Last updated on 2020-08-07 01:49:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.1 | 3.54 | 31.99 | 35.53 | OK | --no-examples --no-tests --no-vignettes |
| r-devel-linux-x86_64-debian-gcc | 0.0.1 | 2.79 | 23.83 | 26.62 | OK | --no-examples --no-tests --no-vignettes |
| r-devel-windows-ix86+x86_64 | 0.0.1 | 10.00 | 50.00 | 60.00 | OK | --no-examples --no-tests --no-vignettes |
| r-patched-linux-x86_64 | 0.0.1 | 4.12 | 30.86 | 34.98 | OK | --no-examples --no-tests --no-vignettes |
| r-release-linux-x86_64 | 0.0.1 | 4.16 | 30.33 | 34.49 | OK | --no-examples --no-tests --no-vignettes |
| r-release-macos-x86_64 | 0.0.1 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 0.0.1 | 10.00 | 69.00 | 79.00 | OK | --no-examples --no-tests --no-vignettes |
| r-oldrel-macos-x86_64 | 0.0.1 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.0.1 | 7.00 | 65.00 | 72.00 | OK | --no-examples --no-tests --no-vignettes |
Version: 0.0.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘coda’ ‘lattice’
All declared Imports should be used.
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.0.1
Check: examples
Result: ERROR
Running examples in ‘IRATER-Ex.R’ failed
The error most likely occurred in:
> ### Name: clean.admb
> ### Title: delete IRATE (ADMB) run files
> ### Aliases: clean.admb clean.IRATE
>
> ### ** Examples
>
> example.setup <- IRATE.examples()
> new.setup <- new.setup.path <- example.setup[1] # select old IRATE setup to reparameterize
> print(new.setup) # print setup name to be run
[1] "HoenigNonMixing"
> old.setup.path <- system.file(paste0("IRATE.examples/",new.setup,".dat"), package = "IRATER")
>
> system(paste("mkdir -p ",new.setup.path)) # create run folder for new setup
> system(paste("cp",old.setup.path, new.setup.path)) # copy old setup in new run folder
> setwd(new.setup.path)
>
> run.IRATE(new.setup) # compile and run setup
sh: admb: command not found
Error in R2admb::compile_admb(setup.file, safe = safe, re = re, verbose = verbose, :
base admb command failed: run setup_admb(), or check ADMB installation
Calls: run.IRATE -> <Anonymous>
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64