[aut, cre, cph]Performs stability analysis of multi-environment trial data using parametric and non-parametric methods. Parametric methods includes Additive Main Effects and Multiplicative Interaction (AMMI) analysis by Gauch (2013) <doi:10.2135/cropsci2013.04.0241>, Genotype plus Genotype-Environment (GGE) biplot analysis by Yan & Kang (2003) <doi:10.1201/9781420040371>, joint Regression Analysis by Eberhart & Russel (1966) (<doi:10.2135/cropsci1966.0011183X000600010011x>), ecovalence by Wricke (1965), genotypic confidence index by Annicchiarico (1992), Murakami & Cruz's (2004) method <doi:10.12702/1984-7033.v04n01a02>, stability variance by Shukla (1972) <doi:10.1038/hdy.1972.87>, weighted average of absolute scores by Olivoto et al. (2019a) <doi:10.2134/agronj2019.03.0220>, and multi-trait stability index by Olivoto et al. (2019b) <doi:10.2134/agronj2019.03.0221>. Non-parametric methods includes superiority index by Lin & Binns (1988) <doi:10.4141/cjps88-018>, nonparametric measures of phenotypic stability by Huehn (1990) <https://link.springer.com/article/10.1007/BF00024241>, TOP third statistic by Fox et al. (1990) <doi:10.1007/BF00040364>, geometric adaptability index described by Shahbazi (2019) <doi:10.1016/j.scienta.2019.04.047>. Functions for computing biometrical analysis such as path analysis, canonical correlation, partial correlation, clustering analysis, and tools for inspecting, manipulating, summarizing and plotting typical multi-environment trial data are also provided.
| Version: | 1.7.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | ade4, cowplot, dplyr (≥ 1.0.0), FWDselect, GGally, ggforce, ggplot2 (≥ 3.3.0), ggrepel, grid, lme4, lmerTest, magrittr, methods, progress, purrr, rlang (≥ 0.1.2), tibble, tidyr, tidyselect (≥ 1.0.0) |
| Suggests: | DT, knitr, mathjaxr, readxl, rmarkdown, roxygen2 |
| Published: | 2020-07-18 |
| Author: | Tiago Olivoto
[aut, cre, cph] |
| Maintainer: | Tiago Olivoto <tiagoolivoto at gmail.com> |
| BugReports: | https://github.com/TiagoOlivoto/metan/issues |
| License: | GPL-3 |
| URL: | https://github.com/TiagoOlivoto/metan |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | metan citation info |
| Materials: | NEWS |
| CRAN checks: | metan results |
| Reference manual: | metan.pdf |
| Vignettes: |
Multi-environment Trial Analysis |
| Package source: | metan_1.7.0.tar.gz |
| Windows binaries: | r-devel: metan_1.7.0.zip, r-release: metan_1.7.0.zip, r-oldrel: metan_1.7.0.zip |
| macOS binaries: | r-release: metan_1.7.0.tgz, r-oldrel: metan_1.7.0.tgz |
| Old sources: | metan archive |
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