolbox |
sociome | Operationalizing Social Determinants of Health Data for Researchers |
socviz | Utility Functions and Data Sets for Data Visualization |
SoDA | Functions and Examples for "Software for Data Analysis" |
sodavis | SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models |
sodium | A Modern and Easy-to-Use Crypto Library |
sofa | Connector to 'CouchDB' |
Sofi | Interfaz interactiva con fines didacticos |
SOFIA | Making Sophisticated and Aesthetical Figures in R |
softclassval | Soft Classification Performance Measures |
SoftClustering | Soft Clustering Algorithms |
softImpute | Matrix Completion via Iterative Soft-Thresholded SVD |
softmaxreg | Training Multi-Layer Neural Network for Softmax Regression and Classification |
SoftRandomForest | Classification Random Forests for Soft Decision Trees |
SOIL | Sparsity Oriented Importance Learning |
soilassessment | Assessment Models for Agriculture Soil Conditions and Crop Suitability |
soilcarbon | Tools to Analyze Soil Carbon Database Created by Powell Center Working Group |
soilDB | Soil Database Interface |
SoilHyP | Soil Hydraulic Properties |
soilphysics | Soil Physical Analysis |
SoilR | Models of Soil Organic Matter Decomposition |
soiltexture | Functions for Soil Texture Plot, Classification and Transformation |
soilwater | Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve |
Sojourn | Apply Sojourn Methods for Processing ActiGraph Accelerometer Data |
Sojourn.Data | Supporting Objects for Sojourn Accelerometer Methods |
sokoban | Sokoban Game |
solaR | Radiation and Photovoltaic Systems |
solarPos | Solar Position Algorithm for Solar Radiation Applications |
solartime | Utilities Dealing with Solar Time Such as Sun Position and Time of Sunrise |
solitude | An Implementation of Isolation Forest |
SOLOMON | Parentage analysis |
solrad | Calculating Solar Radiation and Related Variables Based on Location, Time and Topographical Conditions |
solrium | General Purpose R Interface to 'Solr' |
solvebio | The Official SolveBio API Client |
SolveRationalMatrixEquation | Solve Rational Matrix Equation |
som | Self-Organizing Map |
som.nn | Topological k-NN Classifier Based on Self-Organising Maps |
soma | General-Purpose Optimisation With the Self-Organising Migrating Algorithm |
SOMbrero | SOM Bound to Realize Euclidean and Relational Outputs |
somebm | some Brownian motions simulation functions |
someKfwer | Controlling the Generalized Familywise Error Rate |
someMTP | Some Multiple Testing Procedures |
sommer | Solving Mixed Model Equations in R |
somplot | Visualisation of hexagonal Kohonen maps |
sonar | Fundamental Formulas for Sonar |
SongEvo | An Individual-Based Model of Bird Song Evolution |
sonicLength | Estimating Abundance of Clones from DNA Fragmentation Data |
sonicscrewdriver | Bioacoustic Analysis and Publication Tools |
sonify | Data Sonification - Turning Data into Sound |
soobench | Single Objective Optimization Benchmark Functions |
SOPIE | Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar |
soptdmaeA | Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments |
soql | Helps Make Socrata Open Data API Calls |
SOR | Estimation using Sequential Offsetted Regression |
sorocs | A Bayesian Semiparametric Approach to Correlated ROC Surfaces |
SorptionAnalysis | Static Adsorption Experiment Plotting and Analysis |
sortable | Drag-and-Drop in 'shiny' Apps with 'SortableJS' |
SortableHTMLTables | Turns a data frame into an HTML file containing a sortable table |
SortedEffects | Estimation and Inference Methods for Sorted Causal Effects and Classification Analysis |
sorvi | Finnish Open Government Data Toolkit |
sos | Search Contributed R Packages, Sort by Package |
sotkanet | Sotkanet Open Data Access and Analysis |
sotu | United States Presidential State of the Union Addresses |
sound | A Sound Interface for R |
soundcorrs | Semi-Automatic Analysis of Sound Correspondences |
soundecology | Soundscape Ecology |
SoundexBR | Phonetic-Coding for Portuguese |
soundgen | Parametric Voice Synthesis |
SOUP | Stochastic Ordering Using Permutations (and Pairwise Comparisons) |
SoupX | Single Cell mRNA Soup eXterminator |
source.gist | Read R code from a GitHub Gist |
SourceSet | A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways |
sourcetools | Tools for Reading, Tokenizing and Parsing R Code |
SoyNAM | Soybean Nested Association Mapping Dataset |
sp | Classes and Methods for Spatial Data |
SP2000 | Catalogue of Life Toolkit |
sp23design | Design and Simulation of seamless Phase II-III Clinical Trials |
spaa | SPecies Association Analysis |
SpaCCr | Spatial Convex Clustering |
space | Sparse PArtial Correlation Estimation |
spaceNet | Latent Space Models for Multidimensional Networks |
spacesRGB | Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ |
spacesXYZ | CIE XYZ and some of Its Derived Color Spaces |
spacetime | Classes and Methods for Spatio-Temporal Data |
spacey | Easily Obtain Spatial Data and Make Better Maps |
spacyr | Wrapper to the 'spaCy' 'NLP' Library |
SPADAR | Spherical Projections of Astronomical Data |
spAddins | A Set of RStudio Addins |
SpadeR | Species-Richness Prediction and Diversity Estimation with R |
SpaDES | Develop and Run Spatially Explicit Discrete Event Simulation Models |
SpaDES.addins | Development Tools for 'SpaDES' and 'SpaDES' Modules |
SpaDES.core | Core Utilities for Developing and Running Spatially Explicit Discrete Event Models |
SpaDES.tools | Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models |
spaero | Software for Project AERO |
spagmix | Artificial Spatial and Spatiotemporal Densities on Bounded Windows |
spam | SPArse Matrix |
spam64 | 64-Bit Extension of the SPArse Matrix R Package 'spam' |
spaMM | Mixed-Effect Models, Particularly Spatial Models |
spanel | Spatial Panel Data Models |
spanish | Translate Quantities from Strings to Integer and Back. Misc Functions on Spanish Data |
spANOVA | Spatial Analysis of Field Trials Experiments using Geostatistics and Spatial Autoregressive Model |
spant | MR Spectroscopy Analysis Tools |
SPAr | Perform rare variants association analysis based on summation of partition approaches |
sparcl | Perform Sparse Hierarchical Clustering and Sparse K-Means Clustering |
spark.sas7bdat | Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark' |
sparkavro | Load Avro file into 'Apache Spark' |
sparkbq | Google 'BigQuery' Support for 'sparklyr' |
sparkhail | A 'Sparklyr' Extension for 'Hail' |
sparkline | 'jQuery' Sparkline 'htmlwidget' |
sparklyr | R Interface to Apache Spark |
sparklyr.nested | A 'sparklyr' Extension for Nested Data |
sparktex | Generate LaTeX sparklines in R |
sparktf | Interface for 'TensorFlow' 'TFRecord' Files with 'Apache Spark' |
sparkwarc | Load WARC Files into Apache Spark |
sparkxgb | Interface for 'XGBoost' on 'Apache Spark' |
SPARQL | SPARQL client |
sparr | Spatial and Spatiotemporal Relative Risk |
sparrpowR | Power Analysis to Detect Spatial Relative Clusters |
sparseBC | Sparse Biclustering of Transposable Data |
SparseBiplots | 'HJ-Biplot' using Different Ways of Penalization Plotting with 'ggplot2' |
sparsebn | Learning Sparse Bayesian Networks from High-Dimensional Data |
sparsebnUtils | Utilities for Learning Sparse Bayesian Networks |
SparseDC | Implementation of SparseDC Algorithm |
sparseEigen | Computation of Sparse Eigenvectors of a Matrix |
SparseFactorAnalysis | Scaling Count and Binary Data with Sparse Factor Analysis |
sparseFLMM | Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data |
SparseGrid | Sparse grid integration in R |
sparseHessianFD | Numerical Estimation of Sparse Hessians |
sparseIndexTracking | Design of Portfolio of Stocks to Track an Index |
sparseinv | Computation of the Sparse Inverse Subset |
sparseLDA | Sparse Discriminant Analysis |
SparseLPM | The Sparse Latent Position Model for Nonnegative Interaction Data |
sparseLTSEigen | RcppEigen back end for sparse least trimmed squares regression |
SparseM | Sparse Linear Algebra |
sparseMatEst | Sparse Matrix Estimation and Inference |
SparseMDC | Implementation of SparseMDC Algorithm |
SparseMSE | 'Multiple Systems Estimation for Sparse Capture Data' |
sparseMVN | Multivariate Normal Functions for Sparse Covariance and Precision Matrices |
sparsenet | Fit Sparse Linear Regression Models via Nonconvex Optimization |
sparsepca | Sparse Principal Component Analysis (SPCA) |
sparsepp | 'Rcpp' Interface to 'sparsepp' |
sparsereg | Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data |
sparseSEM | Sparse-aware Maximum Likelihood for Structural Equation Models |
sparsestep | SparseStep Regression |
sparsesvd | Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') |
sparseSVM | Solution Paths of Sparse High-Dimensional Support Vector Machine with Lasso or Elastic-Net Regularization |
sparsevar | Sparse VAR/VECM Models Estimation |
sparsio | I/O Operations with Sparse Matrices |
SPAS | Stratified-Petersen Analysis System |
spate | Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach |
SpatEntropy | Spatial Entropy Measures |
SPAtest | Score Test and Meta-Analysis Based on Saddlepoint Approximation |
spatgraphs | Graph Edge Computations for Spatial Point Patterns |
spathial | Evolutionary Analysis |
spatial | Functions for Kriging and Point Pattern Analysis |
SpatialAcc | Spatial Accessibility Measures |
SpatialBall | Spatial NBA Visualization and Analysis |
SpatialBSS | Blind Source Separation for Multivariate Spatial Data |
spatialClust | Spatial Clustering using Fuzzy Geographically Weighted Clustering |
spatialCovariance | Computation of Spatial Covariance Matrices for Data on Rectangles |
spatialEco | Spatial Analysis and Modelling Utilities |
SpatialEpi | Methods and Data for Spatial Epidemiology |
SpatialEpiApp | A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data |
SpatialExtremes | Modelling Spatial Extremes |
spatialfil | Application of 2D Convolution Kernel Filters to Matrices or 3D Arrays |
SpatialFloor | Spatial Floor Simulation (Isotropic) |
spatialfusion | Multivariate Analysis of Spatial Data Using a Unifying Spatial Fusion Framework |
SpatialGraph | SpatialGraph Class |
SpatialKDE | Kernel Density Estimation for Spatial Data |
SpatialML | Spatial Machine Learning |
spatialnbda | Performs spatial NBDA in a Bayesian context |
SpatialNP | Multivariate Nonparametric Methods Based on Spatial Signs and Ranks |
SpatialPack | Tools for Assessment the Association Between Two Spatial Processes |
SpatialPosition | Spatial Position Models |
spatialprobit | Spatial Probit Models |
spatialreg | Spatial Regression Analysis |
spatialrisk | Calculating Spatial Risk |
SpatialRoMLE | Robust Maximum Likelihood Estimation for Spatial Error Model |
spatialsegregation | Segregation Measures for Multitype Spatial Point Patterns |
SpatialTools | Tools for Spatial Data Analysis |
SpatialVS | Spatial Variable Selection |
SpatialVx | Spatial Forecast Verification |
spatialwarnings | Spatial Early Warning Signals of Ecosystem Degradation |
spatialwidget | Formats Spatial Data for Use in Htmlwidgets |
SpaTimeClus | Model-Based Clustering of Spatio-Temporal Data |
SpatMCA | Regularized Spatial Maximum Covariance Analysis |
SpatPCA | Regularized Principal Component Analysis for Spatial Data |
SpATS | Spatial Analysis of Field Trials with Splines |
spatsoc | Group Animal Relocation Data by Spatial and Temporal Relationship |
spatstat | Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
spatstat.data | Datasets for 'spatstat' |
spatstat.gui | Interactive Graphics Functions for the 'spatstat' Package |
spatstat.Knet | Extension to 'spatstat' for Large Datasets on a Linear Network |
spatstat.local | Extension to 'spatstat' for Local Composite Likelihood |
spatstat.sparse | Sparse Three-Dimensional Arrays and Linear Algebra Utilities |
spatstat.utils | Utility Functions for 'spatstat' |
spatsurv | Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models |
spbabel | Convert Spatial Data Using Tidy Tables |
spBayes | Univariate and Multivariate Spatial-Temporal Modeling |
spBayesSurv | Bayesian Modeling and Analysis of Spatially Correlated Survival Data |
spBFA | Spatial Bayesian Factor Analysis |
Spbsampling | Spatially Balanced Sampling |
spc | Statistical Process Control – Calculation of ARL and Other Control Chart Performance Measures |
spc4sts | Statistical Process Control for Stochastic Textured Surfaces |
spcadjust | Functions for Calibrating Control Charts |
SPCALDA | A New Reduced-Rank Linear Discriminant Analysis Method |
SPCAvRP | Sparse Principal Component Analysis via Random Projections (SPCAvRP) |
SPCDAnalyze | Design and Analyze Studies using the Sequential Parallel Comparison Design |
spcosa | Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata |
spcov | Sparse Estimation of a Covariance Matrix |
spCP | Spatially Varying Change Points |
spcr | Sparse Principal Component Regression |
spd | Semi Parametric Distribution |
spData | Datasets for Spatial Analysis |
spdep | Spatial Dependence: Weighting Schemes, Statistics |
spdownscale | Spatial Downscaling Using Bias Correction Approach |
spdplyr | Data Manipulation Verbs for the Spatial Classes |
spduration | Split-Population Duration (Cure) Regression |
spdynmod | Spatio-Dynamic Wetland Plant Communities Model |
spe | Stochastic Proximity Embedding |
speaq | Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations |
spearmanCI | Jackknife Euclidean / Empirical Likelihood Inference for Spearman's Rho |
spec | A Data Specification Format and Interface |
speccalt | Alternative spectral clustering, with automatic estimation of k |
SpecDetec | Change Points Detection with Spectral Clustering |
SpecHelpers | Spectroscopy Related Utilities |
SPECIES | Statistical package for species richness estimation |
specklestar | Reduction of Speckle Data from BTA 6-m Telescope |
specmine | Metabolomics and Spectral Data Analysis and Mining |
specr | Conducting and Visualizing Specification Curve Analyses |
specs | Single-Equation Penalized Error-Correction Selector (SPECS) |
SpecsVerification | Forecast Verification Routines for Ensemble Forecasts of Weather and Climate |
spectacles | Storing, Manipulating and Analysis Spectroscopy and Associated Data |
spectral | Common Methods of Spectral Data Analysis |
spectralAnalysis | Pre-Process, Visualize and Analyse Process Analytical Data, by Spectral Data Measurements Made During a Chemical Process |
spectralGP | Approximate Gaussian Processes Using the Fourier Basis |
spectralGraphTopology | Learning Graphs from Data via Spectral Constraints |
SpectralMap | Diffusion Map and Spectral Map |
spectrino | Spectra Viewer, Organizer, Data Preparation and Property Blocks |
spectrolab | Class and Methods for Hyperspectral Data |
Spectrum | Fast Adaptive Spectral Clustering for Single and Multi-View Data |
sped | Multi-Gene Descent Probabilities |
SPEDInstabR | Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept |
speech | Legislative Speeches |
speedglm | Fitting Linear and Generalized Linear Models to Large Data Sets |
spef | Semiparametric Estimating Functions |
speff2trial | Semiparametric efficient estimation for a two-sample treatment effect |
SPEI | Calculation of the Standardised Precipitation-Evapotranspiration Index |
spellcheckr | Correct the Spelling of a Given Word in the English Language |
spelling | Tools for Spell Checking in R |
spemd | A Bi-Dimensional Implementation of the Empirical Mode Decomposition for Spatial Data |
sperich | Auxiliary Functions to Estimate Centers of Biodiversity |
sperrorest | Perform Spatial Error Estimation and Variable Importance in Parallel |
spex | Spatial Extent Tools |
spfrontier | Spatial Stochastic Frontier Models |
spFSR | Feature Selection and Ranking by Simultaneous Perturbation Stochastic Approximation |
spftir | Pre-Processing and Analysis of Mid-Infrared Spectral Region |
spgrass6 | Interface Between GRASS 6+ Geographical Information System and R |
spgs | Statistical Patterns in Genomic Sequences |
spgwr | Geographically Weighted Regression |
spherepc | Spherical Principal Curves |
sphereplot | Spherical plotting |
SphericalCubature | Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates |
SphericalK | Spherical K-Function |
sphet | Estimation of Spatial Autoregressive Models with and without Heteroscedasticity |
spi | Compute SPI index |
SPIAssay | A Genetic-Based Assay for the Identification of Cell Lines |
spider | Species Identity and Evolution in R |
spiderbar | Parse and Test Robots Exclusion Protocol Files and Rules |
spiders | Fits Predator Preferences Model |
SPIGA | Compute SPI Index using the Methods Genetic Algorithm and Maximum Likelihood |
spikes | Detecting Election Fraud from Irregularities in Vote-Share Distributions |
spikeslab | Prediction and variable selection using spike and slab regression |
spikeSlabGAM | Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models |
SPIn | Simulation-efficient Shortest Probability Intervals |
SPINA | Structure Parameter Inference Approach |
spinBayes | Semi-Parametric Gene-Environment Interaction via Bayesian Variable Selection |
spind | Spatial Methods and Indices |
spinifex | Manual Tours, Manual Control of Dynamic Projections of Numeric Multivariate Data |
spinyReg | Sparse Generative Model and Its EM Algorithm |
spiR | Wrapper for the Social Progress Index Data |
spiritR | Template for Clinical Trial Protocol |
splancs | Spatial and Space-Time Point Pattern Analysis |
splashr | Tools to Work with the 'Splash' 'JavaScript' Rendering and Scraping Service |
splines2 | Regression Spline Functions and Classes |
