Analyze Peptide Array Data and characterize peptide sequence space. Allows for high level visualization of global signal, Quality control based on replicate correlation and/or relative Kd, calculation of peptide Length/Charge/Kd parameters, Hits selection based on RFU Signal, and amino acid composition/basic motif recognition with RFU signal weighting. Basic signal trends can be used to generate peptides that follow the observed compositional trends.
| Version: | 2.0.0 |
| Imports: | stringr, drc, ggplot2, reshape2 |
| Published: | 2016-05-22 |
| Author: | Cody Moore |
| Maintainer: | Cody Moore <Jumper9400 at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | VDAP results |
| Reference manual: | VDAP.pdf |
| Package source: | VDAP_2.0.0.tar.gz |
| Windows binaries: | r-devel: VDAP_2.0.0.zip, r-release: VDAP_2.0.0.zip, r-oldrel: VDAP_2.0.0.zip |
| macOS binaries: | r-release: VDAP_2.0.0.tgz, r-oldrel: VDAP_2.0.0.tgz |
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