Data integration Web application for biobanks by 'OBiBa'. 'Opal' is the core database application for biobanks. Participant data, once collected from any data source, must be integrated and stored in a central data repository under a uniform model. 'Opal' is such a central repository. It can import, process, validate, query, analyze, report, and export data. 'Opal' is typically used in a research center to analyze the data acquired at assessment centres. Its ultimate purpose is to achieve seamless data-sharing among biobanks. This 'Opal' client allows to interact with 'Opal' web services and to perform operations on the R server side. 'DataSHIELD' administration tools are also provided.
Version: | 1.4.1 |
Depends: | R (≥ 3.1), httr |
Imports: | xml2, jsonlite, mime, progress |
Suggests: | e1071, knitr, knitrBootstrap, rmarkdown, tibble, testthat |
Published: | 2020-06-08 |
Author: | Yannick Marcon [aut, cre], Amadou Gaye [ctb], OBiBa group [cph] |
Maintainer: | Yannick Marcon <yannick.marcon at obiba.org> |
BugReports: | https://github.com/obiba/opalr |
License: | GPL-3 |
URL: | https://www.obiba.org/ https://www.obiba.org/pages/products/opal/ https://doi.org/10.1093/ije/dyx180 http://www.datashield.ac.uk/ |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | opalr results |
Reference manual: | opalr.pdf |
Vignettes: |
Opal Files API Opal Projects API Opal R Session API |
Package source: | opalr_1.4.1.tar.gz |
Windows binaries: | r-devel: opalr_1.4.1.zip, r-release: opalr_1.4.1.zip, r-oldrel: opalr_1.4.1.zip |
macOS binaries: | r-release: opalr_1.4.1.tgz, r-oldrel: opalr_1.4.1.tgz |
Old sources: | opalr archive |
Reverse depends: | DSOpal |
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