splinetree | Longitudinal Regression Trees and Forests |
splitFeas | Multi-Set Split Feasibility |
splitfngr | Combined Evaluation and Split Access of Functions |
splithalf | Calculate Task Split Half Reliability Estimates |
splithalfr | Extensible Bootstrapped Split-Half Reliabilities |
SplitReg | Split Regularized Regression |
splitSelect | Best Split Selection Modeling for Low-Dimensional Data |
SplitSoftening | Softening Splits in Decision Trees |
splitstackshape | Stack and Reshape Datasets After Splitting Concatenated Values |
splitTools | Tools for Data Splitting |
splm | Econometric Models for Spatial Panel Data |
splot | Split Plot |
spls | Sparse Partial Least Squares (SPLS) Regression and Classification |
splus2R | Supplemental S-PLUS Functionality in R |
splusTimeDate | Times and Dates from S-PLUS |
splusTimeSeries | Time Series from S-PLUS |
spm | Spatial Predictive Modeling |
spm12r | Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging' |
spMaps | Europe SpatialPolygonsDataFrame Builder |
spMC | Continuous-Lag Spatial Markov Chains |
SPmlficmcm | Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs |
spmoran | Moran Eigenvector-Based Scalable Spatial Additive Mixed Modeling |
spnet | Plotting (Social) Networks on Maps |
SpNetPrep | Linear Network Preprocessing for Spatial Statistics |
SpNMF | Supervised NMF |
spnn | Scale Invariant Probabilistic Neural Networks |
spNNGP | Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes |
spocc | Interface to Species Occurrence Data Sources |
SPODT | Spatial Oblique Decision Tree |
spongebob | SpongeBob-Case Converter : spOngEboB-CASe CoNVertER |
spongecake | Transform a Movie into a Synthetic Picture |
spork | Generalized Label Formatting |
sporm | Semiparametric proportional odds rate model |
sport | Sequential Pairwise Online Rating Techniques |
SportsAnalytics | Infrastructure for Sports Analytics |
SPOT | Sequential Parameter Optimization Toolbox |
spotGUI | Graphical User Interface for the Package 'SPOT' |
spp | ChIP-Seq Processing Pipeline |
SPPcomb | Combining Different Spatial Datasets in Cancer Risk Estimation |
sppmix | Modeling Spatial Poisson and Related Point Processes |
spray | Sparse Arrays and Multivariate Polynomials |
spread | Infectious Disease Spread Models |
spreadr | Simulating Spreading Activation in a Network |
SPREDA | Statistical Package for Reliability Data Analysis |
SPreFuGED | Selecting a Predictive Function for a Given Gene Expression Data |
SPreg | Bias Reduction in the Skew-Probit Model for a Binary Response |
sprex | Calculate Species Richness and Extrapolation Metrics |
springer | Sparse Group Variable Selection for Gene-Environment Interactions in the Longitudinal Study |
sprintr | Sparse Reluctant Interaction Modeling |
sprm | Sparse and Non-Sparse Partial Robust M Regression and Classification |
sprsmdl | Sparse modeling toolkit |
SPRT | Wald's Sequential Probability Ratio Test |
spsann | Optimization of Sample Configurations using Spatial Simulated Annealing |
spselect | Selecting Spatial Scale of Covariates in Regression Models |
spsh | Estimation and Prediction of Parameters of Various Soil Hydraulic Property Models |
spsi | Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation |
SPSL | Site Percolation on Square Lattices (SPSL) |
spsur | Spatial Seemingly Unrelated Regression Models |
spsurv | Bernstein Polynomial Based Semiparametric Survival Analysis |
spsurvey | Spatial Survey Design and Analysis |
spt | Sierpinski Pedal Triangle |
spTDyn | Spatially Varying and Spatio-Temporal Dynamic Linear Models |
spThin | Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models |
spTimer | Spatio-Temporal Bayesian Modelling |
sptm | SemiParametric Transformation Model Methods |
sptotal | Predicting Totals and Weighted Sums from Spatial Data |
spup | Spatial Uncertainty Propagation Analysis |
spuRs | Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R" |
SPUTNIK | SPatially aUTomatic deNoising for Ims toolKit |
SPYvsSPY | Spy vs. Spy Data |
SQB | Sequential Bagging on Regression |
SQDA | Sparse Quadratic Discriminant Analysis |
sqldf | Manipulate R Data Frames Using SQL |
sqliter | Connection wrapper to SQLite databases |
sqlparseR | Wrapper for 'Python' Module 'sqlparse': Parse, Split, and Format 'SQL' |
SqlRender | Rendering Parameterized SQL and Translation to Dialects |
sqlscore | Utilities for Generating SQL Queries from Model Objects |
sqlutils | Utilities for working with SQL files |
SQN | subset quantile normalization |
sqp | (Sequential) Quadratic Programming |
SQRL | Enhanced Database Interactivity |
SQUAREM | Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms |
squash | Color-Based Plots for Multivariate Visualization |
squashinformr | Politely Web Scrape Data from SquashInfo |
squid | Statistical Quantification of Individual Differences |
sra | Selection Response Analysis |
SRCS | Statistical Ranking Color Scheme for Multiple Pairwise Comparisons |
sRDA | Sparse Redundancy Analysis |
srm | Structural Equation Modeling for the Social Relations Model |
sROC | Nonparametric Smooth ROC Curves for Continuous Data |
srp | Smooth-Rough Partitioning of the Regression Coefficients |
SRRS | The Stepwise Response Refinement Screener (SRRS) |
SRTtools | Adjust Srt File to Get Better Experience when Watching Movie |
srvyr | 'dplyr'-Like Syntax for Summary Statistics of Survey Data |
ss3sim | Fisheries Stock Assessment Simulation Testing with Stock Synthesis |
ssanv | Sample Size Adjusted for Nonadherence or Variability of Input Parameters |
SSBtools | Statistics Norway's Miscellaneous Tools |
ssc | Semi-Supervised Classification Methods |
sscor | Robust Correlation Estimation and Testing Based on Spatial Signs |
ssd | Sample Size Determination (SSD) for Unordered Categorical Data |
SSDforR | Functions to Analyze Single System Data |
SSDM | Stacked Species Distribution Modelling |
sSDR | Tools Developed for Structured Sufficient Dimension Reduction (sSDR) |
ssdtools | Species Sensitivity Distributions |
sse | Sample Size Estimation |
ssev | Sample Size Computation for Fixed N with Optimal Reward |
ssfa | Spatial Stochastic Frontier Analysis |
ssfit | Fitting of parametric models using summary statistics |
ssgraph | Bayesian Graphical Estimation using Spike-and-Slab Priors |
ssh | Secure Shell (SSH) Client for R |
ssh.utils | Local and remote system commands with output and error capture |
SSHAARP | Searching Shared HLA Amino Acid Residue Prevalence |
ssize.fdr | Sample Size Calculations for Microarray Experiments |
ssizeRNA | Sample Size Calculation for RNA-Seq Experimental Design |
SSLASSO | The Spike-and-Slab LASSO |
SSLR | Semi-Supervised Classification and Regression Methods |
SSM | Fit and Analyze Smooth Supersaturated Models |
ssmn | Skew Scale Mixtures of Normal Distributions |
ssMousetrack | Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan |
ssmrob | Robust Estimation and Inference in Sample Selection Models |
ssmsn | Scale-Shape Mixtures of Skew-Normal Distributions |
SSN | Spatial Modeling on Stream Networks |
SSOSVM | Stream Suitable Online Support Vector Machines |
SSP | Simulated Sampling Procedure for Community Ecology |
sspline | Smoothing Splines on the Sphere |
sspse | Estimating Hidden Population Size using Respondent Driven Sampling Data |
ssr | Semi-Supervised Regression Methods |
SSRA | Sakai Sequential Relation Analysis |
SSrat | Two-Dimensional Sociometric Status Determination with Rating Scales |
ssrm.logmer | Sample Size Determination for Longitudinal Designs with Binary Outcome |
SSRMST | Sample Size Calculation using Restricted Mean Survival Time |
ssrn | Scan Statistics for Railway Network |
sss | Tools for Importing Files in the Triple-s (Standard Survey Structure) Format |
sssc | Same Species Sample Contamination Detection |
SSsimple | State Space Models |
Sstack | Bootstrap Stacking of Random Forest Models for Heterogeneous Data |
sstModel | Swiss Solvency Test (SST) Standard Models |
ssvd | Sparse SVD |
ssym | Fitting Semi-Parametric log-Symmetric Regression Models |
st | Shrinkage t Statistic and Correlation-Adjusted t-Score |
stability | Stability Analysis of Genotype by Environment Interaction (GEI) |
StabilizedRegression | Stabilizing Regression and Variable Selection |
stable | Probability Functions and Generalized Regression Models for Stable Distributions |
stabledist | Stable Distribution Functions |
StableEstim | Estimate the Four Parameters of Stable Laws using Different Methods |
stableGR | A Stable Gelman-Rubin Diagnostic for Markov Chain Monte Carlo |
stablelearner | Stability Assessment of Statistical Learning Methods |
stablespec | Stable Specification Search in Structural Equation Models |
stabm | Stability Measures for Feature Selection |
stabreg | Linear Regression with the Stable Distribution |
stabs | Stability Selection with Error Control |
stackoverflow | Stack Overflow's Greatest Hits |
stacomirtools | 'ODBC' Connection Class for Package stacomiR |
stagedtrees | Staged Event Trees |
stagePop | Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time |
StakeholderAnalysis | Measuring Stakeholder Influence |
stam | Spatio-Temporal Analysis and Modelling |
StAMPP | Statistical Analysis of Mixed Ploidy Populations |
stampr | Spatial Temporal Analysis of Moving Polygons |
STAND | Statistical Analysis of Non-Detects |
standardize | Tools for Standardizing Variables for Regression in R |
StandardizeText | Standardize Text |
StanHeaders | C++ Header Files for Stan |
stapler | Simultaneous Truth and Performance Level Estimation |
STAR | Spike Train Analysis with R |
staRdom | PARAFAC Analysis of EEMs from DOM |
stargazer | Well-Formatted Regression and Summary Statistics Tables |
starm | Spatio-Temporal Autologistic Regression Model |
starma | Modelling Space Time AutoRegressive Moving Average (STARMA) Processes |
starnet | Stacked Elastic Net |
stars | Spatiotemporal Arrays, Raster and Vector Data Cubes |
starsExtra | Miscellaneous Functions for Working with 'stars' Rasters |
STARTdesign | Single to Double Arm Transition Design for Phase II Clinical Trials |
startR | Automatically Retrieve Multidimensional Distributed Data Sets |
STARTS | Functions for the STARTS Model |
startup | Friendly R Startup Configuration |
startupmsg | Utilities for Start-Up Messages |
starvars | Vector Logistic Smooth Transition Models / Realized Covariances Construction |
STAT | Interactive Document for Working with Basic Statistical Analysis |
STAT2 | Interactive Document for Working with Basic Statistical Analysis |
Stat2Data | Datasets for Stat2 |
statar | Tools Inspired by 'Stata' to Manipulate Tabular Data |
statcanR | Client for Statistics Canada's Open Economic Data |
StatCharrms | Statistical Analysis of Chemistry, Histopathology, and Reproduction Endpoints Including Repeated Measures and Multi-Generation Studies |
statcheck | Extract Statistics from Articles and Recompute p Values |
statcomp | Statistical Complexity and Information Measures for Time Series Analysis |
StatDA | Statistical Analysis for Environmental Data |
StatDataML | Read and Write StatDataML Files |
statebins | Create United States Uniform Cartogram Heatmaps |
states | Create Panels of Independent States |
statespacer | State Space Modelling in 'R' |
statgenGWAS | Genome Wide Association Studies |
statgenSTA | Single Trial Analysis (STA) of Field Trials |
statGraph | Statistical Methods for Graphs |
stationaRy | Detailed Meteorological Data from Stations All Over the World |
stationery | Working Examples for Reproducible Research Documents |
statip | Statistical Functions for Probability Distributions and Regression |
StatMatch | Statistical Matching or Data Fusion |
StatMeasures | Easy Data Manipulation, Data Quality and Statistical Checks |
statmod | Statistical Modeling |
statnet | Software Tools for the Statistical Analysis of Network Data |
statnet.common | Common R Scripts and Utilities Used by the Statnet Project Software |
statnetWeb | A Graphical User Interface for Network Modeling with 'Statnet' |
statnipokladna | Use Data from the Czech Public Finance Database |
staTools | Statistical Tools for Social Network Analysis |
StatPerMeCo | Statistical Performance Measures to Evaluate Covariance Matrix Estimates |
statprograms | Graduate Statistics Program Datasets |
statquotes | Quotes on Statistics, Data Visualization and Science |
StatRank | Statistical Rank Aggregation: Inference, Evaluation, and Visualization |
stats19 | Work with Open Road Traffic Casualty Data from Great Britain |
statsExpressions | Expressions with Statistical Details |
statsguRu | Extract, Visualize and Analyze Cricket Statistics from ESPNCricinfo's Statsguru |
statsr | Companion Software for the Coursera Statistics with R Specialization |
statVisual | Statistical Visualization Tools |
STB | Simultaneous Tolerance Bounds |
stcos | Space-Time Change of Support |
stcov | Stein's Covariance Estimator |
stddiff | Calculate the Standardized Difference for Numeric, Binary and Category Variables |
stdReg | Regression Standardization |
stdvectors | C++ Standard Library Vectors in R |
steadyICA | ICA and Tests of Independence via Multivariate Distance Covariance |
steemr | A Tool for Processing Steem Data |
steepness | Testing Steepness of Dominance Hierarchies |
SteinIV | Semi-Parametric Stein-Like Estimator with Instrumental Variables |
stellaR | stellar evolution tracks and isochrones |
Stem | Spatio-temporal models in R |
stemmatology | Stemmatological Analysis of Textual Traditions |
StempCens | Spatio-Temporal Estimation and Prediction for Censored/Missing Responses |
STEPCAM | ABC-SMC Inference of STEPCAM |
stepp | Subpopulation Treatment Effect Pattern Plot (STEPP) |
stepPenal | Stepwise Forward Variable Selection in Penalized Regression |
stepPlr | L2 Penalized Logistic Regression with Stepwise Variable Selection |
stepR | Multiscale Change-Point Inference |
StepReg | Stepwise Regression Analysis |
steps | Spatially- and Temporally-Explicit Population Simulator |
StepSignalMargiLike | Step-Wise Signal Extraction via Marginal Likelihood |
StepwiseTest | Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion |
StereoMorph | Stereo Camera Calibration and Reconstruction |
stevedore | Docker Client |
STGS | Genomic Selection using Single Trait |
STI | Calculation of the Standardized Temperature Index |
stickr | View and Use R Hex Stickers |
sticky | Persist Attributes Across Data Operations |
stilt | Separable Gaussian Process Interpolation (Emulation) |
stima | Simultaneous Threshold Interaction Modeling Algorithm |
stinepack | Stineman, a Consistently Well Behaved Method of Interpolation |
stlcsb | Tidy Manipulation of CSB Data for St. Louis |
stlnpp | Spatio-Temporal Analysis of Point Patterns on Linear Networks |
stlplus | Enhanced Seasonal Decomposition of Time Series by Loess |
stm | Estimation of the Structural Topic Model |
stmCorrViz | A Tool for Structural Topic Model Visualizations |
STMedianPolish | Spatio-Temporal Median Polish |
stmgp | Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data |
stmgui | Shiny Application for Creating STM Models |
stminsights | A 'Shiny' Application for Inspecting Structural Topic Models |
StMoMo | Stochastic Mortality Modelling |
StMoSim | Quantile-Quantile Plot with Several Gaussian Simulations |
STMotif | Discovery of Motifs in Spatial-Time Series |
stocc | Fit a Spatial Occupancy Model via Gibbs Sampling |
stochprofML | Stochastic Profiling using Maximum Likelihood Estimation |
stochQN | Stochastic Limited Memory Quasi-Newton Optimizers |
stochvol | Efficient Bayesian Inference for Stochastic Volatility (SV) Models |
stockR | Identifying Stocks in Genetic Data |
stocks | Stock Market Analysis |
stoichcalc | R Functions for Solving Stoichiometric Equations |
stokes | The Exterior Calculus |
STOPES | Selection Threshold Optimized Empirically via Splitting |
stopwords | Multilingual Stopword Lists |
Storm | Write Storm Bolts in R using the Storm Multi-Language Protocol |
stormwindmodel | Model Tropical Cyclone Wind Speeds |
storr | Simple Key Value Stores |
stoRy | Functions for the Analysis of Star Trek Thematic Data |
stosim | Stochastic Simulator for Reliability Modeling of Repairable Systems |
STPGA | Selection of Training Populations by Genetic Algorithm |
stplanr | Sustainable Transport Planning |
stpm | Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes |
stpp | Space-Time Point Pattern Simulation, Visualisation and Analysis |
stR | STR Decomposition |
STRAH | Short Tandem Repeats Analysis of Hotspot Zones |
StrainRanking | Ranking of Pathogen Strains |
strand | A Framework for Investment Strategy Simulation |
strap | Stratigraphic Tree Analysis for Palaeontology |
strat | An Implementation of the Stratification Index |
strataG | Summaries and Population Structure Analyses of Genetic Data |
stratallo | Optimum Sample Allocation in Stratified Random Sampling Scheme |
stratamatch | Stratification and Matching for Large Observational Data Sets |
stratbr | Optimal Stratification in Stratified Sampling |
strategicplayers | Strategic Players |
Strategy | Generic Framework to Analyze Trading Strategies |
stratEst | Strategy Estimation |
StrathE2E2 | End-to-End Marine Food Web Model |
stratification | Univariate Stratification of Survey Populations |
StratifiedBalancing | Stratified Covariate Balancing |
StratifiedMedicine | Stratified Medicine |
StratifiedRF | Builds Trees by Sampling Variables in Groups |
stratifyR | Optimal Stratification of Univariate Populations |
StratigrapheR | Integrated Stratigraphy |
StratSel | Strategic Selection Estimator |
STraTUS | Enumeration and Uniform Sampling of Transmission Trees for a Known Phylogeny |
