CRAN Package Check Results for Maintainer ‘Jasjeet Singh Sekhon <sekhon at berkeley.edu>’

Last updated on 2020-08-07 01:50:32 CEST.

Package NOTE OK
Matching 12
multinomRob 12
rgenoud 12

Package Matching

Current CRAN status: OK: 12

Additional issues

valgrind

Package multinomRob

Current CRAN status: NOTE: 12

Version: 1.8-6.1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-6.1
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: 'rgenoud'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8-6.1
Check: R code for possible problems
Result: NOTE
    .onAttach: no visible global function definition for
     'packageDescription'
    genoudRob: no visible global function definition for 'genoud'
    get.XYdata: no visible global function definition for 'terms'
    get.xdata: no visible global function definition for 'terms'
    get.xdata: no visible global function definition for 'model.matrix'
    get.xy: no visible global function definition for 'terms'
    get.xynames: no visible global function definition for 'terms'
    get.ydata: no visible global function definition for 'terms'
    get.ydata: no visible global function definition for 'model.response'
    get.ydata: no visible global function definition for 'model.frame'
    mt.dev: no visible global function definition for 'pt'
    mt.dev.grad: no visible global function definition for 'pt'
    mt.dev.grad: no visible global function definition for 'dt'
    mt.mle: no visible global function definition for 'optim'
    multinomRob: no visible global function definition for 'var'
    plot.multinomRob: no visible global function definition for 'par'
    plot.multinomRob: no visible global function definition for 'title'
    rdirich: no visible global function definition for 'rgamma'
    residual.generator: no visible global function definition for 'median'
    rmultinomial: no visible global function definition for 'runif'
    rmultinomial: no visible global function definition for 'rbinom'
    Undefined global functions or variables:
     dt genoud median model.frame model.matrix model.response optim
     packageDescription par pt rbinom rgamma runif terms title var
    Consider adding
     importFrom("graphics", "par", "title")
     importFrom("stats", "dt", "median", "model.frame", "model.matrix",
     "model.response", "optim", "pt", "rbinom", "rgamma",
     "runif", "terms", "var")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 1.8-6.1
Check: compiled code
Result: NOTE
    File ‘multinomRob/libs/multinomRob.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.8-6.1
Check: R code for possible problems
Result: NOTE
    .onAttach: no visible global function definition for
     ‘packageDescription’
    genoudRob: no visible global function definition for ‘genoud’
    get.XYdata: no visible global function definition for ‘terms’
    get.xdata: no visible global function definition for ‘terms’
    get.xdata: no visible global function definition for ‘model.matrix’
    get.xy: no visible global function definition for ‘terms’
    get.xynames: no visible global function definition for ‘terms’
    get.ydata: no visible global function definition for ‘terms’
    get.ydata: no visible global function definition for ‘model.response’
    get.ydata: no visible global function definition for ‘model.frame’
    mt.dev: no visible global function definition for ‘pt’
    mt.dev.grad: no visible global function definition for ‘pt’
    mt.dev.grad: no visible global function definition for ‘dt’
    mt.mle: no visible global function definition for ‘optim’
    multinomRob: no visible global function definition for ‘var’
    plot.multinomRob: no visible global function definition for ‘par’
    plot.multinomRob: no visible global function definition for ‘plot’
    plot.multinomRob: no visible global function definition for ‘title’
    rdirich: no visible global function definition for ‘rgamma’
    residual.generator: no visible global function definition for ‘median’
    rmultinomial: no visible global function definition for ‘runif’
    rmultinomial: no visible global function definition for ‘rbinom’
    Undefined global functions or variables:
     dt genoud median model.frame model.matrix model.response optim
     packageDescription par plot pt rbinom rgamma runif terms title var
    Consider adding
     importFrom("graphics", "par", "plot", "title")
     importFrom("stats", "dt", "median", "model.frame", "model.matrix",
     "model.response", "optim", "pt", "rbinom", "rgamma",
     "runif", "terms", "var")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Package rgenoud

Current CRAN status: NOTE: 12

Additional issues

clang-UBSAN gcc-UBSAN

Version: 5.8-3.0
Check: R code for possible problems
Result: NOTE
    genoud: multiple local function definitions for 'fn1.bfgs' with
     different formal arguments
    genoud: multiple local function definitions for 'gr1' with different
     formal arguments
    genoud: multiple local function definitions for 'hess.fn' with
     different formal arguments
    genoud_transform: multiple local function definitions for 'fn1.bfgs'
     with different formal arguments
    genoud_transform: multiple local function definitions for 'gr1' with
     different formal arguments
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 5.8-3.0
Check: Rd cross-references
Result: NOTE
    Undeclared package ‘Matching’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang