Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.
| Version: | 0.6.3 |
| Depends: | igraph, infotheo |
| Imports: | corpcor, huge, vegan |
| Published: | 2017-06-05 |
| Author: | Benjamin Blonder, Naia Morueta-Holme |
| Maintainer: | Benjamin Blonder <bblonder at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | netassoc results |
| Reference manual: | netassoc.pdf |
| Package source: | netassoc_0.6.3.tar.gz |
| Windows binaries: | r-devel: netassoc_0.6.3.zip, r-release: netassoc_0.6.3.zip, r-oldrel: netassoc_0.6.3.zip |
| macOS binaries: | r-release: netassoc_0.6.3.tgz, r-oldrel: netassoc_0.6.3.tgz |
| Old sources: | netassoc archive |
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