A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.
| Version: | 0.8.1 |
| Imports: | directlabels (≥ 1.1), gdata (≥ 2.6.0), ggplot2 (≥ 0.8.9), pedigree (≥ 1.3.1), Rcpp (≥ 0.9.4), reshape |
| LinkingTo: | Rcpp |
| Suggests: | RColorBrewer (≥ 1.0-2), truncnorm (≥ 1.0-5), knitr, rmarkdown, testthat |
| Published: | 2020-03-25 |
| Author: | Gregor Gorjanc, Jana Obsteter |
| Maintainer: | Jana Obšteter <jana.obsteter at kis.si> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| CRAN checks: | AlphaPart results |
| Reference manual: | AlphaPart.pdf |
| Vignettes: |
AlphaPart |
| Package source: | AlphaPart_0.8.1.tar.gz |
| Windows binaries: | r-devel: AlphaPart_0.8.1.zip, r-release: AlphaPart_0.8.1.zip, r-oldrel: AlphaPart_0.8.1.zip |
| macOS binaries: | r-release: AlphaPart_0.8.1.tgz, r-oldrel: AlphaPart_0.8.1.tgz |
| Old sources: | AlphaPart archive |
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