Fixed bug when collecting failed jobs. slurmR would fail to correctly list failed jobs and thus to collect outputs. This would also would affect when trying to collect partially resubmitted jobs.
Slurm options passed via opts_slurmR
are now passed to Slurm_*apply
as documented. Thanks to Gregory Penn (gregorypenn) who reported the bug.
slurmr_cmd
now expands the cmd_path
.
Increased code coverage.
The function wait_slurm()
is now exported and documented.
Each line in the written R script is now wrapped with a custom tryCatch
function (tcq
). On error, this new function will collect both the expression called, the error message, and will quit the R session, so now the user has a better description of possible errors, e.g. missing packages.
sluRm
to slurmR
.NEWS.md
file to track changes to the package.