Implementation of ADMIXTURE for individual ancestry inference in R. Specifically, ADMIXTURE is a software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets, see <https://www.genetics.ucla.edu/software/admixture/>. Users can use 'radmixture' to calculate ancestry components with different public datasets. It is very convenient and fast for personal genotype data. For more details, see <https://github.com/wegene-llc/radmixture/blob/master/README.md>.
| Version: | 0.0.1 |
| Depends: | R (≥ 3.1.0) |
| Imports: | quadprog, plyr, magrittr, MCMCpack |
| Suggests: | rmarkdown, knitr, testthat |
| Published: | 2017-03-13 |
| Author: | Beilei Bian [aut, cre], Dajun Luo [ctb] (R's C API), Gang Chen [ctb], Senwei Tang [ctb], WeGene [cph] |
| Maintainer: | Beilei Bian <bianbeilei at wegene.com> |
| BugReports: | https://github.com/wegene-llc/radmixture/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/wegene-llc/radmixture |
| NeedsCompilation: | yes |
| CRAN checks: | radmixture results |
| Reference manual: | radmixture.pdf |
| Vignettes: |
Introduction |
| Package source: | radmixture_0.0.1.tar.gz |
| Windows binaries: | r-devel: radmixture_0.0.1.zip, r-release: radmixture_0.0.1.zip, r-oldrel: radmixture_0.0.1.zip |
| macOS binaries: | r-release: radmixture_0.0.1.tgz, r-oldrel: radmixture_0.0.1.tgz |
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