CRAN Package Check Results for Maintainer ‘Robert Bauer <robert.bauer at ird.fr>’

Last updated on 2020-08-07 01:50:31 CEST.

Package IRATER

Current CRAN status: ERROR: 2, OK: 7

Version: 0.0.1
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘coda’ ‘lattice’
     All declared Imports should be used.
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.1
Check: examples
Result: ERROR
    Running examples in ‘IRATER-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clean.admb
    > ### Title: delete IRATE (ADMB) run files
    > ### Aliases: clean.admb clean.IRATE
    >
    > ### ** Examples
    >
    > example.setup <- IRATE.examples()
    > new.setup <- new.setup.path <- example.setup[1] # select old IRATE setup to reparameterize
    > print(new.setup) # print setup name to be run
    [1] "HoenigNonMixing"
    > old.setup.path <- system.file(paste0("IRATE.examples/",new.setup,".dat"), package = "IRATER")
    >
    > system(paste("mkdir -p ",new.setup.path)) # create run folder for new setup
    > system(paste("cp",old.setup.path, new.setup.path)) # copy old setup in new run folder
    > setwd(new.setup.path)
    >
    > run.IRATE(new.setup) # compile and run setup
    sh: admb: command not found
    Error in R2admb::compile_admb(setup.file, safe = safe, re = re, verbose = verbose, :
     base admb command failed: run setup_admb(), or check ADMB installation
    Calls: run.IRATE -> <Anonymous>
    Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64