Last updated on 2020-08-07 01:50:23 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| EpiSignalDetection | 3 | 2 | 7 |
Current CRAN status: ERROR: 3, NOTE: 2, OK: 7
Version: 0.1.1
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘ggplot2’ ‘knitr’ ‘pander’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.1.1
Check: examples
Result: ERROR
Running examples in ‘EpiSignalDetection-Ex.R’ failed
The error most likely occurred in:
> ### Name: runEpiSDReport
> ### Title: Run the EpiSignalDetection report (HTML markdown)
> ### Aliases: runEpiSDReport
>
> ### ** Examples
>
> #---> OR
>
> #-- First setting the parameters to run the report for
> input <- list(
+ disease = "Salmonellosis",
+ country = "Portugal",
+ indicator = "Reported cases",
+ stratification = "Confirmed cases",
+ unit = "Month",
+ daterange = c("2011-01-01", "2016-12-31"),
+ algo = "FarringtonFlexible",
+ testingperiod = 6
+ )
>
> #-- Second running the report based on the EpiSignalDetection::SignalData dataset
> #-- and store it in a temporary folder
> runEpiSDReport(input = input)
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Execution halted
Flavors: r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64