The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.
| Version: | 0.2.7 |
| Suggests: | ape, plotrix, parallel, seqinr, gtools |
| Published: | 2020-03-02 |
| Author: | Arnaud Le Rouzic |
| Maintainer: | Arnaud Le Rouzic <lerouzic at egce.cnrs-gif.fr> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | vhica results |
| Reference manual: | vhica.pdf |
| Package source: | vhica_0.2.7.tar.gz |
| Windows binaries: | r-devel: vhica_0.2.7.zip, r-release: vhica_0.2.7.zip, r-oldrel: vhica_0.2.7.zip |
| macOS binaries: | r-release: vhica_0.2.7.tgz, r-oldrel: vhica_0.2.7.tgz |
| Old sources: | vhica archive |
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