tcR: Advanced Data Analysis of Immune Receptor Repertoires

Platform for the advanced analysis of T cell receptor and Immunoglobulin repertoires data and visualisation of the analysis results. Publication: Nazarov et al. (2015) <doi:10.1186/s12859-015-0613-1>.

Version: 2.3.2
Depends: R (≥ 3.0.0), ggplot2 (≥ 1.0.0), dplyr (≥ 0.4.0), gridExtra (≥ 0.9.0), reshape2 (≥ 1.2.0), igraph (≥ 0.7.1)
Imports: utils (≥ 3.1.0), Rcpp (≥ 0.11.1), grid (≥ 3.0.0), data.table (≥ 1.9.0), gtable (≥ 0.1.2), stringdist (≥ 0.7.3), scales (≥ 0.3.0)
LinkingTo: Rcpp
Suggests: knitr (≥ 1.8), roxygen2 (≥ 3.0.0), rmarkdown (≥ 1.0)
Published: 2020-06-09
Author: Vadim Nazarov
Maintainer: Vadim Nazarov <vdm.nazarov at gmail.com>
BugReports: https://github.com/immunomind/immunarch/issues
License: Apache License 2.0
URL: https://immunarch.com/, http://imminfo.github.io/tcr/
NeedsCompilation: yes
Citation: tcR citation info
Materials: README NEWS
CRAN checks: tcR results

Downloads:

Reference manual: tcR.pdf
Vignettes: tcR vignette
Package source: tcR_2.3.2.tar.gz
Windows binaries: r-devel: tcR_2.3.2.zip, r-release: tcR_2.3.2.zip, r-oldrel: tcR_2.3.2.zip
macOS binaries: r-release: tcR_2.3.2.tgz, r-oldrel: tcR_2.3.2.tgz
Old sources: tcR archive

Reverse dependencies:

Reverse imports: kmeRs, powerTCR

Linking:

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