A complete analysis pipeline for matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional mass spectrometry data. In addition to commonly used plotting and processing methods it includes distinctive features, namely baseline subtraction methods such as morphological filters (TopHat) or the statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.
Version: | 1.19.3 |
Depends: | R (≥ 3.2.0), methods |
Imports: | parallel |
Suggests: | knitr, testthat (≥ 0.8) |
Published: | 2019-05-12 |
Author: | Sebastian Gibb [aut, cre], Korbinian Strimmer [ths] |
Maintainer: | Sebastian Gibb <mail at sebastiangibb.de> |
BugReports: | https://github.com/sgibb/MALDIquant/issues/ |
License: | GPL (≥ 3) |
URL: | http://strimmerlab.org/software/maldiquant/ https://github.com/sgibb/MALDIquant/ |
NeedsCompilation: | yes |
Citation: | MALDIquant citation info |
Materials: | NEWS |
In views: | ChemPhys |
CRAN checks: | MALDIquant results |
Reference manual: | MALDIquant.pdf |
Vignettes: |
MALDIquant: Quantitative Analysis of Mass Spectrometry Data |
Package source: | MALDIquant_1.19.3.tar.gz |
Windows binaries: | r-devel: MALDIquant_1.19.3.zip, r-release: MALDIquant_1.19.3.zip, r-oldrel: MALDIquant_1.19.3.zip |
macOS binaries: | r-release: MALDIquant_1.19.3.tgz, r-oldrel: MALDIquant_1.19.3.tgz |
Old sources: | MALDIquant archive |
Reverse depends: | MALDIquantForeign, MGMS2 |
Reverse imports: | MSnbase |
Reverse suggests: | RforProteomics, xcms |
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