CRAN Package Check Results for Maintainer ‘Hajime Uno <huno at jimmy.harvard.edu>’

Last updated on 2020-08-07 01:50:21 CEST.

Package NOTE OK
survC1 12
survIDINRI 12
survRM2 12

Package survC1

Current CRAN status: NOTE: 12

Version: 1.0-2
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: 'survival'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-2
Check: R code for possible problems
Result: NOTE
    Est.PH: no visible global function definition for 'coxph'
    Inf.Cval: no visible global function definition for 'rexp'
    Inf.Cval: no visible global function definition for 'var'
    Inf.Cval.Delta: no visible global function definition for 'rexp'
    Inf.Cval.Delta: no visible global function definition for 'var'
    cvC: no visible global function definition for 'coxph'
    cvC: no visible global function definition for 'weighted.mean'
    Undefined global functions or variables:
     coxph rexp var weighted.mean
    Consider adding
     importFrom("stats", "rexp", "var", "weighted.mean")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-2
Check: Rd files
Result: NOTE
    prepare_Rd: Est.Cval.Rd:21-23: Dropping empty section \details
    prepare_Rd: Est.Cval.Rd:37-39: Dropping empty section \note
    prepare_Rd: Est.Cval.Rd:34-36: Dropping empty section \author
    prepare_Rd: Est.Cval.Rd:31-33: Dropping empty section \references
    prepare_Rd: Est.Cval.Rd:43-45: Dropping empty section \seealso
    prepare_Rd: Est.PH.Rd:18-20: Dropping empty section \details
    prepare_Rd: Est.PH.Rd:33-35: Dropping empty section \note
    prepare_Rd: Est.PH.Rd:30-32: Dropping empty section \author
    prepare_Rd: Est.PH.Rd:27-29: Dropping empty section \references
    prepare_Rd: Est.PH.Rd:39-41: Dropping empty section \seealso
    prepare_Rd: Inf.Cval.Delta.Rd:27-29: Dropping empty section \details
    prepare_Rd: Inf.Cval.Delta.Rd:38-40: Dropping empty section \note
    prepare_Rd: Inf.Cval.Delta.Rd:35-37: Dropping empty section \author
    prepare_Rd: Inf.Cval.Delta.Rd:32-34: Dropping empty section \references
    prepare_Rd: Inf.Cval.Delta.Rd:44-46: Dropping empty section \seealso
    prepare_Rd: Inf.Cval.Rd:24-26: Dropping empty section \details
    prepare_Rd: Inf.Cval.Rd:40-42: Dropping empty section \note
    prepare_Rd: Inf.Cval.Rd:37-39: Dropping empty section \author
    prepare_Rd: Inf.Cval.Rd:34-36: Dropping empty section \references
    prepare_Rd: Inf.Cval.Rd:46-48: Dropping empty section \seealso
    prepare_Rd: VEC2MAT.Rd:19-21: Dropping empty section \details
    prepare_Rd: VEC2MAT.Rd:22-28: Dropping empty section \value
    prepare_Rd: VEC2MAT.Rd:35-37: Dropping empty section \note
    prepare_Rd: VEC2MAT.Rd:32-34: Dropping empty section \author
    prepare_Rd: VEC2MAT.Rd:29-31: Dropping empty section \references
    prepare_Rd: VEC2MAT.Rd:41-43: Dropping empty section \seealso
    prepare_Rd: VEC2MAT.Rd:44-45: Dropping empty section \examples
    prepare_Rd: conc.Rd:22-24: Dropping empty section \details
    prepare_Rd: conc.Rd:25-31: Dropping empty section \value
    prepare_Rd: conc.Rd:38-40: Dropping empty section \note
    prepare_Rd: conc.Rd:35-37: Dropping empty section \author
    prepare_Rd: conc.Rd:32-34: Dropping empty section \references
    prepare_Rd: conc.Rd:44-46: Dropping empty section \seealso
    prepare_Rd: conc.Rd:47-49: Dropping empty section \examples
    prepare_Rd: cvC.Rd:24-26: Dropping empty section \details
    prepare_Rd: cvC.Rd:27-31: Dropping empty section \value
    prepare_Rd: cvC.Rd:38-40: Dropping empty section \note
    prepare_Rd: cvC.Rd:35-37: Dropping empty section \author
    prepare_Rd: cvC.Rd:32-34: Dropping empty section \references
    prepare_Rd: kmcens.Rd:22-24: Dropping empty section \details
    prepare_Rd: kmcens.Rd:25-31: Dropping empty section \value
    prepare_Rd: kmcens.Rd:38-40: Dropping empty section \note
    prepare_Rd: kmcens.Rd:35-37: Dropping empty section \author
    prepare_Rd: kmcens.Rd:32-34: Dropping empty section \references
    prepare_Rd: kmcens.Rd:44-46: Dropping empty section \seealso
    prepare_Rd: kmcens.Rd:47-49: Dropping empty section \examples
    prepare_Rd: unoCW.Rd:31-33: Dropping empty section \details
    prepare_Rd: unoCW.Rd:34-40: Dropping empty section \value
    prepare_Rd: unoCW.Rd:47-49: Dropping empty section \note
    prepare_Rd: unoCW.Rd:44-46: Dropping empty section \author
    prepare_Rd: unoCW.Rd:41-43: Dropping empty section \references
    prepare_Rd: unoCW.Rd:53-55: Dropping empty section \seealso
    prepare_Rd: unoCW.Rd:56-57: Dropping empty section \examples
    prepare_Rd: unoU2P.Rd:18-20: Dropping empty section \details
    prepare_Rd: unoU2P.Rd:21-27: Dropping empty section \value
    prepare_Rd: unoU2P.Rd:34-36: Dropping empty section \note
    prepare_Rd: unoU2P.Rd:31-33: Dropping empty section \author
    prepare_Rd: unoU2P.Rd:28-30: Dropping empty section \references
    prepare_Rd: unoU2P.Rd:40-42: Dropping empty section \seealso
    prepare_Rd: unoU2P.Rd:43-44: Dropping empty section \examples
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-2
Check: compiled code
Result: NOTE
    File ‘survC1/libs/survC1.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package survIDINRI

