[aut, cre]Similarity plots based on correlation and median absolute deviation (MAD); adjusting colors for heatmaps; aggregate technical replicates; calculate pairwise fold-changes and log fold-changes; compute one- and two-way ANOVA; simplified interface to package 'limma' (Ritchie et al. (2015), <doi:10.1093/nar/gkv007> ) for moderated t-test and one-way ANOVA; Hamming and Levenshtein (edit) distance of strings as well as optimal alignment scores for global (Needleman-Wunsch) and local (Smith-Waterman) alignments with constant gap penalties (Merkl and Waack (2009), ISBN:978-3-527-32594-8).
| Version: | 0.5 |
| Depends: | R (≥ 3.5.0) |
| Imports: | stats, utils, graphics, grDevices, RColorBrewer, robustbase, limma |
| Suggests: | knitr, rmarkdown |
| Published: | 2020-02-19 |
| Author: | Matthias Kohl
[aut, cre] |
| Maintainer: | Matthias Kohl <Matthias.Kohl at stamats.de> |
| License: | LGPL-3 |
| URL: | http://www.stamats.de/ |
| NeedsCompilation: | no |
| Citation: | MKomics citation info |
| Materials: | NEWS |
| CRAN checks: | MKomics results |
| Reference manual: | MKomics.pdf |
| Vignettes: |
MKomics |
| Package source: | MKomics_0.5.tar.gz |
| Windows binaries: | r-devel: MKomics_0.5.zip, r-release: MKomics_0.5.zip, r-oldrel: MKomics_0.5.zip |
| macOS binaries: | r-release: MKomics_0.5.tgz, r-oldrel: MKomics_0.5.tgz |
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