Last updated on 2020-08-07 01:50:23 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| cooccurNet | 1 | 8 | 3 |
Current CRAN status: ERROR: 1, NOTE: 8, OK: 3
Version: 0.1.6
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
'cooccurNetwork' 'memory.limits'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.6
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘knitr’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.1.6
Check: examples
Result: ERROR
Running examples in ‘cooccurNet-Ex.R’ failed
The error most likely occurred in:
> ### Name: coocnet
> ### Title: coocnet
> ### Aliases: coocnet
>
> ### ** Examples
>
> cooccurNetwork = coocnet(dataFile=getexample(dataType="protein"), dataType="protein")
reading file......
completed. (10,329)
preprocess file......Error in if (pred >= memsize * alpha || ncol > 150 || (nrow > 30000 & :
missing value where TRUE/FALSE needed
Calls: coocnet ... cooccur.dataprepreprocess.preprocess -> inmemoryflag
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘Extending-cooccurNet.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
Quitting from lines 176-178 (Extending-cooccurNet.Rmd)
Error: processing vignette 'Extending-cooccurNet.Rmd' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘Extending-cooccurNet.Rmd’
SUMMARY: processing the following file failed:
‘Extending-cooccurNet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.6
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
‘memory.limits’
Flavor: r-patched-solaris-x86