coef function from glmnet, due to a breaking change in glmnet.cv_gds which computes cross-validated generalized Dantzig selector.gds and gmus.coef.corrected_lasso, coef.gds, coef.gmu_lasso, and coef.gmus.print.corrected_lasso, print.cv_corrected_lasso, print.gds, print.gmu_lasso, and print.gmus.plot.corrected_lasso to also handle the case of a single regularization parameter.Rglpk on travis CI, so now this package is back in Imports, and lpSolveAPI is no longer used.Rglpk. Hence, for the development version Rglpk is back in Suggests, together with lpSolveAPI.Rglpk back to Imports and removed lpSolveAPI, as the latest version of Rglpk passes all tests on CRAN, including osX.Fixed random number seed issue which caused test to fail in R-devel.
Internal fix to fit_corrected_lasso and cv_corrected_lasso. Got rid of duplicated code by calling the function set_radius.
Since Rglpk does not install automatically on macOS, this package was moved from Imports to Suggests. In addition, lpSolveAPI was added to Suggests. This means that the package should build also on systems that do not have Rglpk, in particular the versions of macOS on CRAN.
The changes involved adding an optional linear solver from lpSolveAPI in the function musalgorithm().
Added a plot.gds function, which plots the coefficients estimated by fit_gds.
Internal adjustment, which removed importing of external packages into the namespace, and instead specified the functions explicitly using ::.
tidyverse has been removed from Suggests field DESCRIPTION. dplyr and tidyr have been added instead. Similarly, library(tidyverse) in the vignette has been replaced by library(dplyr), library(tidyr), and library(ggplot2).
hdme is now on CRAN.