Last updated on 2020-08-07 01:50:31 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| diffusionMap | 12 | ||
| dynparam | 12 | ||
| dynutils | 1 | 4 | 7 |
| dynwrap | 1 | 11 | |
| GillespieSSA | 12 | ||
| GillespieSSA2 | 12 | ||
| lmds | 5 | 7 | |
| princurve | 12 | ||
| qsub | 11 | ||
| SCORPIUS | 1 | 11 |
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: ERROR: 1, NOTE: 4, OK: 7
Version: 1.0.5
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘desc’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘testthat.R’ [69s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
>
> test_check("dynutils")
Loading required package: dynutils
Attaching package: 'dynutils'
The following object is masked from 'package:testthat':
has_names
── 1. Error: write_h5 and read_h5 works (@test-h5.R#11) ───────────────────────
HDF5-API H5T.c in H5Tget_class(): line 1876: not a datatype
class: HDF5
major: Invalid arguments to routine
minor: Inappropriate type
Backtrace:
1. dynutils::read_h5(file)
2. dynutils::read_h5_(file_h5)
3. hdf5r::h5attr(file_h5, "object_class")
4. attr_obj$read()
5. hdf5r:::H5ToR_Pre(mem_type, nelem)
❌ Unable to read hdf5 files
── 2. Error: test_h5_installation works (@test-h5.R#17) ───────────────────────
HDF5-API H5T.c in H5Tget_class(): line 1876: not a datatype
class: HDF5
major: Invalid arguments to routine
minor: Inappropriate type
Backtrace:
1. testthat::expect_true(test_h5_installation())
4. dynutils::test_h5_installation()
5. dynutils:::test_h5_installation_read(detailed, file)
6. base::tryCatch(...)
7. base:::tryCatchList(expr, classes, parentenv, handlers)
8. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
9. value[[3L]](cond)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 402 | SKIPPED: 0 | WARNINGS: 2 | FAILED: 2 ]
1. Error: write_h5 and read_h5 works (@test-h5.R#11)
2. Error: test_h5_installation works (@test-h5.R#17)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Current CRAN status: ERROR: 1, OK: 11
Version: 1.2.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘dyndimred’
Flavor: r-oldrel-macos-x86_64
Version: 1.2.1
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘dyndimred’
Flavor: r-oldrel-macos-x86_64
Version: 1.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [151s/149s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 1408 | SKIPPED: 1 | WARNINGS: 1 | FAILED: 2 ]
1. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
2. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-oldrel-macos-x86_64
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: NOTE: 5, OK: 7
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘Matrix’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64
Current CRAN status: OK: 12
Current CRAN status: OK: 11
Current CRAN status: ERROR: 1, OK: 11
Version: 1.0.7
Check: package dependencies
Result: ERROR
Package required but not available: ‘dynwrap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-macos-x86_64