tcgsaseq
tcgsaseq
is a package for analyzing RNA-seq data. The 2 main functions of the package are varseq
and tcgsa_seq
:
varseq
.tcgsa_seq
.The method implemented in this package is detailed in the following article:
Agniel D & Hejblum BP (2017). Variance component score test for time-course gene set analysis of longitudinal RNA-seq data, 2017, Biostatistics, 18(4):589-604. arXiv:1605.02351 DOI: 10.1093/biostatistics/kxx005
The easiest way to get tcgsaseq
is to install it from CRAN:
Or to get the development version from GitHub:
– Denis Agniel and Boris Hejblum