stratvns | Optimal Stratification in Stratified Sampling |
straweib | Stratified Weibull Regression Model |
stray | Anomaly Detection in High Dimensional and Temporal Data |
stream | Infrastructure for Data Stream Mining |
streambugs | Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa |
streamDepletr | Estimate Streamflow Depletion Due to Groundwater Pumping |
StreamMetabolism | Calculate Single Station Metabolism from Diurnal Oxygen Curves |
streamMOA | Interface for MOA Stream Clustering Algorithms |
streamR | Access to Twitter Streaming API via R |
stressaddition | Modelling Tri-Phasic Concentration-Response Relationships |
stressr | Fetch and plot financial stress index and component data |
StressStrength | Computation and Estimation of Reliability of Stress-Strength Models |
strex | Extra String Manipulation Functions |
strider | Strided Iterator and Range |
String2AdjMatrix | Creates an Adjacency Matrix from a List of Strings |
stringb | Convenient Base R String Handling |
stringdist | Approximate String Matching, Fuzzy Text Search, and String Distance Functions |
stringfish | Alt String Implementation |
stringformattr | Dynamic String Formatting |
stringi | Character String Processing Facilities |
stringr | Simple, Consistent Wrappers for Common String Operations |
strip | Lighten your R Model Outputs |
stripless | Structured Trellis Displays Without Strips for Lattice Graphics |
striprtf | Extract Text from RTF File |
STRMPS | Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data |
StroupGLMM | R Codes and Datasets for Generalized Linear Mixed Models: Modern Concepts, Methods and Applications by Walter W. Stroup |
strucchange | Testing, Monitoring, and Dating Structural Changes |
StructFDR | False Discovery Control Procedure Integrating the Prior Structure Information |
structree | Tree-Structured Clustering |
StructureMC | Structured Matrix Completion |
strvalidator | Process Control and Internal Validation of Forensic STR Kits |
stsm | Structural Time Series Models |
stsm.class | Class and Methods for Structural Time Series Models |
stuart | Subtests Using Algorithmic Rummaging Techniques |
stubthat | Stubbing Framework for R |
studentlife | Tidy Handling and Navigation of the Student-Life Dataset |
studyStrap | Study Strap and Multi-Study Learning Algorithms |
stUPscales | Spatio-Temporal Uncertainty Propagation Across Multiple Scales |
STV | Single Transferable Vote Counting |
StVAR | Student's t Vector Autoregression (StVAR) |
styler | Non-Invasive Pretty Printing of R Code |
stylest | Estimating Speaker Style Distinctiveness |
stylo | Stylometric Multivariate Analyses |
subcopem2D | Bivariate Empirical Subcopula |
SubCultCon | Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures |
subdetect | Detect Subgroup with an Enhanced Treatment Effect |
subformula | Create Subformulas of a Formula |
subgroup | Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials |
SubgrpID | Patient Subgroup Identification for Clinical Drug Development |
SubgrPlots | Graphical Displays for Subgroup Analysis in Clinical Trials |
subgxe | Combine Multiple GWAS by Using Gene-Environment Interactions |
sublime | Automatic Lesion Incidence Estimation and Detection using Multi-Modality Longitudinal Magnetic Resonance Images |
submax | Effect Modification in Observational Studies Using the Submax Method |
subniche | Within Outlying Mean Indexes: Refining the OMI Analysis |
SubpathwayGMir | Identify Metabolic Subpathways Mediated by MicroRNAs |
SubpathwayLNCE | Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory |
subplex | Unconstrained Optimization using the Subplex Algorithm |
subrank | Computes Copula using Ranks and Subsampling |
subsamp | Subsample Winner Algorithm for Variable Selection in Linear Regression with a Large Number of Variables |
subscore | Computing Subscores in Classical Test Theory and Item Response Theory |
subscreen | Systematic Screening of Study Data for Subgroup Effects |
subselect | Selecting Variable Subsets |
subspace | Interface to OpenSubspace |
SubTite | Subgroup Specific Optimal Dose Assignment |
subtype | Cluster analysis to find molecular subtypes and their assessment |
SubtypeDrug | Prioritization of Candidate Cancer Subtype Specific Drugs |
SubVis | Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices |
suddengains | Identify Sudden Gains in Longitudinal Data |
sudoku | Sudoku Puzzle Generator and Solver |
sudokuAlt | Tools for Making and Spoiling Sudoku Games |
SUE | Subsampling method |
sugrrants | Supporting Graphs for Analysing Time Series |
sumFREGAT | Fast Region-Based Association Tests on Summary Statistics |
summariser | Easy Calculation and Visualisation of Confidence Intervals |
SummaryLasso | Building Polygenic Risk Score Using GWAS Summary Statistics |
summarytools | Tools to Quickly and Neatly Summarize Data |
SUMMER | Spatio-Temporal Under-Five Mortality Methods for Estimation |
sunburstR | Sunburst 'Htmlwidget' |
suncalc | Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase |
Sunclarco | Survival Analysis using Copulas |
Sunder | Quantification of the effect of geographic versus environmental isolation on genetic differentiation |
sundialr | An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers |
SunsVoc | Constructing Suns-Voc from Outdoor Time-Series I-V Curves |
SunterSampling | Sunter's sampling design |
supc | The Self-Updating Process Clustering Algorithms |
supclust | Supervised Clustering of Predictor Variables such as Genes |
supcluster | Supervised Cluster Analysis |
superbiclust | Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering) |
superdiag | R Code for Testing Markov Chain Nonconvergence |
SuperExactTest | Exact Test and Visualization of Multi-Set Intersections |
SuperGauss | Superfast Likelihood Inference for Stationary Gaussian Time Series |
superheat | A Graphical Tool for Exploring Complex Datasets Using Heatmaps |
SuperLearner | Super Learner Prediction |
superMDS | Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011) |
superml | Build Machine Learning Models Like Using Python's Scikit-Learn Library in R |
supernova | Judd, McClelland, & Ryan Formatting for ANOVA Output |
superpc | Supervised principal components |
SuperPCA | Supervised Principal Component Analysis |
SuperpixelImageSegmentation | Superpixel Image Segmentation |
Superpower | Simulation-Based Power Analysis for Factorial Designs |
SuperRanker | Sequential Rank Agreement |
supervisedPRIM | Supervised Classification Learning and Prediction using Patient Rule Induction Method (PRIM) |
SupMZ | Detecting Structural Change with Heteroskedasticity |
suppdata | Downloading Supplementary Data from Published Manuscripts |
SuppDists | Supplementary Distributions |
support.BWS | Tools for Case 1 Best-Worst Scaling |
support.BWS2 | Tools for Case 2 Best-Worst Scaling |
support.BWS3 | Tools for Case 3 Best-Worst Scaling |
support.CEs | Basic Functions for Supporting an Implementation of Choice Experiments |
supportInt | Calculates Likelihood Support Intervals for Common Data Types |
supreme | Modeling Tool for 'Shiny' Applications Developed with Modules |
sur | Companion to "Statistics Using R: An Integrative Approach" |
surbayes | Bayesian Analysis of Seemingly Unrelated Regression Models |
sure | Surrogate Residuals for Ordinal and General Regression Models |
SurfaceTortoise | Find Optimal Sampling Locations Based on Spatial Covariate(s) |
Surrogate | Evaluation of Surrogate Endpoints in Clinical Trials |
SurrogateOutcome | Estimation of the Proportion of Treatment Effect Explained by Surrogate Outcome Information |
SurrogateTest | Early Testing for a Treatment Effect using Surrogate Marker Information |
surrosurv | Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses |
surrosurvROC | Surrogate Survival ROC |
suRtex | LaTeX descriptive statistic reporting for survey data |
surv2sampleComp | Inference for Model-Free Between-Group Parameters for Censored Survival Data |
survAUC | Estimators of prediction accuracy for time-to-event data |
survAWKMT2 | Two-Sample Tests Based on Differences of Kaplan-Meier Curves |
SurvBoost | Gradient Boosting for Survival Data |
survBootOutliers | Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis |
survC1 | C-statistics for risk prediction models with censored survival data |
SurvCorr | Correlation of Bivariate Survival Times |
survCurve | Plots Survival Curves Element by Element |
SurvDisc | Discrete Time Survival and Longitudinal Data Analysis |
surveillance | Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena |
survELtest | Comparing Multiple Survival Functions with Crossing Hazards |
survexp.fr | Relative survival, AER and SMR based on French death rates |
survey | Analysis of Complex Survey Samples |
surveybootstrap | Tools for the Bootstrap with Survey Data |
surveydata | Tools to Work with Survey Data |
surveyeditor | Generate a Survey that can be Completed by Survey Respondents |
surveyoutliers | Helps Manage Outliers in Sample Surveys |
surveyplanning | Survey Planning Tools |
surveysd | Survey Standard Error Estimation for Cumulated Estimates and their Differences in Complex Panel Designs |
Survgini | The Gini concentration test for survival data |
SurvGSD | Group Sequential Design for a Clinical Trial with Censored Survival Data |
survHE | Survival Analysis in Health Economic Evaluation |
survIDINRI | IDI and NRI for comparing competing risk prediction models with censored survival data |
survidm | Inference and Prediction in an Illness-Death Model |
survival | Survival Analysis |
survivalAnalysis | High-Level Interface for Survival Analysis and Associated Plots |
survivalMPL | Penalised Maximum Likelihood for Survival Analysis Models |
survivalROC | Time-dependent ROC curve estimation from censored survival data |
survivalsvm | Survival Support Vector Analysis |
survJamda | Survival Prediction by Joint Analysis of Microarray Gene Expression Data |
survJamda.data | Data for Package 'survJambda' |
SurvLong | Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates |
SurvMI | Multiple Imputation Method in Survival Analysis |
survminer | Drawing Survival Curves using 'ggplot2' |
survMisc | Miscellaneous Functions for Survival Data |
survParamSim | Parametric Survival Simulation with Parameter Uncertainty |
survPen | Multidimensional Penalized Splines for Survival and Net Survival Models |
survPresmooth | Presmoothed Estimation in Survival Analysis |
SurvRegCensCov | Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate |
survRM2 | Comparing Restricted Mean Survival Time |
survRM2adapt | Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times |
survRM2perm | Permutation Test for Comparing Restricted Mean Survival Time |
survSens | Sensitivity Analysis with Time-to-Event Outcomes |
survsim | Simulation of Simple and Complex Survival Data |
survSNP | Power Calculations for SNP Studies with Censored Outcomes |
survtmle | Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings |
SurvTrunc | Analysis of Doubly Truncated Data |
sutteForecastR | Forecasting Data using Alpha-Sutte Indicator |
sValues | Measures of the Sturdiness of Regression Coefficients |
svars | Data-Driven Identification of SVAR Models |
svcm | 2d and 3d Space-Varying Coefficient Models |
svd | Interfaces to Various State-of-Art SVD and Eigensolvers |
svDialogs | 'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes |
svDialogstcltk | SciViews GUI API - Dialog boxes using Tcl/Tk |
svdvisual | SVD visualization tools |
svenssonm | Svensson's Method |
svglite | An 'SVG' Graphics Device |
svgPanZoom | R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic |
svGUI | SciViews - Manage GUIs in R |
svgViewR | 3D Animated Interactive Visualizations Using SVG |
svHttp | SciViews GUI API - R HTTP server |
svIDE | Functions to Ease Interactions Between R and IDE or Code Editors |
svKomodo | SciViews GUI API - Functions to interface with Komodo Edit/IDE |
svMisc | SciViews - Miscellaneous Functions |
SVMMaj | Implementation of the SVM-Maj Algorithm |
SVMMatch | Causal Effect Estimation and Diagnostics with Support Vector Machines |
svmpath | The SVM Path Algorithm |
svmplus | Implementation of Support Vector Machines Plus (SVM+) |
SVN | Statistically Validated Networks |
svrpath | The SVR Path Algorithm |
svs | Tools for Semantic Vector Spaces |
svSocket | 'SciViews' - Socket Server |
svSweave | SciViews GUI API - Sweave functions |
svTools | Wrappers for Tools in Other Packages for IDE Friendliness |
svUnit | 'SciViews' - Unit, Integration and System Testing |
svWidgets | Management of GUI Widgets, Windows, and Other GUI Resources |
svydiags | Linear Regression Model Diagnostics for Survey Data |
SvyNom | Nomograms for Right-Censored Outcomes from Survey Designs |
svyPVpack | A package for complex surveys including plausible values |
swa | Subsampling Winner Algorithm for Classification |
swagger | Dynamically Generates Documentation from a 'Swagger' Compliant API |
swamp | Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations |
swapClass | A Null Model Adapted to Abundance Class Data in Ecology |
SwarmSVM | Ensemble Learning Algorithms Based on Support Vector Machines |
swatches | Read, Inspect, and Manipulate Color Swatch Files |
swCRTdesign | Stepped Wedge Cluster Randomized Trial (SW CRT) Design |
swdft | Sliding Window Discrete Fourier Transform (SWDFT) |
sweep | Tidy Tools for Forecasting |
sweidnumbr | Handling of Swedish Identity Numbers |
swephR | High Precision Swiss Ephemeris |
swfscDAS | Southwest Fisheries Science Center Shipboard DAS Data Processing |
swfscMisc | Miscellaneous Functions for Southwest Fisheries Science Center |
swgee | Simulation Extrapolation Inverse Probability Weighted Generalized Estimating Equations |
SWIM | Scenario Weights for Importance Measurement |
SwimmeR | Data Import, Cleaning, and Conversions for Swimming Results |
swirl | Learn R, in R |
swirlify | A Toolbox for Writing 'swirl' Courses |
SwissAir | Air Quality Data of Switzerland for One Year in 30 Min Resolution |
swissdd | Get Swiss Federal and Cantonal Vote Results from Opendata.swiss |
swissMrP | Multilevel Regression with Post-Stratification (MrP) for Switzerland |
swissparl | Interface to the Webservices of the Swiss Parliament |
switchcase | A Simple and Flexible Switch-Case Construct for the 'R' Language |
switchnpreg | Switching nonparametric regression models for a single curve and functional data |
switchr | Installing, Managing, and Switching Between Distinct Sets of Installed Packages |
swmmr | R Interface for US EPA's SWMM |
SWMPr | Retrieving, Organizing, and Analyzing Estuary Monitoring Data |
SWMPrExtension | Functions for Analyzing and Plotting Estuary Monitoring Data |
sybil | Efficient Constrained Based Modelling |
sybilccFBA | Cost Constrained Flux Balance Analysis (ccFBA): MetabOlic Modeling with ENzyme kineTics (MOMENT) |
sybilcycleFreeFlux | Cycle-Free Flux Balance Analysis (CycleFreeFlux) |
sybilDynFBA | Dynamic FBA : Dynamic Flux Balance Analysis |
sybilSBML | 'SBML' Integration in Package 'Sybil' |
sylcount | Syllable Counting and Readability Measurements |
syllabifyr | Syllabifier for CMU Dictionary Transcriptions |
sylly | Hyphenation and Syllable Counting for Text Analysis |
sylly.en | Language Support for 'sylly' Package: English |
sym.arma | Autoregressive and Moving Average Symmetric Models |
symbolicDA | Analysis of Symbolic Data |
symbols | Symbol plots |
symDMatrix | Partitioned Symmetric Matrices |
symengine | Interface to the 'SymEngine' Library |
symmetry | Testing for Symmetry of Data and Model Residuals |
symmoments | Symbolic Central and Noncentral Moments of the Multivariate Normal Distribution |
symSEM | Symbolic Computation for Structural Equation Models |
SymTS | Symmetric Tempered Stable Distributions |
syn | Creates Synonyms From Target Words |
synchronicity | Boost Mutex Functionality in R |
synchrony | Methods for Computing Spatial, Temporal, and Spatiotemporal Statistics |
SynchWave | Synchrosqueezed Wavelet Transform |
SyncMove | Subsample Temporal Data to Synchronal Events and Compute the MCI |
SyncRNG | A Synchronized Tausworthe RNG for R and Python |
SYNCSA | Analysis of Functional and Phylogenetic Patterns in Metacommunities |
SyNet | Inference and Analysis of Sympatry Networks |
synfd | Synthesize Dense or Sparse Functional Data/Snippets |
synlik | Synthetic Likelihood Methods for Intractable Likelihoods |
synoptReg | Synoptic Climate Classification and Spatial Regionalization of Environmental Data |
synRNASeqNet | Synthetic RNA-Seq Network Generation and Mutual Information Estimates |
syntaxr | An 'SPSS' Syntax Generator for Multi-Variable Manipulation |
Synth | Synthetic Control Group Method for Comparative Case Studies |
synthACS | Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data |
synthesisr | Import, Assemble, and Deduplicate Bibliographic Datasets |
synthpop | Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control |
SynthTools | Tools and Tests for Experiments with Partially Synthetic Data Sets |
sys | Powerful and Reliable Tools for Running System Commands in R |
SyScSelection | Systemic Scenario Selection for Stress Testing |
sysfonts | Loading Fonts into R |
sysid | System Identification in R |
syslognet | Send Log Messages to Remote 'syslog' Server |
systemfit | Estimating Systems of Simultaneous Equations |
systemfonts | System Native Font Finding |
SystemicR | Monitoring Systemic Risk |
systemicrisk | A Toolbox for Systemic Risk |
syt | Standard Young Tableaux |
syuzhet | Extracts Sentiment and Sentiment-Derived Plot Arcs from Text |
