hillR 0.5.0
hill_phylo set of functions are now much faster after getting rid of ade4::newick2phylog().
- Replaced all
. in arguments with _ to standardize styles.
hill_phylo_parti_pairwise now calculate the node/tips by site matrix first to speed things up.
- Added progress bar to all
hill_xxx_parti_pairwise functions with .progress argument, which can be set to FALSE to turn it off.
hillR 0.3.0
- Added a
NEWS.md file to track changes to the package.
hill_func and hill_func_parti no longer standardize distance matrix to have max value of 1 by default.
- set
stand_dij = TRUE if want to do so.
hill_func_parti function now reports site similarity instead of dissimilarity, to be consistent with the hill_taxa_parti functions. Make sure to change your interpretations.
- Added
hill_phylo functions.