CRAN Package Check Results for Maintainer ‘Lane F. Burgette <lb131 at stat.duke.edu>’

Last updated on 2020-08-07 01:50:25 CEST.

Package NOTE
endogMNP 12
factorQR 12

Package endogMNP

Current CRAN status:

Version: 0.2-1
Check: R code for possible problems
Result: NOTE
    File 'endogMNP/R/onAttach.R':
     .onAttach calls:
     cat(paste(pkg, ": ", title, "\nVersion: ", ver, "\n", sep = ""))
    
    Package startup functions should use 'packageStartupMessage' to
     generate messages.
    See section 'Good practice' in '?.onAttach'.
    
    XandYmatrix.endogMNP: warning in matrix(NA, nc = p1, nr = length(Y1)):
     partial argument match of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(NA, nc = p1, nr = length(Y1)):
     partial argument match of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(cbind(Y1, naMat), nc = p1 + 1):
     partial argument match of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(Y, nc = 1, byrow = TRUE):
     partial argument match of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(0, nr = ((p1 - 1 + (p1 - 1) *
     (p2 - 1)) * length(Y1)), nc = ((length(selX[1, ])) * (p1 - 1) +
     (length(outX[1, ])) * (p1 - 1) * (p2 - 1))): partial argument match
     of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(0, nr = ((p1 - 1 + (p1 - 1) *
     (p2 - 1)) * length(Y1)), nc = ((length(selX[1, ])) * (p1 - 1) +
     (length(outX[1, ])) * (p1 - 1) * (p2 - 1))): partial argument match
     of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(0, nr = ((p1 - 1 + p1 * (p2 -
     1)) * length(Y1)), nc = ((length(selX[1, ])) * (p1 - 1) +
     (length(outX[1, ])) * p1 * (p2 - 1))): partial argument match of 'nr'
     to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(0, nr = ((p1 - 1 + p1 * (p2 -
     1)) * length(Y1)), nc = ((length(selX[1, ])) * (p1 - 1) +
     (length(outX[1, ])) * p1 * (p2 - 1))): partial argument match of 'nc'
     to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(selX[i, ], nr = 1): partial
     argument match of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(outX[i, ], nr = 1): partial
     argument match of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(0, nr = dim(selPart)[1], nc =
     dim(outPart)[2]): partial argument match of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(0, nr = dim(selPart)[1], nc =
     dim(outPart)[2]): partial argument match of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(0, nr = dim(outPart)[1], nc =
     dim(selPart)[2]): partial argument match of 'nr' to 'nrow'
    XandYmatrix.endogMNP: warning in matrix(0, nr = dim(outPart)[1], nc =
     dim(selPart)[2]): partial argument match of 'nc' to 'ncol'
    XandYmatrix.endogMNP: warning in matrix(xMatrix, nc = 1, byrow = TRUE):
     partial argument match of 'nc' to 'ncol'
    endogMNP : captureFormula: warning in match.call(expand = FALSE):
     partial argument match of 'expand' to 'expand.dots'
    .onAttach: no visible global function definition for
     'packageDescription'
    XandYmatrix.endogMNP: no visible global function definition for
     'relevel'
    endogMNP: no visible global function definition for 'model.response'
    endogMNP: no visible global function definition for 'model.frame'
    endogMNP: no visible global function definition for
     'model.matrix.default'
    print.summary.endogMNP: no visible global function definition for
     'printCoefmat'
    summary.endogMNP: no visible binding for global variable 'sd'
    summary.endogMNP: no visible binding for global variable 'quantile'
    Undefined global functions or variables:
     model.frame model.matrix.default model.response packageDescription
     printCoefmat quantile relevel sd
    Consider adding
     importFrom("stats", "model.frame", "model.matrix.default",
     "model.response", "printCoefmat", "quantile", "relevel",
     "sd")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-1
Check: compiled code
Result: NOTE
    File ‘endogMNP/libs/endogMNP.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package factorQR

Current CRAN status:

Version: 0.1-4
Check: R code for possible problems
Result: NOTE
    bayesQR : captureFormula: warning in match.call(expand = FALSE):
     partial argument match of 'expand' to 'expand.dots'
    bayesQR: warning in matrix(beta, nc = 1): partial argument match of
     'nc' to 'ncol'
    factorQR : captureFormula: warning in match.call(expand = FALSE):
     partial argument match of 'expand' to 'expand.dots'
    factorQR: warning in matrix(rnorm(nObs * nFact), nr = nObs): partial
     argument match of 'nr' to 'nrow'
    factorQR: warning in matrix(0, nr = nFact + xBetLen + numManInd, nc =
     nFact + xBetLen + numManInd): partial argument match of 'nr' to
     'nrow'
    factorQR: warning in matrix(0, nr = nFact + xBetLen + numManInd, nc =
     nFact + xBetLen + numManInd): partial argument match of 'nc' to
     'ncol'
    factorQR: warning in matrix(0, nr = nFact + xBetLen + 1, nc = nFact +
     xBetLen + 1): partial argument match of 'nr' to 'nrow'
    factorQR: warning in matrix(0, nr = nFact + xBetLen + 1, nc = nFact +
     xBetLen + 1): partial argument match of 'nc' to 'ncol'
    factorQR: warning in matrix(0, nr = xLength, nc = nFact): partial
     argument match of 'nr' to 'nrow'
    factorQR: warning in matrix(0, nr = xLength, nc = nFact): partial
     argument match of 'nc' to 'ncol'
    makeData: warning in matrix(0, nr = xLength, nc = nFact): partial
     argument match of 'nr' to 'nrow'
    makeData: warning in matrix(0, nr = xLength, nc = nFact): partial
     argument match of 'nc' to 'ncol'
    makeData: warning in matrix(rnorm(N * nFact), nc = nFact): partial
     argument match of 'nc' to 'ncol'
    makeData: warning in matrix(rnorm(N * xLength), nc = xLength): partial
     argument match of 'nc' to 'ncol'
    plot.bayesQR: warning in matrix(sampledVals, nc = 1): partial argument
     match of 'nc' to 'ncol'
    plot.factorQR: warning in matrix(sampledVals, nc = 1): partial argument
     match of 'nc' to 'ncol'
    bayesQR: no visible global function definition for 'model.response'
    bayesQR: no visible global function definition for
     'model.matrix.default'
    factorQR: no visible global function definition for 'model.response'
    factorQR: no visible global function definition for
     'model.matrix.default'
    factorQR: no visible binding for global variable 'sd'
    factorQR: no visible global function definition for 'rnorm'
    makeData : ralap: no visible global function definition for 'runif'
    makeData: no visible global function definition for 'rnorm'
    print.summary.bayesQR: no visible global function definition for
     'printCoefmat'
    print.summary.factorQR: no visible global function definition for
     'printCoefmat'
    summary.bayesQR: no visible binding for global variable 'sd'
    summary.bayesQR: no visible binding for global variable 'quantile'
    summary.factorQR: no visible binding for global variable 'sd'
    summary.factorQR: no visible binding for global variable 'quantile'
    Undefined global functions or variables:
     model.matrix.default model.response printCoefmat quantile rnorm runif
     sd
    Consider adding
     importFrom("stats", "model.matrix.default", "model.response",
     "printCoefmat", "quantile", "rnorm", "runif", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1-4
Check: compiled code
Result: NOTE
    File ‘factorQR/libs/factorQR.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc