permute: Functions for Generating Restricted Permutations of Data

A set of restricted permutation designs for freely exchangeable, line transects (time series), and spatial grid designs plus permutation of blocks (groups of samples) is provided. 'permute' also allows split-plot designs, in which the whole-plots or split-plots or both can be freely-exchangeable or one of the restricted designs. The 'permute' package is modelled after the permutation schemes of 'Canoco 3.1' (and later) by Cajo ter Braak.

Version: 0.9-5
Depends: R (≥ 2.14.0)
Imports: stats
Suggests: vegan (≥ 2.0-0), testthat (≥ 0.5), parallel
Published: 2019-03-12
Author: Gavin L. Simpson ORCID iD [aut, cph, cre], R Core Team [cph], Douglas M. Bates [ctb], Jari Oksanen [ctb]
Maintainer: Gavin L. Simpson <ucfagls at gmail.com>
BugReports: https://github.com/gavinsimpson/permute/issues
License: GPL-2
Copyright: see file COPYRIGHTS
URL: https://github.com/gavinsimpson/permute
NeedsCompilation: no
Materials: README NEWS ChangeLog
CRAN checks: permute results

Downloads:

Reference manual: permute.pdf
Vignettes: Restricted permutations; using the permute package
Package source: permute_0.9-5.tar.gz
Windows binaries: r-devel: permute_0.9-5.zip, r-release: permute_0.9-5.zip, r-oldrel: permute_0.9-5.zip
macOS binaries: r-release: permute_0.9-5.tgz, r-oldrel: permute_0.9-5.tgz
Old sources: permute archive

Reverse dependencies:

Reverse depends: indicspecies, Storm, vegan
Reverse imports: bipartite, brainGraph, bsseq, Clomial, codyn, cwm, HierDpart, MEAL, MiRKAT, mixAR, NPC, npcure, NST, OmicsMarkeR, permuco, pRF, ProcMod, RAM, randomizationInference, rankdist, spaceNet, SYNCSA, VdgRsm
Reverse suggests: BiodiversityR

Linking:

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