GCalignR 0.1.0.9000

Changes since release 0.1.0

Algorithm

• Retention times are not rounded to two decimals anymore. Calculations still capture a precision of two decimals for purely computational reasons.
• Within the aligned results, retention times correspond to the input values. Linear adjustments are only used internally and are documented within the Logfile found in the output.

Dependencies

The bioconductor package (MassSpecWavelet)[http://bioconductor.org/packages/MassSpecWavelet/] is added as in R solution for picking peaks from GC data.

warning messages

• Warnings addressing formatting issues are now more explicit and partly rephrased to avoid ambiguity

Plots

• Added horitontal axis to barplots summarising peak numbers in plot.GCalign
• Changed to more prominent colours in binary heatmaps with gc_heatmap

Vignette

• Extended workflow and more comprehensive explainations ___