vegan: Community Ecology Package

Ordination methods, diversity analysis and other functions for community and vegetation ecologists.

Version: 2.5-6
Depends: permute (≥ 0.9-0), lattice, R (≥ 3.4.0)
Imports: MASS, cluster, mgcv
Suggests: parallel, tcltk, knitr
Published: 2019-09-01
Author: Jari Oksanen, F. Guillaume Blanchet, Michael Friendly, Roeland Kindt, Pierre Legendre, Dan McGlinn, Peter R. Minchin, R. B. O'Hara, Gavin L. Simpson, Peter Solymos, M. Henry H. Stevens, Eduard Szoecs, Helene Wagner
Maintainer: Jari Oksanen <jhoksane at gmail.com>
BugReports: https://github.com/vegandevs/vegan/issues
License: GPL-2
URL: https://cran.r-project.org, https://github.com/vegandevs/vegan
NeedsCompilation: yes
Materials: NEWS
In views: Environmetrics, Multivariate, Phylogenetics, Psychometrics, Spatial
CRAN checks: vegan results

Downloads:

Reference manual: vegan.pdf
Vignettes: Design decisions and implementation
Diversity analysis in vegan
Introduction to ordination in vegan
Partition of Variation
vegan FAQ
Package source: vegan_2.5-6.tar.gz
Windows binaries: r-devel: vegan_2.5-6.zip, r-release: vegan_2.5-6.zip, r-oldrel: vegan_2.5-6.zip
macOS binaries: r-release: vegan_2.5-6.tgz, r-oldrel: vegan_2.5-6.tgz
Old sources: vegan archive

Reverse dependencies:

Reverse depends: analogue, BBI, BDMMAcorrect, betaper, BiodiversityR, bipartite, blender, cocorresp, collpcm, CommEcol, CommunityCorrelogram, dave, easyCODA, FD, flowDiv, FreeSortR, GUniFrac, iDynoR, isopam, KnowBR, mcaGUI, metacom, MiSPU, mpmcorrelogram, ordiBreadth, OTUbase, otuSummary, paleoMAS, picante, RAM, rareNMtests, segRDA, simba, vegan3d
Reverse imports: abseqR, adegenet, adespatial, animalcules, aPCoA, Arothron, BAT, bingat, biogeo, CAGEr, cassandRa, cati, codyn, combi, DarkDiv, dartR, Demerelate, dispRity, DiversityOccupancy, dynRB, ecospat, entropart, EvaluateCore, evolqg, fieldRS, flowCHIC, flowCyBar, forams, gdm, goeveg, GPA, graph4lg, grapherator, HierDpart, hilldiv, HMP, HTSSIP, LinkHD, Linnorm, Maaslin2, mcMST, MEAL, MEclustnet, MEDITS, memgene, metacoder, metavizr, microbiome, MicrobiotaProcess, MIGSA, mirt, mixKernel, mobsim, Momocs, netassoc, netcom, nodiv, NST, omicplotR, paco, palaeoSig, PathoStat, patternize, PCPS, pez, phyloregion, phyloseq, PopGenReport, poppr, powerTCR, ProjectionBasedClustering, RaceID, Rarefy, RCM, recluster, rich, rioja, RTCC, RVAideMemoire, RVenn, shapeR, sharpshootR, SigTree, smartR, soundecology, spaceNet, SparseLPM, spmoran, SSP, SYNCSA, tidyMicro, TimeSeriesExperiment, tspmeta, vegclust, zetadiv, zooaRchGUI
Reverse suggests: abdiv, ALA4R, balance, bcp, betapart, bipartiteD3, BIRDS, clonotypeR, codep, dimRed, divDyn, EcoGenetics, EcoIndR, ecolottery, ecospace, eHOF, enveomics.R, epiphy, GCalignR, GOsummaries, idar, interactiveDisplay, liayson, loe, mefa, metagenomeSeq, MiRKAT, MMUPHin, permute, phylotools, primer, ProcMod, pRoloc, propr, PtH2O2lipids, raptr, Rraven, RRphylo, sads, shipunov, spaa, taxize, themetagenomics, vegdata, vegtable, WeightedCluster, yaImpute
Reverse enhances: labdsv

Linking:

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