Last updated on 2020-08-07 01:50:16 CEST.
| Package | WARN | NOTE | OK |
|---|---|---|---|
| mpMap2 | 1 | 6 | 5 |
Current CRAN status: WARN: 1, NOTE: 6, OK: 5
Version: 1.0.3
Check: installed package size
Result: NOTE
installed size is 83.0Mb
sub-directories of 1Mb or more:
R 1.1Mb
libs 79.1Mb
mathematica 1.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘mpMap2.Rnw’ using Sweave
Warning in mpcross(founders = founders, finals = finals, pedigree = pedigreeSF, :
Removing data for 1 markers, because these markers have NA founder alleles
Error in validObject(.Object) :
invalid class “geneticData” object: 1: Coding error for marker D1M3: Founder allele 10 was not present in @hetData[[3]]
invalid class “geneticData” object: 2: Coding error for marker D1M4: Founder allele 2 was not present in @hetData[[4]]
invalid class “geneticData” object: 3: Coding error for marker D1M4: Founder allele 3 was not present in @hetData[[4]]
invalid class “geneticData” object: 4: Coding error for marker D1M4: Founder allele 4 was not present in @hetData[[4]]
invalid class “geneticData” object: 5: Coding error for marker D1M5: Founder allele 1 was not present in @hetData[[5]]
invalid class “geneticData” object: 6: Omitting details of further coding errors
Error: processing vignette 'mpMap2.Rnw' failed with diagnostics:
chunk 23 (label = rfExample)
Error : C stack usage 342594808 is too close to the limit
*** caught segfault ***
address 5, cause 'memory not mapped'
Error in parent.frame() :
'rho' must be an environment not promise: detected in C-level eval
Calls: <Anonymous> -> message -> parent.frame
Traceback:
1: parent.frame()
2: message(gettextf("--- failed re-building %s\n", sQuote(file)))
3: tools:::buildVignettes(dir = "/home/ripley/R/packages/tests32/mpMap2.Rcheck/vign_test/mpMap2", ser_elibs = "/tmp/RtmpBRaGkc/file4541a213a8b.rds")
An irrecoverable exception occurred. R is aborting now ...
Warning: stack imbalance in 'options', 10 then 9
Warning: stack imbalance in '{', 6 then 3
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘Heatplus’
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64