T2EQ | Functions for Applying the T^2-Test for Equivalence |
tab | Create Summary Tables for Statistical Reports |
Taba | Taba Robust Correlations |
taber | Split and Recombine Your Data |
tabit | Simple Tabulation Made Simple |
tablaxlsx | Write Formatted Tables in Excel Workbooks |
table.express | Build 'data.table' Expressions with Data Manipulation Verbs |
table1 | Tables of Descriptive Statistics in HTML |
Table1Heatmap | Table 1 Heatmap |
table1xls | Exports Reproducible Summary Tables to Multi-Tab Spreadsheet Files (.xls or .xlsx) |
TableHC | Higher Criticism Test of Two Frequency Counts Tables |
tableHTML | A Tool to Create HTML Tables |
tableMatrix | Combines 'data.table' and 'matrix' Classes |
TableMonster | Table Monster |
tableone | Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights |
tableplot | Represents tables as semi-graphic displays |
tablerDash | 'Tabler' API for 'Shiny' |
tables | Formula-Driven Table Generation |
tableschema.r | Table Schema 'Frictionless Data' |
TableToLongForm | Automatically Convert Hierarchical for-Human Tables to Machine-Readable LongForm Dataframes |
tabr | Music Notation Syntax, Manipulation, Analysis and Transcription in R |
tabshiftr | Reshape Disorganised Messy Data |
tabula | Analysis, Seriation and Visualization of Archaeological Count Data |
tabularaster | Tidy Tools for 'Raster' Data |
tabularmaps | Create Tile-Grid Geographical Maps |
tabulizer | Bindings for 'Tabula' PDF Table Extractor Library |
tabulizerjars | 'Java' .jar Files for 'tabulizer' |
tabulog | Parsing Semi-Structured Log Files into Tabular Format |
tabuSearch | Tabu Search Algorithm for Binary Configurations |
tacmagic | Positron Emission Tomography Time-Activity Curve Analysis |
tactile | New and Extended Plots, Methods, and Panel Functions for 'lattice' |
tadaatoolbox | Helpers for Data Analysis and Presentation Focused on Undergrad Psychology |
TAG | Transformed Additive Gaussian Processes |
tagcloud | Tag Clouds |
tailloss | Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution |
tailr | Automatic Tail Recursion Optimisation |
TailRank | The Tail-Rank Statistic |
taipan | Tool for Annotating Images in Preparation for Analysis |
takos | Analysis of Differential Calorimetry Scans |
TAM | Test Analysis Modules |
tanaka | Design Shaded Contour Lines (or Tanaka) Maps |
TanB | The TanB Distribution |
TANDEM | A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types |
tangles | Anonymization of Spatial Point Patterns and Raster Objects |
TangPoemR | Write Chinese Tang Poems |
tangram | The Grammar of Tables |
TaoTeProgramming | Illustrations from Tao Te Programming |
TapeR | Flexible Tree Taper Curves Based on Semiparametric Mixed Models |
tapkee | Wrapper for 'tapkee' Dimension Reduction Library |
TAQMNGR | Manage Tick-by-Tick Transaction Data |
TAR | Bayesian Modeling of Autoregressive Threshold Time Series Models |
targeted | Targeted Inference |
TargomoR | Interface to the 'Targomo' API |
Tariff | Replicate Tariff Method for Verbal Autopsy |
taRifx | Collection of Utility and Convenience Functions |
TAShiny | 'Text Analyzer Shiny' |
tashu | Analysis and Prediction of Bicycle Rental Amount |
taskscheduleR | Schedule R Scripts and Processes with the Windows Task Scheduler |
tatest | Two-Group Ta-Test |
tatoo | Combine and Export Data Frames |
tau | Text Analysis Utilities |
TauP.R | Earthquake Traveltime Calculations for 1-D Earth Models |
TauStar | Efficient Computation and Testing of the Bergsma-Dassios Sign Covariance |
tauturri | Get Data Out of 'Tautulli' (Formerly 'PlexPy') |
taxa | Taxonomic Classes |
taxadb | A High-Performance Local Taxonomic Database Interface |
TaxicabCA | Taxicab Correspondence Analysis |
taxize | Taxonomic Information from Around the Web |
taxizedb | Tools for Working with 'Taxonomic' Databases |
taxlist | Handling Taxonomic Lists |
taxonomizr | Functions to Work with NCBI Accessions and Taxonomy |
Taxonstand | Taxonomic Standardization of Plant Species Names |
taxotools | Tools to Handle Taxonomic Lists |
tbart | Teitz and Bart's p-Median Algorithm |
tbd | Estimation of Causal Effects with Outcomes Truncated by Death |
tbdiag | Functions for tuberculosis diagnostics research |
TBEST | Tree Branches Evaluated Statistically for Tightness |
TBFmultinomial | TBF Methodology Extension for Multinomial Outcomes |
tbl2xts | Convert Tibbles or Data Frames to Xts Easily |
tbm | Transformation Boosting Machines |
tbma | Tree-Based Moving Average Forecasting Model |
tboot | Tilted Bootstrap |
TBRDist | Rearrangement Distances Between Unrooted Phylogenetic Trees |
tbrf | Time-Based Rolling Functions |
TBSSurvival | Survival Analysis using a Transform-Both-Sides Model |
TCA | Tensor Composition Analysis |
tcensReg | MLE of a Truncated Normal Distribution with Censored Data |
tcftt | Two-Sample Tests for Skewed Data |
TCGAretriever | Retrieve Genomic and Clinical Data from TCGA |
TcGSA | Time-Course Gene Set Analysis |
tcgsaseq | Time-Course Gene Set Analysis for RNA-Seq Data |
TCIApathfinder | Client for the Cancer Imaging Archive REST API |
tcl | Testing in Conditional Likelihood Context |
tcltk2 | Tcl/Tk Additions |
tclust | Robust Trimmed Clustering |
Tcomp | Data from the 2010 Tourism Forecasting Competition |
tcpl | ToxCast Data Analysis Pipeline |
tcR | Advanced Data Analysis of Immune Receptor Repertoires |
TDA | Statistical Tools for Topological Data Analysis |
TDAmapper | Analyze High-Dimensional Data Using Discrete Morse Theory |
TDAstats | Pipeline for Topological Data Analysis |
TDboost | A Boosted Tweedie Compound Poisson Model |
TDCor | Gene Network Inference from Time-Series Transcriptomic Data |
TDD | Time-Domain Deconvolution of Seismometer Response |
tdigest | Wicked Fast, Accurate Quantiles Using t-Digests |
TDMR | Tuned Data Mining in R |
TDPanalysis | Granier's Sap Flow Sensors (TDP) Analysis |
tdr | Target Diagram |
tdROC | Nonparametric Estimation of Time-Dependent ROC Curve from Right Censored Survival Data |
tdsc | Time Domain Signal Coding |
tdthap | TDT Tests for Extended Haplotypes |
TE | Insertion/Deletion Dynamics for Transposable Elements |
tea | Threshold Estimation Approaches |
teachingApps | Apps for Teaching Statistics, R Programming, and Shiny App Development |
TeachingDemos | Demonstrations for Teaching and Learning |
TeachingSampling | Selection of Samples and Parameter Estimation in Finite Population |
TeachNet | Fits Neural Networks to Learn About Backpropagation |
tealeaves | Solve for Leaf Temperature Using Energy Balance |
TEAM | Multiple Hypothesis Testing on an Aggregation Tree Method |
teamcolors | Color Palettes for Pro Sports Teams |
teamr | Send Formatted Messages, Images and Objects to Microsoft 'Teams' |
teda | An Implementation of the Typicality and Eccentricity Data Analysis Framework |
teigen | Model-Based Clustering and Classification with the Multivariate t Distribution |
Tejapi | API Wrapper for Taiwan Economic Journal Data Service |
telefit | Estimation and Prediction for Remote Effects Spatial Process Models |
telegram | R Wrapper Around the Telegram Bot API |
telegram.bot | Develop a 'Telegram Bot' with R |
TELP | Social Representation Theory Application: The Free Evocation of Words Technique |
TempCont | Temporal Contributions on Trends using Mixed Models |
tempcyclesdata | Climate Data from Wang and Dillon |
tempdisagg | Methods for Temporal Disaggregation and Interpolation of Time Series |
temperatureresponse | Temperature Response |
templates | A System for Working with Templates |
tempoR | Characterizing Temporal Dysregulation |
Temporal | Parametric Time to Event Analysis |
tempR | Temporal Sensory Data Analysis |
Tendril | Compute and Display Tendril Plots |
tenispolaR | Provides ZENIT-POLAR Substitution Cipher Method of Encryption |
tensor | Tensor product of arrays |
tensorA | Advanced Tensor Arithmetic with Named Indices |
tensorBF | Bayesian Tensor Factorization |
tensorBSS | Blind Source Separation Methods for Tensor-Valued Observations |
tensorflow | R Interface to 'TensorFlow' |
tensorordinal | Tensor Noise Reduction and Completion Based on Ordinal Observations |
tensorr | Sparse Tensors in R |
tensorregress | Generalized Tensor Regression with Covariates on Multiple Modes |
tensorsparse | Multiway Clustering via Tensor Block Models |
tensr | Covariance Inference and Decompositions for Tensor Datasets |
TEQR | Target Equivalence Range Design |
TERAplusB | Test for A+B Traditional Escalation Rule |
tergm | Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models |
tergmLite | Fast Simulation of Simple Temporal Exponential Random Graph Models |
term | Create, Manipulate and Query Parameter Terms |
Ternary | Create Ternary Plots |
ternvis | Visualisation, Verification and Calibration of Ternary Probabilistic Forecasts |
terra | Spatial Data Analysis |
terrainmeshr | Triangulate and Simplify 3D Terrain Meshes |
TESS | Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events |
tesseract | Open Source OCR Engine |
test2norm | Normative Standards for Cognitive Tests |
testassay | A Hypothesis Testing Framework for Validating an Assay for Precision |
testcorr | Testing Zero Correlation |
TestDataImputation | Missing Item Responses Imputation for Test and Assessment Data |
TestDesign | Optimal Test Design Approach to Fixed and Adaptive Test Construction |
TestDimorph | Analysis Of The Interpopulation Difference In Degree of Sexual Dimorphism Using Summary Statistics |
testDriveR | Teaching Data for Statistics and Data Science |
testequavar | Bootstrap Tests for Equality of 2, 3, or 4 Population Variances |
tester | Tests and checks characteristics of R objects |
testextra | Extract Test Blocks |
testforDEP | Dependence Tests for Two Variables |
TestFunctions | Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms |
TestingSimilarity | Bootstrap Test for the Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation |
testit | A Simple Package for Testing R Packages |
TestScorer | GUI for Entering Test Items and Obtaining Raw and Transformed Scores |
testthat | Unit Testing for R |
testthis | Utils and 'RStudio' Addins to Make Testing Even More Fun |
tetraclasse | Satisfaction Analysis using Tetraclasse Model and Llosa Matrix |
TeXCheckR | Parses LaTeX Documents for Errors |
TexExamRandomizer | Personalizes and Randomizes Exams Written in 'LaTeX' |
texmex | Statistical Modelling of Extreme Values |
TexMix | Supporting Functions and Data for Geo-Spatial Analytics Courses at UTDallas, Texas |
TExPosition | Two-Table ExPosition |
texPreview | Compile and Preview Snippets of 'LaTeX' |
texreg | Conversion of R Regression Output to LaTeX or HTML Tables |
text.alignment | Text Alignment with Smith-Waterman |
text2speech | Text to Speech |
text2vec | Modern Text Mining Framework for R |
textcat | N-Gram Based Text Categorization |
textclean | Text Cleaning Tools |
textdata | Download and Load Various Text Datasets |
texteffect | Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects |
textfeatures | Extracts Features from Text |
TextForecast | Regression Analysis and Forecasting Using Textual Data from a Time-Varying Dictionary |
textgRid | Praat TextGrid Objects in R |
textile | Textile Images |
textir | Inverse Regression for Text Analysis |
textmineR | Functions for Text Mining and Topic Modeling |
textometry | Textual Data Analysis Package used by the TXM Software |
textplot | Text Plots |
textrank | Summarize Text by Ranking Sentences and Finding Keywords |
textreadr | Read Text Documents into R |
textrecipes | Extra 'Recipes' for Text Processing |
textreg | n-Gram Text Regression, aka Concise Comparative Summarization |
textreuse | Detect Text Reuse and Document Similarity |
textshape | Tools for Reshaping Text |
textstem | Tools for Stemming and Lemmatizing Text |
textTinyR | Text Processing for Small or Big Data Files |
textutils | Utilities for Handling Strings and Text |
tfaddons | Interface to 'TensorFlow SIG Addons' |
tfautograph | Autograph R for 'Tensorflow' |
tfCox | Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model |
tfdatasets | Interface to 'TensorFlow' Datasets |
tfdeploy | Deploy 'TensorFlow' Models |
tfer | Forensic Glass Transfer Probabilities |
tfestimators | Interface to 'TensorFlow' Estimators |
tfhub | Interface to 'TensorFlow' Hub |
tfio | Interface to 'TensorFlow IO' |
TFisher | Optimal Thresholding Fisher's P-Value Combination Method |
TFMPvalue | Efficient and Accurate P-Value Computation for Position Weight Matrices |
tfplot | Time Frame User Utilities |
tfprobability | Interface to 'TensorFlow Probability' |
tframe | Time Frame Coding Kernel |
tframePlus | Time Frame Coding Kernel Extensions |
tfruns | Training Run Tools for 'TensorFlow' |
tfse | Tools for Script Editing |
TFX | R API to TrueFX(tm) |
tgcd | Thermoluminescence Glow Curve Deconvolution |
tggd | The Standard Distribution Functions for the Truncated Generalised Gamma Distribution |
tgp | Bayesian Treed Gaussian Process Models |
tgram | Compute and Plot Tracheidograms |
TGS | Rapid Reconstruction of Time-Varying Gene Regulatory Networks |
TH.data | TH's Data Archive |
thankr | Find Out Who Maintains the Packages you Use |
ThankYouStars | Give your Dependencies Stars on GitHub! |
thectar | Hermeneutic Content Analysis |
theiaR | Download and Manage Data from Theia |
themetagenomics | Exploring Thematic Structure and Predicted Functionality of 16s rRNA Amplicon Data |
themis | Extra Recipes Steps for Dealing with Unbalanced Data |
Thermimage | Thermal Image Analysis |
ThermIndex | Calculate Thermal Indexes |
thermocouple | Temperature Measurement with Thermocouples, RTD and IC Sensors |
thgenetics | Genetic Rare Variants Tests |
thickmatch | Threshold Matching for Thick Description for Optimal Matching in Observational Studies |
thief | Temporal Hierarchical Forecasting |
Thinknum | Thinknum Data Connection |
thinkr | Tools for Cleaning Up Messy Files |
thor | Interface to 'LMDB' |
ThreeArmedTrials | Design and Analysis of Clinical Non-Inferiority or Superiority Trials with Active and Placebo Control |
threeboost | Thresholded variable selection and prediction based on estimating equations |
threeBrain | 3D Brain Visualization |
ThreeGroups | ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments |
threejs | Interactive 3D Scatter Plots, Networks and Globes |
ThreeWay | Three-Way Component Analysis |
ThreeWiseMonkeys | The Japanese Pictorial Maxim "See No Evil, Hear No Evil, Speak No Evil" |
threewords | Represent Precise Coordinates in Three Words |
threg | Threshold Regression |
thregI | Threshold Regression for Interval-Censored Data with a Cure Rate Option |
Thresher | Threshing and Reaping for Principal Components |
ThresholdROC | Optimum Threshold Estimation |
threshr | Threshold Selection and Uncertainty for Extreme Value Analysis |
thriftr | Apache Thrift Client Server |
thsls | Three-Stage Least Squares Estimation for Systems of Simultaneous Equations |
thurstonianIRT | Thurstonian IRT Models |
tibble | Simple Data Frames |
tibbletime | Time Aware Tibbles |
tibbrConnector | R Interface to TIBCO 'tibbr' |
TickExec | Execution Functions for Tick Data Back Test |
tictactoe | Tic-Tac-Toe Game |
tictoc | Functions for timing R scripts, as well as implementations of Stack and List structures |
TiddlyWikiR | Create dynamic reports using a TiddlyWiki template |
TideCurves | Analysis and Prediction of Tides |
TideHarmonics | Harmonic Analysis of Tides |
Tides | Quasi-Periodic Time Series Characteristics |
TideTables | Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides |
tidybayes | Tidy Data and 'Geoms' for Bayesian Models |
tidyBF | Tidy Wrapper for 'BayesFactor' Package |
tidyboot | Tidyverse-Compatible Bootstrapping |
tidycat | Expand Tidy Output for Categorical Parameter Estimates |
tidycensus | Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames |
tidycode | Analyze Lines of R Code the Tidy Way |
tidycomm | Data Modification and Analysis for Communication Research |
tidycwl | Tidy Common Workflow Language Tools and Workflows |
tidydice | Simulates Dice Rolls and Coin Flips |
tidyfast | Fast Tidying of Data |
tidyfst | Tidy Verbs for Fast Data Manipulation |
tidyft | Tidy Verbs for Fast Data Operations by Reference |
tidygapminder | Easily Tidy Gapminder Datasets |
tidygate | Add Gate Information to Your Tibble |
tidygenomics | Tidy Verbs for Dealing with Genomic Data Frames |
tidygeocoder | Geocoding Made Easy |
tidygeoRSS | Tidy GeoRSS |
tidygraph | A Tidy API for Graph Manipulation |
tidyHeatmap | A Tidy Implementation of Heatmap |
tidyhydat | Extract and Tidy Canadian 'Hydrometric' Data |
tidyjson | Tidy Complex 'JSON' |
tidylo | Weighted Tidy Log Odds Ratio |
tidylog | Logging for 'dplyr' and 'tidyr' Functions |
tidyLPA | Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software |
tidyMicro | A Pipeline for Microbiome Analysis and Visualization |
tidymodels | Easily Install and Load the 'Tidymodels' Packages |
tidymv | Tidy Model Visualisation for Generalised Additive Models |
tidync | A Tidy Approach to 'NetCDF' Data Exploration and Extraction |
tidypmc | Parse Full Text XML Documents from PubMed Central |
tidyposterior | Bayesian Analysis to Compare Models using Resampling Statistics |
tidypredict | Run Predictions Inside the Database |
tidyquant | Tidy Quantitative Financial Analysis |
tidyquery | Query 'R' Data Frames with 'SQL' |
tidyqwi | A Convenient API for Accessing United States Census Bureau's Quarterly Workforce Indicator |
tidyr | Tidy Messy Data |
tidyREDCap | Helper Functions for Working with REDCap Data |
tidyRSS | Tidy RSS for R |
tidyrules | Obtain Rules from Rule Based Models as Tidy Dataframe |
