NEWS

minval v.0.8-1

• An error with the downloadChEBI function when it was used in Windows OS was solved.
• The citation file was added.
• The link with sybilSBML was removed due the package was removed from CRAN

minval v.0.8

• validateSyntax function now returns FALSE values instead error return
• Minor changes in writeSBMLmod function were made

minval v.0.7

• A bug related to unmapped metabolites in checkBalance function was solved

minval v.0.6

• downloadChEBI function was added. This function can download any user-defined release of the ChEBI database.
• checkBalance function now includes support for decimal coefficients in stoichiometric reactions.
• characterizeReactions function was added.
• The RECON 2.04 and an unbalanced Glycolysis model in a human-readable format were included.
• The writeTSV and writeSBML functions were rewritten, the XML package dependency was removed and the support to convert modelOrg objects was added.
• Two vignettes were included
• The orphanMetabolites function was included and the orphanReactants and orphanProducts functions were added as wrappers.

minval v.0.5

• All functions were vectorized
• Functions to write TSV and SBML models were added
• A function to download the different releases of the ChEBI database was added

minval v.0.4

• A bug in reactants function was solved. It also affected the orphan.reactants function.

minval v.0.3

• A bug in products function was solved
• A bug related with spaces between metabolites was solved in several functions

minval v.0.2

• Some functions were rewrited
• A bug in the compartments function was solved.

minval v.0.1

• ChEBI database release 136 was added.
• The stoichiometric reactions from the reconstructon of the glutamate/glutamine cycle were added.