Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.
| Version: | 0.1.21 |
| Depends: | R (≥ 3.3.0) |
| Imports: | MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics, biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments, grDevices, graphics, stats, utils, mclust, GSVA, circlize |
| Suggests: | knitr, rmarkdown |
| Published: | 2018-07-24 |
| Author: | Andrew Dhawan [aut], Alessandro Barberis [aut], Wei-Chen Cheng [aut], Francesca Buffa [aut, cre] |
| Maintainer: | Francesca Buffa <francesca.buffa at oncology.ox.ac.uk> |
| License: | file LICENSE |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | sigQC results |
| Reference manual: | sigQC.pdf |
| Vignettes: |
"sigQC: Gene Signature Quality Control" |
| Package source: | sigQC_0.1.21.tar.gz |
| Windows binaries: | r-devel: sigQC_0.1.21.zip, r-release: sigQC_0.1.21.zip, r-oldrel: sigQC_0.1.21.zip |
| macOS binaries: | r-release: not available, r-oldrel: sigQC_0.1.21.tgz |
| Old sources: | sigQC archive |
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