tidyselect | Select from a Set of Strings |
tidySEM | Tidy Structural Equation Modeling |
tidystats | Save Output of Statistical Tests |
tidystringdist | String Distance Calculation with Tidy Data Principles |
tidytable | Tidy Interface to 'data.table' |
tidytext | Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools |
tidytidbits | A Collection of Tools and Helpers Extending the Tidyverse |
tidytransit | Read, Validate, Analyze, and Map Files in the General Transit Feed Specification |
tidytree | A Tidy Tool for Phylogenetic Tree Data Manipulation |
tidytuesdayR | Access the Weekly 'TidyTuesday' Project Dataset |
tidyUSDA | A Minimal Tool Set for Gathering USDA Quick Stat Data for Analysis and Visualization |
tidyverse | Easily Install and Load the 'Tidyverse' |
tidyvpc | VPC Percentiles and Prediction Intervals |
tidyxl | Read Untidy Excel Files |
tiff | Read and write TIFF images |
tiger | TIme series of Grouped ERrors |
tigerhitteR | Pre-Process of Time Series Data Set in R |
tigerstats | R Functions for Elementary Statistics |
tigger | Infers Novel Immunoglobulin Alleles from Sequencing Data |
tightClust | Tight Clustering |
tigreBrowserWriter | 'tigreBrowser' Database Writer |
tigris | Load Census TIGER/Line Shapefiles |
tikzDevice | R Graphics Output in LaTeX Format |
tilegramsR | R Spatial Data for Tilegrams |
TileManager | Tile Manager |
tilemaps | Generate Tile Maps |
tiler | Create Geographic and Non-Geographic Map Tiles |
tilting | Variable Selection via Tilted Correlation Screening Algorithm |
time2event | Survival and Competing Risk Analyses with Time-to-Event Data as Covariates |
timechange | Efficient Changing of Date-Times |
timeDate | Rmetrics - Chronological and Calendar Objects |
timedelay | Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars |
timedeppar | Infer Constant and Stochastic, Time-Dependent Model Parameters |
timeline | Timelines for a Grammar of Graphics |
timelineR | Visualization for Time Series Data |
timelineS | Timeline and Time Duration-Related Tools |
timeordered | Time-Ordered and Time-Aggregated Network Analyses |
timeperiodsR | Simple Definition Of Time Intervals |
TimeProjection | Time Projections |
timeR | Time Your Codes |
timereg | Flexible Regression Models for Survival Data |
timeROC | Time-Dependent ROC Curve and AUC for Censored Survival Data |
timesboot | Bootstrap computations for time series objects |
timeSeq | Detecting Differentially Expressed Genes in Time Course RNA-Seq Data |
timeSeries | Financial Time Series Objects (Rmetrics) |
TimeSeries.OBeu | Time Series Analysis 'OpenBudgets.eu' |
timeseriesdb | Manage Time Series for Official Statistics with R and PostgreSQL |
timetk | A Tool Kit for Working with Time Series in R |
timetools | Seasonal/Sequential (Instants/Durations, Even or not) Time Series |
timetree | Interface to the TimeTree of Life Webpage |
timevis | Create Interactive Timeline Visualizations in R |
TimeVTree | Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach |
TimeWarp | Date Calculations and Manipulation |
timma | Target Inhibition Interaction using Maximization and Minimization Averaging |
TIMP | Fitting Separable Nonlinear Models in Spectroscopy and Microscopy |
timsac | Time Series Analysis and Control Package |
Tinflex | A Universal Non-Uniform Random Number Generator |
TInPosition | Inference Tests for TExPosition |
tinsel | Transform Functions using Decorators |
tint | 'tint' is not 'Tufte' |
tinter | Generate a Monochromatic Palette |
tinyProject | A Lightweight Template for Data Analysis Projects |
tinytest | Lightweight and Feature Complete Unit Testing Framework |
tinytex | Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents |
tiobeindexr | Extract 'TIOBE' Programming Index Tables for the Latest Month |
TipDatingBeast | Using Tip Dates with Phylogenetic Trees in BEAST |
tipom | Automated measure-based classification for flint tools |
tippy | Add Tooltips to 'R markdown' Documents or 'Shiny' Apps |
tipr | Tipping Point Analyses |
tis | Time Indexes and Time Indexed Series |
titan | Titration analysis for mass spectrometry data |
TITAN2 | Threshold Indicator Taxa Analysis |
titanic | Titanic Passenger Survival Data Set |
titeIR | Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities |
titrationCurves | Acid/Base, Complexation, Redox, and Precipitation Titration Curves |
tkrgl | Deprecated 'TK' Widget Tools for 'rgl' |
tkrplot | TK Rplot |
tkRplotR | Display Resizable Plots |
Tlasso | Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models |
TLBC | Two-Level Behavior Classification |
tlemix | Trimmed Maximum Likelihood Estimation |
tlm | Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables |
tlmec | Linear Student-t Mixed-Effects Models with Censored Data |
TLMoments | Calculate TL-Moments and Convert Them to Distribution Parameters |
tlrmvnmvt | Low-Rank Methods for MVN and MVT Probabilities |
tls | Tools of Total Least Squares in Error-in-Variables Models |
tm | Text Mining Package |
tm.plugin.alceste | Import texts from files in the Alceste format using the tm text mining framework |
tm.plugin.dc | Text Mining Distributed Corpus Plug-In |
tm.plugin.europresse | Import Articles from 'Europresse' Using the 'tm' Text Mining Framework |
tm.plugin.factiva | Import Articles from 'Factiva' Using the 'tm' Text Mining Framework |
tm.plugin.lexisnexis | Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework |
tm.plugin.mail | Text Mining E-Mail Plug-in |
tm.plugin.webmining | Retrieve Structured, Textual Data from Various Web Sources |
tm1r | The Integration Between 'IBM COGNOS TM1' and R |
tmap | Thematic Maps |
tmaptools | Thematic Map Tools |
TMB | Template Model Builder: A General Random Effect Tool Inspired by 'ADMB' |
tmbstan | MCMC Sampling from 'TMB' Model Object using 'Stan' |
TmCalculator | Melting Temperature of Nucleic Acid Sequences |
tmcn | A Text Mining Toolkit for Chinese |
TMDb | Access to TMDb API |
tmg | Truncated Multivariate Gaussian Sampling |
Tmisc | Turner Miscellaneous |
tmle | Targeted Maximum Likelihood Estimation |
tmle.npvi | Targeted Learning of a NP Importance of a Continuous Exposure |
tmod | Feature Set Enrichment Analysis for Metabolomics and Transcriptomics |
tmpm | Trauma Mortality Prediction Model |
tmt | Estimation of the Rasch Model for Multistage Tests |
tmuxr | Manage 'tmux' Sessions, Windows, and Panes |
tmvmixnorm | Sampling from Truncated Multivariate Normal and t Distributions |
tmvnsim | Truncated Multivariate Normal Simulation |
tmvtnorm | Truncated Multivariate Normal and Student t Distribution |
TNC | Temporal Network Centrality (TNC) Measures |
tnet | Weighted, Two-Mode, and Longitudinal Networks Analysis |
Tnseq | Identification of Conditionally Essential Genes in Transposon Sequencing Studies |
TOC | Total Operating Characteristic Curve and ROC Curve |
todor | Find All TODO Comments and More |
togglr | 'Toggl.com' Api for 'Rstudio' |
TOHM | Testing One Hypothesis Multiple Times |
tokenbrowser | Create Full Text Browsers from Annotated Token Lists |
tokenizers | Fast, Consistent Tokenization of Natural Language Text |
tokenizers.bpe | Byte Pair Encoding Text Tokenization |
tolerance | Statistical Tolerance Intervals and Regions |
toolmaRk | Tests for Same-Source of Toolmarks |
tools4uplift | Tools for Uplift Modeling |
ToolsForCoDa | Multivariate Tools for Compositional Data Analysis |
TooManyCellsR | An R Wrapper for 'TooManyCells' |
toOrdinal | Cardinal to Ordinal Number & Date Conversion |
topicdoc | Topic-Specific Diagnostics for LDA and CTM Topic Models |
topicmodels | Topic Models |
TopicScore | The Topic SCORE Algorithm to Fit Topic Models |
TopKLists | Inference, Aggregation and Visualization for Top-K Ranked Lists |
topmodel | Implementation of the Hydrological Model TOPMODEL in R |
topoDistance | Calculating Topographic Paths and Distances |
topologyGSA | Gene Set Analysis Exploiting Pathway Topology |
topsis | TOPSIS method for multiple-criteria decision making (MCDM) |
tor | Import Multiple Files From a Single Directory at Once |
torch | Tensors and Neural Networks with 'GPU' Acceleration |
tosca | Tools for Statistical Content Analysis |
tosls | Instrumental Variables Two Stage Least Squares estimation |
TOSTER | Two One-Sided Tests (TOST) Equivalence Testing |
totalcensus | Extract Decennial Census and American Community Survey Data |
TotalCopheneticIndex | An R Package to Quantify Tree Balance |
touch | Tools of Utilization and Cost in Healthcare |
touchard | Touchard Model and Regression |
TouRnament | Tools for Sports Competitions |
tourr | Implement Tour Methods in R Code |
toxEval | Exploring Biological Relevance of Environmental Chemistry Observations |
toxtestD | Experimental design for binary toxicity tests |
TP.idm | Estimation of Transition Probabilities for the Illness-Death Model |
tpAUC | Estimation and Inference of Two-Way pAUC, pAUC and pODC |
TPD | Methods for Measuring Functional Diversity Based on Trait Probability Density |
tpe | Tree preserving embedding |
TPEA | A Novel Topology-Based Pathway Enrichment Analysis Approach |
TPES | Tumor Purity Estimation using SNVs |
TPmsm | Estimation of Transition Probabilities in Multistate Models |
tpr | Temporal Process Regression |
TR8 | A Tool for Downloading Functional Traits Data for Plant Species |
tracer | Slick Call Stacks |
tracerer | Tracer from R |
tracheideR | Standardize Tracheidograms |
track | Store Objects on Disk Automatically |
trackdem | Particle Tracking and Demography |
trackdf | Data Frame Class for Tracking Data |
trackeR | Infrastructure for Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
trackeRapp | Interface for the Analysis of Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
trackr | Semantic Annotation and Discoverability System for R-Based Artifacts |
TrackReconstruction | Reconstruct Animal Tracks from Magnetometer, Accelerometer, Depth and Optional Speed Data |
tractor.base | Read, Manipulate and Visualise Magnetic Resonance Images |
trade | Tools for Trade Practitioners |
TRADER | Tree Ring Analysis of Disturbance Events in R |
tradestatistics | Open Trade Statistics API Wrapper and Utility Program |
Trading | CCR, Entropy-Based Correlation Estimates & Dynamic Beta |
TrafficBDE | Traffic Status Prediction in Urban Places using Neural Network Models |
trafo | Estimation, Comparison and Selection of Transformations |
traineR | Predictive Models Homologator |
traipse | Shared Tools for Tracking Data |
traitdataform | Formatting and Harmonizing Ecological Trait-Data |
traits | Species Trait Data from Around the Web |
traj | Trajectory Analysis |
TrajDataMining | Trajectories Data Mining |
trajectories | Classes and Methods for Trajectory Data |
trajr | Animal Trajectory Analysis |
tram | Transformation Models |
TraMineR | Trajectory Miner: a Toolbox for Exploring and Rendering Sequences |
TraMineRextras | TraMineR Extension |
tramME | Transformation Models with Mixed Effects |
tramnet | Penalized Transformation Models |
TRAMPR | 'TRFLP' Analysis and Matching Package for R |
transcribeR | Automated Transcription of Audio Files Through the HP IDOL API |
transformmos | Transform MOS Values to be Robust for using Rank Based Statistics |
transformr | Polygon and Path Transformations |
translate | Bindings for the Google Translate API v2 |
translateR | Bindings for the Google and Microsoft Translation APIs |
translation.ko | R Manuals Literally Translated in Korean |
transmem | Treatment of Membrane-Transport Data |
TransModel | Fit Linear Transformation Models for Right Censored Data |
TransP | Implementation of Transportation Problem Algorithms |
TransPhylo | Inference of Transmission Tree from a Dated Phylogeny |
transplantr | Audit and Research Functions for Transplantation |
transport | Computation of Optimal Transport Plans and Wasserstein Distances |
tranSurv | Estimating a Survival Distribution in the Presence of Dependent Left Truncation and Right Censoring |
trapezoid | The Trapezoidal Distribution |
TRD | Transmission Ratio Distortion |
TreatmentSelection | Evaluate Treatment Selection Biomarkers |
tree | Classification and Regression Trees |
tree.interpreter | Random Forest Prediction Decomposition and Feature Importance Measure |
treebase | Discovery, Access and Manipulation of 'TreeBASE' Phylogenies |
TreeBUGS | Hierarchical Multinomial Processing Tree Modeling |
treeclim | Numerical Calibration of Proxy-Climate Relationships |
treeClust | Cluster Distances Through Trees |
treecm | Centre of Mass Assessment and Consolidation of Trees |
treeDA | Tree-Based Discriminant Analysis |
treedater | Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation |
TreeDep | Air Pollution Removal by Dry Deposition on Trees |
TreeDist | Distances Between Phylogenetic Trees |
treefit | The First Software for Quantitative Trajectory Inference |
treeheatr | Heatmap-Integrated Decision Tree Visualizations |
treeHMM | Tree Structured Hidden Markov Model |
treelet | An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data |
treeman | Phylogenetic Tree Manipulation Class and Methods |
treemap | Treemap Visualization |
treemapify | Draw Treemaps in 'ggplot2' |
treenomial | Comparison of Trees using a Tree Defining Polynomial |
TreePar | Estimating birth and death rates based on phylogenies |
treeperm | Exact and Asymptotic K Sample Permutation Test |
TreeSearch | Phylogenetic Tree Search Using Custom Optimality Criteria |
TreeSim | Simulating Phylogenetic Trees |
TreeSimGM | Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model |
treespace | Statistical Exploration of Landscapes of Phylogenetic Trees |
treestartr | Generate Starting Trees for Combined Molecular, Morphological and Stratigraphic Data |
treestructure | Detect Population Structure Within Phylogenetic Trees |
TreeTools | Create, Modify and Analyse Phylogenetic Trees |
trekcolors | Star Trek Color Palettes |
trekfont | Star Trek Fonts Collection |
trelliscopejs | Create Interactive Trelliscope Displays |
trelloR | R API for Trello |
trend | Non-Parametric Trend Tests and Change-Point Detection |
trendchange | Innovative Trend Analysis and Time-Series Change Point Analysis |
TrendInTrend | Odds Ratio Estimation and Power Calculation for the Trend in Trend Model |
trendsegmentR | Linear Trend Segmentation and Point Anomaly Detection |
TrendSLR | Estimating Trend, Velocity and Acceleration from Sea Level Records |
trendyy | A Tidy Wrapper Around 'gtrendsR' |
TRES | Tensor Regression with Envelope Structure and Three Generic Envelope Estimation Approaches |
TriadSim | Simulating Triad Genomewide Genotypes |
trialr | Clinical Trial Designs in 'rstan' |
TrialSize | R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research |
triangle | Provides the Standard Distribution Functions for the Triangle Distribution |
triangulation | Determine Position of Observer |
tribe | Play with the Tribe of Attributes |
tricolore | A Flexible Color Scale for Ternary Compositions |
triebeard | 'Radix' Trees in 'Rcpp' |
trigpoints | Data Set of Trig Points in Great Britain in British National Grid Coordinates |
TriMatch | Propensity Score Matching of Non-Binary Treatments |
trimcluster | Cluster Analysis with Trimming |
trimmer | Trim an Object |
trimr | An Implementation of Common Response Time Trimming Methods |
trimTrees | Trimmed opinion pools of trees in a random forest |
trinROC | Statistical Tests for Assessing Trinormal ROC Data |
trioGxE | A data smoothing approach to explore and test gene-environment interaction in case-parent trio data |
TrioSGL | Trio Model with a Combination of Lasso and Group Lasso Regularization |
trip | Tools for the Analysis of Animal Track Data |
tripack | Triangulation of Irregularly Spaced Data |
tripEstimation | Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes |
TripleR | Social Relation Model (SRM) Analyses for Single or Multiple Groups |
triplot | Explaining Correlated Features in Machine Learning Models |
tripsAndDipR | Identification of 2n and 3n Samples from Amplicon Sequencing Data |
triversity | Diversity Measures on Tripartite Graphs |
tropAlgebra | Tropical Algebraic Functions |
TropFishR | Tropical Fisheries Analysis |
tRophicPosition | Bayesian Trophic Position Calculation with Stable Isotopes |
tropicalSparse | Sparse Tropical Algebra |
trotter | Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector |
trtf | Transformation Trees and Forests |
truelies | Bayesian Methods to Estimate the Proportion of Liars in Coin Flip Experiments |
trueskill | Implementation the TrueSkill algorithm in R |
TruncatedNormal | Truncated Multivariate Normal and Student Distributions |
truncdist | Truncated Random Variables |
truncgof | GoF tests allowing for left truncated data |
truncnorm | Truncated Normal Distribution |
truncreg | Truncated Gaussian Regression Models |
truncSP | Semi-parametric estimators of truncated regression models |
trundler | Historical Retail Data from the 'Trundler' API |
trust | Trust Region Optimization |
trustedtimestamping | Create Trusted Timestamps of Datasets and Files |
trustOptim | Trust Region Optimization for Nonlinear Functions with Sparse Hessians |
tryCatchLog | Advanced 'tryCatch()' and 'try()' Functions |
tsallisqexp | Tsallis q-Exp Distribution |
tsapp | Time Series, Analysis and Application |
tsbox | Class-Agnostic Time Series |
tsBSS | Blind Source Separation and Supervised Dimension Reduction for Time Series |
tsc | Likelihood-ratio Tests for Two-Sample Comparisons |
TSclust | Time Series Clustering Utilities |
TScompare | 'TSdbi' Database Comparison |
tscount | Analysis of Count Time Series |
