Implements macroevolutionary analyses on phylogenetic trees. See Morlon et al. (2010) <doi:10.1371/journal.pbio.1000493>, Morlon et al. (2011) <doi:10.1073/pnas.1102543108>, Condamine et al. (2013) <doi:10.1111/ele.12062>, Morlon et al. (2014) <doi:10.1111/ele.12251>, Manceau et al. (2015) <doi:10.1111/ele.12415>, Lewitus & Morlon (2016) <doi:10.1093/sysbio/syv116>, Drury et al. (2016) <doi:10.1093/sysbio/syw020>, Manceau et al. (2016) <doi:10.1093/sysbio/syw115>, Morlon et al. (2016) <doi:10.1111/2041-210X.12526>, Clavel & Morlon (2017) <doi:10.1073/pnas.1606868114>, Drury et al. (2017) <doi:10.1093/sysbio/syx079>, Lewitus & Morlon (2017) <doi:10.1093/sysbio/syx095>, Drury et al. (2018) <doi:10.1371/journal.pbio.2003563>, Clavel et al. (2019) <doi:10.1093/sysbio/syy045>, Maliet et al. (2019) <doi:10.1038/s41559-019-0908-0>, Billaud et al. (2019) <doi:10.1093/sysbio/syz057>, Lewitus et al. (2019) <doi:10.1093/sysbio/syz061>, and Aristide & Morlon (2019) <doi:10.1111/ele.13385>.
| Version: | 1.8 |
| Depends: | R (≥ 2.14.2), picante, methods |
| Imports: | ape, pspline, deSolve, igraph, TESS, cluster, fpc, pvclust, corpcor, phytools, mvMORPH (≥ 1.1.0), stats, graphics, grDevices, utils, geiger, mvtnorm, Matrix, pracma, glassoFast, Rmpfr, fields, coda, parallel |
| Suggests: | testthat |
| Published: | 2020-03-06 |
| Author: | Hélène Morlon [aut, cre, cph], Eric Lewitus [aut, cph], Fabien Condamine [aut, cph], Marc Manceau [aut, cph], Julien Clavel [aut, cph], Jonathan Drury [aut, cph], Olivier Billaud [aut, cph], Odile Maliet [aut, cph], Leandro Aristide [aut, cph] |
| Maintainer: | Hélène Morlon <helene.morlon at bio.ens.psl.eu> |
| License: | GPL-2 |
| URL: | https://github.com/hmorlon/PANDA |
| NeedsCompilation: | yes |
| Citation: | RPANDA citation info |
| Materials: | README |
| CRAN checks: | RPANDA results |
| Reference manual: | RPANDA.pdf |
| Package source: | RPANDA_1.8.tar.gz |
| Windows binaries: | r-devel: RPANDA_1.8.zip, r-release: RPANDA_1.8.zip, r-oldrel: RPANDA_1.8.zip |
| macOS binaries: | r-release: RPANDA_1.8.tgz, r-oldrel: RPANDA_1.8.tgz |
| Old sources: | RPANDA archive |
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