Implements the Range Ancestral State Estimation for phylogeography described in Quintero, I., Keil, P., Jetz, W., & Crawford, F. W. (2015) <doi:10.1093/sysbio/syv057>. It also includes Bayesian inference of ancestral states under a Brownian Motion model of character evolution and Maximum Likelihood estimation of rase for n-dimensional data. Visualizing functions in 3D are implemented using the rgl package.
| Version: | 0.3-3 |
| Depends: | R (≥ 2.14.0), ape (≥ 3.1-0), polyCub (≥ 0.5-0), spatstat (≥ 1.36-0) |
| Imports: | mvtnorm (≥ 1.0-0), rgl, sm, methods, grDevices, stats |
| Suggests: | sp, coda, rpanel |
| Published: | 2017-09-22 |
| Author: | Ignacio Quintero [aut, cre], Forrest W. Crawford [aut], Petr Keil [aut] |
| Maintainer: | Ignacio Quintero <ignacio.quintero at yale.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Citation: | rase citation info |
| Materials: | README |
| CRAN checks: | rase results |
| Reference manual: | rase.pdf |
| Package source: | rase_0.3-3.tar.gz |
| Windows binaries: | r-devel: rase_0.3-3.zip, r-release: rase_0.3-3.zip, r-oldrel: rase_0.3-3.zip |
| macOS binaries: | r-release: rase_0.3-3.tgz, r-oldrel: rase_0.3-3.tgz |
| Old sources: | rase archive |
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