TSCS | Time Series Cointegrated System |
TSdata | 'TSdbi' Illustration |
tsdb | Terribly-Simple Data Base for Time Series |
TSdbi | Time Series Database Interface |
tsdecomp | Decomposition of Time Series Data |
tsdf | Two-/Three-Stage Designs for Phase 1&2 Clinical Trials |
TSDFGS | Training Set Determination for Genomic Selection |
tsdisagg2 | Time Series Disaggregation |
TSDT | Treatment-Specific Subgroup Detection Tool |
tsDyn | Nonlinear Time Series Models with Regime Switching |
TSE | Total Survey Error |
TSEind | Total Survey Error (Independent Samples) |
TSEntropies | Time Series Entropies |
tseries | Time Series Analysis and Computational Finance |
tseriesChaos | Analysis of Nonlinear Time Series |
tseriesEntropy | Entropy Based Analysis and Tests for Time Series |
TSeriesMMA | Multiscale Multifractal Analysis of Time Series Data |
TSEtools | Download and Manage Data from Tehran Stock Exchange |
TSEwgt | Total Survey Error Under Multiple, Different Weighting Schemes |
TSF | Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break |
tsfa | Time Series Factor Analysis |
TSfame | 'TSdbi' Extensions for Fame |
tsfeatures | Time Series Feature Extraction |
tsfgrnn | Time Series Forecasting Using GRNN |
tsfknn | Time Series Forecasting Using Nearest Neighbors |
TSGSIS | Two Stage-Grouped Sure Independence Screening |
tsgui | Gui for Simulating Time Series |
TSHRC | Two Stage Hazard Rate Comparison |
tsibble | Tidy Temporal Data Frames and Tools |
tsibbledata | Diverse Datasets for 'tsibble' |
tsintermittent | Intermittent Time Series Forecasting |
tsiR | An Implementation of the TSIR Model |
TSMCP | Fast Two Stage Multiple Change Point Detection |
TSMining | Mining Univariate and Multivariate Motifs in Time-Series Data |
TSmisc | 'TSdbi' Extensions to Wrap Miscellaneous Data Sources |
TSMN | Truncated Scale Mixtures of Normal Distributions |
tsModel | Time Series Modeling for Air Pollution and Health |
tsmp | Time Series with Matrix Profile |
TSMSN | Truncated Scale Mixtures of Skew-Normal Distributions |
TSMySQL | 'TSdbi' Extensions for 'MySQL' |
tsna | Tools for Temporal Social Network Analysis |
tsne | T-Distributed Stochastic Neighbor Embedding for R (t-SNE) |
TSodbc | 'TSdbi' Extensions for ODBC |
tsoutliers | Detection of Outliers in Time Series |
TSP | Traveling Salesperson Problem (TSP) |
Tsphere | Transposable Sphering for Large-Scale Inference with Correlated Data |
tsPI | Improved Prediction Intervals for ARIMA Processes and Structural Time Series |
tspmeta | Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem |
TSPostgreSQL | 'TSdbi' Extensions for 'PostgreSQL' |
TSPred | Functions for Benchmarking Time Series Prediction |
tsqn | Applications of the Qn Estimator to Time Series (Univariate and Multivariate) |
TSrepr | Time Series Representations |
tsriadditive | Two Stage Residual Inclusion Additive Hazards Estimator |
TSS.RESTREND | Time Series Segmentation of Residual Trends |
TSsdmx | 'TSdbi' Extension to Connect with 'SDMX' |
tsSelect | Execution of Time Series Models |
TSsmoothing | Trend Estimation of Univariate and Bivariate Time Series with Controlled Smoothness |
TSsql | Generic SQL Helper Functions for 'TSdbi' SQL Plugins |
TSSQLite | 'TSdbi' Extensions for 'SQLite' |
TSSS | Time Series Analysis with State Space Model |
TSstudio | Functions for Time Series Analysis and Forecasting |
tstools | A Time Series Toolbox for Official Statistics |
TSTr | Ternary Search Tree for Auto-Completion and Spell Checking |
TSTutorial | Fitting and Predict Time Series Interactive Laboratory |
tsutils | Time Series Exploration, Modelling and Forecasting |
TSVC | Tree-Structured Modelling of Varying Coefficients |
tsviz | Easy and Interactive Time Series Visualization |
tsvr | Timescale-Specific Variance Ratio for Use in Community Ecology |
tswge | Applied Time Series Analysis |
tsxtreme | Bayesian Modelling of Extremal Dependence in Time Series |
TTAinterfaceTrendAnalysis | Temporal Trend Analysis Graphical Interface |
ttbary | Barycenter Methods for Spatial Point Patterns |
ttbbeer | US Beer Statistics from TTB |
TTCA | Transcript Time Course Analysis |
ttdo | Extend 'tinytest' with 'diffobj' |
ttestshiny | Ttest Shiny |
tth | TeX-to-HTML/MathML Translators TtH/TtM |
TTmoment | Sampling and Calculating the First and Second Moments for the Doubly Truncated Multivariate t Distribution |
TTR | Technical Trading Rules |
TTS | Master Curve Estimates Corresponding to Time-Temperature Superposition |
ttScreening | Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples |
ttTensor | Tensor-Train Decomposition |
tttplot | Time to Target Plot |
ttutils | Utility functions |
ttwa | Travel To Work Area |
tuber | Client for the YouTube API |
tubern | R Client for the YouTube Analytics and Reporting API |
tuckerR.mmgg | Three-Mode Principal Components Analysis |
tufte | Tufte's Styles for R Markdown Documents |
tufterhandout | Tufte-style html document format for rmarkdown |
TukeyC | Conventional Tukey Test |
tukeytrend | Tukeys Trend Test via Multiple Marginal Models |
TULIP | A Toolbox for Linear Discriminant Analysis with Penalties |
tumblR | Access to Tumblr V2 API |
tumgr | Tumor Growth Rate Analysis |
tune | Tidy Tuning Tools |
TunePareto | Multi-Objective Parameter Tuning for Classifiers |
tuneR | Analysis of Music and Speech |
tuneRanger | Tune Random Forest of the 'ranger' Package |
tuple | Find every match, or orphan, duplicate, triplicate, or other replicated values |
turboEM | A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms |
turfR | TURF Analysis for R |
turner | Turn vectors and lists of vectors into indexed structures |
TurtleGraphics | Turtle Graphics |
Tushare | Interface to 'Tushare Pro' API |
tutorial | Convert R Markdown Files to DataCamp Light HTML Files |
tuts | Time Uncertain Time Series Analysis |
TUWmodel | Lumped/Semi-Distributed Hydrological Model for Education Purposes |
tvd | Total Variation Denoising |
tvgeom | The Time-Varying (Right-Truncated) Geometric Distribution |
tvm | Time Value of Money Functions |
TVMM | Multivariate Tests for the Vector of Means |
tvR | Total Variation Regularization |
tvReg | Time-Varying Coefficient for Single and Multi-Equation Regressions |
tvthemes | TV Show Themes and Color Palettes for 'ggplot2' Graphics |
twang | Toolkit for Weighting and Analysis of Nonequivalent Groups |
tweedie | Evaluation of Tweedie Exponential Family Models |
tweenr | Interpolate Data for Smooth Animations |
tweet2r | Twitter Collector for R and Export to 'SQLite', 'postGIS' and 'GIS' Format |
twfy | Drive the API for TheyWorkForYou |
twiddler | Interactive manipulation of R expressions |
twilio | An Interface to the Twilio API for R |
R Based Twitter Client | |
TwitterAutomatedTrading | Automated Trading Using Tweets |
twitterwidget | Render a Twitter Status in R Markdown Pages |
twl | Two-Way Latent Structure Clustering Model |
TwoCop | Nonparametric test of equality between two copulas |
TwoPhaseInd | Estimate Gene-Treatment Interaction Exploiting Randomization |
TwoRegression | Process Data from Wearable Research Devices Using Two-Regression Algorithms |
twosamples | Fast Permutation Based Two Sample Tests |
TwoSampleTest.HD | A Two-Sample Test for the Equality of Distributions for High-Dimensional Data |
twostageTE | Two-Stage Threshold Estimation |
TwoStepCLogit | Conditional Logistic Regression: A Two-Step Estimation Method |
twoway | Analysis of Two-Way Tables |
txtplot | Text Based Plots |
txtq | A Small Message Queue for Parallel Processes |
types | Type Annotations |
uaparserjs | Parse 'User-Agent' Strings |
uavRmp | UAV Mission Planner |
UBCRM | Functions to Simulate and Conduct Dose-Escalation Phase I Studies |
ubiquity | PKPD, PBPK, and Systems Pharmacology Modeling Tools |
UBL | An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks |
uCAREChemSuiteCLI | Resistome Predicter |
ucbthesis | UC Berkeley graduate division thesis template |
uchardet | The Universal Character Encoding Detector |
uclust | Clustering and Classification Inference with U-Statistics |
ucminf | General-Purpose Unconstrained Non-Linear Optimization |
UComp | Automatic Unobserved Components Models |
UCR.ColumnNames | Fixes Column Names for Uniform Crime Report "Offenses Known and Clearance by Arrest" Datasets |
UCSCXenaShiny | A Shiny App for UCSC Xena Database |
UCSCXenaTools | Download and Explore Datasets from UCSC Xena Data Hubs |
udapi | Urban Dictionary API Client |
UdderQuarterInfectionData | Udder Quarter Infection Data |
udpipe | Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit |
udunits2 | Udunits-2 Bindings for R |
ufs | Quantitative Analysis Made Accessible |
uFTIR | Process and Analyze Agilent Cary 620 FTIR Microscope Images |
uGMAR | Estimate Univariate Gaussian or Student's t Mixture Autoregressive Model |
uHMM | Construct an Unsupervised Hidden Markov Model |
ui | Uncertainty Intervals and Sensitivity Analysis for Missing Data |
uiucthemes | 'R' 'Markdown' Themes for 'UIUC' Documents and Presentations |
ukbabynames | UK Baby Names Data |
ukbtools | Manipulate and Explore UK Biobank Data |
ukgasapi | API for UK Gas Market Information |
UKgrid | The UK National Electricity Transmission System Dataset |
uklr | Client to United Kingdom Land Registry |
ukpolice | Download Data on UK Police and Crime |
ulid | Generate Universally Unique Lexicographically Sortable Identifiers |
Ultimixt | Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior |
umap | Uniform Manifold Approximation and Projection |
Umatrix | Visualization of Structures in High-Dimensional Data |
Umoments | Unbiased Central Moment Estimates |
ump | Uniformly Most Powerful Tests |
Umpire | Simulating Realistic Gene Expression and Clinical Data |
umx | Structural Equation and Twin Modeling in R |
unbalanced | Racing for Unbalanced Methods Selection |
unbalhaar | Function estimation via Unbalanced Haar wavelets |
UncDecomp | Uncertainty Decomposition |
UncertainInterval | Uncertain Interval Methods for Three-Way Cut-Point Determination in Test Results |
uncertainty | Uncertainty Estimation and Contribution Analysis |
UNCLES | Unification of Clustering Results from Multiple Datasets using External Specifications |
uncmbb | UNC Men's Basketball Match Results Since 1949-1950 Season |
understandBPMN | Calculator of Understandability Metrics for BPMN |
UNF | Tools for Creating Universal Numeric Fingerprints for Data |
unfoldr | Stereological Unfolding for Spheroidal Particles |
unglue | Extract Matched Substrings Using a Pattern |
ungroup | Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data |
unheadr | Handle Data with Messy Header Rows and Broken Values |
uniah | Unimodal Additive Hazards Model |
Unicode | Unicode Data and Utilities |
UniDOE | Uniform Design of Experiments |
unifDAG | Uniform Sampling of Directed Acyclic Graphs |
unifed | The Unifed Distribution |
UnifiedDoseFinding | Dose-Finding Methods for Non-Binary Outcomes |
uniformly | Uniform Sampling |
uniftest | Tests for Uniformity |
UniIsoRegression | Unimodal and Isotonic L1, L2 and Linf Regression |
unikn | Graphical Elements of the University of Konstanz's Corporate Design |
unine | Unine Light Stemmer |
UniprotR | Retrieving Information of Proteins from Uniprot |
uniqtag | Abbreviate Strings to Short, Unique Identifiers |
uniReg | Unimodal Penalized Spline Regression using B-Splines |
unisensR | Read 'Unisens' Data |
UnitCircle | Check if Roots of a Polynomial Lie Outside the Unit Circle |
unitedR | Assessment and Evaluation of Formations in United |
unitizer | Interactive R Unit Tests |
units | Measurement Units for R Vectors |
unittest | TAP-Compliant Unit Testing |
unival | Assessing Essential Unidimensionality Using External Validity Information |
univariateML | Maximum Likelihood Estimation for Univariate Densities |
universals | S3 Generics for Bayesian Analyses |
univOutl | Detection of Univariate Outliers |
UnivRNG | Univariate Pseudo-Random Number Generation |
unix | POSIX System Utilities |
unjoin | Separate a Data Frame by Normalization |
unmarked | Models for Data from Unmarked Animals |
UNPaC | Non-Parametric Cluster Significance Testing with Reference to a Unimodal Null Distribution |
unpivotr | Unpivot Complex and Irregular Data Layouts |
unrepx | Analysis and Graphics for Unreplicated Experiments |
unrtf | Extract Text from Rich Text Format (RTF) Documents |
unsystation | Stationarity Test Based on Unsystematic Sub-Sampling |
untb | Ecological Drift under the UNTB |
unvotes | United Nations General Assembly Voting Data |
updog | Flexible Genotyping for Polyploids |
uplift | Uplift Modeling |
uplifteval | Uplift Model Evaluation with Plots and Metrics |
UPMASK | Unsupervised Photometric Membership Assignment in Stellar Clusters |
upsetjs | 'HTMLWidget' Wrapper of 'UpSet.js' for Exploring Large Set Intersections |
UpSetR | A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets |
UPSvarApprox | Approximate the Variance of the Horvitz-Thompson Total Estimator |
uptasticsearch | Get Data Frame Representations of 'Elasticsearch' Results |
uptimeRobot | Access the UptimeRobot Ping API |
uqr | Unconditional Quantile Regression |
urca | Unit Root and Cointegration Tests for Time Series Data |
urlshorteneR | R Wrapper for the 'Bit.ly' and 'Is.gd'/'v.gd' URL Shortening Services |
urltools | Vectorised Tools for URL Handling and Parsing |
uroot | Unit Root Tests for Seasonal Time Series |
ursa | Non-Interactive Spatial Tools for Raster Processing and Visualization |
us.census.geoheader | US 2010 Census SF2 Geographic Header Summary Levels 010-050 |
usa | Updated US State Facts and Figures |
USAboundaries | Historical and Contemporary Boundaries of the United States of America |
UScancer | Create US cancer datasets from SEER, IARC, and US Census data |
UScensus2000cdp | US Census 2000 Designated Places Shapefiles and Additional Demographic Data |
UScensus2000tract | US Census 2000 Tract Level Shapefiles and Additional Demographic Data |
UScensus2010 | US Census 2010 Suite of R Packages |
usdampr | Request USDA MPR Historical Data via the 'LMR' API |
usdarnass | USDA NASS Quick Stats API |
usdata | Data on the States and Counties of the United States |
usdm | Uncertainty Analysis for Species Distribution Models |
usedist | Distance Matrix Utilities |
useful | A Collection of Handy, Useful Functions |
usefun | A Collection of Useful Functions by John |
userfriendlyscience | Quantitative Analysis Made Accessible |
usethis | Automate Package and Project Setup |
usfertilizer | County-Level Estimates of Fertilizer Application in USA |
USgrid | The Demand and Supply for Electricity in the US |
USGSstates2k | Replaced by 'states2k' – United States of America Map with the NAD 1983 Albers Projection |
ushr | Understanding Suppression of HIV |
UsingR | Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition |
uskewFactors | Model-Based Clustering via Mixtures of Unrestricted Skew-t Sactor Analyzer Models |
usl | Analyze System Scalability with the Universal Scalability Law |
usmap | US Maps Including Alaska and Hawaii |
UStatBookABSC | A Companion Package to the Book "U-Statistics, M-Estimation and Resampling" |
ustyc | Fetch US Treasury yield curve data |
utc | Coordinated Universal Time Transformations |
utf8 | Unicode Text Processing |
utile.tables | Build Tables for Publication |
utile.tools | Summarize Data for Publication |
utile.visuals | Create Visuals for Publication |
utility | Construct, Evaluate and Plot Value and Utility Functions |
UtilityFrailtyPH12 | Implementing EFF-TOX and Monotone Utility Based Phase 12 Trials |
utilityFunctionTools | P-Spline Regression for Utility Functions and Derived Measures |
utilsIPEA | IPEA Common Functions |
utiml | Utilities for Multi-Label Learning |
uuid | Tools for Generating and Handling of UUIDs |
UWHAM | Unbinned weighted histogram analysis method (UWHAM) |
uwot | The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction |
V8 | Embedded JavaScript and WebAssembly Engine for R |
vader | Valence Aware Dictionary and sEntiment Reasoner (VADER) |
vaersNDvax | Non-Domestic Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
vaersvax | US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
vagalumeR | Access to the 'Vagalume' API |
vagam | Variational Approximations for Generalized Additive Models |
valaddin | Functional Input Validation |
valection | Sampler for Verification Studies |
VALERIE | Visualising Splicing at Single-Cell Resolution |
validann | Validation Tools for Artificial Neural Networks |
validate | Data Validation Infrastructure |
validateRS | One-Sided Multivariate Testing Procedures for Rating Systems |
validatetools | Checking and Simplifying Validation Rule Sets |
valorate | Velocity and Accuracy of the LOg-RAnk TEst |
valottery | Results from the Virginia Lottery Draw Games |
valr | Genome Interval Arithmetic |
valueEQ5D | Scoring the EQ-5D Descriptive System |
valuer | Pricing of Variable Annuities |
vamc | A Monte Carlo Valuation Framework for Variable Annuities |
vampyr | Factor Analysis Controlling the Effects of Response Bias |
VancouvR | Access the 'City of Vancouver' Open Data API |
vanddraabe | Identification and Statistical Analysis of Conserved Waters Near Proteins |
vanquish | Variant Quality Investigation Helper |
vapour | Lightweight Access to the 'Geospatial Data Abstraction Library' ('GDAL') |
VAR.etp | VAR modelling: estimation, testing, and prediction |
varband | Variable Banding of Large Precision Matrices |
varbin | Optimal Binning of Continuous and Categorical Variables |
VarBundle | Read-Only Variable Bundles |
varbvs | Large-Scale Bayesian Variable Selection Using Variational Methods |
