Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.
| Version: | 1.1.15 |
| Depends: | R (≥ 3.4.0) |
| Imports: | Biostrings, IRanges, Rsamtools, GenomicRanges (≥ 1.23.0), aod, VGAM (≥ 0.8.4), methods, GenomicAlignments, dplyr, magrittr |
| Suggests: | knitr |
| Published: | 2020-01-09 |
| Author: | Vincent Plagnol [aut, cre] |
| Maintainer: | Vincent Plagnol <v.plagnol at ucl.ac.uk> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| CRAN checks: | ExomeDepth results |
| Reference manual: | ExomeDepth.pdf |
| Vignettes: |
ExomeDepth |
| Package source: | ExomeDepth_1.1.15.tar.gz |
| Windows binaries: | r-devel: ExomeDepth_1.1.15.zip, r-release: ExomeDepth_1.1.15.zip, r-oldrel: ExomeDepth_1.1.15.zip |
| macOS binaries: | r-release: ExomeDepth_1.1.15.tgz, r-oldrel: not available |
| Old sources: | ExomeDepth archive |
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