Last updated on 2020-08-07 01:49:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.3 | 1004.04 | 347.46 | 1351.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.3 | 782.22 | 255.66 | 1037.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.3 | 1903.79 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.3 | 1753.40 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0.3 | 2089.00 | 626.00 | 2715.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0.3 | 864.43 | 337.23 | 1201.66 | OK | |
| r-patched-solaris-x86 | 1.0.3 | 1549.80 | WARN | |||
| r-release-linux-x86_64 | 1.0.3 | 844.40 | 332.20 | 1176.60 | OK | |
| r-release-macos-x86_64 | 1.0.3 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 1.0.3 | 2049.00 | 704.00 | 2753.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.0.3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.3 | 1420.00 | 559.00 | 1979.00 | NOTE |
Version: 1.0.3
Check: installed package size
Result: NOTE
installed size is 83.0Mb
sub-directories of 1Mb or more:
R 1.1Mb
libs 79.1Mb
mathematica 1.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘mpMap2.Rnw’ using Sweave
Warning in mpcross(founders = founders, finals = finals, pedigree = pedigreeSF, :
Removing data for 1 markers, because these markers have NA founder alleles
Error in validObject(.Object) :
invalid class “geneticData” object: 1: Coding error for marker D1M3: Founder allele 10 was not present in @hetData[[3]]
invalid class “geneticData” object: 2: Coding error for marker D1M4: Founder allele 2 was not present in @hetData[[4]]
invalid class “geneticData” object: 3: Coding error for marker D1M4: Founder allele 3 was not present in @hetData[[4]]
invalid class “geneticData” object: 4: Coding error for marker D1M4: Founder allele 4 was not present in @hetData[[4]]
invalid class “geneticData” object: 5: Coding error for marker D1M5: Founder allele 1 was not present in @hetData[[5]]
invalid class “geneticData” object: 6: Omitting details of further coding errors
Error: processing vignette 'mpMap2.Rnw' failed with diagnostics:
chunk 23 (label = rfExample)
Error : C stack usage 342594808 is too close to the limit
*** caught segfault ***
address 5, cause 'memory not mapped'
Error in parent.frame() :
'rho' must be an environment not promise: detected in C-level eval
Calls: <Anonymous> -> message -> parent.frame
Traceback:
1: parent.frame()
2: message(gettextf("--- failed re-building %s\n", sQuote(file)))
3: tools:::buildVignettes(dir = "/home/ripley/R/packages/tests32/mpMap2.Rcheck/vign_test/mpMap2", ser_elibs = "/tmp/RtmpBRaGkc/file4541a213a8b.rds")
An irrecoverable exception occurred. R is aborting now ...
Warning: stack imbalance in 'options', 10 then 9
Warning: stack imbalance in '{', 6 then 3
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘Heatplus’
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64