Implements the projected t-SNE method for batch correction of high-dimensional data. Please see Aliverti et al. (2020) <doi:10.1093/bioinformatics/btaa189> for more information.
| Version: | 0.10.0 |
| Imports: | stats, RSpectra, utils, Rtsne, graphics |
| Suggests: | data.table, batchelor, kBET, splatter, scater, knitr, lisi, harmony, dlfUtils, xtable |
| Published: | 2020-04-28 |
| Author: | Dayne L Filer [aut, cre], Emanuele Aliverti [aut], Jeff Tilson [aut], Kirk C Wilhelmsen [aut], David B Dunson [aut] |
| Maintainer: | Dayne L Filer <dayne.filer at gmail.com> |
| License: | GPL-3 |
| URL: | https://github.com/emanuelealiverti/BC_tSNE |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Citation: | bcTSNE citation info |
| CRAN checks: | bcTSNE results |
| Reference manual: | bcTSNE.pdf |
| Vignettes: |
Simulation Experiment |
| Package source: | bcTSNE_0.10.0.tar.gz |
| Windows binaries: | r-devel: bcTSNE_0.10.0.zip, r-release: bcTSNE_0.10.0.zip, r-oldrel: bcTSNE_0.10.0.zip |
| macOS binaries: | r-release: bcTSNE_0.10.0.tgz, r-oldrel: bcTSNE_0.10.0.tgz |
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