Implements Affinity Propagation clustering introduced by Frey and
Dueck (2007) <doi:10.1126/science.1136800>. The algorithms are largely
analogous to the 'Matlab' code published by Frey and Dueck.
The package further provides leveraged affinity propagation and an
algorithm for exemplar-based agglomerative clustering that can also be
used to join clusters obtained from affinity propagation. Various
plotting functions are available for analyzing clustering results.
| Version: |
1.4.8 |
| Depends: |
R (≥ 3.0.0) |
| Imports: |
Rcpp (≥ 0.11.1), methods, Matrix, stats, graphics, grDevices |
| LinkingTo: |
Rcpp |
| Suggests: |
Biostrings, kebabs (≥ 1.5.4), knitr |
| Published: |
2019-08-21 |
| Author: |
Ulrich Bodenhofer, Johannes Palme, Chrats Melkonian, Andreas Kothmeier,
Nikola Kostic |
| Maintainer: |
Ulrich Bodenhofer <bodenhofer at bioinf.jku.at> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: |
http://www.bioinf.jku.at/software/apcluster/
https://github.com/UBod/apcluster |
| NeedsCompilation: |
yes |
| Citation: |
apcluster citation info |
| Materials: |
README NEWS |
| In views: |
Cluster |
| CRAN checks: |
apcluster results |