Last updated on 2020-08-07 01:50:28 CEST.
| Package | FAIL | ERROR | NOTE | OK |
|---|---|---|---|---|
| hNMF | 1 | 11 | ||
| NMF | 1 | 4 | 7 |
Current CRAN status: FAIL: 1, OK: 11
Version: 0.9
Check: dependencies in R code
Result: FAIL
Flavor: r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, NOTE: 4, OK: 7
Version: 0.23.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘BiocManager’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.23.0
Flags: --no-vignettes
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘BiocManager’
All declared Imports should be used.
Flavor: r-patched-solaris-x86
Version: 0.23.0
Flags: --no-vignettes
Check: examples
Result: ERROR
Running examples in ‘NMF-Ex.R’ failed
The error most likely occurred in:
> ### Name: NMFfitX-class
> ### Title: Virtual Class to Handle Results from Multiple Runs of NMF
> ### Algorithms
> ### Aliases: NMFfitX-class
>
> ### ** Examples
>
> ## Don't show:
> # roxygen generated flag
> options(R_CHECK_RUNNING_EXAMPLES_=TRUE)
> ## End(Don't show)
>
> # generate a synthetic dataset with known classes
> n <- 20; counts <- c(5, 2, 3);
> V <- syntheticNMF(n, counts)
>
> # perform multiple runs of one algorithm (default is to keep only best fit)
> res <- nmf(V, 3, nrun=3)
# NOTE - CRAN check detected: limiting maximum number of cores [2/16]
Error in big.matrix(nrow = nrow(x), ncol = ncol(x), type = type, init = NULL, :
Error: memory could not be allocated for instance of type big.matrix
Calls: nmf ... gVariable -> <Anonymous> -> <Anonymous> -> big.matrix
Timing stopped at: 0.037 0.045 0.249
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.23.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘doMPI’
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64