SKAT: SNP-Set (Sequence) Kernel Association Test
Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
| Version: |
2.0.0 |
| Depends: |
R (≥ 2.13.0), Matrix, SPAtest |
| Published: |
2020-03-09 |
| Author: |
Seunggeun (Shawn) Lee and Zhangchen Zhao, with contributions from Larisa Miropolsky and Michael Wu |
| Maintainer: |
Seunggeun (Shawn) Lee <lee7801 at snu.ac.kr> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
yes |
| CRAN checks: |
SKAT results |
Downloads:
Reverse dependencies:
| Reverse depends: |
FSTpackage, GenoScan, LGEWIS, LGRF, Mega2R, WGScan |
| Reverse imports: |
GBJ, MetaSKAT, SMUT, zfa |
| Reverse suggests: |
BGData, FastKM, seqminer |
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