Current CRAN status: NOTE: 12

Version: 1.1-1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     'survC1' 'survival'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-1
Check: R code for possible problems
Result: NOTE
    Est.HR.FUN: no visible global function definition for 'coxph'
    Est.HR.FUN: no visible global function definition for 'basehaz'
    Est.HR.FUN: no visible global function definition for 'approx'
    Ghat.FUN: no visible global function definition for 'survfit'
    IDI.INF: no visible global function definition for 'kmcens'
    IDI.INF: no visible global function definition for 'quantile'
    IDI.INF.GRAPH: no visible global function definition for 'lines'
    IDI.INF.GRAPH: no visible global function definition for 'abline'
    IDI.INF.GRAPH: no visible global function definition for 'points'
    IDI.INF.GRAPH: no visible global function definition for 'title'
    PTB.IDI.FUN: no visible global function definition for 'rexp'
    shade: no visible global function definition for 'polygon'
    Undefined global functions or variables:
     abline approx basehaz coxph kmcens lines points polygon quantile rexp
     survfit title
    Consider adding
     importFrom("graphics", "abline", "lines", "points", "polygon", "title")
     importFrom("stats", "approx", "quantile", "rexp")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 1.1-1
Check: Rd line widths
Result: NOTE
    Rd file 'IDI.INF.GRAPH.Rd':
     \usage lines wider than 90 characters:
     IDI.INF.GRAPH(x, main = NULL, xlab = NULL, ylab = NULL, cex.main = NULL, cex.lab = NULL, ...)
    
    Rd file 'IDI.INF.Rd':
     \usage lines wider than 90 characters:
     IDI.INF(indata, covs0, covs1, t0, npert = 300, npert.rand = NULL, seed1 = NULL, alpha = 0.05)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1-1
Check: compiled code
Result: NOTE
    File ‘survIDINRI/libs/survIDINRI.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1-1
Check: R code for possible problems
Result: NOTE
    Est.HR.FUN: no visible global function definition for ‘coxph’
    Est.HR.FUN: no visible global function definition for ‘basehaz’
    Est.HR.FUN: no visible global function definition for ‘approx’
    Ghat.FUN: no visible global function definition for ‘survfit’
    IDI.INF: no visible global function definition for ‘kmcens’
    IDI.INF: no visible global function definition for ‘quantile’
    IDI.INF.GRAPH: no visible global function definition for ‘plot’
    IDI.INF.GRAPH: no visible global function definition for ‘lines’
    IDI.INF.GRAPH: no visible global function definition for ‘abline’
    IDI.INF.GRAPH: no visible global function definition for ‘points’
    IDI.INF.GRAPH: no visible global function definition for ‘title’
    PTB.IDI.FUN: no visible global function definition for ‘rexp’
    shade: no visible global function definition for ‘polygon’
    Undefined global functions or variables:
     abline approx basehaz coxph kmcens lines plot points polygon quantile
     rexp survfit title
    Consider adding
     importFrom("graphics", "abline", "lines", "plot", "points", "polygon",
     "title")
     importFrom("stats", "approx", "quantile", "rexp")
    to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Package survRM2

Current CRAN status: OK: 12