Enable optimization of parameters of ordinary differential equations. Therefore, using 'SUNDIALS' to solve the ODE-System (see Hindmarsh, Alan C., Peter N. Brown, Keith E. Grant, Steven L. Lee, Radu Serban, Dan E. Shumaker, and Carol S. Woodward. (2005) <doi:10.1145/1089014.1089020>). Furthermore, for optimization the particle swarm algorithm is used (see: Akman, Devin, Olcay Akman, and Elsa Schaefer. (2018) <doi:10.1155/2018/9160793> and Sengupta, Saptarshi, Sanchita Basak, and Richard Peters. (2018) <doi:10.3390/make1010010>). The ODE-System has to be passed as 'Rcpp'-function. The information for the parameter boundaries and states are conveyed using text-files.
| Version: | 0.1 |
| Imports: | Rcpp (≥ 1.0.4) |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | knitr, rmarkdown |
| Published: | 2020-07-06 |
| Author: | Krämer Konrad [aut, cre],
Krämer Johannes [aut],
Heyer Arnd [ths],
University of Stuttgart [uvp],
Institute of Biomaterials and Biomolecular Systems at the University of Stuttgart [his]
| file AUTHORS paropt author details |
| Maintainer: | Krämer Konrad <Konrad_kraemer at yahoo.de> |
| License: | GPL-3 | file LICENSE |
| Copyright: | file COPYRIGHTS paropt copyright details |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| CRAN checks: | paropt results |
| Reference manual: | paropt.pdf |
| Vignettes: |
paropt |
| Package source: | paropt_0.1.tar.gz |
| Windows binaries: | r-devel: paropt_0.1.zip, r-release: paropt_0.1.zip, r-oldrel: paropt_0.1.zip |
| macOS binaries: | r-release: paropt_0.1.tgz, r-oldrel: paropt_0.1.tgz |
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