concurve 2.5.0
Major changes
curve_meta()
can now handle complex data structures from metafor
with clustered data.
curve_gen()
can now handle ANOVAs and robust linear regressions from the MASS
package.
concurve
is now intergrated with the cowplot
package for easier graphing.
- removed
tibble::tibble()
integration due to breakage in code.
expand_scale()
has been replaced with expansion()
within the inner workings of ggcurve()
and plot_compare()
due to the former function (expand_scale()
) being deprecated.
concurve 2.4.1
Major changes
- New function
curve_lmer()
for mixed-effects models
- Fixed a bug where
curve_meta()
could not utilize rma.mh()
or rma.peto()
from metafor
.
concurve 2.4.0
Major changes
curve_boot()
can utilize parametric Bca bootstrap methods to compute functions.
- Corrected error where order of labels in columns for
curve_boot()
tables was incorrect.
- Corrected error where order of labels in columns for
curve_meta()
tables was incorrect.
- Set minimum version of
R
to 3.5.0.
- included
install.packages("concurve", dep = TRUE)
as solution to installation problems for some individuals.
- Removed
MASS
, compiler
, and Rlang
from DESCRIPTION
IMPORTS
, since these weren’t used.
- Wrote new unit tests examing the class of each of the objects created from the functions.
Minor changes
ggcurve()
theme has been changed from theme_bw()
to theme_minimal()
.
- Several new examples in the “Examples in R” article.
concurve 2.3.0
Major changes
ggconcurve()
is now ggcurve()
.
ggcurve()
plots confidence (consonance) distributions, densities, likelihood, and deviance functions.
plot_curve()
is now deprecated. Please use ggcurve()
instead.
curve_compare()
compares two functions and calculates the area between the curve.
plot_compare()
allows two separate functions to be plotted and compared simultaneously.
curve_table()
produces publication-ready tables of relevant statistics.
curve_boot()
uses bootstrapping to approximate the consonance functions via the boot
and bcaboot
packages.
curve_lik()
produces likelihood functions by transforming the objects from the ProfileLikelihood
package.
Minor changes
- All functions now provide progress on how long it will take to complete the task.
- Interval widths are now provided as measures of precision.
concurve 2.1.0
Major changes
ggconcurve()
now plots both the P-values and CI level using both y-axes when the type = “consonance”. Previously, this was only possible via plot_concurve()
(which uses base R graphics) because ggplot2
had a bug in its last few versions, which inhibited proper transformations in the y-axis.
concurve 2.0.1
Major changes
plot_concurve()
now has “measure” as an item which allows for ratio measures to be logarithmically scaled on the x axis. There are two options, “default”, which is set as the default option and is for mean differences, and “ratio”, which will result in the axis being logarithmically scaled.
plot_concurve()
also now has a “fill” option which will allow users to choose the color of the plot.
concurve 2.0
Major changes
- The
plotpint()
function which plotted consonance functions has been repackaged into ggconcurve()
.
- The
plotsint()
function which plotted surprisal functions has been repackaged into ggconcurve()
.
- Functions can now also be plotted with base R via the
plot_concurve()
function.
- Consonance functions can be plotted as a pyramid (right side up) or inverted (upside down) via the “position” item in
ggconcurve()
.
- Null values (for means & ratios) can be plotted via the
ggconcurve()
function to show how much of the interval surrounds it.
- Log transformations included in all the plotting functions for ratio measures.
- Parallel programming has now been implemented into the computations via the
mclapply()
function from the parallel package.
concurve 1.08
Major changes
- Can produce consonance and surprisal functions for correlations via the
corrintervals()
function.
- Now able to construct consonance and surprisal functions from the point estiate, and confidence limits via the
rev_eng()
function.
- Graphs produced via the
plotpint()
or plotsint()
function now able to take custom titles, subtitles, x-axis titles, and captions.
concurve 1.07
Major changes
- Can now produce consonance and surprisal functions for survival data produced with the
survival
package.
concurve 1.06
Major changes
- Now contains documentation for producing interval functons in
Stata
.
Minor changes
- Default plots now contain grids, title, subtitle, and a caption.
- Updated figures in README and the ‘Examples in R’ vignette/article.