CRAN Package Check Results for Package drugCombo

Last updated on 2020-08-07 01:49:42 CEST.

Check Details

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘userGuide.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Using constraints: b = 1
    Using constraints: b = 1
    Running default monotherapy fitting. Note that if constraints are needed, run mono fitting manually first
    Using constraints: b = 1
    Using constraints: b = 1
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Warning in normalizePath(f2) :
     path[1]="webshot3859528a1983.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot3859528a1983.png': No such file or directory
    Quitting from lines 357-358 (userGuide.Rmd)
    Error: processing vignette 'userGuide.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘userGuide.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘userGuide.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘userGuide.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Using constraints: b = 1
    Using constraints: b = 1
    Running default monotherapy fitting. Note that if constraints are needed, run mono fitting manually first
    Using constraints: b = 1
    Using constraints: b = 1
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Warning in normalizePath(f2) :
     path[1]="webshot108755888790.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot108755888790.png': No such file or directory
    Quitting from lines 357-358 (userGuide.Rmd)
    Error: processing vignette 'userGuide.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘userGuide.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘userGuide.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-x86_64

Version: 1.1.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: dependencies in R code
Result: NOTE
    No protocol specified
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: S3 generic/method consistency
Result: WARN
    No protocol specified
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: replacement functions
Result: WARN
    No protocol specified
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: foreign function calls
Result: NOTE
    No protocol specified
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: R code for possible problems
Result: NOTE
    No protocol specified
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: for missing documentation entries
Result: WARN
    No protocol specified
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: for code/documentation mismatches
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: Rd \usage sections
Result: NOTE
    No protocol specified
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-oldrel-macos-x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘userGuide.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    No protocol specified
    Warning in rgl.init(initValue, onlyNULL) :
     RGL: unable to open X11 display
    Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
    Using constraints: b = 1
    Using constraints: b = 1
    Running default monotherapy fitting. Note that if constraints are needed, run mono fitting manually first
    Using constraints: b = 1
    Using constraints: b = 1
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Warning in normalizePath(f2) :
     path[1]="webshot219036569873.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file 'webshot219036569873.png': No such file or directory
    Quitting from lines 357-358 (userGuide.Rmd)
    Error: processing vignette 'userGuide.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘userGuide.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘userGuide.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-macos-x86_64