Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.
Version: | 0.1.2 |
Imports: | dplyr, rlang, purrr, tidyr, fuzzyjoin (≥ 0.1.3), IRanges, Rcpp |
LinkingTo: | Rcpp |
Suggests: | testthat, knitr, rmarkdown |
Published: | 2019-08-08 |
Author: | Constantin Ahlmann-Eltze [aut, cre], Stan Developers [cph] (Code from the Stan Math library is reused in 'cluster_interval.cpp'), David Robinson [cph] (Code from the fuzzyjoin package is reused) |
Maintainer: | Constantin Ahlmann-Eltze <artjom31415 at googlemail.com> |
License: | GPL-3 |
URL: | https://github.com/const-ae/tidygenomics |
NeedsCompilation: | yes |
Materials: | README NEWS |
CRAN checks: | tidygenomics results |
Reference manual: | tidygenomics.pdf |
Vignettes: |
Tidy Genomics |
Package source: | tidygenomics_0.1.2.tar.gz |
Windows binaries: | r-devel: tidygenomics_0.1.2.zip, r-release: tidygenomics_0.1.2.zip, r-oldrel: tidygenomics_0.1.2.zip |
macOS binaries: | r-release: tidygenomics_0.1.2.tgz, r-oldrel: tidygenomics_0.1.2.tgz |
Old sources: | tidygenomics archive |
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