Concordance and discordance of homologous gene regulation allows comparing reaction to stimuli in different organisms, for example human patients and animal models of a disease. The package contains functions to calculate discordance and concordance score for homologous gene pairs, identify concordantly or discordantly regulated transcriptional modules and visualize the results. It is intended for analysis of transcriptional data.
| Version: | 0.6 |
| Depends: | R (≥ 2.10) |
| Imports: | methods, ggplot2, tmod, RColorBrewer |
| Published: | 2018-07-02 |
| Author: | Teresa Domaszewska [aut, cre], January Weiner [aut] |
| Maintainer: | Teresa Domaszewska <domaszewska at mpiib-berlin.mpg.de> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)] |
| NeedsCompilation: | no |
| CRAN checks: | disco results |
| Reference manual: | disco.pdf |
| Package source: | disco_0.6.tar.gz |
| Windows binaries: | r-devel: disco_0.6.zip, r-release: disco_0.6.zip, r-oldrel: disco_0.6.zip |
| macOS binaries: | r-release: disco_0.6.tgz, r-oldrel: disco_0.6.tgz |
| Old sources: | disco archive |
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