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Ensure that P-value lies between zero and one, which is not always true for 'double' approach applied on very sparse matrices with row-/col-sums equal to zero.
hypergeom.test
now throws warning in case of p-value identical to zero (two-sided test) and changes p-value using other p-value-approach
contact e-mail address changed to markus.boenn.sf@googlemail.com
minor changes in C-code run2x2
and runIx2
unit tests added
added functions for exclusive use by unit tests
added CITATION-file
fixed 'bug' in source hypergeom_IxJ.cpp
causing compile error on Solaris (relevant for R 3.3.0 and higher)
added hypergeom.test.list
, which is performs hypergeom.test
to a list of contingency tables with same population size. Only available for 2x2 tables until full code optimization.
fixed typo in output formation of test result
in case of two-sided test, the original minimum-likelihood approach for p-value calculation is not the default anymore. Instead the R-implementation in fisher.test
is used.
minor change in C-routine for 2x2x2 tables
bug-fix in routine for 2x2 tables
IxJ table transposed if J>I for speed improvement
specialized C-routines for 2x2, Ix2, IxJ contingency tables for speed improvement
2xI table transposed to Ix2 table for speed improvement