Last updated on 2020-08-07 01:50:29 CEST.
| Package | NOTE |
|---|---|
| geneSignatureFinder | 12 |
Current CRAN status:
Version: 2014.02.17
Check: dependencies in R code
Result: NOTE
Package in Depends field not imported from: 'parallel'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 2014.02.17
Check: R code for possible problems
Result: NOTE
BICs: no visible global function definition for 'median'
BICs: no visible global function definition for 'bw.nrd0'
BICs: no visible global function definition for 'dnorm'
NCPUS: no visible global function definition for 'detectCores'
NCPUS: no visible global function definition for 'makeCluster'
bbootstrap: no visible global function definition for 'median'
checkGeneForSeed: no visible global function definition for 'pchisq'
dMixNorm: no visible global function definition for 'dnorm'
evaluateGeneSequence: no visible global function definition for
'pchisq'
importance: no visible global function definition for 'clusterExport'
importance: no visible global function definition for 'clusterEvalQ'
importance: no visible global function definition for 'parApply'
importance: no visible global function definition for 'stopCluster'
normalApproximation: no visible global function definition for 'sd'
pValueFun: no visible global function definition for 'pchisq'
pamUnbiased: no visible global function definition for 'median'
pamUnbiased: no visible global function definition for 'bw.nrd0'
parallelFindBest: no visible global function definition for 'parApply'
parallelSignatureFinder: no visible global function definition for
'pchisq'
parallelSignatureFinder: no visible global function definition for
'parApply'
parallelSignatureFinder: no visible global function definition for
'fivenum'
puttingAllTogether: no visible global function definition for
'makeCluster'
puttingAllTogether: no visible global function definition for
'dev.copy2pdf'
puttingAllTogether: no visible global function definition for 'barplot'
puttingAllTogether: no visible global function definition for
'stopCluster'
puttingAllTogether: no visible global function definition for
'write.csv'
removeGeneFrom: no visible global function definition for 'pchisq'
seedsFinder: no visible global function definition for 'clusterExport'
seedsFinder: no visible global function definition for 'clusterEvalQ'
seedsFinder: no visible global function definition for 'parApply'
seedsFinder: no visible global function definition for 'stopCluster'
sequentialSignatureFinder: no visible global function definition for
'pchisq'
sequentialSignatureFinder: no visible global function definition for
'fivenum'
signatureFinder: no visible global function definition for
'clusterExport'
signatureFinder: no visible global function definition for
'clusterEvalQ'
signatureFinder: no visible global function definition for
'stopCluster'
testGE: no visible global function definition for 'clusterExport'
testGE: no visible global function definition for 'parApply'
testGE : <anonymous>: no visible global function definition for
't.test'
testGE: no visible global function definition for 'stopCluster'
testGE: no visible global function definition for 't.test'
testGE: no visible global function definition for 'median'
Undefined global functions or variables:
barplot bw.nrd0 clusterEvalQ clusterExport detectCores dev.copy2pdf
dnorm fivenum makeCluster median parApply pchisq sd stopCluster
t.test write.csv
Consider adding
importFrom("grDevices", "dev.copy2pdf")
importFrom("graphics", "barplot")
importFrom("stats", "bw.nrd0", "dnorm", "fivenum", "median", "pchisq",
"sd", "t.test")
importFrom("utils", "write.csv")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64
Version: 2014.02.17
Check: R code for possible problems
Result: NOTE
BICs: no visible global function definition for ‘median’
BICs: no visible global function definition for ‘bw.nrd0’
BICs: no visible global function definition for ‘dnorm’
NCPUS: no visible global function definition for ‘detectCores’
NCPUS: no visible global function definition for ‘makeCluster’
bbootstrap: no visible global function definition for ‘median’
checkGeneForSeed: no visible global function definition for ‘pchisq’
dMixNorm: no visible global function definition for ‘dnorm’
evaluateGeneSequence: no visible global function definition for
‘pchisq’
importance: no visible global function definition for ‘clusterExport’
importance: no visible global function definition for ‘clusterEvalQ’
importance: no visible global function definition for ‘parApply’
importance: no visible global function definition for ‘stopCluster’
normalApproximation: no visible global function definition for ‘sd’
pValueFun: no visible global function definition for ‘pchisq’
pamUnbiased: no visible global function definition for ‘median’
pamUnbiased: no visible global function definition for ‘bw.nrd0’
parallelFindBest: no visible global function definition for ‘parApply’
parallelSignatureFinder: no visible global function definition for
‘pchisq’
parallelSignatureFinder: no visible global function definition for
‘parApply’
parallelSignatureFinder: no visible global function definition for
‘fivenum’
plot.gSignature: no visible global function definition for ‘plot’
puttingAllTogether: no visible global function definition for
‘makeCluster’
puttingAllTogether: no visible global function definition for ‘plot’
puttingAllTogether: no visible global function definition for
‘dev.copy2pdf’
puttingAllTogether: no visible global function definition for ‘barplot’
puttingAllTogether: no visible global function definition for
‘stopCluster’
puttingAllTogether: no visible global function definition for
‘write.csv’
removeGeneFrom: no visible global function definition for ‘pchisq’
seedsFinder: no visible global function definition for ‘clusterExport’
seedsFinder: no visible global function definition for ‘clusterEvalQ’
seedsFinder: no visible global function definition for ‘parApply’
seedsFinder: no visible global function definition for ‘stopCluster’
sequentialSignatureFinder: no visible global function definition for
‘pchisq’
sequentialSignatureFinder: no visible global function definition for
‘fivenum’
signatureFinder: no visible global function definition for
‘clusterExport’
signatureFinder: no visible global function definition for
‘clusterEvalQ’
signatureFinder: no visible global function definition for
‘stopCluster’
testGE: no visible global function definition for ‘clusterExport’
testGE: no visible global function definition for ‘parApply’
testGE : <anonymous>: no visible global function definition for
‘t.test’
testGE: no visible global function definition for ‘stopCluster’
testGE: no visible global function definition for ‘t.test’
testGE: no visible global function definition for ‘median’
Undefined global functions or variables:
barplot bw.nrd0 clusterEvalQ clusterExport detectCores dev.copy2pdf
dnorm fivenum makeCluster median parApply pchisq plot sd stopCluster
t.test write.csv
Consider adding
importFrom("grDevices", "dev.copy2pdf")
importFrom("graphics", "barplot", "plot")
importFrom("stats", "bw.nrd0", "dnorm", "fivenum", "median", "pchisq",
"sd", "t.test")
importFrom("utils", "write.csv")
to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64