Exact tests for Linkage Disequilibrium (LD) and Hardy-Weinberg Equilibrium (HWE). - 2-sided LD tests based on different measures of LD (Kulinskaya and Lewin 2008) - 1-sided Fisher's exact test for LD - 2-sided Haldane test for HWE (Wiggington 2005) - 1-sided test for inbreeding - conditional p-values proposed in Kulinskaya (2008) to overcome the problems of asymetric distributions (for both LD and HWE)
| Version: | 1.0 |
| Published: | 2008-06-09 |
| Author: | Alex Lewin |
| Maintainer: | Alex Lewin <a.m.lewin at imperial.ac.uk> |
| License: | GPL-2 | GPL-3 [expanded from: GPL] |
| NeedsCompilation: | no |
| CRAN checks: | LDtests results |
| Reference manual: | LDtests.pdf |
| Package source: | LDtests_1.0.tar.gz |
| Windows binaries: | r-devel: LDtests_1.0.zip, r-release: LDtests_1.0.zip, r-oldrel: LDtests_1.0.zip |
| macOS binaries: | r-release: LDtests_1.0.tgz, r-oldrel: LDtests_1.0.tgz |
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