Provides a web app for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
Version: | 0.5.0 |
Depends: | R (≥ 3.5) |
Imports: | dplyr (≥ 0.8.3), DT (≥ 0.5), ggplot2 (≥ 3.2.0), ggpubr (≥ 0.2), magrittr (≥ 1.5), plotly (≥ 4.9.0), RColorBrewer (≥ 1.1.2), shiny (≥ 1.3.2), shinyBS (≥ 0.61), shinyjs (≥ 1.0), shinythemes (≥ 1.1.2), shinyWidgets (≥ 0.4.8), tibble (≥ 2.1.3), UCSCXenaTools (≥ 1.2.2), utils, zip (≥ 2.0.1) |
Suggests: | covr (≥ 3.2.1), testthat (≥ 2.0.1) |
Published: | 2020-06-03 |
Author: | Shixiang Wang |
Maintainer: | Shixiang Wang <w_shixiang at 163.com> |
BugReports: | https://github.com/openbiox/XenaShiny/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/openbiox/XenaShiny |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | UCSCXenaShiny results |
Reference manual: | UCSCXenaShiny.pdf |
Package source: | UCSCXenaShiny_0.5.0.tar.gz |
Windows binaries: | r-devel: UCSCXenaShiny_0.5.0.zip, r-release: UCSCXenaShiny_0.5.0.zip, r-oldrel: UCSCXenaShiny_0.5.0.zip |
macOS binaries: | r-release: UCSCXenaShiny_0.5.0.tgz, r-oldrel: UCSCXenaShiny_0.5.0.tgz |
Old sources: | UCSCXenaShiny archive |
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