Provides methods for extracting from a weighted graph a binary or signed backbone that retains only the significant edges. The user may input a weighted graph, or a bipartite graph from which a weighted graph is first constructed via projection. Backbone extraction methods include the stochastic degree sequence model (Neal, Z. P. (2014). <doi:10.1016/j.socnet.2014.06.001>), hypergeometric model (Neal, Z. (2013). <doi:10.1007/s13278-013-0107-y>), the fixed degree sequence model (Zweig, K. A., and Kaufmann, M. (2011). <doi:10.1007/s13278-011-0021-0>), as well as a universal threshold method.
| Version: | 1.2.1 |
| Depends: | R (≥ 2.10) |
| Imports: | Matrix, methods, stats, utils, CVXR, igraph, network, Rcpp |
| LinkingTo: | Rcpp |
| Suggests: | knitr, rmarkdown, speedglm, testthat |
| Published: | 2020-07-03 |
| Author: | Rachel Domagalski [aut, cre], Zachary Neal [aut], Bruce Sagan [aut] |
| Maintainer: | Rachel Domagalski <domagal9 at msu.edu> |
| BugReports: | https://github.com/domagal9/backbone/issues |
| License: | GPL-3 |
| URL: | https://github.com/domagal9/backbone, https://www.zacharyneal.com/backbone |
| NeedsCompilation: | yes |
| Citation: | backbone citation info |
| Materials: | README NEWS |
| CRAN checks: | backbone results |
| Reference manual: | backbone.pdf |
| Vignettes: |
backbone |
| Package source: | backbone_1.2.1.tar.gz |
| Windows binaries: | r-devel: backbone_1.2.1.zip, r-release: backbone_1.2.1.zip, r-oldrel: backbone_1.2.1.zip |
| macOS binaries: | r-release: backbone_1.2.1.tgz, r-oldrel: backbone_1.2.1.tgz |
| Old sources: | backbone archive |
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