CRAN Package Check Results for Maintainer ‘Longhai Li <longhai at math.usask.ca>’

Last updated on 2020-08-07 01:50:25 CEST.

Package NOTE OK
BCBCSF 7 5
gibbs.met 12
HTLR 3 9
predmixcor 12

Package BCBCSF

Current CRAN status: NOTE: 7, OK: 5

Version: 1.0-1
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     '.fitbcbcsf_alpha1_mu_3_n_31_p_4026_nfsel_20_biascor_1.RData'
     '.fitbcbcsf_alpha1_mu_3_n_31_p_4026_nfsel_50_biascor_1.RData'
     '.fitbcbcsf_alpha1_mu_3_n_53_p_4026_nfsel_20_biascor_1.RData'
     '.fitbcbcsf_alpha1_mu_3_n_53_p_4026_nfsel_50_biascor_1.RData'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-1
Check: compiled code
Result: NOTE
    File ‘BCBCSF/libs/BCBCSF.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package gibbs.met

Current CRAN status: NOTE: 12

Version: 1.1-3
Check: R code for possible problems
Result: NOTE
    NB: .First.lib is obsolete and will not be used in R >= 3.0.0
    File 'gibbs.met/R/firstlib.R':
     .First.lib calls:
     cat("Naive Gibbs Sampling with Metropolis steps(gibbs.met) loaded\n", "COPYRIGHT 2008 (c) Longhai Li (http://math.usask.ca/~longhai)\n", "Type ?begin.gibbs.met for help to this package\n", sep = "")
    
    Package startup functions should use 'packageStartupMessage' to
     generate messages.
    See section 'Good practice' in '?.onAttach'.
    
    met_gaussian : one_transition: no visible global function definition
     for 'rnorm'
    met_gaussian : one_transition: no visible global function definition
     for 'runif'
    Undefined global functions or variables:
     rnorm runif
    Consider adding
     importFrom("stats", "rnorm", "runif")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-3
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'mc_mvn_closemix.eps' 'mc_mvn_farmix_met.eps' 'mc_mvn_lowcor.eps'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Package HTLR

Current CRAN status: NOTE: 3, OK: 9

Version: 0.4-2
Check: installed package size
Result: NOTE
     installed size is 5.9Mb
     sub-directories of 1Mb or more:
     doc 1.0Mb
     libs 3.7Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-x86_64, r-oldrel-macos-x86_64

Package predmixcor

Current CRAN status: NOTE: 12

Version: 1.1-1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-1
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     'DESCRIPTION.bck'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1-1
Check: R code for possible problems
Result: NOTE
    NB: .First.lib is obsolete and will not be used in R >= 3.0.0
    File 'predmixcor/R/firstlib.r':
     .First.lib calls:
     cat("predmixcor loaded\n", "COPY RIGHT: Longhai Li\n", "http://math.usask.ca/~longhai\n", "Type ?begin.predmixcor for help\n", sep = "")
    
    Package startup functions should use 'packageStartupMessage' to
     generate messages.
    See section 'Good practice' in '?.onAttach'.
    
    Predict.mix: no visible global function definition for 'dbinom'
    abs_cor: no visible global function definition for 'cor'
    gen.alpha.IGamma: no visible global function definition for 'qgamma'
    gendata.mix: no visible global function definition for 'runif'
    gendata.mix: no visible global function definition for 'rbeta'
    mh1.unif: no visible global function definition for 'runif'
    train_predict_mix: no visible global function definition for 'dbinom'
    training: no visible global function definition for 'runif'
    training: no visible global function definition for 'dbinom'
    Undefined global functions or variables:
     cor dbinom qgamma rbeta runif
    Consider adding
     importFrom("stats", "cor", "dbinom", "qgamma", "rbeta", "runif")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64