varclust | Variables Clustering |
vardiag | Variogram Diagnostics |
vardpoor | Variance Estimation for Sample Surveys by the Ultimate Cluster Method |
VarED | Variance Estimation using Difference-Based Methods |
VaRES | Computes value at risk and expected shortfall for over 100 parametric distributions |
varEst | Variance Estimation |
VarfromPDB | Disease-Gene-Variant Relations Mining from the Public Databases and Literature |
varhandle | Functions for Robust Variable Handling |
variables | Variable Descriptions |
VariableScreening | High-Dimensional Screening for Semiparametric Longitudinal Regression |
varian | Variability Analysis in R |
VarianceGamma | The Variance Gamma Distribution |
variantspark | A 'Sparklyr' Extension for 'VariantSpark' |
varImp | RF Variable Importance for Arbitrary Measures |
variosig | Testing Spatial Dependence Using Empirical Variogram |
varjmcm | Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models |
varrank | Heuristics Tools Based on Mutual Information for Variable Ranking |
VarReg | Semi-Parametric Variance Regression |
vars | VAR Modelling |
VARSEDIG | An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy |
varSel | Sequential Forward Floating Selection using Jeffries-Matusita Distance |
VarSelLCM | Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values |
varSelRF | Variable Selection using Random Forests |
varsExplore | Searchable Variable Explorer with Labelled Variables |
VARshrink | Shrinkage Estimation Methods for Vector Autoregressive Models |
VARsignR | Sign Restrictions, Bayesian, Vector Autoregression Models |
VarSwapPrice | Pricing a variance swap on an equity index |
varTestnlme | Variance Components Testing for Linear and Nonlinear Mixed Effects Models |
VARtests | Tests for Error Autocorrelation, ARCH Errors, and Cointegration in Vector Autoregressive Models |
varycoef | Modeling Spatially Varying Coefficients |
vaultr | Vault Client for Secrets and Sensitive Data |
vbdm | Variational Bayes Discrete Mixture Model |
vbsr | Variational Bayes Spike Regression Regularized Linear Models |
VBTree | Vector Binary Tree to Make Your Data Management More Efficient |
VC2copula | Extend the 'copula' Package with Families and Models from 'VineCopula' |
VCA | Variance Component Analysis |
vcd | Visualizing Categorical Data |
vcdExtra | 'vcd' Extensions and Additions |
vcov | Variance-Covariance Matrices and Standard Errors |
vcpen | Penalized Variance Components Analysis |
vcr | Record 'HTTP' Calls to Disk |
vcrpart | Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models |
vctrs | Vector Helpers |
vcvComp | Comparison of Variance - Covariance Patterns |
VDAP | Peptide Array Analysis Tools |
vdar | Discriminant Analysis Incorporating Individual Uncertainties |
vdg | Variance Dispersion Graphs and Fraction of Design Space Plots |
Vdgraph | Variance dispersion graphs and Fraction of design space plots for response surface designs |
VdgRsm | Plots of Scaled Prediction Variances for Response Surface Designs |
vdiffr | Visual Regression Testing and Graphical Diffing |
VDJgermlines | Variable, Diversity and Joining Sequences from Various Species |
VDSPCalibration | Statistical Methods for Designing and Analyzing a Calibration Study |
vec2dtransf | 2D Cartesian Coordinate Transformation |
veccompare | Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output |
vecsets | Like base::sets Tools But Keeps Duplicate Elements |
VecStatGraphs2D | Vector Analysis using Graphical and Analytical Methods in 2D |
VecStatGraphs3D | Vector analysis using graphical and analytical methods in 3D |
vectools | Supplementary Vector-Related Tools |
vegalite | Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec' |
vegan | Community Ecology Package |
vegan3d | Static and Dynamic 3D Plots for the 'vegan' Package |
vegawidget | 'Htmlwidget' for 'Vega' and 'Vega-Lite' |
vegclust | Fuzzy Clustering of Vegetation Data |
vegdata | Access Vegetation Databases and Treat Taxonomy |
vegetarian | Jost Diversity Measures for Community Data |
vegperiod | Determine Thermal Vegetation Periods |
vegtable | Handling Vegetation Data Sets |
vein | Vehicular Emissions Inventories |
velociraptr | Fossil Analysis |
vembedr | Functions to Embed Video in HTML |
venn | Draw Venn Diagrams |
VennDiagram | Generate High-Resolution Venn and Euler Plots |
venneuler | Venn and Euler Diagrams |
vennLasso | Variable Selection for Heterogeneous Populations |
vennplot | Venn Diagrams in 2D and 3D |
verification | Weather Forecast Verification Utilities |
versions | Query and Install Specific Versions of Packages on CRAN |
vertexenum | Vertex Enumeration of Polytopes |
VertexSimilarity | Creates Vertex Similarity Matrix for an Undirected Graph |
VertexSort | Network Hierarchical Structure and Randomization |
VeryLargeIntegers | Store and Operate with Arbitrarily Large Integers |
vesselr | Gradient and Vesselness Tools for Arrays and NIfTI Images |
vetools | Tools for Venezuelan Environmental Data |
vetr | Trust, but Verify |
VetResearchLMM | Linear Mixed Models - An Introduction with Applications in Veterinary Research |
vfcp | Computation of v Values for U and Copula C(U, v) |
VFP | Variance Function Program |
vfprogression | Visual Field (VF) Progression Analysis and Plotting Methods |
VFS | Vegetated Filter Strip and Erosion Model |
VGAM | Vector Generalized Linear and Additive Models |
VGAMdata | Data Supporting the 'VGAM' Package |
VGAMextra | Additions and Extensions of the 'VGAM' Package |
vhcub | Virus-Host Codon Usage Co-Adaptation Analysis |
VHDClassification | Discrimination/Classification in very high dimension with linear and quadratic rules |
vhica | Vertical and Horizontal Inheritance Consistence Analysis |
viafr | Interface to the 'VIAF' ('Virtual International Authority File') API |
vici | Vaccine Induced Cellular Immunogenicity with Bivariate Modeling |
vietnamcode | Convert Vietnam Provincial Codes |
viewshed3d | Compute Viewshed in 3D Point Clouds of Ecosystems |
VIF | VIF Regression: A Fast Regression Algorithm For Large Data |
VIFCP | Detecting Change-Points via VIFCP Method |
VIGoR | Variational Bayesian Inference for Genome-Wide Regression |
VIM | Visualization and Imputation of Missing Values |
vimp | Perform Inference on Algorithm-Agnostic Variable Importance |
VineCopula | Statistical Inference of Vine Copulas |
vinereg | D-Vine Quantile Regression |
vines | Multivariate Dependence Modeling with Vines |
violinmplot | Combination of violin plot with mean and standard deviation |
violinplotter | Plotting and Comparing Means with Violin Plots |
vioplot | Violin Plot |
viopoints | 1-D Scatter Plots with Jitter Using Kernel Density Estimates |
vip | Variable Importance Plots |
vipor | Plot Categorical Data Using Quasirandom Noise and Density Estimates |
VIRF | Computation of Volatility Impulse Response Function of Multivariate Time Series |
viridis | Default Color Maps from 'matplotlib' |
viridisLite | Default Color Maps from 'matplotlib' (Lite Version) |
viromeBrowser | Virome Sequencing Analysis Result Browser |
virtualNicheR | Generating Virtual Fundamental and Realised Niches |
virtualPollen | Simulating Pollen Curves from Virtual Taxa with Different Life and Niche Traits |
virtualspecies | Generation of Virtual Species Distributions |
virustotal | R Client for the VirusTotal API |
visdat | Preliminary Visualisation of Data |
ViSiElse | A Visual Tool for Behavior Analysis over Time |
visit | Phase I Dose Escalation Study Design for Vaccines |
visNetwork | Network Visualization using 'vis.js' Library |
visreg | Visualization of Regression Models |
vistime | Pretty Timelines |
visTree | Visualization of Subgroups for Decision Trees |
vistributions | Visualize Probability Distributions |
visualFields | Statistical Methods for Visual Fields |
visualize | Graph Probability Distributions with User Supplied Parameters and Statistics |
Visualize.CRAN.Downloads | Visualize Downloads from 'CRAN' Packages |
visvow | Visible Vowels: Visualization of Vowel Variation |
vita | Variable Importance Testing Approaches |
vitae | Curriculum Vitae for R Markdown |
vitality | Fitting Routines for the Vitality Family of Mortality Models |
vivo | Variable Importance via Oscillations |
vizdraws | Visualize Draws from the Prior and Posterior Distributions |
vkR | Access to VK API via R |
vlad | Variable Life Adjusted Display and Other Risk-Adjusted Quality Control Charts |
vlda | Visualization of Multidimensional Longitudinal Data |
VLF | Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records |
VLMC | Variable Length Markov Chains ('VLMC') Models |
VLTimeCausality | Variable-Lag Time Series Causality Inference Framework |
vmd | Variational Mode Decomposition |
vmsbase | GUI Tools to Process, Analyze and Plot Fisheries Data |
VNM | Finding Multiple-Objective Optimal Designs for the 4-Parameter Logistic Model |
vocaldia | Create and Manipulate Vocalisation Diagrams |
volcano3D | Interactive Plotting of Three-Way Differential Expression Analysis |
volesti | Volume Approximation and Sampling of Convex Polytopes |
volleystat | Detailed Statistics on Volleyball Matches |
voronoiTreemap | Voronoi Treemaps with Added Interactivity by Shiny |
vortexR | Post Vortex Simulation Analysis |
vortexRdata | Example Data for R Package 'vortexR' |
VOSONDash | User Interface for Collecting and Analysing Social Networks |
vosonSML | Collecting Social Media Data and Generating Networks for Analysis |
Voss | Generic Voss algorithm (random sequential additions) |
vote | Election Vote Counting |
voteogram | United States House and Senate Voting Cartogram Generators |
votesys | Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods |
vottrans | Voter Transition Analysis |
vov | CSS Animations for 'shiny' Elements |
vowels | Vowel Manipulation, Normalization, and Plotting |
vows | Voxelwise Semiparametrics |
voxel | Mass-Univariate Voxelwise Analysis of Medical Imaging Data |
vpc | Create Visual Predictive Checks |
vqtl | Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses |
vrcp | Change Point Estimation for Regression with Varying Segments and Heteroscedastic Variances |
vrmlgen | Generate 3D visualizations for data exploration on the web |
vroom | Read and Write Rectangular Text Data Quickly |
vrtest | Variance Ratio tests and other tests for Martingale Difference Hypothesis |
vscc | Variable selection for clustering and classification |
VSE | Variant Set Enrichment |
vsgoftest | Goodness-of-Fit Tests Based on Kullback-Leibler Divergence |
vstsr | Access to Visual Studio Team Services API via R |
VSURF | Variable Selection Using Random Forests |
vtable | Variable Table for Variable Documentation |
VTrack | A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data |
vtreat | A Statistically Sound 'data.frame' Processor/Conditioner |
vtree | Display Information About Nested Subsets of a Data Frame |
VTShiny | Interactive Document for Working with Variance Analysis |
vudc | Visualization of Univariate Data for Comparison |
VUROCS | Volume under the ROC Surface for Multi-Class ROC Analysis |
vwline | Draw Variable-Width Lines |
VWPre | Tools for Preprocessing Visual World Data |
vwr | Useful functions for visual word recognition research |
W2CWM2C | A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis |
W3CMarkupValidator | R Interface to W3C Markup Validation Services |
waccR | Cost of Capital by Sector Data |
WACS | Multivariate Weather-State Approach Conditionally Skew-Normal Generator |
wactor | Word Factor Vectors |
waffle | Create Waffle Chart Visualizations in R |
wahc | Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model |
waiter | Loading Screen for 'Shiny' |
wakefield | Generate Random Data Sets |
waldo | Find Differences Between R Objects |
walker | Bayesian Generalized Linear Models with Time-Varying Coefficients |
walkscoreAPI | Walk Score and Transit Score API |
wallace | A Modular Platform for Reproducible Modeling of Species Niches and Distributions |
wally | The Wally Calibration Plot for Risk Prediction Models |
walmartAPI | Walmart Open API Wrapper |
walrus | Robust Statistical Methods |
WaMaSim | Simulate Rehabilitation Strategies for Water Distribution Systems |
wand | Retrieve 'Magic' Attributes from Files and Directories |
warbleR | Streamline Bioacoustic Analysis |
WARN | Weaning Age Reconstruction with Nitrogen Isotope Analysis |
warp | Group Dates |
warpMix | Mixed Effects Modeling with Warping for Functional Data Using B-Spline |
washdata | Urban Water and Sanitation Survey Dataset |
washeR | Time Series Outlier Detection |
wasim | Visualisation and analysis of output files of the hydrological model WASIM |
waspr | Wasserstein Barycenters of Subset Posteriors |
water | Actual Evapotranspiration with Energy Balance Models |
waterData | Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data |
waterfall | Waterfall Charts |
waterfalls | Create Waterfall Charts using 'ggplot2' Simply |
WaterML | Fetch and Analyze Data from 'WaterML' and 'WaterOneFlow' Web Services |
waterquality | Satellite Derived Water Quality Detection Algorithms |
Watersheds | Spatial Watershed Aggregation and Spatial Drainage Network Analysis |
waterYearType | Sacramento and San Joaquin Valley Water Year Types |
waveband | Computes Credible Intervals for Bayesian Wavelet Shrinkage |
waved | Wavelet Deconvolution |
waveformlidar | Waveform LiDAR Data Processing and Analysis |
wavefunction | Wave Function Representation of Real Distributions |
WaveletANN | Wavelet ANN Model |
WaveletArima | Wavelet ARIMA Model |
WaveletComp | Computational Wavelet Analysis |
WaveletGARCH | Fit the Wavelet-GARCH Model to Volatile Time Series Data |
wavelets | Functions for Computing Wavelet Filters, Wavelet Transforms and Multiresolution Analyses |
wavemulcor | Wavelet Routines for Global and Local Multiple Regression and Correlation |
waver | Calculate Fetch and Wave Energy |
WaverR | Data Estimation using Weighted Averages of Multiple Regressions |
WaveSampling | Weakly Associated Vectors (WAVE) Sampling |
waveslim | Basic Wavelet Routines for One-, Two-, and Three-Dimensional Signal Processing |
wavethresh | Wavelets Statistics and Transforms |
wavScalogram | Wavelet Scalogram Tools for Time Series Analysis |
wBoot | Bootstrap Methods |
wbs | Wild Binary Segmentation for Multiple Change-Point Detection |
wbsd | Wild Bootstrap Size Diagnostics |
wbstats | Programmatic Access to Data and Statistics from the World Bank API |
wbsts | Multiple Change-Point Detection for Nonstationary Time Series |
WCE | Weighted Cumulative Exposure Models |
WCM | Water Cloud Model (WCM) for the Simulation of Leaf Area Index (LAI) and Soil Moisture (SM) from Microwave Backscattering |
wCorr | Weighted Correlations |
WCQ | Detection of QTL effects in a small mapping population |
WDI | World Development Indicators and Other World Bank Data |
wdm | Weighted Dependence Measures |
wdman | 'Webdriver'/'Selenium' Binary Manager |
wdpar | Interface to the World Database on Protected Areas |
weathermetrics | Functions to Convert Between Weather Metrics |
weatherr | Tools for Handling and Scraping Instant Weather Forecast Feeds |
webchem | Chemical Information from the Web |
webdriver | 'WebDriver' Client for 'PhantomJS' |
webex | Create Interactive Web Exercises in 'R Markdown' |
WebGestaltR | Gene Set Analysis Toolkit WebGestaltR |
webglobe | 3D Interactive Globes |
webmockr | Stubbing and Setting Expectations on 'HTTP' Requests |
webp | A New Format for Lossless and Lossy Image Compression |
WebPower | Basic and Advanced Statistical Power Analysis |
webr | Data and Functions for Web-Based Analysis |
webreadr | Tools for Reading Formatted Access Log Files |
websearchr | Access Domains and Search Popular Websites |
webshot | Take Screenshots of Web Pages |
websocket | 'WebSocket' Client Library |
webTRISr | A Wrapper Around 'WebTRIS' Traffic Flow API from Highways England |
webuse | Import Stata 'webuse' Datasets |
webutils | Utility Functions for Developing Web Applications |
wec | Weighted Effect Coding |
weco | Western Electric Company Rules (WECO) for Shewhart Control Chart |
wedge | The Exterior Calculus |
WEE | Weighted Estimated Equation (WEE) Approaches in Genetic Case-Control Studies |
WEGE | A Metric to Rank Locations for Biodiversity Conservation |
WeibullFit | Fits and Plots a Dataset to the Weibull Probability Distribution Function |
weibullness | Goodness-of-Fit Test for Weibull Distribution (Weibullness) |
WeibullR | Weibull Analysis for Reliability Engineering |
weibulltools | Statistical Methods for Life Data Analysis |
Weighted.Desc.Stat | Weighted Descriptive Statistics |
WeightedCluster | Clustering of Weighted Data |
WeightedPortTest | Weighted Portmanteau Tests for Time Series Goodness-of-fit |
WeightedROC | Fast, Weighted ROC Curves |
weightedScores | Weighted Scores Method for Regression Models with Dependent Data |
WeightIt | Weighting for Covariate Balance in Observational Studies |
weightQuant | Weights for Incomplete Longitudinal Data and Quantile Regression |
weightr | Estimating Weight-Function Models for Publication Bias |
weights | Weighting and Weighted Statistics |
WeightSVM | Subject Weighted Support Vector Machines |
weirs | A Hydraulics Package to Compute Open-Channel Flow over Weirs |
welchADF | Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality |
wellknown | Convert Between 'WKT' and 'GeoJSON' |
WeMix | Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum Likelihood Estimation |
wesanderson | A Wes Anderson Palette Generator |
wevid | Quantifying Performance of a Binary Classifier Through Weight of Evidence |
