Wrapper functions that interface with 'Freesurfer' <https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.
Version: | 1.6.7 |
Depends: | R (≥ 3.2.0) |
Imports: | methods, neurobase, tools, R.utils, reshape2, utils |
Suggests: | magrittr, knitr, oro.nifti (≥ 0.7), rgl, rmarkdown, pander, fslr (≥ 2.9.2) |
Published: | 2020-03-30 |
Author: | John Muschelli |
Maintainer: | John Muschelli <muschellij2 at gmail.com> |
BugReports: | https://github.com/muschellij2/freesurfer/issues |
License: | GPL-3 |
NeedsCompilation: | no |
SystemRequirements: | Freesurfer (https://surfer.nmr.mgh.harvard.edu/) |
Citation: | freesurfer citation info |
Materials: | README NEWS |
CRAN checks: | freesurfer results |
Reference manual: | freesurfer.pdf |
Vignettes: |
Exploring Included Subject Freesurfer Data |
Package source: | freesurfer_1.6.7.tar.gz |
Windows binaries: | r-devel: freesurfer_1.6.7.zip, r-release: freesurfer_1.6.7.zip, r-oldrel: freesurfer_1.6.7.zip |
macOS binaries: | r-release: freesurfer_1.6.7.tgz, r-oldrel: freesurfer_1.6.7.tgz |
Old sources: | freesurfer archive |
Please use the canonical form https://CRAN.R-project.org/package=freesurfer to link to this page.