germinationmetrics 0.1.4
NEW FUNCTIONS:
FourPHFfit.bulk - Wrapper function around FourPHFfit for multiple samples.GermIndex - Compute germination index according to Melville et al., (1980).EmergenceRateIndex - Compute emergence rate index according to Shmueli and Goldberg (1971), Bilbro and Wanjura (1982), and Fakorede and Ayoola (1980).
UPDATED FUNCTIONS:
FourPHFfit - Added more checks for the input arguments umax, umin, xp, tries and tmax.MeanGermPercent, MeanGermNumber, GermSynchrony, GermUncertainty, TimsonsIndex, GermRateGeorge, GermSpeed, GermSpeedAccumulated, FirstGermTime, GermValue, PeakValue, WeightGermPercent, t50, MeanGermRate, MeanGermTime, germination.indices, FourPHFfit and FourPHFfit.bulk - Fixed the check for uniformity of intervals to handle non-integer values correctly. Closes issue #3.(Thanks to Jonas Ohlsson [@jonasoh])TimsonsIndex and GermRateGeorge- Fixed to handle interval data other than days.
VIGNETTE:
- Fixed details of Median germination time in Table 3.
- Fixed typo in formula for CUG in Table 3.
- Added reference for Coefficient of variation of the germination time in Table 3.
- Reverted to using system certificates instead of RCurl ones for fetching and displaying version history as suggested by Prof. Brian Ripley (ripley@stats.ox.ac.uk).
OTHER NOTES:
- Error in case of non-uniform intervals converted to warning.
- Fixed documentation errors in
FourPHFfit and CVGermTime.
- Updated documentation for
GermSpeed, GermSpeedAccumulated, CUGerm MeanGermRate, SEGermRate, CVG, MeanGermTime, VarGermTime, SEGermTime, GermUncertainty, GermSynchrony, MeanGermPercent, MeanGermNumber, WeightGermPercent, TimsonsIndex, GermRateGeorge and GermSynchrony.
- Converted all equations in Rd files to
MathJaxusing mathjaxr
- Added long running examples to
\donttest in germination.indices, plot.FourPHFfit, gcdata and FourPHFfit.bulk.
germinationmetrics 0.1.3
NEW FUNCTIONS:
WeightGermPercent - Compute the Weighted germination percentage.germination.indices - wrapper function to compute germination indices in batch.
UPDATED FUNCTIONS:
CVGermTime - Fixed error in function name (CVSEGermTime).TimsonsIndex - Fixed error in method name (khanungar).GermSpeed and GermSpeedAccumulated - Updated with option to use percentage germination in addition to germination counts.GermSpeedCorrected - Updated with option to use GermSpeedAccumulated in addition to GermSpeed.GermValue - Updated with option to consider time from start of test in addition to time from onset of germination.
VIGNETTE:
- Fixed LATEX xcolor options clash issue in vignette.
OTHER NOTES:
- Updated documentation -
GermValue, MeanGermTime and TimsonsIndex.
germinationmetrics 0.1.2
OTHER NOTES:
- Removed non-ASCII symbols in
inst/REFERENCES.bib being used by Rdpack macro to enforce UTF-8 encoding.
- Added inline citations in documentation with Rdpack
\insertCite{}{} and replaced all \insertRef{}{} with \insertAllCited{}.
- Fixed https link issue in vignette.
- Added mirror set command in vignette.
- Added
XML, RCurl and httr to suggests.
germinationmetrics 0.1.1
NEW FUNCTIONS:
plot.FourPHFfit - plot method for FourPHFfit.
UPDATED FUNCTIONS:
FourPHFfit - Fixed code to accommodate changes in the new release of broom package.FourPHFfit - Separated plot method to new function plot.FourPHFfit.
VIGNETTE:
- Fixed LATEX xcolor options clash issue in vignette.
- Fixed issue with missing pandoc in case of r-release-osx-x86_64.
OTHER NOTES:
- Fixed citation information.
- Added zenodo and rdocumentation badges.
- Added CRAN installation instructions in Readme.
- Added logo.
germinationmetrics 0.1.0
germinationmetrics 0.0.0.9000