wfe | Weighted Linear Fixed Effects Regression Models for Causal Inference |
wfg | Weighted Fast Greedy Algorithm |
wfindr | Crossword, Scrabble and Anagram Solver |
wflo | Data Set and Helper Functions for Wind Farm Layout Optimization Problems |
wgaim | Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R |
WGCNA | Weighted Correlation Network Analysis |
wgeesel | Weighted Generalized Estimating Equations and Model Selection |
WGScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
WgtEff | Functions for Weighting Effects |
whatr | Scrape and Analyze the J! Archive |
wheatmap | Incrementally Build Complex Plots using Natural Semantics |
whereami | Reliably Return the Source and Call Location of a Command |
whereport | Geolocalization of IATA Codes |
whisker | {{mustache}} for R, Logicless Templating |
whitechapelR | Advanced Policing Techniques for the Board Game "Letters from Whitechapel" |
whitening | Whitening and High-Dimensional Canonical Correlation Analysis |
whitestrap | White Test and Bootstrapped White Test for Heteroskedasticity |
WhiteStripe | White Matter Normalization for Magnetic Resonance Images using WhiteStripe |
whoami | Username, Full Name, Email Address, 'GitHub' Username of the Current User |
whoapi | A 'Whoapi' API Client |
wicket | Utilities to Handle WKT Spatial Data |
widals | Weighting by Inverse Distance with Adaptive Least Squares |
widgetframe | 'Htmlwidgets' in Responsive 'iframes' |
widyr | Widen, Process, then Re-Tidy Data |
wiesbaden | Access Databases from the Federal Statistical Office of Germany |
wikibooks | Functions and datasets of the german WikiBook "GNU R" |
WikidataQueryServiceR | API Client Library for 'Wikidata Query Service' |
WikidataR | API Client Library for 'Wikidata' |
wikifacts | Generates Facts Sourced from the Wikipedia Main Page |
wikilake | Scrape Lake Metadata Tables from Wikipedia |
WikipediaR | R-Based Wikipedia Client |
wikipediatrend | Public Subject Attention via Wikipedia Page View Statistics |
WikipediR | A MediaWiki API Wrapper |
wikitaxa | Taxonomic Information from 'Wikipedia' |
WilcoxCV | Wilcoxon-based variable selection in cross-validation |
wildcard | Templates for Data Frames |
wildlifeDI | Calculate Indices of Dynamic Interaction for Wildlife Tracking Data |
wildpoker | Best Hand Analysis for Poker Variants Including Wildcards |
wilson | Web-Based Interactive Omics Visualization |
windAC | Area Correction Methods |
WindCurves | Tool to Fit Wind Turbine Power Curves |
windex | windex: Analysing convergent evolution using the Wheatsheaf index |
windfarmGA | Genetic Algorithm for Wind Farm Layout Optimization |
winfapReader | Interact with Peak Flow Data in the United Kingdom |
wingui | Advanced Windows Functions |
winRatioAnalysis | Estimates the Win-Ratio as a Function of Time |
wiqid | Quick and Dirty Estimates for Wildlife Populations |
wISAM | Weighted Inbred Strain Association Mapping |
WiSEBoot | Wild Scale-Enhanced Bootstrap |
wiseR | A Shiny Application for End-to-End Bayesian Decision Network Analysis and Web-Deployment |
withr | Run Code 'With' Temporarily Modified Global State |
wk | Lightweight Well-Known Geometry Parsing |
wkb | Convert Between Spatial Objects and Well-Known Binary Geometry |
wkNNMI | A Mutual Information-Weighted k-NN Imputation Algorithm |
wktmo | Converting Weekly Data to Monthly Data |
wkutils | Utilities for Well-Known Geometry Vectors |
WLreg | Regression Analysis Based on Win Loss Endpoints |
WMDB | Discriminant Analysis Methods by Weight Mahalanobis Distance and bayes |
wmlf | Wavelet Leaders in Multifractal Analysis |
wmm | World Magnetic Model |
wmwpow | Precise and Accurate Power of the Wilcoxon-Mann-Whitney Rank-Sum Test for a Continuous Variable |
WMWssp | Wilcoxon-Mann-Whitney Sample Size Planning |
wnl | Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis |
wNNSel | Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables |
wnominate | Multidimensional Vote Scaling Software |
woe | Computes Weight of Evidence and Information Values |
woeBinning | Supervised Weight of Evidence Binning of Numeric Variables and Factors |
woeR | Weight of Evidence Based Segmentation of a Variable |
womblR | Spatiotemporal Boundary Detection Model for Areal Unit Data |
wooldridge | 111 Data Sets from "Introductory Econometrics: A Modern Approach, 6e" by Jeffrey M. Wooldridge |
worcs | Workflow for Open Reproducible Code in Science |
word.alignment | Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation |
word2vec | Distributed Representations of Words |
wordbankr | Accessing the Wordbank Database |
wordcloud | Word Clouds |
wordcloud2 | Create Word Cloud by 'htmlwidget' |
wordgraph | Graph Functionality of Free Associated Words |
wordmatch | Matches words in one file with words in another file |
wordnet | WordNet Interface |
WordOfMouth | Estimates Economic Variables for Word-of-Mouth-Campaigns |
WordPools | Classical Word Pools Used in Studies of Learning and Memory |
WordR | Rendering Word Documents with R Inline Code |
wordspace | Distributional Semantic Models in R |
workflowr | A Framework for Reproducible and Collaborative Data Science |
workflows | Modeling Workflows |
WorldFlora | Standardize Plant Names According to World Flora Online Taxonomic Backbone |
worldmet | Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD) |
worms | Retriving Aphia Information from World Register of Marine Species |
worrms | World Register of Marine Species (WoRMS) Client |
wosr | Clients to the 'Web of Science' and 'InCites' APIs |
WPC | Weighted Predictiveness Curve |
wPerm | Permutation Tests |
WPKDE | Weighted Piecewise Kernel Density Estimation |
wpp2008 | World Population Prospects 2008 |
wpp2010 | World Population Prospects 2010 |
wpp2012 | World Population Prospects 2012 |
wpp2015 | World Population Prospects 2015 |
wpp2017 | World Population Prospects 2017 |
wpp2019 | World Population Prospects 2019 |
wppExplorer | Explorer of World Population Prospects |
wql | Exploring Water Quality Monitoring Data |
wqs | Weighted Quantile Sum Regression |
WR | Win Ratio Analysis |
wrangle | A Systematic Data Wrangling Idiom |
Wrapped | Computes Pdf, Cdf, Quantile, Random Numbers and Provides Estimation for any Univariate Wrapped Distributions |
wrapr | Wrap R Tools for Debugging and Parametric Programming |
wrassp | Interface to the 'ASSP' Library |
wrGraph | Graphics in the Context of Analyzing High-Throughput Data |
WrightMap | IRT Item-Person Map with 'ConQuest' Integration |
write.snns | Function for exporting data to SNNS pattern files |
writexl | Export Data Frames to Excel 'xlsx' Format |
WriteXLS | Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files |
wrMisc | Analyze Experimental High-Throughput (Omics) Data |
wrProteo | Proteomics Data Analysis Functions |
WRS2 | A Collection of Robust Statistical Methods |
WRSS | Water Resources System Simulator |
wrswoR | Weighted Random Sampling without Replacement |
wrswoR.benchmark | Benchmark and Correctness Data for Weighted Random Sampling Without Replacement |
WRTDStidal | Weighted Regression for Water Quality Evaluation in Tidal Waters |
wru | Who are You? Bayesian Prediction of Racial Category Using Surname and Geolocation |
wsbackfit | Weighted Smooth Backfitting for Structured Models |
wskm | Weighted k-Means Clustering |
wsrf | Weighted Subspace Random Forest for Classification |
wSVM | Weighted SVM with boosting algorithm for improving accuracy |
wsyn | Wavelet Approaches to Studies of Synchrony in Ecology and Other Fields |
wtest | The W-Test for Genetic Interactions Testing |
wTO | Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network |
WufooR | R Wrapper for the 'Wufoo.com' - The Form Building Service |
wux | Wegener Center Climate Uncertainty Explorer |
wv | Wavelet Variance |
WVPlots | Common Plots for Analysis |
wvtool | Image Tools for Automated Wood Identification |
WWGbook | Functions and datasets for WWGbook |
wwntests | Hypothesis Tests for Functional Time Series |
WWR | Weighted Win Loss Statistics and their Variances |
wyz.code.metaTesting | Wizardry Code Meta Testing |
wyz.code.offensiveProgramming | Wizardry Code Offensive Programming |
wyz.code.rdoc | Wizardry Code Offensive Programming R Documentation |
wyz.code.testthat | Wizardry Code Offensive Programming Test Generation |
x.ent | eXtraction of ENTity |
x12 | Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment |
x12GUI | X12 - Graphical User Interface |
x13binary | Provide the 'x13ashtml' Seasonal Adjustment Binary |
x3ptools | Tools for Working with 3D Surface Measurements |
xaringan | Presentation Ninja |
xaringanthemer | Custom 'xaringan' CSS Themes |
xbreed | Genomic Simulation of Purebred and Crossbred Populations |
XBRL | Extraction of Business Financial Information from 'XBRL' Documents |
xdcclarge | Estimating a (c)DCC-GARCH Model in Large Dimensions |
xergm.common | Common Infrastructure for Extensions of Exponential Random Graph Models |
xesreadR | Read and Write XES Files |
xfun | Miscellaneous Functions by 'Yihui Xie' |
xgb2sql | Convert Trained 'XGBoost' Model to SQL Query |
xgboost | Extreme Gradient Boosting |
xgobi | Interface to the XGobi and XGvis programs for graphical data analysis |
xgxr | Exploratory Graphics for Pharmacometrics |
XHWE | X Chromosome Hardy-Weinberg Equilibrium |
XICOR | Association Measurement Through Cross Rank Increments |
XiMpLe | A Simple XML Tree Parser and Generator |
xkcd | Plotting ggplot2 Graphics in an XKCD Style |
xkcdcolors | Color Names from the XKCD Color Survey |
XKCDdata | Get XKCD Comic Data |
XLConnect | Excel Connector for R |
xlink | Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes |
xLLiM | High Dimensional Locally-Linear Mapping |
xlsimple | 'XLConnect' Wrapper |
xlsx | Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files |
xlsx2dfs | Read and Write 'Excel' Sheets into and from List of Data Frames |
xlsxjars | Package required POI jars for the xlsx package |
xltabr | Automatically Write Beautifully Formatted Cross Tabulations/Contingency Tables to Excel |
xlutils3 | Extract Multiple Excel Files at Once |
xmeta | A Toolbox for Multivariate Meta-Analysis |
Xmisc | Xiaobei's miscellaneous classes and functions |
XML | Tools for Parsing and Generating XML Within R and S-Plus |
xml2 | Parse XML |
XML2R | EasieR XML data collection |
xml2relational | Converting XML Documents into Relational Data Models |
xmlparsedata | Parse Data of 'R' Code as an 'XML' Tree |
xmlr | Read, Write and Work with 'XML' Data |
xmlrpc2 | Implementation of the Remote Procedure Call Protocol ('XML-RPC') |
XMRF | Markov Random Fields for High-Throughput Genetics Data |
xmrr | Generate XMR Control Chart Data from Time-Series Data |
xnet | Two-Step Kernel Ridge Regression for Network Predictions |
XNomial | Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities |
xoi | Tools for Analyzing Crossover Interference |
xopen | Open System Files, 'URLs', Anything |
xpectr | Generates Expectations for 'testthat' Unit Testing |
xplain | Providing Interactive Interpretations and Explanations of Statistical Results |
xplorerr | Tools for Interactive Data Exploration |
Xplortext | Statistical Analysis of Textual Data |
xpose | Diagnostics for Pharmacometric Models |
xpose4 | Diagnostics for Nonlinear Mixed-Effect Models |
xptr | Manipulating External Pointer |
XR | A Structure for Interfaces from R |
xray | X Ray Vision on your Datasets |
xrf | eXtreme RuleFit |
xRing | Visualization and Correction of X-Ray Micro-Density Profiles |
XRJulia | Structured Interface to Julia |
xrnet | Hierarchical Regularized Regression |
xROI | Delineate Region of Interests (ROI's) and Extract Time-Series Data from Digital Repeat Photography Images |
XRPython | Structured Interface to 'Python' |
XRSCC | Statistical Quality Control Simulation |
xseq | Assessing Functional Impact on Gene Expression of Mutations in Cancer |
xslt | Extensible Style-Sheet Language Transformations |
xsp | The Chi-Square Periodogram |
xspliner | Assisted Model Building, using Surrogate Black-Box Models to Train Interpretable Spline Based Additive Models |
xSub | Cross-National Data on Sub-National Violence |
xtable | Export Tables to LaTeX or HTML |
xtal | Crystallization Toolset |
xtensor | Headers for the 'xtensor' Library |
xtermStyle | Terminal Text Formatting Using Escape Sequences |
xts | eXtensible Time Series |
xtune | Regularized Regression with Differential Penalties Integrating External Information |
xVA | Calculates Credit Risk Valuation Adjustments |
xwf | Extrema-Weighted Feature Extraction |
xxIRT | Item Response Theory and Computer-Based Testing in R |
xyloplot | A Method for Creating Xylophone-Like Frequency Density Plots |
xyz | The 'xyz' Algorithm for Fast Interaction Search in High-Dimensional Data |
yacca | Yet Another Canonical Correlation Analysis Package |
yager | Yet Another General Regression Neural Network |
yaImpute | Nearest Neighbor Observation Imputation and Evaluation Tools |
yakmoR | A Simple Wrapper for the k-Means Library Yakmo |
YaleToolkit | Data exploration tools from Yale University |
yaml | Methods to Convert R Data to YAML and Back |
yamlet | Versatile Curation of Table Metadata |
Yamm | Multivariate Methods Based on Projections and Related Concepts |
yap | Yet Another Probabilistic Neural Network |
yardstick | Tidy Characterizations of Model Performance |
yarr | Yet Another 'ARFF' Reader |
yarrr | A Companion to the e-Book "YaRrr!: The Pirate's Guide to R" |
yasp | String Functions for Compact R Code |
yatah | Yet Another TAxonomy Handler |
ycinterextra | Yield curve or zero-coupon prices interpolation and extrapolation |
yesno | Ask Yes-No Questions |
yhat | Interpreting Regression Effects |
yhatr | R Binder for the Yhat API |
YieldCurve | Modelling and estimation of the yield curve |
ykmeans | K-means using a target variable |
yll | Compute Expected Years of Life Lost (YLL) and Average YLL |
ymlthis | Write 'YAML' for 'R Markdown', 'bookdown', 'blogdown', and More |
yonder | A Reactive Web Framework Built on 'shiny' |
yorkr | Analyze Cricket Performances Based on Data from Cricsheet |
youtubecaption | Downloading YouTube Subtitle Transcription in a Tidy Tibble Data Frame |
YPBP | Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials |
YPInterimTesting | Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials |
YPPE | Yang and Prentice Model with Piecewise Exponential Baseline Distribution |
ypr | Yield Per Recruit |
YRmisc | Y&R Miscellaneous R Functions |
YuGene | A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses |
yuima | The YUIMA Project Package for SDEs |
yuimaGUI | A Graphical User Interface for the 'yuima' Package |
yum | Utilities to Extract and Process 'YAML' Fragments |
yummlyr | R Bindings for Yummly API |
Z10 | Simple Ecological Statistics from the NEON Network |
zalpha | Run a Suite of Selection Statistics |
zbank | 'ZooBank' API Client |
zCompositions | Treatment of Zeros, Left-Censored and Missing Values in Compositional Data Sets |
zcurve | An Implementation of Z-Curves |
zeallot | Multiple, Unpacking, and Destructuring Assignment |
ZeBook | Working with Dynamic Models for Agriculture and Environment |
zebu | Local Association Measures |
zeitgebr | Analysis of Circadian Behaviours |
zen4R | Interface to 'Zenodo' REST API |
zendeskR | Zendesk API Wrapper |
zeroEQpart | Zero Order vs (Semi) Partial Correlation Test and CI |
zetadiv | Functions to Compute Compositional Turnover Using Zeta Diversity |
zfa | Zoom-Focus Algorithm |
zFactor | Calculate the Compressibility Factor 'z' for Hydrocarbon Gases |
zfit | Fit Models in a Pipe |
ZIBBSeqDiscovery | Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data |
ZIBseq | Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression |
zic | Bayesian Inference for Zero-Inflated Count Models |
ZillowR | R Interface to Zillow Real Estate and Mortgage Data API |
ZIM | Zero-Inflated Models (ZIM) for Count Time Series with Excess Zeros |
zip | Cross-Platform 'zip' Compression |
zipangu | Japanese Utility Functions and Data |
ZIPFA | Zero Inflated Poisson Factor Analysis |
zipfextR | Zipf Extended Distributions |
zipfR | Statistical Models for Word Frequency Distributions |
ziphsmm | Zero-Inflated Poisson Hidden (Semi-)Markov Models |
zipR | Pythonic Zip() for R |
ZipRadius | Creates a Data Frame of US Zip Codes in a Given Radius from a Given US Zip Code |
zoeppritz | Seismic Reflection and Scattering Coefficients |
zoib | Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression |
ZOIP | ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression |
zoltr | Interface to the 'Zoltar' Forecast Repository API |
zonator | Utilities for Zonation Spatial Conservation Prioritization Software |
zoo | S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations) |
zooaRch | Analytical Tools for Zooarchaeological Data |
zooaRchGUI | Interactive Analytical Tools for Zooarchaeological Data |
zoocat | 'zoo' Objects with Column Attributes |
zooimage | Analysis of Numerical Plankton Images |
zoom | A spatial data visualization tool |
zoon | Reproducible, Accessible & Shareable Species Distribution Modelling |
ZRA | Dynamic Plots for Time Series Forecasting |
zscorer | Child Anthropometry z-Score Calculator |
Zseq | Integer Sequence Generator |
ztable | Zebra-Striped Tables in LaTeX and HTML Formats |
ztpln | Zero-Truncated Poisson Lognormal Distribution |
zTree | Functions to Import Data from 'z-Tree' into R |
ztype | Run a Ztype Game Loaded with R Functions |
ZVCV | Zero-Variance Control Variates |
zyp | Zhang + Yue-Pilon Trends Package |
zzlite | Lite Wrapper for the 'Zamzar File Conversion' API |